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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of wound healing
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Accession:GO:0061041 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.


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regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle IMP RGD PMID:24204762 RGD:12879446 NCBI chr 1:252,537,614...252,550,394
Ensembl chr 1:252,537,615...252,550,394
JBrowse link
G Cadm4 cell adhesion molecule 4 ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:6271409|PMID:25893857)
(PMID:25893857)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25893857 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6271409 NCBI chr 1:81,365,200...81,369,841
Ensembl chr 1:81,365,138...81,370,109
JBrowse link
G Crk CRK proto-oncogene, adaptor protein NOT ISO (PMID:17515907) RGD PMID:17515907 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO
ISS
(PMID:24440982)
GO_REF:0000024
RGD
UniProt
PMID:24440982 GO_REF:0000024 NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
JBrowse link
G Tnfrsf12a TNF receptor superfamily member 12A ISO (PMID:11728344) RGD PMID:11728344 NCBI chr10:12,995,904...12,997,930
Ensembl chr10:12,995,904...12,997,930
JBrowse link
G Vil1 villin 1 ISO (MGI:MGI:5009178|PMID:12937273) RGD PMID:12937273 MGI:MGI:5009178 NCBI chr 9:81,689,802...81,717,623
Ensembl chr 9:81,689,802...81,717,621
JBrowse link
activation of blood coagulation via clotting cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 ISO (PMID:21107324) RGD PMID:21107324 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
canonical Wnt signaling pathway involved in positive regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plpp3 phospholipid phosphatase 3 ISO
IEA
(PMID:20123964)
GO_REF:0000107
RGD
Ensembl
PMID:20123964 GO_REF:0000107 NCBI chr 5:124,690,214...124,765,499
Ensembl chr 5:124,690,214...124,765,498
JBrowse link
fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO MGI:MGI:3028929 (MGI:MGI:3027337|PMID:14702107) RGD PMID:14702107 MGI:MGI:3027337 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Cpb2 carboxypeptidase B2 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:11848438, PMID:21873635 RGD:632532, RGD:13792537 NCBI chr15:57,290,849...57,339,762
Ensembl chr15:57,290,849...57,339,760
JBrowse link
G F12 coagulation factor XII IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:9,736,577...9,744,420
Ensembl chr17:9,736,577...9,744,420
JBrowse link
G F2 coagulation factor II IEA
ISO
GO_REF:0000107
(PMID:12855810)
Ensembl
RGD
PMID:12855810 GO_REF:0000107 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Fga fibrinogen alpha chain ISO
IBA
IEA
(PMID:16846481)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:16846481, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:181,997,562...182,013,726
Ensembl chr 2:182,006,242...182,013,763
JBrowse link
G Fgb fibrinogen beta chain ISO (PMID:16846481) RGD PMID:16846481 NCBI chr 2:182,028,044...182,035,026
Ensembl chr 2:182,027,115...182,038,178
JBrowse link
G Fgg fibrinogen gamma chain ISO (PMID:16846481) RGD PMID:16846481 NCBI chr 2:181,987,080...181,994,523
Ensembl chr 2:181,987,217...181,994,514
JBrowse link
G Gp1ba glycoprotein Ib platelet subunit alpha ISO (PMID:12855810) RGD PMID:12855810 NCBI chr10:57,260,680...57,263,546
Ensembl chr10:57,260,680...57,263,546
JBrowse link
G Hrg histidine-rich glycoprotein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G Klkb1 kallikrein B1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:50,151,127...50,175,407
