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ONTOLOGY REPORT - ANNOTATIONS


Term:cell differentiation involved in kidney development
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Accession:GO:0061005 term browser browse the term
Definition:The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the kidney as it progresses from its formation to the mature state.



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cell differentiation involved in kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:105373 (MGI:4367286|PMID:19809516) RGD PMID:19809516 MGI:4367286 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Glis2 GLIS family zinc finger 2 acts_upstream_of_or_within ISO MGI:3719836 (MGI:3718754|PMID:17618285) RGD PMID:17618285 MGI:3718754 NCBI chr10:10,951,157...10,978,524
Ensembl chr10:10,951,371...10,971,578
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:95729 (MGI:4367286|PMID:19809516) RGD PMID:19809516 MGI:4367286 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
cell differentiation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO (MGI:5006869|PMID:21523854) RGD PMID:21523854 MGI:5006869 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle involved_in ISO
IEA
(PMID:17464107)
GO_REF:0000107
RGD
Ensembl
PMID:17464107 GO_REF:0000107 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (MGI:3619287|PMID:16498405) RGD PMID:16498405 MGI:3619287 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO MGI:3700206 (MGI:3699048|PMID:17145776) RGD PMID:17145776 MGI:3699048 NCBI chr 1:78,865,376...78,877,126
Ensembl chr 1:78,865,409...78,876,599
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
glomerular parietal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in ISO (PMID:9530170) RGD PMID:9530170 NCBI chr10:101,566,299...101,570,249 JBrowse link
glomerular parietal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO
ISS
(PMID:19092120)
GO_REF:0000024
RGD
UniProt
PMID:19092120 GO_REF:0000024 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:19092120) RGD PMID:19092120 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO MGI:3848348 (MGI:5647943|PMID:25361754) RGD PMID:25361754 MGI:5647943 NCBI chr 2:195,707,609...195,720,454
Ensembl chr 2:195,707,610...195,720,271
JBrowse link
G Asxl1 ASXL transcriptional regulator 1 involved_in ISO (MGI:5751943|PMID:26385183) RGD PMID:26385183 MGI:5751943 NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17442697)
Ensembl
RGD
PMID:17442697 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5498584|PMID:23806616)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23806616 GO_REF:0000024 GO_REF:0000107 MGI:5498584 NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IEP PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 4:14,388,322...15,870,036
Ensembl chr 4:14,386,399...15,870,240
JBrowse link
G Myo1e myosin IE involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4441423|PMID:19005011)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19005011 GO_REF:0000024 GO_REF:0000107 MGI:4441423 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169
JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15821257)
Ensembl
RGD
PMID:15821257 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
JBrowse link
G Podxl podocalyxin-like involved_in IEP PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899
JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_or_within ISO (PMID:18618131) RGD PMID:18618131 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
glomerular visceral epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Basp1 brain abundant, membrane attached signal protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4418604|PMID:19050011)
Ensembl
RGD
PMID:19050011 GO_REF:0000107 MGI:4418604 NCBI chr 2:75,816,130...75,863,801
Ensembl chr 2:75,816,122...75,864,043
JBrowse link
G Cd24 CD24 molecule involved_in ISO
ISS
(PMID:19092120)
GO_REF:0000024
RGD
UniProt
PMID:19092120 GO_REF:0000024 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Ednra endothelin receptor type A involved_in ISO MGI:102720|MGI:105923 (MGI:6453700|PMID:24722437), (MGI:6472022|PMID:31402170) RGD PMID:24722437 PMID:31402170 MGI:6453700 MGI:6472022 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Ednrb endothelin receptor type B involved_in ISO MGI:102720|MGI:105923 (MGI:6453700|PMID:24722437) RGD PMID:24722437 MGI:6453700 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (MGI:4360160|PMID:18480751) RGD PMID:18480751 MGI:4360160 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (MGI:3619287|PMID:16498405) RGD PMID:16498405 MGI:3619287 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Klf15 Kruppel-like factor 15 involved_in ISO (MGI:5431194|PMID:22493483) RGD PMID:22493483 MGI:5431194 NCBI chr 4:122,965,718...122,978,403
Ensembl chr 4:122,965,807...122,978,374
JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:19092120) RGD PMID:19092120 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:1927435|PMID:11086029)
PMID:21873635
UniProt
RGD
PMID:11086029 PMID:21873635 GO_REF:0000024 MGI:1927435, RGD:13792537 NCBI chr 4:170,164,071...170,374,790
Ensembl chr 4:170,164,431...170,374,771
JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:4418604|PMID:19050011)
UniProt
