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ONTOLOGY REPORT - ANNOTATIONS


Term:common bile duct development
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Accession:GO:0061009 term browser browse the term
Definition:The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gall bladder. The common bile duct transports bile from the liver and gall bladder to the intestine.
Synonyms:exact_synonym: CBD development;   bile duct development
 broad_synonym: EHBD development;   extrahepatic bile duct development



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common bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:3794480|PMID:16443691) DFLAT PMID:16443691 MGI:3794480 NCBI chr 7:17,949,254...17,998,737 JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:4355651|PMID:19619492) MGI PMID:19619492 MGI:4355651 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:3720549|PMID:17580084) MGI PMID:17580084 MGI:3720549 NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992
JBrowse link
G MKS1 MKS transition zone complex subunit 1 acts_upstream_of_or_within ISO (MGI:4367169|PMID:19776033) MGI PMID:19776033 MGI:4367169 NCBI chr17:52,281,443...52,295,919
Ensembl chr17:57,137,254...57,151,328
JBrowse link
G SOX17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (MGI:4421275|PMID:19913509) MGI PMID:19913509 MGI:4421275 NCBI chr 8:50,883,088...50,885,542
Ensembl chr 8:48,257,287...48,259,808
JBrowse link
hepatic duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:3720549|PMID:17580084) MGI PMID:17580084 MGI:3720549 NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992
JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAK cyclin G associated kinase acts_upstream_of_or_within ISO (MGI:5305417|PMID:18434600) MGI PMID:18434600 MGI:5305417 NCBI chr 4:952,474...1,049,612
Ensembl chr 4:883,096...967,473
JBrowse link
G NOTCH2 notch receptor 2 acts_upstream_of_or_within ISO (MGI:5616947|PMID:25446530) MGI PMID:25446530 MGI:5616947 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:3852603|PMID:19403103) MGI PMID:19403103 MGI:3852603 NCBI chr17:66,028,737...66,034,122 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12661
    multicellular organismal process 6550
      multicellular organism development 5046
        tube development 1148
          common bile duct development 8
            cystic duct development 0
            hepatic duct development 1
            intrahepatic bile duct development 3
Path 2
Term Annotations click to browse term
  biological_process 12661
    developmental process 5914
      anatomical structure development 5517
        multicellular organism development 5046
          system development 4748
            hepaticobiliary system development 251
              common bile duct development 8
                cystic duct development 0
                hepatic duct development 1
                intrahepatic bile duct development 3
paths to the root