Ensembl chr16:50,152,008...50,175,458
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr11:81,621,283...81,639,952 JBrowse link
G Plau plasminogen activator, urokinase ISO
IBA
IEA
(MGI:MGI:1277054|PMID:9733098)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:9733098, PMID:21873635 GO_REF:0000107, MGI:MGI:1277054, RGD:13792537 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819
JBrowse link
G Plg plasminogen IEA
ISO
GO_REF:0000104
(PMID:14688145), (PMID:17307854), (PMID:22025510)
UniProt
RGD
PMID:14688145, PMID:17307854, PMID:22025510 GO_REF:0000104 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
G Pros1 protein S IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:1,206,648...1,288,140
Ensembl chr 7:1,206,648...1,288,134
JBrowse link
G Serping1 serpin family G member 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:72,161,230...72,171,109
Ensembl chr 3:72,161,189...72,171,078
JBrowse link
negative regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein IEA
ISO
GO_REF:0000107
(PMID:21868574)
Ensembl
RGD
PMID:21868574 GO_REF:0000107 NCBI chr17:22,619,913...22,688,296
Ensembl chr17:22,619,891...22,688,307
JBrowse link
G Anxa5 annexin A5 IDA RGD PMID:20684318 RGD:7241850 NCBI chr 2:123,162,477...123,194,730
Ensembl chr 2:123,162,461...123,193,130
JBrowse link
G Apoe apolipoprotein E ISO (PMID:8995232) RGD PMID:8995232 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apoh apolipoprotein H ISO
IEA
(PMID:4052628)
GO_REF:0000107
RGD
Ensembl
PMID:4052628 GO_REF:0000107 NCBI chr10:96,640,013...96,653,939
Ensembl chr10:96,639,924...96,653,938
JBrowse link
G Cd34 CD34 molecule ISO
ISS
(PMID:17505307)
GO_REF:0000024
RGD
UniProt
PMID:17505307 GO_REF:0000024 NCBI chr13:113,691,842...113,711,259
Ensembl chr13:113,691,932...113,711,647
JBrowse link
G Kng1 kininogen 1 IBA
IEA
PMID:21873635
GO_REF:0000107
Ensembl PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr11:81,421,672...81,444,466
Ensembl chr11:81,421,676...81,444,621
JBrowse link
G Kng2 kininogen 2 ISO
IBA
(PMID:11970955)
PMID:21873635
RGD PMID:11970955, PMID:21873635 RGD:13792537 NCBI chr11:81,509,185...81,516,759 JBrowse link
G Kng2l1 kininogen 2-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Proc protein C, inactivator of coagulation factors Va and VIIIa IDA
ISO
IBA
MGI:MGI:2183063 (MGI:MGI:1261704|PMID:9616155), (MGI:MGI:1306904|PMID:9788960)
PMID:21873635
RGD PMID:9616155, PMID:9788960, PMID:1440533, PMID:21873635 MGI:MGI:1261704, MGI:MGI:1306904, RGD:11100042, RGD:13792537 NCBI chr18:24,918,402...24,928,822
Ensembl chr18:24,918,398...24,929,091
JBrowse link
G Serpine2 serpin family E member 2 ISO
IDA
(PMID:17379830) RGD PMID:17379830, PMID:17379830 RGD:8553298 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
G Tfpi tissue factor pathway inhibitor ISO (PMID:21868574) RGD PMID:21868574 NCBI chr 3:71,852,738...71,902,127
Ensembl chr 3:71,852,744...71,893,618
JBrowse link
G Thbd thrombomodulin IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:142,748,673...142,752,325
Ensembl chr 3:142,748,674...142,752,325
JBrowse link
G Tspan8 tetraspanin 8 IDA RGD PMID:9531564 RGD:634231 NCBI chr 7:58,814,805...58,847,564
Ensembl chr 7:58,814,805...58,847,563
JBrowse link
negative regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H ISO
IEA
(PMID:14726399)
GO_REF:0000107
RGD
Ensembl
PMID:14726399 GO_REF:0000107 NCBI chr10:96,640,013...96,653,939
Ensembl chr10:96,639,924...96,653,938
JBrowse link
G Cpb2 carboxypeptidase B2 IDA RGD PMID:17002650 RGD:2313647 NCBI chr15:57,290,849...57,339,762
Ensembl chr15:57,290,849...57,339,760
JBrowse link