RGD
PMID:19050011 GO_REF:0000024 MGI:4418604 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:3806378 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874
JBrowse link
mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3826342|PMID:18835385)
UniProt
RGD
PMID:18835385 GO_REF:0000024 MGI:3826342 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link
mesenchymal cell differentiation involved in kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amer1 APC membrane recruitment protein 1 acts_upstream_of_or_within ISO MGI:2446599|MGI:5086003 (MGI:5013668|PMID:21571217) RGD PMID:21571217 MGI:5013668 NCBI chr  X:60,300,595...60,316,480
Ensembl chr  X:60,295,751...60,316,440
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:3710018|PMID:17442697)
Ensembl
RGD
PMID:17442697 GO_REF:0000107 MGI:3710018 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:3691408|PMID:17036046) RGD PMID:17036046 MGI:3691408 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3611729|PMID:16396903)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16396903 GO_REF:0000024 GO_REF:0000107 MGI:3611729 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:10706139)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10706139 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
IEA
ISO
IDA
GO_REF:0000107
(PMID:10322633)
PMID:17522159
Ensembl
RGD
PMID:10322633 PMID:17522159 GO_REF:0000107, RGD:8656002 NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3714585|PMID:17522159) RGD PMID:17522159 MGI:3714585 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:10322633)
UniProt
RGD
PMID:10322633 GO_REF:0000024 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:8861958) RGD PMID:8861958 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:11511981)
(MGI:2149437|PMID:11688560)
RGD PMID:11511981 PMID:11688560 MGI:2149437 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO (PMID:10322633) RGD PMID:10322633 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU class 3 homeobox 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:2669573|PMID:12925600)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12925600 GO_REF:0000024 GO_REF:0000107 MGI:2669573 NCBI chr 9:44,945,872...44,948,986
Ensembl chr 9:44,945,872...44,948,992
JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISS
ISO
GO_REF:0000024
(MGI:3039044|PMID:15084468)
UniProt
RGD
PMID:15084468 GO_REF:0000024 MGI:3039044 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule involved_in ISO (PMID:1868864) RGD PMID:1868864 NCBI chr13:106,480,074...106,499,462
Ensembl chr13:106,480,043...106,499,832
JBrowse link
metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2138070 (MGI:3664526|PMID:16886065)
Ensembl
RGD
PMID:16886065 GO_REF:0000107 MGI:3664526 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin involved_in ISO (PMID:11786407) RGD PMID:11786407 NCBI chr13:68,448,720...68,461,312
Ensembl chr13:68,448,926...68,461,313
JBrowse link
metanephric interstitial fibroblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3826342|PMID:18835385)
UniProt
RGD
PMID:18835385 GO_REF:0000024 MGI:3826342 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3697513|PMID:16790474)
UniProt
RGD
PMID:16790474 GO_REF:0000024 MGI:3697513 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3663200|PMID:16368682)
UniProt
RGD
PMID:16368682 GO_REF:0000024 MGI:3663200 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO
GO_REF:0000024
(MGI:2651771|PMID:12619136)
UniProt
RGD
PMID:12619136 GO_REF:0000024 MGI:2651771 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
JBrowse link
negative regulation of epithelial cell differentiation involved in kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 involved_in IEA
ISO
GO_REF:0000107
(MGI:6270954|PMID:24503540)
Ensembl
RGD
PMID:24503540 GO_REF:0000107 MGI:6270954 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:2388350|PMID:12399320)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in IMP PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3714576|PMID:17537789)
Ensembl
RGD
PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (MGI:5563280|PMID:24550112) RGD PMID:24550112 MGI:5563280 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
JBrowse link
negative regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3697513|PMID:16790474)
UniProt
RGD
PMID:16790474 GO_REF:0000024 MGI:3697513 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link
nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:4440396|PMID:20181743)
UniProt
RGD
PMID:20181743 GO_REF:0000024 MGI:4440396 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4440396|PMID:20181743)
UniProt
RGD
PMID:20181743 GO_REF:0000024 MGI:4440396 NCBI chr 7:90,488,751...90,628,007
Ensembl chr 7:90,488,754...90,627,968
JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO
GO_REF:0000107
(MGI:81286|PMID:8657306)
Ensembl
RGD
PMID:8657306 GO_REF:0000107 MGI:81286 NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in ISO
IEA
(PMID:20624457)
GO_REF:0000107
RGD
Ensembl
PMID:20624457 GO_REF:0000107 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q00288 (MGI:2445273|PMID:12435636)
UniProt
RGD
PMID:12435636 GO_REF:0000024 MGI:2445273 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:2445273|PMID:12435636)
UniProt
