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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of wound healing
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Accession:GO:0061041 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.



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regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm4 cell adhesion molecule 4 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:25893857)
GO_REF:0000033
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:25893857 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:80,075,163...80,097,423
Ensembl chr 1:80,075,202...80,097,423
JBrowse link
G Crk CRK proto-oncogene, adaptor protein NOT|involved_in ISO (PMID:17515907) RGD PMID:17515907 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:24440982)
UniProt
RGD
PMID:24440982 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Tnfrsf12a TNF receptor superfamily member 12A involved_in ISO (PMID:11728344) RGD PMID:11728344 NCBI chr10:12,707,077...12,709,071
Ensembl chr10:12,689,890...12,709,045
JBrowse link
G Vil1 villin 1 involved_in ISO (PMID:12937273) RGD PMID:12937273 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858
JBrowse link
activation of blood coagulation via clotting cascade term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in ISO (PMID:21107324) RGD PMID:21107324 NCBI chr 7:126,933,919...127,113,588
Ensembl chr 7:126,933,936...127,113,589
JBrowse link
G Vwf von Willebrand factor acts_upstream_of_or_within ISO (PMID:30573509) RGD PMID:30573509 NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539
JBrowse link
fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3028929 (PMID:14702107)
Ensembl
RGD
PMID:14702107 GO_REF:0000107 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Cpb2 carboxypeptidase B2 involved_in IMP
IBA
GO_REF:0000033 GO_Central
RGD
PMID:11848438 GO_REF:0000033, RGD:632532 NCBI chr15:50,557,722...50,606,569
Ensembl chr15:50,557,717...50,606,556
JBrowse link
G F12 coagulation factor XII involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:9,207,683...9,215,530
Ensembl chr17:9,207,683...9,215,530
JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO
IEA
(PMID:12855810)
GO_REF:0000107
RGD
Ensembl
PMID:12855810 GO_REF:0000107 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G Fga fibrinogen alpha chain involved_in ISO
IBA
(PMID:16846481)
GO_REF:0000033
RGD
GO_Central
PMID:16846481 GO_REF:0000033 NCBI chr 2:168,374,120...168,381,523
Ensembl chr 2:168,374,120...168,381,528
JBrowse link
G Fgb fibrinogen beta chain involved_in ISO (PMID:16846481) RGD PMID:16846481 NCBI chr 2:168,394,901...168,402,863
Ensembl chr 2:168,394,916...168,405,979
JBrowse link
G Fgg fibrinogen gamma chain involved_in ISO (PMID:16846481) RGD PMID:16846481 NCBI chr 2:168,354,880...168,362,325
Ensembl chr 2:168,355,013...168,362,322
JBrowse link
G Gp1ba glycoprotein Ib platelet subunit alpha involved_in ISO (PMID:12855810) RGD PMID:12855810 NCBI chr10:55,352,938...55,355,804
Ensembl chr10:55,352,899...55,356,774
JBrowse link
G Hrg histidine-rich glycoprotein involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000043
MGI:3789962 (PMID:15869579)
UniProt
RGD
PMID:15869579 GO_REF:0000043 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Hrgl1 histidine-rich glycoprotein like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Klkb1 kallikrein B1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:46,958,634...46,982,054
Ensembl chr16:46,958,707...46,982,053
JBrowse link
G Plau plasminogen activator, urokinase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000107
(PMID:9733098)
GO_Central
Ensembl
RGD
PMID:9733098 GO_REF:0000033 GO_REF:0000107 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
G Plg plasminogen involved_in ISO
IEA
(PMID:14688145), (PMID:17307854), (PMID:22025510)
GO_REF:0000104
RGD
UniProt
PMID:14688145 PMID:17307854 PMID:22025510 GO_REF:0000104 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786
JBrowse link
G Pros1 protein S involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:230,597...311,288
Ensembl chr11:230,696...311,286
JBrowse link
G Serping1 serpin family G member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:69,842,726...69,852,583
Ensembl chr 3:69,842,739...69,852,034
JBrowse link
negative regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO (PMID:21868574) RGD PMID:21868574 NCBI chr17:22,907,758...22,993,834
Ensembl chr17:22,930,740...22,993,826
JBrowse link
G Anxa5 annexin A5 IDA RGD PMID:20684318 RGD:7241850 NCBI chr 2:119,314,007...119,344,703
Ensembl chr 2:119,314,007...119,353,369