G Hrg histidine-rich glycoprotein ISO
IBA
MGI:MGI:3789962 (MGI:MGI:3789419|PMID:15869579)
PMID:21873635
RGD PMID:15869579, PMID:21873635 MGI:MGI:3789419, RGD:13792537 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:81,621,283...81,639,952 JBrowse link
G Plg plasminogen ISO (PMID:14726399) RGD PMID:14726399 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
G Serpine1 serpin family E member 1 ISO
IEA
(PMID:2503541)
GO_REF:0000107
RGD
Ensembl
PMID:2503541 GO_REF:0000107 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Serpinf2 serpin family F member 2 IMP
ISO
(PMID:134998) RGD PMID:134998, PMID:6506034 RGD:1625541 NCBI chr10:62,264,247...62,272,353
Ensembl chr10:62,264,788...62,273,119
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:6438154) RGD PMID:6438154 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
negative regulation of platelet activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO
IEA
(PMID:8995232)
GO_REF:0000107
RGD
Ensembl
PMID:8995232 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G C1qtnf1 C1q and TNF related 1 ISO (PMID:16195328) RGD PMID:16195328 NCBI chr10:107,455,845...107,477,160
Ensembl chr10:107,455,845...107,477,162
JBrowse link
G Gp5 glycoprotein V (platelet) ISO MGI:MGI:2652408 (MGI:MGI:1347746|PMID:10557321), (MGI:MGI:2137180|PMID:11435305) RGD PMID:10557321, PMID:11435305 MGI:MGI:1347746, MGI:MGI:2137180 NCBI chr11:73,015,380...73,017,570 JBrowse link
G Pdgfa platelet derived growth factor subunit A ISO
ISS
IEA
(PMID:2538439)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:2538439 GO_REF:0000024, GO_REF:0000107 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO
ISS
IEA
(PMID:2538439)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:2538439 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO
IEA
ISS
(PMID:8188664)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:8188664 GO_REF:0000024, GO_REF:0000107 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Serpine2 serpin family E member 2 ISO MGI:MGI:2387774 (MGI:MGI:4418017|PMID:19855083) RGD PMID:19855083 MGI:MGI:4418017 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
negative regulation of platelet aggregation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:12742000 RGD:10047059 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 ISO (MGI:MGI:3848389|PMID:19218546)
(PMID:19218546)
RGD PMID:19218546 MGI:MGI:3848389 NCBI chr19:46,005,055...46,167,912
Ensembl chr19:46,005,277...46,101,250
JBrowse link
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:6140045 RGD:8548522 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Alox12 arachidonate 12-lipoxygenase, 12S type ISO
ISS
(MGI:MGI:1202206|PMID:9501222)
GO_REF:0000024
RGD
UniProt
PMID:9501222 GO_REF:0000024, MGI:MGI:1202206 NCBI chr10:56,851,734...56,864,049
Ensembl chr10:56,851,734...56,864,005
JBrowse link
G C1qtnf1 C1q and TNF related 1 IEA
ISO
GO_REF:0000107
(PMID:16195328)
Ensembl
RGD
PMID:16195328 GO_REF:0000107 NCBI chr10:107,455,845...107,477,160
Ensembl chr10:107,455,845...107,477,162
JBrowse link
G Cd9 CD9 molecule ISO
ISS
(PMID:18541721)
GO_REF:0000024
RGD
UniProt
PMID:18541721 GO_REF:0000024 NCBI chr 4:157,977,163...158,010,091
Ensembl chr 4:157,977,162...158,010,166
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO
ISS
(MGI:MGI:3835235|PMID:19008452)
GO_REF:0000024
RGD
UniProt
PMID:19008452 GO_REF:0000024, MGI:MGI:3835235 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Fgg fibrinogen gamma chain IDA RGD PMID:22985603 RGD:11352706 NCBI chr 2:181,987,080...181,994,523
Ensembl chr 2:181,987,217...181,994,514
JBrowse link
