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ONTOLOGY REPORT - ANNOTATIONS

Term:kidney morphogenesis
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Accession:GO:0060993 term browser browse the term
Definition:Morphogenesis of a kidney. A kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.


show annotations for term's descendants           Sort by:
kidney morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in IMP
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:18495111 GO_REF:0000117, RGD:6903962 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:116,913,656...116,918,745 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:14644620) RGD PMID:14644620 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:57,961,423...57,998,901 		JBrowse link
G Gcnt1 glucosaminyl (N-acetyl) transferase 1 acts_upstream_of_or_within ISO MGI:1919327|MGI:2684919 (PMID:19349303) RGD PMID:19349303 NCBI chr 1:224,145,104...224,182,496
Ensembl chr 1:224,141,108...224,185,741 		JBrowse link
G Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type acts_upstream_of_or_within ISO MGI:2684919|MGI:95676 (PMID:19349303) RGD PMID:19349303 NCBI chr 8:79,570,081...79,577,389
Ensembl chr 8:79,566,753...79,581,595 		JBrowse link
G Gcnt4 glucosaminyl (N-acetyl) transferase 4 acts_upstream_of_or_within ISO MGI:1919327|MGI:95676 (PMID:19349303) RGD PMID:19349303 NCBI chr 2:29,987,944...30,017,708
Ensembl chr 2:29,984,327...30,017,982 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:98957 (PMID:23362348) 		Ensembl
RGD		 PMID:23362348 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361 		JBrowse link
G Nphp3 nephrocystin 3 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:18371931)
MGI:6159873 (PMID:29395339)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000033 		RGD
UniProt
Ensembl
GO_Central		 PMID:18371931 PMID:29395339 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:113,500,708...113,541,179
Ensembl chr 8:113,500,509...113,541,179 		JBrowse link
G Prkx protein kinase cAMP-dependent X-linked catalytic subunit involved_in ISO (PMID:17980165) RGD PMID:17980165 NCBI chr  X:45,701,747...45,745,210
Ensembl chr  X:45,701,747...45,745,066 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:16109771) RGD PMID:16109771 NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,875,756...35,884,024 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO MGI:3810527 (PMID:18776146) RGD PMID:18776146 NCBI chr 1:98,525,584...98,597,428
Ensembl chr 1:98,518,681...98,598,007 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1857642 (PMID:20843830) 		Ensembl
RGD		 PMID:20843830 GO_REF:0000107 NCBI chr13:86,995,124...87,021,770
Ensembl chr13:86,997,920...87,021,770 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:98505 (PMID:23362348) 		Ensembl
RGD		 PMID:23362348 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:154,797,311...154,817,128 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526436|MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:89,135,363...89,157,065 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:3759999 (PMID:17636028) 		Ensembl
RGD		 PMID:17636028 GO_REF:0000107 NCBI chr 2:143,801,181...143,916,941
Ensembl chr 2:143,801,181...143,991,950 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:2180033 (PMID:11923874) 		Ensembl
RGD		 PMID:11923874 GO_REF:0000107 NCBI chr 5:139,912,395...139,945,532
Ensembl chr 5:139,913,671...139,945,532 		JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 involved_in ISO
ISS 		(PMID:11731227)
GO_REF:0000024 		RGD
UniProt		 PMID:11731227 GO_REF:0000024 NCBI chr18:30,937,670...31,023,786
Ensembl chr18:30,939,870...30,961,393 		JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:23661704) 		Ensembl
RGD		 PMID:23661704 GO_REF:0000107 NCBI chr 1:34,258,899...34,388,952
Ensembl chr 1:34,258,899...34,388,952 		JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:12657564) RGD PMID:12657564 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:69,421,638...69,446,944 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:97486 (PMID:14699151), (PMID:16672320) RGD PMID:14699151 PMID:16672320 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:23,204,464...23,366,900 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:104903 (PMID:15925496) 		Ensembl
RGD		 PMID:15925496 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:141,264,646...141,274,760 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within 		ISO
IEA
ISS 		(PMID:12631064)
