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ONTOLOGY REPORT - ANNOTATIONS


Term:cell differentiation involved in kidney development
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Accession:GO:0061005 term browser browse the term
Definition:The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the kidney as it progresses from its formation to the mature state.


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cell differentiation involved in kidney development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:105373 (MGI:MGI:4367286|PMID:19809516) RGD PMID:19809516 MGI:MGI:4367286 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Glis2 GLIS family zinc finger 2 ISO MGI:MGI:3719836 (MGI:MGI:3718754|PMID:17618285) RGD PMID:17618285 MGI:MGI:3718754 NCBI chr10:11,154,459...11,177,063
Ensembl chr10:11,154,658...11,174,861
JBrowse link
G Ptch1 patched 1 ISO MGI:MGI:95729 (MGI:MGI:4367286|PMID:19809516) RGD PMID:19809516 MGI:MGI:4367286 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
cell differentiation involved in metanephros development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISO (MGI:MGI:5006869|PMID:21523854) RGD PMID:21523854 MGI:MGI:5006869 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle ISO
IEA
(PMID:17464107)
GO_REF:0000107
RGD
Ensembl
PMID:17464107 GO_REF:0000107 NCBI chr 1:252,537,614...252,550,394
Ensembl chr 1:252,537,615...252,550,394
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:MGI:1857740 (MGI:MGI:3619287|PMID:16498405) RGD PMID:16498405 MGI:MGI:3619287 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Gpr4 G protein-coupled receptor 4 ISO MGI:MGI:3700206 (MGI:MGI:3699048|PMID:17145776) RGD PMID:17145776 MGI:MGI:3699048 NCBI chr 1:80,125,639...80,136,786
Ensembl chr 1:80,135,391...80,136,880
JBrowse link
G Notch1 notch receptor 1 ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
glomerular parietal epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 ISO (PMID:9530170) RGD PMID:9530170 NCBI chr10:105,282,090...105,289,396 JBrowse link
glomerular parietal epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule ISO
ISS
(PMID:19092120)
GO_REF:0000024
RGD
UniProt
PMID:19092120 GO_REF:0000024 NCBI chr20:48,335,540...48,340,847
Ensembl chr20:48,335,540...48,340,846
JBrowse link
G Prom1 prominin 1 ISO (PMID:19092120) RGD PMID:19092120 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 ISO MGI:MGI:3848348 (MGI:MGI:5647943|PMID:25361754) RGD PMID:25361754 MGI:MGI:5647943 NCBI chr 2:210,861,624...210,874,348
Ensembl chr 2:210,861,625...210,874,304
JBrowse link
G Asxl1 ASXL transcriptional regulator 1 ISO (MGI:MGI:5751943|PMID:26385183) RGD PMID:26385183 MGI:MGI:5751943 NCBI chr 3:148,832,231...148,902,356
Ensembl chr 3:148,837,814...148,900,452
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
(PMID:17442697)
Ensembl
RGD
PMID:17442697 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5498584|PMID:23806616)
Ensembl
UniProt
RGD
PMID:23806616 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5498584 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 IEP PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 4:10,995,241...12,472,423
Ensembl chr 4:10,995,234...11,610,518
JBrowse link
G Myo1e myosin IE ISO
IEA
ISS
(MGI:MGI:4441423|PMID:19005011)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19005011 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4441423 NCBI chr 8:76,644,715...76,840,240
Ensembl chr 8:76,754,492...76,839,593
JBrowse link
G Notch2 notch receptor 2 ISO
IEA
(PMID:15821257)
GO_REF:0000107
RGD
Ensembl
PMID:15821257 GO_REF:0000107 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:88,922,346...88,950,560
Ensembl chr 1:88,922,433...88,950,559
JBrowse link
G Podxl podocalyxin-like IEP PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 4:58,829,049...58,893,353
Ensembl chr 4:58,829,060...58,893,170
JBrowse link
G Wt1 WT1 transcription factor ISO (PMID:18618131) RGD PMID:18618131 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
glomerular visceral epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Basp1 brain abundant, membrane attached signal protein 1 ISO