G Prkcd protein kinase C, delta IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3813784|PMID:16940418)
Ensembl
UniProt
RGD
PMID:16940418 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3813784 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO (PMID:16990611) RGD PMID:16990611 NCBI chr 1:248,982,039...250,300,952 JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:20303752 RGD:10043327 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
G Serpine2 serpin family E member 2 ISO
IEA
(MGI:MGI:4418017|PMID:19855083)
GO_REF:0000107
RGD
Ensembl
PMID:19855083 GO_REF:0000107, MGI:MGI:4418017 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
G Sh2b3 SH2B adaptor protein 3 ISO
IEA
UniProtKB:P35951 (MGI:MGI:5905608|PMID:27430239)
GO_REF:0000107
RGD
Ensembl
PMID:27430239 GO_REF:0000107, MGI:MGI:5905608 NCBI chr12:40,261,990...40,265,757
Ensembl chr12:40,244,081...40,265,757
JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing, B ISO (MGI:MGI:4838721|PMID:20585042) RGD PMID:20585042 MGI:MGI:4838721 NCBI chr 8:45,224,053...45,375,450
Ensembl chr 8:45,223,992...45,375,435
JBrowse link
negative regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myoz1 myozenin 1 ISO (MGI:MGI:3831256|PMID:18846255) RGD PMID:18846255 MGI:MGI:3831256 NCBI chr15:4,077,066...4,084,306
Ensembl chr15:4,077,091...4,084,314
JBrowse link
negative regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:5562469|PMID:24226420)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24226420 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5562469 NCBI chr 4:148,398,004...148,446,308
Ensembl chr 4:148,398,892...148,446,303
JBrowse link
G Serpine1 serpin family E member 1 ISO
IEA
UniProtKB:P22777 (PMID:9386191)
GO_REF:0000107
(MGI:MGI:1100384|PMID:9386191)
RGD
Ensembl
PMID:9386191 GO_REF:0000107, MGI:MGI:1100384 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:MGI:6392927|PMID:28577991) RGD PMID:28577991 MGI:MGI:6392927 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
G Tafa5 TAFA chemokine like family member 5 ISO (MGI:MGI:6380922|PMID:29453251) RGD PMID:29453251 MGI:MGI:6380922 NCBI chr 7:128,500,009...128,728,834
Ensembl chr 7:128,500,011...128,728,928
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:22499991) RGD PMID:22499991 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:20410530 RGD:12790978 NCBI chr 1:102,110,708...102,191,287
Ensembl chr 1:102,110,708...102,191,287
JBrowse link
G Ajap1 adherens junctions associated protein 1 IEA
ISO
GO_REF:0000107
(PMID:16410724)
Ensembl
RGD
PMID:16410724 GO_REF:0000107 NCBI chr 5:170,615,885...170,679,315
Ensembl chr 5:170,615,886...170,679,315
JBrowse link
G Alox5 arachidonate 5-lipoxygenase ISS
ISO
GO_REF:0000024
(MGI:MGI:5562469|PMID:24226420), (MGI:MGI:6392964|PMID:28965882)
UniProt
RGD
PMID:24226420, PMID:28965882 GO_REF:0000024, MGI:MGI:5562469, MGI:MGI:6392964 NCBI chr 4:148,398,004...148,446,308
Ensembl chr 4:148,398,892...148,446,303
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO (PMID:18664494) RGD PMID:18664494 NCBI chr  X:9,815,652...10,156,155
Ensembl chr  X:9,815,652...10,156,155
JBrowse link
G Cd109 CD109 molecule ISO (PMID:16754747) RGD PMID:16754747 NCBI chr 8:85,951,420...86,065,411
Ensembl chr 8:85,951,191...86,065,409
JBrowse link
G Cldn19 claudin 19 ISO (PMID:27593915) RGD PMID:27593915 NCBI chr 5:138,300,692...138,307,982
Ensembl chr 5:138,300,107...138,305,683
JBrowse link
G Cldn3 claudin 3 ISO (PMID:27593915) RGD PMID:27593915 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Crk CRK proto-oncogene, adaptor protein ISO (PMID:17515907) RGD PMID:17515907 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Eppk1 epiplakin 1 ISO (PMID:23398049)