MGI:1344337 (PMID:17522159)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:12631064 PMID:17522159 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172 		JBrowse link
G Cd44 CD44 molecule acts_upstream_of_or_within ISO (PMID:10926769) RGD PMID:10926769 NCBI chr 3:109,610,824...109,699,776
Ensembl chr 3:109,612,054...109,699,424 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in
NOT|involved_in 		IMP
ISO 		PMID:15843474
(PMID:17615577) 		RGD PMID:17615577 PMID:15843474 RGD:8554075 NCBI chr  X:71,390,328...71,395,023
Ensembl chr  X:71,390,331...71,393,649 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 NOT|involved_in ISO (PMID:17615577) RGD PMID:17615577 NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:14,103,457...14,134,782 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1858008 (PMID:17537789) 		Ensembl
RGD		 PMID:17537789 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662 		JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:3045424 (PMID:17803964) 		Ensembl
RGD		 PMID:17803964 GO_REF:0000107 NCBI chr 5:165,245,019...165,293,994
Ensembl chr 5:165,245,098...165,293,991 		JBrowse link
G Dchs1 dachsous cadherin-related 1 acts_upstream_of_or_within
involved_in 		IEA
ISO 		GO_REF:0000107
MGI:4867020 (PMID:21303848)
GO_REF:0000117 		Ensembl
RGD
UniProt		 PMID:21303848 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:169,516,758...169,550,789
Ensembl chr 1:169,516,762...169,536,639 		JBrowse link
G Dchs2 dachsous cadherin-related 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:170,775,818...170,983,844
Ensembl chr 2:170,776,682...170,981,770 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:2680670|MGI:3699270|MGI:3710242 (PMID:16105026), (PMID:17172448), (PMID:17435047) 		Ensembl
RGD		 PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797
Ensembl chr11:82,416,853...82,607,797 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (PMID:16937369) RGD PMID:16937369 NCBI chr14:5,870,232...5,876,339
Ensembl chr14:5,870,232...5,876,339 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780 (PMID:12783782) RGD PMID:12783782 NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:9,646,591...9,884,614 		JBrowse link
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within
involved_in 		IEA
ISO 		GO_REF:0000107
MGI:3846573 (PMID:21303848)
GO_REF:0000117 		Ensembl
RGD
UniProt		 PMID:21303848 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:123,855,289...123,984,716
Ensembl chr 2:123,855,289...123,984,716 		JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:12631064) 		UniProt
Ensembl
RGD		 PMID:12631064 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:122,164,454...122,224,493 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:2150348 (PMID:16049111) 		Ensembl
RGD		 PMID:16049111 GO_REF:0000107 NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:254,533,504...254,539,605 		JBrowse link
G Foxd1 forkhead box D1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:13678594) 		Ensembl
RGD		 PMID:13678594 GO_REF:0000107 NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:31,436,813...31,439,399 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within 		ISS
ISO 		GO_REF:0000024
(PMID:8657307)
(PMID:13678594), (PMID:21281623) 		UniProt
RGD		 PMID:8657307 PMID:13678594 PMID:21281623 GO_REF:0000024 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:98297 (PMID:16396903) 		Ensembl
RGD		 PMID:16396903 GO_REF:0000107 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:54,134,064...54,405,198 		JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:88177|MGI:894293 (PMID:15925496) 		Ensembl
RGD		 PMID:15925496 GO_REF:0000107 NCBI chr  X:136,789,770...137,157,598
Ensembl chr  X:136,789,770...137,157,639 		JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:29100091) 		Ensembl
RGD		 PMID:29100091 GO_REF:0000107 NCBI chr18:1,665,468...1,902,291
Ensembl chr18:1,766,214...1,900,178 		JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:14522971) 		Ensembl
RGD		 PMID:14522971 GO_REF:0000107 NCBI chr 3:156,572,152...156,584,369
Ensembl chr 3:156,572,250...156,584,363 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:96203 (PMID:11493536) 		Ensembl
RGD		 PMID:11493536 GO_REF:0000107 NCBI chr 4:82,673,139...82,676,801
Ensembl chr 4:82,673,140...82,676,844 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (PMID:11493536) RGD PMID:11493536 NCBI chr 3:79,992,394...79,994,688
Ensembl chr 3:79,992,394...79,994,688 		JBrowse link
G Hs3st3a1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in IEA
ISO 		GO_REF:0000107
MGI:1333853 (PMID:32017326) 		Ensembl
