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ONTOLOGY REPORT - ANNOTATIONS


Term:common bile duct development
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Accession:GO:0061009 term browser browse the term
Definition:The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gall bladder. The common bile duct transports bile from the liver and gall bladder to the intestine.
Synonyms:exact_synonym: CBD development;   bile duct development
 broad_synonym: EHBD development;   extrahepatic bile duct development



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common bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:3794480|PMID:16443691) DFLAT PMID:16443691 MGI:3794480 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4355651|PMID:19619492) Ensembl
MGI
PMID:19619492 GO_REF:0000107 MGI:4355651 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:3720549|PMID:17580084) MGI PMID:17580084 MGI:3720549 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G MKS1 MKS transition zone complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367169|PMID:19776033) MGI
Ensembl
PMID:19776033 GO_REF:0000107 MGI:4367169 NCBI chr17:58,205,436...58,219,605
Ensembl chr17:58,205,441...58,219,605
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4421275|PMID:19913509) Ensembl
MGI
PMID:19913509 GO_REF:0000107 MGI:4421275 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892
JBrowse link
hepatic duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:3720549|PMID:17580084) MGI PMID:17580084 MGI:3720549 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAK cyclin G associated kinase acts_upstream_of_or_within ISO (MGI:5305417|PMID:18434600) MGI PMID:18434600 MGI:5305417 NCBI chr 4:849,276...932,330
Ensembl chr 4:849,276...932,373
JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5616947|PMID:25446530) Ensembl
MGI
PMID:25446530 GO_REF:0000107 MGI:5616947 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3852603|PMID:19403103) Ensembl
MGI
PMID:19403103 GO_REF:0000107 MGI:3852603 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18539
    multicellular organismal process 8425
      multicellular organism development 5926
        tube development 1284
          common bile duct development 8
            cystic duct development 0
            hepatic duct development 1
            intrahepatic bile duct development 3
Path 2
Term Annotations click to browse term
  biological_process 18539
    developmental process 7230
      anatomical structure development 6553
        multicellular organism development 5926
          system development 5600
            hepaticobiliary system development 265
              common bile duct development 8
                cystic duct development 0
                hepatic duct development 1
                intrahepatic bile duct development 3
paths to the root