(MGI:MGI:5816446|PMID:20926261)
RGD PMID:20926261, PMID:23398049 MGI:MGI:5816446 NCBI chr 7:117,163,383...117,173,741 JBrowse link
G Fgf2 fibroblast growth factor 2 ISO (PMID:19577615) RGD PMID:19577615 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:18172080 RGD:8662378 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19578821 RGD:5508683 NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654
JBrowse link
G Muc16 mucin 16, cell surface associated ISO MGI:MGI:3840843 (MGI:MGI:5754666|PMID:24812549) RGD PMID:24812549 MGI:MGI:5754666 NCBI chr 8:18,438,838...18,639,777 JBrowse link
G Smad3 SMAD family member 3 ISO (MGI:MGI:1352043|PMID:10559937), (MGI:MGI:5284806|PMID:14617288), (MGI:MGI:5285145|PMID:21035443) RGD PMID:10559937, PMID:14617288, PMID:21035443 MGI:MGI:1352043, MGI:MGI:5284806, MGI:MGI:5285145 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Wfdc1 WAP four-disulfide core domain 1 ISO MGI:MGI:5609943 (MGI:MGI:5608711|PMID:25219356) RGD PMID:25219356 MGI:MGI:5608711 NCBI chr19:52,313,771...52,332,721
Ensembl chr19:52,313,795...52,332,697
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
UniProtKB:P01112 (MGI:MGI:5487484|PMID:23027131)
GO_REF:0000107
RGD
Ensembl
PMID:23027131 GO_REF:0000107, MGI:MGI:5487484 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 ISO
IEA
(PMID:24859005)
GO_REF:0000107
RGD
Ensembl
PMID:24859005 GO_REF:0000107 NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:60,042,879...60,051,229
Ensembl chr11:57,265,732...57,481,589
JBrowse link
G Pten phosphatase and tensin homolog ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
phosphatidylserine exposure on blood platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 ISO (PMID:21107324) RGD PMID:21107324 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
positive regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (MGI:MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:MGI:4850200 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Dmtn dematin actin binding protein ISO (MGI:MGI:5465511|PMID:23060452) RGD PMID:23060452 MGI:MGI:5465511 NCBI chr15:52,292,762...52,320,385
Ensembl chr15:52,292,765...52,320,385
JBrowse link
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 ISO (PMID:22995898) RGD PMID:22995898 NCBI chr 9:19,446,807...19,457,946
Ensembl chr 9:19,448,269...19,457,946
JBrowse link
G F12 coagulation factor XII ISO
IEA
(PMID:6793628)
GO_REF:0000107
RGD
Ensembl
PMID:6793628 GO_REF:0000107 NCBI chr17:9,736,577...9,744,420
Ensembl chr17:9,736,577...9,744,420
JBrowse link
G F2 coagulation factor II ISO
IBA
IEA
IMP
(PMID:9038223)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:9038223, PMID:21873635, PMID:20664909 GO_REF:0000107, RGD:13792537, RGD:10449431 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G F2r coagulation factor II (thrombin) receptor ISO
IBA
IEA
ISS
MGI:MGI:3038377 (MGI:MGI:3784647|PMID:18305483)
PMID:21873635
GO_REF:0000107
GO_REF:0000024
(PMID:9038223)
RGD
Ensembl
UniProt
PMID:9038223, PMID:18305483, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3784647, RGD:13792537 NCBI chr 2:26,118,760...26,135,340
Ensembl chr 2:26,118,760...26,135,340
JBrowse link
G F7 coagulation factor VII IDA RGD PMID:12757778 RGD:2312295 NCBI chr16:81,824,610...81,834,923
Ensembl chr16:81,824,111...81,834,945
JBrowse link
G Hpse heparanase IEA
ISO
GO_REF:0000107
(PMID:20634491)
Ensembl
RGD
PMID:20634491 GO_REF:0000107 NCBI chr14:10,534,358...10,576,686
Ensembl chr14:10,534,423...10,575,224