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:8995232) RGD PMID:8995232 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Apoh apolipoprotein H involved_in ISO
IEA
(PMID:4052628)
GO_REF:0000107
RGD
Ensembl
PMID:4052628 GO_REF:0000107 NCBI chr10:93,342,435...93,356,334
Ensembl chr10:93,310,977...93,356,329
JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:10761923) RGD PMID:10761923 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G Kng1 kininogen 1 involved_in ISO
IBA
(PMID:11970955)
GO_REF:0000033
RGD
GO_Central
PMID:11970955 GO_REF:0000033 NCBI chr11:77,812,757...77,835,555
Ensembl chr11:77,812,752...77,835,555
JBrowse link
G Kng2 kininogen 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:77,913,876...77,936,247
Ensembl chr11:77,909,612...78,002,971
JBrowse link
G Kng2l1 kininogen 2-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:77,978,795...78,002,976
Ensembl chr11:77,909,612...78,002,971
JBrowse link
G Pf4 platelet factor 4 involved_in ISO (PMID:9395524) RGD PMID:9395524 NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
MGI:2183063 (PMID:9616155), (PMID:9788960)
GO_REF:0000033
RGD
GO_Central
PMID:9616155 PMID:9788960 PMID:1440533 GO_REF:0000033, RGD:11100042 NCBI chr18:23,764,367...23,774,816
Ensembl chr18:23,764,368...23,775,133
JBrowse link
G Serpine2 serpin family E member 2 involved_in IDA
ISO
PMID:17379830
(PMID:17379830)
RGD PMID:17379830 PMID:17379830 RGD:8553298 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
G Tfpi tissue factor pathway inhibitor involved_in ISO (PMID:21868574) RGD PMID:21868574 NCBI chr 3:69,533,156...69,582,547
Ensembl chr 3:69,533,156...69,576,880
JBrowse link
G Thbd thrombomodulin involved_in ISO (PMID:10761923) RGD PMID:10761923 NCBI chr 3:135,863,366...135,867,018
Ensembl chr 3:135,862,835...135,867,193
JBrowse link
G Tspan8 tetraspanin 8 IDA RGD PMID:9531564 RGD:634231 NCBI chr 7:51,444,946...51,479,360
Ensembl chr 7:51,445,074...51,479,356
JBrowse link
negative regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H involved_in ISO
IEA
(PMID:14726399)
GO_REF:0000107
RGD
Ensembl
PMID:14726399 GO_REF:0000107 NCBI chr10:93,342,435...93,356,334
Ensembl chr10:93,310,977...93,356,329
JBrowse link
G Cpb2 carboxypeptidase B2 IDA RGD PMID:17002650 RGD:2313647 NCBI chr15:50,557,722...50,606,569
Ensembl chr15:50,557,717...50,606,556
JBrowse link
G Hrg histidine-rich glycoprotein involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3789962 (PMID:15869579)
GO_Central
RGD
PMID:15869579 GO_REF:0000033 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Hrgl1 histidine-rich glycoprotein like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Plg plasminogen involved_in ISO (PMID:14726399) RGD PMID:14726399 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786
JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO
IEA
(PMID:2503541)
GO_REF:0000107
RGD
Ensembl
PMID:2503541 GO_REF:0000107 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Serpinf2 serpin family F member 2 involved_in IMP
ISO
(PMID:134998) RGD PMID:134998 PMID:6506034 RGD:1625541 NCBI chr10:60,272,400...60,280,506
Ensembl chr10:60,272,400...60,281,243
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:6438154) RGD PMID:6438154 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
negative regulation of platelet activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(PMID:8995232)
Ensembl
RGD
PMID:8995232 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G C1qtnf1 C1q and TNF related 1 involved_in ISO (PMID:16195328) RGD PMID:16195328 NCBI chr10:103,660,319...103,681,662
Ensembl chr10:103,660,327...103,681,660
JBrowse link
G Gp5 glycoprotein V (platelet) acts_upstream_of_or_within ISO MGI:2652408 (PMID:10557321), (PMID:11435305) RGD PMID:10557321 PMID:11435305 NCBI chr11:70,443,613...70,446,705
Ensembl chr11:70,443,613...70,446,705
JBrowse link
G Pdgfa platelet derived growth factor subunit A involved_in ISO
IEA
ISS
(PMID:2538439)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:2538439 GO_REF:0000024 GO_REF:0000107 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO
ISS
IEA
(PMID:2538439)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:2538439 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:8188664)
UniProt
Ensembl
RGD
PMID:8188664 GO_REF:0000024 GO_REF:0000107 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Serpine2 serpin family E member 2 acts_upstream_of_or_within
involved_in
ISO MGI:2387774 (PMID:19855083) RGD PMID:19855083 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
negative regulation of platelet aggregation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 acts_upstream_of_or_within ISO (PMID:19218546) RGD PMID:19218546 NCBI chr19:41,686,951...41,840,035
Ensembl chr19:41,688,617...41,839,781