IEA
(MGI:MGI:4418604|PMID:19050011)
GO_REF:0000107
RGD
Ensembl
PMID:19050011 GO_REF:0000107, MGI:MGI:4418604 NCBI chr 2:77,586,424...77,632,626
Ensembl chr 2:77,586,424...77,632,628
JBrowse link
G Cd24 CD24 molecule ISO
ISS
(PMID:19092120)
GO_REF:0000024
RGD
UniProt
PMID:19092120 GO_REF:0000024 NCBI chr20:48,335,540...48,340,847
Ensembl chr20:48,335,540...48,340,846
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4360160|PMID:18480751) RGD PMID:18480751 MGI:MGI:4360160 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:MGI:1857740 (MGI:MGI:3619287|PMID:16498405) RGD PMID:16498405 MGI:MGI:3619287 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Klf15 Kruppel-like factor 15 ISO (MGI:MGI:5431194|PMID:22493483) RGD PMID:22493483 MGI:MGI:5431194 NCBI chr 4:122,364,688...122,377,690
Ensembl chr 4:122,365,093...122,377,659
JBrowse link
G Prom1 prominin 1 ISO (PMID:19092120) RGD PMID:19092120 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O ISO
IBA
ISS
(MGI:MGI:1927435|PMID:11086029)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:11086029, PMID:21873635 GO_REF:0000024, MGI:MGI:1927435, RGD:13792537 NCBI chr 4:171,250,766...171,461,571
Ensembl chr 4:171,250,818...171,461,677
JBrowse link
G Wt1 WT1 transcription factor ISO
ISS
(MGI:MGI:4418604|PMID:19050011)
GO_REF:0000024
RGD
UniProt
PMID:19050011 GO_REF:0000024, MGI:MGI:4418604 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tshz3 teashirt zinc finger homeobox 3 ISO (MGI:MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:MGI:3806378 NCBI chr 1:92,703,180...92,775,020
Ensembl chr 1:92,703,080...92,774,975
JBrowse link
mesangial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO
ISS
(MGI:MGI:3826342|PMID:18835385)
GO_REF:0000024
RGD
UniProt
PMID:18835385 GO_REF:0000024, MGI:MGI:3826342 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
mesenchymal cell differentiation involved in kidney development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amer1 APC membrane recruitment protein 1 ISO MGI:MGI:2446599|MGI:MGI:5086003 (MGI:MGI:5013668|PMID:21571217) RGD PMID:21571217 MGI:MGI:5013668 NCBI chr  X:64,686,620...64,702,504
Ensembl chr  X:64,686,623...64,702,441
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
(MGI:MGI:3710018|PMID:17442697)
Ensembl
RGD
PMID:17442697 GO_REF:0000107, MGI:MGI:3710018 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Six2 SIX homeobox 2 ISO (MGI:MGI:3691408|PMID:17036046) RGD PMID:17036046 MGI:MGI:3691408 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3611729|PMID:16396903)
Ensembl
UniProt
RGD
PMID:16396903 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3611729 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:10706139)
Ensembl
UniProt
RGD
PMID:10706139 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Gdnf glial cell derived neurotrophic factor IDA
ISO
IEA
PMID:17522159
(PMID:10322633)
GO_REF:0000107
RGD
Ensembl
PMID:10322633, PMID:17522159 GO_REF:0000107, RGD:8656002 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (MGI:MGI:3714585|PMID:17522159) RGD PMID:17522159 MGI:MGI:3714585 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Pax2 paired box 2 ISO
ISS
(PMID:10322633)
GO_REF:0000024
RGD
UniProt
PMID:10322633 GO_REF:0000024 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO (PMID:8861958) RGD PMID:8861958 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO (PMID:11511981)
(MGI:MGI:2149437|PMID:11688560)
RGD PMID:11511981, PMID:11688560 MGI:MGI:2149437 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Six2 SIX homeobox 2 ISO (PMID:10322633) RGD PMID:10322633 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU class 3 homeobox 3 ISO
IEA
ISS
(MGI:MGI:2669573|PMID:12925600)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12925600 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2669573 NCBI chr 9:49,479,148...49,482,246
Ensembl chr 9:49,479,023...49,482,252
JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B ISO
ISS
(MGI:MGI:3039044|PMID:15084468)
GO_REF:0000024
RGD
UniProt
PMID:15084468 GO_REF:0000024, MGI:MGI:3039044 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule ISO (PMID:1868864) RGD PMID:1868864 NCBI chr13:113,691,842...113,711,259