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 ISO (MGI:MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:MGI:4850200 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Prdx2 peroxiredoxin 2 ISO
IEA
(MGI:MGI:4850200|PMID:20978343)
GO_REF:0000107
RGD
Ensembl
PMID:20978343 GO_REF:0000107, MGI:MGI:4850200 NCBI chr19:26,084,816...26,090,095
Ensembl chr19:26,084,903...26,090,094
JBrowse link
G S100a9 S100 calcium binding protein A9 ISO (MGI:MGI:5582990|PMID:24691441) RGD PMID:24691441 MGI:MGI:5582990 NCBI chr 2:190,097,436...190,100,209
Ensembl chr 2:190,097,554...190,100,276
JBrowse link
G Serpine1 serpin family E member 1 ISO (PMID:9207454) RGD PMID:9207454 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:2447421|PMID:12097641)
UniProt
RGD
PMID:12097641 GO_REF:0000024, MGI:MGI:2447421 NCBI chr 8:36,264,741...36,314,811
Ensembl chr 8:36,264,750...36,314,811
JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:7848332 RGD:11059887 NCBI chr 7:11,253,153...11,259,233
Ensembl chr 7:11,253,180...11,257,977
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:3997886) RGD PMID:3997886 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
positive regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11 coagulation factor XI ISO (PMID:89876) RGD PMID:89876 NCBI chr16:50,179,458...50,201,644
Ensembl chr16:50,179,458...50,201,698
JBrowse link
G F12 coagulation factor XII ISO
IEA
(PMID:89876)
GO_REF:0000107
RGD
Ensembl
PMID:89876 GO_REF:0000107 NCBI chr17:9,736,577...9,744,420
Ensembl chr17:9,736,577...9,744,420
JBrowse link
G Klkb1 kallikrein B1 ISO
IEA
(PMID:89876)
GO_REF:0000107
RGD
Ensembl
PMID:89876 GO_REF:0000107 NCBI chr16:50,151,127...50,175,407
Ensembl chr16:50,152,008...50,175,458
JBrowse link
G Plg plasminogen ISO (PMID:26667841), (PMID:6438154) RGD PMID:6438154, PMID:26667841 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Foxc2 forkhead box C2 ISO (MGI:MGI:3813419|PMID:18579532) RGD PMID:18579532 MGI:MGI:3813419 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO (PMID:16774925) RGD PMID:16774925 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Vegfb vascular endothelial growth factor B ISO (PMID:16109918) RGD PMID:16109918 NCBI chr 1:222,237,000...222,242,786
Ensembl chr 1:222,239,022...222,242,644
JBrowse link
G Xbp1 X-box binding protein 1 ISO (PMID:25656649) RGD PMID:25656649 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
positive regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 ISO (PMID:25705373) RGD PMID:25705373 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954
JBrowse link
G Adra2a adrenoceptor alpha 2A ISO (PMID:17655843) RGD PMID:17655843 NCBI chr 1:274,766,283...274,769,083
Ensembl chr 1:274,766,283...274,769,081
JBrowse link
G Anxa1 annexin A1 ISO
IBA
ISS
(PMID:25664854)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25664854, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Arfgef1 ADP ribosylation factor guanine nucleotide exchange factor 1 ISO
ISS
(PMID:22084092)
GO_REF:0000024
RGD
UniProt
PMID:22084092 GO_REF:0000024 NCBI chr 5:8,666,046...8,760,458
Ensembl chr 5:8,666,200...8,760,458
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ISO (PMID:23389627) RGD PMID:23389627 NCBI chr 2:187,964,100...188,022,847
Ensembl chr 2:187,977,008...188,021,377
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IMP RGD PMID:12831234 RGD:11526146 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccn4 cellular communication network factor 4 IEA
ISO
GO_REF:0000107
(MGI:MGI:6196779|PMID:29330021)
Ensembl
RGD