JBrowse link
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISS
ISO
GO_REF:0000024
(PMID:9501222)
UniProt
RGD
PMID:9501222 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G C1qtnf1 C1q and TNF related 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:16195328)
Ensembl
RGD
PMID:16195328 GO_REF:0000107 NCBI chr10:103,660,319...103,681,662
Ensembl chr10:103,660,327...103,681,660
JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:18541721)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18541721 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:158,256,328...158,289,136
Ensembl chr 4:158,256,328...158,289,222
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19008452)
UniProt
RGD
PMID:19008452 GO_REF:0000024 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Prkcd protein kinase C, delta involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:16940418)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16940418 GO_REF:0000024 GO_REF:0000107 NCBI chr16:5,769,217...5,799,380
Ensembl chr16:5,769,215...5,799,352
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 involved_in ISO (PMID:16990611) RGD PMID:16990611 NCBI chr 1:228,409,605...229,638,794
Ensembl chr 1:228,408,947...229,639,080
JBrowse link
G Serpine2 serpin family E member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:19855083)
Ensembl
RGD
PMID:19855083 GO_REF:0000107 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
G Sh2b3 SH2B adaptor protein 3 involved_in ISO
IEA
UniProtKB:P35951 (PMID:27430239)
GO_REF:0000107
RGD
Ensembl
PMID:27430239 GO_REF:0000107 NCBI chr12:34,731,934...34,753,617
Ensembl chr12:34,731,911...34,753,616
JBrowse link
G Tmx1 thioredoxin-related transmembrane protein 1 involved_in ISO (PMID:30425049) RGD PMID:30425049 NCBI chr 6:88,960,691...88,971,744
Ensembl chr 6:88,960,695...88,971,301
JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing, B acts_upstream_of_or_within ISO (PMID:20585042) RGD PMID:20585042 NCBI chr 8:41,385,419...41,532,248
Ensembl chr 8:41,388,341...41,532,201
JBrowse link
negative regulation of skeletal muscle tissue regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myoz1 myozenin 1 involved_in ISO (PMID:18846255) RGD PMID:18846255 NCBI chr15:3,644,333...3,651,584
Ensembl chr15:3,644,368...3,652,884
JBrowse link
negative regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:24226420)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24226420 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Mir200b microRNA 200b acts_upstream_of ISO (PMID:22499991) RGD PMID:22499991 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
JBrowse link
G Mir34a microRNA 34a involved_in ISO (PMID:26493107) RGD PMID:26493107 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO
IBA
IEA
UniProtKB:P22777 (PMID:9386191)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:9386191 GO_REF:0000033 GO_REF:0000107 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (PMID:28577991) RGD PMID:28577991 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
G Tafa5 TAFA chemokine like family member 5 acts_upstream_of_or_within IDA
ISO
PMID:29453251
(PMID:29453251)
RGD PMID:29453251 PMID:29453251 RGD:42721986 NCBI chr 7:118,613,731...118,835,016
Ensembl chr 7:118,613,889...118,834,353
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:22499991) RGD PMID:22499991 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
negative regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajap1 adherens junctions associated protein 1 involved_in ISO (PMID:16410724) RGD PMID:16410724 NCBI chr 5:163,907,846...164,021,004
Ensembl chr 5:163,907,847...164,020,317
JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in ISS
ISO
GO_REF:0000024
(PMID:24226420), (PMID:28965882)
UniProt
RGD
PMID:24226420 PMID:28965882 GO_REF:0000024 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase involved_in ISO (PMID:18664494) RGD PMID:18664494 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694
JBrowse link
G Cd109 CD109 molecule involved_in ISO (PMID:16754747) RGD PMID:16754747 NCBI chr 8:79,454,480...79,569,195
Ensembl chr 8:79,454,480...79,569,194
JBrowse link
G Cldn19 claudin 19 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Crk CRK proto-oncogene, adaptor protein involved_in ISO (PMID:17515907) RGD PMID:17515907 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Eppk1 epiplakin 1 involved_in ISO (PMID:23398049)
(PMID:20926261)
RGD PMID:20926261 PMID:23398049 NCBI chr 7:107,816,919...107,842,946
Ensembl chr 7:107,817,693...107,831,159
JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) RGD PMID:19577615 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Mir15b microRNA 15b acts_upstream_of ISO (PMID:23688497) RGD PMID:23688497 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297