Ensembl chr13:113,691,932...113,711,647
JBrowse link
metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 ISO
IEA
MGI:MGI:2138070 (MGI:MGI:3664526|PMID:16886065)
GO_REF:0000107
RGD
Ensembl
PMID:16886065 GO_REF:0000107, MGI:MGI:3664526 NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin ISO (PMID:11786407) RGD PMID:11786407 NCBI chr13:73,929,136...73,941,522
Ensembl chr13:73,929,136...73,941,522
JBrowse link
metanephric interstitial fibroblast development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO
ISS
(MGI:MGI:3826342|PMID:18835385)
GO_REF:0000024
RGD
UniProt
PMID:18835385 GO_REF:0000024, MGI:MGI:3826342 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO
ISS
(MGI:MGI:3697513|PMID:16790474)
GO_REF:0000024
RGD
UniProt
PMID:16790474 GO_REF:0000024, MGI:MGI:3697513 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:3663200|PMID:16368682)
GO_REF:0000024
RGD
UniProt
PMID:16368682 GO_REF:0000024, MGI:MGI:3663200 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Tcf21 transcription factor 21 ISO
ISS
(MGI:MGI:2651771|PMID:12619136)
GO_REF:0000024
RGD
UniProt
PMID:12619136 GO_REF:0000024, MGI:MGI:2651771 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
negative regulation of epithelial cell differentiation involved in kidney development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 IEA
ISO
GO_REF:0000107
(MGI:MGI:6270954|PMID:24503540)
Ensembl
RGD
PMID:24503540 GO_REF:0000107, MGI:MGI:6270954 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:2388350|PMID:12399320)
Ensembl
UniProt
RGD
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 IMP PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:3714576|PMID:17537789)
GO_REF:0000107
RGD
Ensembl
PMID:17537789 GO_REF:0000107, MGI:MGI:3714576 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:MGI:3603818 (MGI:MGI:5563280|PMID:24550112) RGD PMID:24550112 MGI:MGI:5563280 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
negative regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO
ISS
(MGI:MGI:3697513|PMID:16790474)
GO_REF:0000024
RGD
UniProt
PMID:16790474 GO_REF:0000024, MGI:MGI:3697513 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4440396|PMID:20181743)
Ensembl
UniProt
RGD
PMID:20181743 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4440396 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 ISO
ISS
(MGI:MGI:4440396|PMID:20181743)
GO_REF:0000024
RGD
UniProt
PMID:20181743 GO_REF:0000024, MGI:MGI:4440396 NCBI chr 7:98,820,799...98,960,878
Ensembl chr 7:98,820,812...98,960,837
JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:2388350|PMID:12399320)
Ensembl
UniProt
RGD
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor IEA
ISO
GO_REF:0000107
(MGI:MGI:81286|PMID:8657306)
Ensembl
RGD
PMID:8657306 GO_REF:0000107, MGI:MGI:81286 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Lif LIF, interleukin 6 family cytokine ISO
IEA
(PMID:20624457)
GO_REF:0000107
RGD
Ensembl
PMID:20624457 GO_REF:0000107 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Pax2 paired box 2 ISO
ISS
UniProtKB:Q00288 (MGI:MGI:2445273|PMID:12435636)
GO_REF:0000024
RGD
UniProt
PMID:12435636 GO_REF:0000024, MGI:MGI:2445273 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:2445273|PMID:12435636)
GO_REF:0000024
RGD
UniProt
PMID:12435636 GO_REF:0000024, MGI:MGI:2445273 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
positive regulation of metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISO
ISS
(MGI:MGI:3795840|PMID:18431508)
GO_REF:0000024
RGD
UniProt
PMID:18431508 GO_REF:0000024, MGI:MGI:3795840 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
positive regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule ISO
ISS
(PMID:16885410)
GO_REF:0000024
RGD
UniProt
PMID:16885410 GO_REF:0000024 NCBI chr20:48,335,540...48,340,847
Ensembl chr20:48,335,540...48,340,846
JBrowse link
G Lhx1 LIM homeobox 1 ISO
ISS
(MGI:MGI:3613206|PMID:16216236)
GO_REF:0000024
RGD
UniProt
PMID:16216236 GO_REF:0000024, MGI:MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Prom1 prominin 1 ISO (PMID:16885410) RGD PMID:16885410 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