PMID:29330021 GO_REF:0000107, MGI:MGI:6196779 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Cldn1 claudin 1 ISO (PMID:28412298) RGD PMID:28412298 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cldn3 claudin 3 ISO (PMID:16103090) RGD PMID:16103090 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813
JBrowse link
G Cldn4 claudin 4 ISO (PMID:16103090) RGD PMID:16103090 NCBI chr12:24,761,210...24,763,008
Ensembl chr12:24,761,210...24,763,005
JBrowse link
G Clec7a C-type lectin domain containing 7A ISO
IBA
(PMID:24721111)
PMID:21873635
RGD PMID:24721111, PMID:21873635 RGD:13792537 NCBI chr 4:163,216,152...163,227,367
Ensembl chr 4:163,216,163...163,227,334
JBrowse link
G Dmtn dematin actin binding protein ISO (MGI:MGI:3803395|PMID:18505823) RGD PMID:18505823 MGI:MGI:3803395 NCBI chr15:52,292,762...52,320,385
Ensembl chr15:52,292,765...52,320,385
JBrowse link
G Duox1 dual oxidase 1 IEA
ISO
GO_REF:0000107
UniProtKB:Q1HG43-2 (PMID:19339556)
Ensembl
RGD
PMID:19339556 GO_REF:0000107 NCBI chr 3:114,251,794...114,286,827
Ensembl chr 3:114,253,637...114,286,802
JBrowse link
G Duox2 dual oxidase 2 ISO UniProtKB:Q1HG44 (PMID:19339556) RGD PMID:19339556 NCBI chr 3:114,218,187...114,237,808
Ensembl chr 3:114,218,193...114,235,933
JBrowse link
G Hbegf heparin-binding EGF-like growth factor ISO (PMID:17655843) RGD PMID:17655843 NCBI chr18:29,330,302...29,340,185
Ensembl chr18:29,329,764...29,340,403
JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:MGI:3760906|PMID:16365390) RGD PMID:16365390 MGI:MGI:3760906 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO (PMID:23027131) RGD PMID:23027131 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Insl3 insulin-like 3 ISO (PMID:23539510) RGD PMID:23539510 NCBI chr16:20,120,753...20,122,702
Ensembl chr16:20,121,352...20,122,696
JBrowse link
G Itgb1 integrin subunit beta 1 ISO
IEA
(PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945 GO_REF:0000107 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 ISO (PMID:22084092) RGD PMID:22084092 NCBI chr 1:243,201,073...243,398,531
Ensembl chr 1:243,276,403...243,398,536
JBrowse link
G Mylk myosin light chain kinase ISO (PMID:15825080) RGD PMID:15825080 NCBI chr11:69,013,060...69,260,039
Ensembl chr11:69,013,050...69,223,158
JBrowse link
G Ocln occludin ISO (PMID:20152177) RGD PMID:20152177 NCBI chr 2:30,527,327...30,577,218
Ensembl chr 2:30,527,715...30,577,218
JBrowse link
G Prkce protein kinase C, epsilon ISO
ISS
(PMID:17603037)
GO_REF:0000024
RGD
UniProt
PMID:17603037 GO_REF:0000024 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:16515909 RGD:10043388 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO
IEA
(PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945 GO_REF:0000107 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Reg3a regenerating islet-derived 3 alpha IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5488867|PMID:22727489)
Ensembl
UniProt
RGD
PMID:22727489 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5488867 NCBI chr 4:109,477,893...109,480,659
Ensembl chr 4:109,477,920...109,480,659
JBrowse link
G Reg3g regenerating family member 3 gamma ISO
ISS
(MGI:MGI:5488867|PMID:22727489)
GO_REF:0000024
RGD
UniProt
PMID:22727489 GO_REF:0000024, MGI:MGI:5488867 NCBI chr 4:109,529,679...109,532,234
Ensembl chr 4:109,529,679...109,532,234
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 fermitin family member 1 ISO UniProtKB:Q96AC1 (PMID:21356350) RGD PMID:21356350 NCBI chr 3:125,566,744...125,607,864
Ensembl chr 3:125,566,643...125,607,735
JBrowse link