JBrowse link
G Mmrn1 multimerin 1 involved_in ISO (PMID:19132231)
(PMID:20138333)
RGD PMID:19132231 PMID:20138333 NCBI chr 4:89,875,408...89,950,814
Ensembl chr 4:89,903,174...89,950,474
JBrowse link
G Muc16 mucin 16, cell surface associated acts_upstream_of_or_within ISO MGI:3840843 (PMID:24812549) RGD PMID:24812549 NCBI chr 8:16,164,531...16,323,126 JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:10559937), (PMID:14617288), (PMID:21035443) RGD PMID:10559937 PMID:14617288 PMID:21035443 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Wfdc1 WAP four-disulfide core domain 1 acts_upstream_of_or_within ISO MGI:5609943 (PMID:25219356) RGD PMID:25219356 NCBI chr19:47,720,191...47,739,121
Ensembl chr19:47,720,423...47,739,108
JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA
UniProtKB:P01112 (PMID:23027131)
GO_REF:0000107
RGD
Ensembl
PMID:23027131 GO_REF:0000107 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
phosphatidylserine exposure on blood platelet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 involved_in ISO (PMID:21107324) RGD PMID:21107324 NCBI chr 7:126,933,919...127,113,588
Ensembl chr 7:126,933,936...127,113,589
JBrowse link
positive regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule involved_in IEA
ISO
GO_REF:0000107
(PMID:20978343)
Ensembl
RGD
PMID:20978343 GO_REF:0000107 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Emilin2 elastin microfibril interfacer 2 involved_in ISO (PMID:25658937) RGD PMID:25658937 NCBI chr 9:111,160,708...111,220,463
Ensembl chr 9:111,160,712...111,220,352
JBrowse link
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in ISO (PMID:22995898) RGD PMID:22995898 NCBI chr 9:16,888,923...16,898,860
Ensembl chr 9:16,887,739...16,898,860
JBrowse link
G F12 coagulation factor XII involved_in IEA
ISO
GO_REF:0000107
(PMID:6793628)
Ensembl
RGD
PMID:6793628 GO_REF:0000107 NCBI chr17:9,207,683...9,215,530
Ensembl chr17:9,207,683...9,215,530
JBrowse link
G F2 coagulation factor II, thrombin involved_in IMP
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000107
(PMID:9038223)
GO_Central
Ensembl
RGD
PMID:9038223 PMID:20664909 GO_REF:0000033 GO_REF:0000107, RGD:10449431 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
ISS
GO_REF:0000107
MGI:3038377 (PMID:18305483)
GO_REF:0000033
GO_REF:0000024
(PMID:9038223)
Ensembl
RGD
GO_Central
UniProt
PMID:9038223 PMID:18305483 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
JBrowse link
G F7 coagulation factor VII IDA RGD PMID:12757778 RGD:2312295 NCBI chr16:76,489,775...76,500,636
Ensembl chr16:76,489,717...76,500,610
JBrowse link
G Hpse heparanase involved_in IEA
ISO
GO_REF:0000107
(PMID:20634491)
Ensembl
RGD
PMID:20634491 GO_REF:0000107 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:20978343) RGD PMID:20978343 NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Prdx2 peroxiredoxin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20978343)
Ensembl
RGD
PMID:20978343 GO_REF:0000107 NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO (PMID:24691441) RGD PMID:24691441 NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230
JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:9207454) RGD PMID:9207454 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:12097641)
UniProt
RGD
PMID:12097641 GO_REF:0000024 NCBI chr 8:33,415,666...33,465,319
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:7848332 RGD:11059887 NCBI chr 7:8,383,347...8,390,753
Ensembl chr 7:8,383,378...8,388,176
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:3997886) RGD PMID:3997886 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
positive regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11 coagulation factor XI involved_in ISO (PMID:89876) RGD PMID:89876 NCBI chr16:46,987,988...47,009,015
Ensembl chr16:46,986,107...47,008,437
JBrowse link
G F12 coagulation factor XII involved_in IEA
ISO
GO_REF:0000107
(PMID:89876)
Ensembl
RGD
PMID:89876 GO_REF:0000107 NCBI chr17:9,207,683...9,215,530
Ensembl chr17:9,207,683...9,215,530
JBrowse link
G Klkb1 kallikrein B1 involved_in ISO
IEA
(PMID:89876)
GO_REF:0000107
RGD
Ensembl
PMID:89876 GO_REF:0000107 NCBI chr16:46,958,634...46,982,054
Ensembl chr16:46,958,707...46,982,053
JBrowse link
G Plg plasminogen involved_in ISO (PMID:26667841), (PMID:6438154) RGD PMID:6438154 PMID:26667841 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786
JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Foxc2 forkhead box C2 involved_in ISO (PMID:18579532) RGD PMID:18579532 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IMP RGD PMID:30052311 RGD:155663378 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Mir451a microRNA 451a involved_in ISO (PMID:25006399) RGD PMID:25006399 NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in ISO (PMID:16774925) RGD PMID:16774925 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:16109918) RGD PMID:16109918 NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
IEA
(PMID:25656649)
GO_REF:0000107
RGD
Ensembl
PMID:25656649 GO_REF:0000107 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
positive regulation of wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO
IEA
(PMID:25705373)
GO_REF:0000107
RGD
Ensembl
PMID:25705373 GO_REF:0000107 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
JBrowse link
G Actg1l1 actin, gamma 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:72,977,767...72,979,691
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in ISO (PMID:17655843) RGD PMID:17655843 NCBI chr 1:253,061,480...253,064,280
Ensembl chr 1:253,060,218...253,064,365
JBrowse link
G Anxa1 annexin A1 involved_in ISO
ISS
IEA
(PMID:25664854)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:25664854 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Arfgef1 ARF guanine nucleotide exchange factor 1 involved_in ISO
IEA
ISS
(PMID:22084092)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22084092 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:8,982,061...9,076,326
Ensembl chr 5:8,981,540...9,076,326
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:23389627) RGD PMID:23389627 NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IMP RGD PMID:12831234 RGD:11526146 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccn4 cellular communication network factor 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:29330021)
Ensembl
RGD
PMID:29330021 GO_REF:0000107 NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
JBrowse link
G Cldn1 claudin 1 involved_in ISO (PMID:28412298) RGD PMID:28412298 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:16103090) RGD PMID:16103090 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Cldn4 claudin 4 involved_in ISO (PMID:16103090) RGD PMID:16103090 NCBI chr12:21,751,638...21,753,436
Ensembl chr12:21,751,331...21,753,436
JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:24721111) RGD PMID:24721111 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 IMP RGD PMID:26674152 RGD:11554781 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (PMID:18505823) RGD PMID:18505823 NCBI chr15:45,677,974...45,702,261
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Duox1 dual oxidase 1 involved_in ISO
IEA
UniProtKB:Q1HG43-2 (PMID:19339556)
GO_REF:0000107
RGD
Ensembl
PMID:19339556 GO_REF:0000107 NCBI chr 3:109,260,526...109,295,588
Ensembl chr 3:109,262,397...109,295,563
JBrowse link
G Duox2 dual oxidase 2 involved_in ISO UniProtKB:Q1HG44 (PMID:19339556) RGD PMID:19339556 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902
JBrowse link
G Hbegf heparin-binding EGF-like growth factor involved_in ISO (PMID:17655843) RGD PMID:17655843 NCBI chr18:28,106,284...28,116,167
Ensembl chr18:28,105,760...28,116,441
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:16365390) RGD PMID:16365390 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:23027131) RGD PMID:23027131 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Insl3 insulin-like 3 involved_in ISO (PMID:23539510) RGD PMID:23539510 NCBI chr16:18,398,682...18,400,566
Ensembl chr16:18,384,829...18,400,560
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:26763945) RGD PMID:26763945 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Jak3 Janus kinase 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 involved_in ISO (PMID:22084092) RGD PMID:22084092 NCBI chr 1:222,877,962...223,074,514
Ensembl chr 1:222,877,622...223,074,514
JBrowse link
G Mir21 microRNA 21 IMP RGD PMID:27798620 RGD:41404703 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir29a microRNA 29a involved_in ISO (PMID:25058496) RGD PMID:25058496 NCBI chr 4:59,650,608...59,650,695 JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:15825080) RGD PMID:15825080 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Ocln occludin involved_in ISO (PMID:20152177) RGD PMID:20152177 NCBI chr 2:31,657,217...31,707,466
Ensembl chr 2:31,657,220...31,764,150
JBrowse link
G Prkce protein kinase C, epsilon involved_in ISO
ISS
IEA
(PMID:17603037)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:17603037 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:16515909 RGD:10043388 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (PMID:26763945) RGD PMID:26763945 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Reg3a regenerating islet-derived 3 alpha involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22727489)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22727489 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:110,872,398...110,875,157