regulation of epithelial cell differentiation involved in kidney development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkx protein kinase, X-linked ISO (PMID:17980165) RGD PMID:17980165 NCBI chr  X:45,080,963...45,125,095
Ensembl chr  X:45,080,963...45,124,270
JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat4 FAT atypical cadherin 4 ISO (MGI:MGI:5514437|PMID:23974041) RGD PMID:23974041 MGI:MGI:5514437 NCBI chr 2:125,751,818...125,879,398
Ensembl chr 2:125,752,130...125,879,387
JBrowse link
G Lif LIF, interleukin 6 family cytokine ISO
IEA
(PMID:20624457)
GO_REF:0000107
RGD
Ensembl
PMID:20624457 GO_REF:0000107 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 ISO MGI:MGI:103262 (MGI:MGI:5514437|PMID:23974041) RGD PMID:23974041 MGI:MGI:5514437 NCBI chr 2:147,577,149...147,693,033
Ensembl chr 2:147,577,089...147,693,082
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO MGI:MGI:1917649 (MGI:MGI:5514437|PMID:23974041) RGD PMID:23974041 MGI:MGI:5514437 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:3822373|PMID:19112489)
Ensembl
RGD
PMID:19112489 GO_REF:0000107, MGI:MGI:3822373 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3822373|PMID:19112489)
GO_REF:0000024
RGD
UniProt
PMID:19112489 GO_REF:0000024, MGI:MGI:3822373 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
renal interstitial fibroblast development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
(PMID:15821257)
Ensembl
RGD
PMID:15821257 GO_REF:0000107 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
renal vesicle progenitor cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISO
ISS
(MGI:MGI:3826342|PMID:18835385)
GO_REF:0000024
RGD
UniProt
PMID:18835385 GO_REF:0000024, MGI:MGI:3826342 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      cellular developmental process 4459
        cell differentiation 4363
          cell differentiation involved in kidney development 57
            DCT cell differentiation + 3
            cell differentiation involved in mesonephros development + 0
            cell differentiation involved in metanephros development + 24
            cell differentiation involved in pronephros development + 0
            epithelial cell differentiation involved in kidney development + 47
            juxtaglomerulus cell differentiation + 0
            kidney interstitial fibroblast differentiation + 2
            kidney smooth muscle cell differentiation + 2
            mesangial cell differentiation + 7
            mesenchymal cell differentiation involved in kidney development + 6
            mesenchymal stem cell differentiation involved in nephron morphogenesis + 0
            proximal convoluted tubule segment 1 cell differentiation + 0
            renal vesicle progenitor cell differentiation 1
Path 2
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            urogenital system development 432
              renal system development 382
                kidney development 368
                  cell differentiation involved in kidney development 57
                    DCT cell differentiation + 3
                    cell differentiation involved in mesonephros development + 0
                    cell differentiation involved in metanephros development + 24
                    cell differentiation involved in pronephros development + 0
                    epithelial cell differentiation involved in kidney development + 47
                    juxtaglomerulus cell differentiation + 0
                    kidney interstitial fibroblast differentiation + 2
                    kidney smooth muscle cell differentiation + 2
                    mesangial cell differentiation + 7
                    mesenchymal cell differentiation involved in kidney development + 6
                    mesenchymal stem cell differentiation involved in nephron morphogenesis + 0
                    proximal convoluted tubule segment 1 cell differentiation + 0
                    renal vesicle progenitor cell differentiation 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.