RGD
PMID:12435636 GO_REF:0000024 MGI:2445273 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3704067|PMID:17314325)
UniProt
RGD
PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:3704067|PMID:17314325)
UniProt
RGD
PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
positive regulation of metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO
GO_REF:0000024
(MGI:3795840|PMID:18431508)
UniProt
RGD
PMID:18431508 GO_REF:0000024 MGI:3795840 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
JBrowse link
positive regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISS
ISO
GO_REF:0000024
(PMID:16885410)
UniProt
RGD
PMID:16885410 GO_REF:0000024 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3613206|PMID:16216236)
UniProt
RGD
PMID:16216236 GO_REF:0000024 MGI:3613206 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:16885410) RGD PMID:16885410 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
regulation of epithelial cell differentiation involved in kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkx protein kinase, X-linked involved_in ISO (PMID:17980165) RGD PMID:17980165 NCBI chr  X:41,823,349...41,866,844
Ensembl chr  X:41,823,355...41,866,669
JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:3588895 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO (MGI:5514437|PMID:23974041) RGD PMID:23974041 MGI:5514437 NCBI chr 2:121,928,188...122,056,711
Ensembl chr 2:121,927,942...122,056,707
JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in IEA
ISO
GO_REF:0000107
(PMID:20624457)
Ensembl
RGD
PMID:20624457 GO_REF:0000107 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3704067|PMID:17314325)
UniProt
RGD
PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:3704067|PMID:17314325)
UniProt
RGD
PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 acts_upstream_of_or_within ISO MGI:103262 (MGI:5514437|PMID:23974041) RGD PMID:23974041 MGI:5514437 NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO MGI:1917649 (MGI:5514437|PMID:23974041) RGD PMID:23974041 MGI:5514437 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3822373|PMID:19112489)
Ensembl
RGD
PMID:19112489 GO_REF:0000107 MGI:3822373 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Gata3 GATA binding protein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3822373|PMID:19112489)
UniProt
RGD
PMID:19112489 GO_REF:0000024 MGI:3822373 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
renal interstitial fibroblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15821257)
Ensembl
RGD
PMID:15821257 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
renal vesicle progenitor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3826342|PMID:18835385)
UniProt
RGD
PMID:18835385 GO_REF:0000024 MGI:3826342 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    developmental process 6778
      cellular developmental process 4482
        cell differentiation 4387
          cell differentiation involved in kidney development 59
            DCT cell differentiation + 3
            cell differentiation involved in mesonephros development + 0
            cell differentiation involved in metanephros development + 24
            cell differentiation involved in pronephros development + 0
            epithelial cell differentiation involved in kidney development + 49
            juxtaglomerulus cell differentiation + 0
            kidney interstitial fibroblast differentiation + 2
            kidney smooth muscle cell differentiation + 2
            mesangial cell differentiation + 7
            mesenchymal cell differentiation involved in kidney development + 6
            mesenchymal stem cell differentiation involved in nephron morphogenesis + 0
            proximal convoluted tubule segment 1 cell differentiation + 0
            renal vesicle progenitor cell differentiation 1
Path 2
Term Annotations click to browse term
  biological_process 19390
    developmental process 6778
      anatomical structure development 6203
        multicellular organism development 5641
          system development 5310
            urogenital system development 439
              renal system development 390
                kidney development 376
                  cell differentiation involved in kidney development 59
                    DCT cell differentiation + 3
                    cell differentiation involved in mesonephros development + 0
                    cell differentiation involved in metanephros development + 24
                    cell differentiation involved in pronephros development + 0
                    epithelial cell differentiation involved in kidney development + 49
                    juxtaglomerulus cell differentiation + 0
                    kidney interstitial fibroblast differentiation + 2
                    kidney smooth muscle cell differentiation + 2
                    mesangial cell differentiation + 7
                    mesenchymal cell differentiation involved in kidney development + 6
                    mesenchymal stem cell differentiation involved in nephron morphogenesis + 0
                    proximal convoluted tubule segment 1 cell differentiation + 0
                    renal vesicle progenitor cell differentiation 1
paths to the root