Ensembl chr 4:110,872,425...110,875,157
JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISS
ISO
GO_REF:0000024
(PMID:22727489)
UniProt
RGD
PMID:22727489 GO_REF:0000024 NCBI chr 4:110,922,805...110,927,803
Ensembl chr 4:110,924,168...110,926,723
JBrowse link
G Tmem97 transmembrane protein 97 involved_in ISS
ISO
GO_REF:0000024
(PMID:34233061)
UniProt
RGD
PMID:34233061 GO_REF:0000024 NCBI chr10:63,438,228...63,447,311
Ensembl chr10:63,438,222...63,589,730
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 FERM domain containing kindlin 1 involved_in ISO UniProtKB:Q96AC1 (PMID:21356350) RGD PMID:21356350 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21356350) RGD PMID:21356350 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Mir221 microRNA 221 involved_in ISO (PMID:24269686) RGD PMID:24269686 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
IEA
(PMID:27919618)
GO_REF:0000107
RGD
Ensembl
PMID:27919618 GO_REF:0000107 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Rreb1 ras responsive element binding protein 1 involved_in ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:26,876,687...27,002,554
Ensembl chr17:26,876,697...27,002,615
JBrowse link
regulation of blood coagulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoh apolipoprotein H acts_upstream_of_or_within ISO MGI:2157224 (PMID:11145969) RGD PMID:11145969 NCBI chr10:93,342,435...93,356,334
Ensembl chr10:93,310,977...93,356,329
JBrowse link
G Cav1 caveolin 1 involved_in ISO
IEA
(PMID:17848177)
GO_REF:0000107
RGD
Ensembl
PMID:17848177 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (PMID:30213874) RGD PMID:30213874 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G F11 coagulation factor XI acts_upstream_of_or_within ISO MGI:2384015 (PMID:16533887) RGD PMID:16533887 NCBI chr16:46,987,988...47,009,015
Ensembl chr16:46,986,107...47,008,437
JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in ISO (PMID:17848177) RGD PMID:17848177 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:17848177) RGD PMID:17848177 NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
JBrowse link
G Foxa2 forkhead box A2 involved_in ISO
IEA
(PMID:12911579)
GO_REF:0000107
RGD
Ensembl
PMID:12911579 GO_REF:0000107 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Hrg histidine-rich glycoprotein involved_in ISO
ISS
(PMID:21304106), (PMID:6740558)
(PMID:15869579)
GO_REF:0000024
RGD
UniProt
PMID:6740558 PMID:15869579 PMID:21304106 GO_REF:0000024 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Hrgl1 histidine-rich glycoprotein like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Serpinc1 serpin family C member 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:73,257,208...73,271,476
Ensembl chr13:73,257,179...73,284,293
JBrowse link
G Vkorc1 vitamin K epoxide reductase complex, subunit 1 IMP RGD PMID:14765194 RGD:1303972 NCBI chr 1:182,502,491...182,505,012
Ensembl chr 1:182,500,844...182,505,008
JBrowse link
regulation of fibrinolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 TAS RGD PMID:11739291 RGD:1578383 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Apoh apolipoprotein H involved_in ISO (PMID:16480936) RGD PMID:16480936 NCBI chr10:93,342,435...93,356,334
Ensembl chr10:93,310,977...93,356,329
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20075
    response to stimulus 10793
      response to stress 4260
        response to wounding 622
          wound healing 421
            regulation of wound healing 138
              negative regulation of wound healing + 71
              positive regulation of wound healing + 68
              regulation of blood coagulation + 65
              regulation of vascular wound healing + 14
              regulation of wound healing, spreading of epidermal cells + 9
Path 2
Term Annotations click to browse term
  biological_process 20075
    biological regulation 13559
      regulation of biological process 13136
        regulation of response to stimulus 4297
          regulation of response to stress 1456
            regulation of response to wounding 188
              regulation of wound healing 138
                negative regulation of wound healing + 71
                positive regulation of wound healing + 68
                regulation of blood coagulation + 65
                regulation of vascular wound healing + 14
                regulation of wound healing, spreading of epidermal cells + 9
paths to the root