G Fermt2 fermitin family member 2 ISO (PMID:21356350) RGD PMID:21356350 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Rreb1 ras responsive element binding protein 1 ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:27,539,137...27,718,878
Ensembl chr17:27,539,133...27,665,266
JBrowse link
regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H ISO MGI:MGI:2157224 (MGI:MGI:1933877|PMID:11145969) RGD PMID:11145969 MGI:MGI:1933877 NCBI chr10:96,640,013...96,653,939
Ensembl chr10:96,639,924...96,653,938
JBrowse link
G Cav1 caveolin 1 ISO
IEA
(PMID:17848177)
GO_REF:0000107
RGD
Ensembl
PMID:17848177 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Ephb2 Eph receptor B2 ISO (PMID:30213874) RGD PMID:30213874 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G F11 coagulation factor XI ISO MGI:MGI:2384015 (MGI:MGI:3719506|PMID:16533887) RGD PMID:16533887 MGI:MGI:3719506 NCBI chr16:50,179,458...50,201,644
Ensembl chr16:50,179,458...50,201,698
JBrowse link
G F2r coagulation factor II (thrombin) receptor ISO (PMID:17848177) RGD PMID:17848177 NCBI chr 2:26,118,760...26,135,340
Ensembl chr 2:26,118,760...26,135,340
JBrowse link
G F2rl1 F2R like trypsin receptor 1 ISO (PMID:17848177) RGD PMID:17848177 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
G Foxa2 forkhead box A2 ISO
IEA
(PMID:12911579)
GO_REF:0000107
RGD
Ensembl
PMID:12911579 GO_REF:0000107 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Hrg histidine-rich glycoprotein IEA
ISO
ISS
GO_REF:0000107
(PMID:21304106), (PMID:6740558)
GO_REF:0000024
(MGI:MGI:3789419|PMID:15869579)
Ensembl
RGD
UniProt
PMID:6740558, PMID:15869579, PMID:21304106 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3789419 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr11:81,621,283...81,639,952 JBrowse link
G Vkorc1 vitamin K epoxide reductase complex, subunit 1 IMP RGD PMID:14765194 RGD:1303972 NCBI chr 1:199,338,785...199,341,306
Ensembl chr 1:199,337,138...199,341,302
JBrowse link
regulation of blood coagulation, intrinsic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpinc1 serpin family C member 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:78,806,107...78,820,375
Ensembl chr13:78,805,347...78,833,192
JBrowse link
regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 TAS RGD PMID:11739291 RGD:1578383 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Apoh apolipoprotein H ISO (PMID:16480936) RGD PMID:16480936 NCBI chr10:96,640,013...96,653,939
Ensembl chr10:96,639,924...96,653,938
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    response to stimulus 10580
      response to stress 4062
        response to wounding 625
          wound healing 435
            regulation of wound healing 130
              negative regulation of wound healing + 72
              positive regulation of wound healing + 58
              regulation of blood coagulation + 66
              regulation of vascular wound healing + 10
              regulation of wound healing, spreading of epidermal cells + 8
Path 2
Term Annotations click to browse term
  biological_process 20020
    biological regulation 13769
      regulation of biological process 13071
        regulation of response to stimulus 3982
          regulation of response to stress 1311
            regulation of response to wounding 172
              regulation of wound healing 130
                negative regulation of wound healing + 72
                positive regulation of wound healing + 58
                regulation of blood coagulation + 66
                regulation of vascular wound healing + 10
                regulation of wound healing, spreading of epidermal cells + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.