RGD		 PMID:32017326 GO_REF:0000107 NCBI chr10:49,593,208...49,679,854
Ensembl chr10:49,593,009...49,679,854 		JBrowse link
G Hs3st3b1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in IEA
ISO 		GO_REF:0000107
MGI:1333861 (PMID:32017326) 		Ensembl
RGD		 PMID:32017326 GO_REF:0000107 NCBI chr10:49,060,693...49,093,185
Ensembl chr10:49,060,693...49,093,185 		JBrowse link
G Ilk integrin-linked kinase acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:15831470) 		Ensembl
RGD		 PMID:15831470 GO_REF:0000107 NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:169,498,681...169,506,964 		JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:14568553) 		Ensembl
RGD		 PMID:14568553 GO_REF:0000107 NCBI chr 3:187,647,904...187,695,974
Ensembl chr 3:187,647,904...187,696,173 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:7909549) 		Ensembl
RGD		 PMID:7909549 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO 		GO_REF:0000024
(PMID:19161241) 		UniProt
RGD		 PMID:19161241 GO_REF:0000024 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:95,483,105...95,488,028 		JBrowse link
G Npnt nephronectin acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:3715213 (PMID:17537792) 		Ensembl
RGD		 PMID:17537792 GO_REF:0000107 NCBI chr 2:224,065,191...224,133,567
Ensembl chr 2:224,065,191...224,133,435 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within 		ISO
ISS 		(PMID:1337742)
MGI:1857114|MGI:88138 (PMID:16672320)
GO_REF:0000024 		RGD
UniProt		 PMID:1337742 PMID:16672320 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:12591246) 		Ensembl
RGD		 PMID:12591246 GO_REF:0000107 NCBI chr13:82,811,664...83,121,447
Ensembl chr13:82,812,131...83,121,066 		JBrowse link
G Pgf placental growth factor acts_upstream_of_or_within ISO (PMID:13678594) RGD PMID:13678594 NCBI chr 6:110,547,165...110,557,747
Ensembl chr 6:110,547,153...110,557,747 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,495,401...5,587,594 		JBrowse link
G Pspn persephin acts_upstream_of_or_within ISO (PMID:9491986) RGD PMID:9491986 NCBI chr 9:1,927,911...1,930,785
Ensembl chr 9:1,927,911...1,928,752 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1857447 (PMID:19809516) 		Ensembl
RGD		 PMID:19809516 GO_REF:0000107 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,548,449...1,613,461 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:12482961) RGD PMID:12482961 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA 		GO_REF:0000024
MGI:1857796 (PMID:16396903)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:7,687,846...7,697,901 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:109344 (PMID:12783782) 		Ensembl
RGD		 PMID:12783782 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:104903|MGI:88177 (PMID:15925496) 		Ensembl
RGD		 PMID:15925496 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:69,518,988...69,549,684 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in IEA
ISO 		GO_REF:0000107
(PMID:8787755) 		Ensembl
RGD		 PMID:8787755 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:98,305,744...98,311,250 		JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA 		GO_REF:0000024
MGI:2148207 (PMID:10572052), (PMID:9507058)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:9507058 PMID:10572052 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:24,520,499...24,523,358
Ensembl chr 1:24,520,481...24,523,348 		JBrowse link
G Timeless timeless circadian regulator acts_upstream_of_or_within IMP PMID:10963667 RGD
MGI		 PMID:10963667 PMID:10963667 RGD:2308864, RGD:2308864 NCBI chr 7:1,239,388...1,263,344
Ensembl chr 7:1,239,450...1,263,337 		JBrowse link
G Tmem59l transmembrane protein 59-like involved_in IEA
ISO 		GO_REF:0000107
MGI:6441470 (PMID:32017326) 		Ensembl
RGD		 PMID:32017326 GO_REF:0000107 NCBI chr16:18,975,217...18,979,354
Ensembl chr16:18,974,709...18,981,586 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1197020 (PMID:16054034) 		Ensembl
RGD		 PMID:16054034 GO_REF:0000107 NCBI chr 7:131,817,558...131,821,605
Ensembl chr 7:131,817,558...131,821,605 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:16054034) 		Ensembl
RGD		 PMID:16054034 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:154,797,311...154,817,128 		JBrowse link
G Wnt6 Wnt family member 6 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:98957 (PMID:11948913) 		Ensembl
RGD		 PMID:11948913 GO_REF:0000107 NCBI chr 9:83,778,552...83,792,186
Ensembl chr 9:83,778,552...83,792,186 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437|MGI:98953 (PMID:16054034) RGD PMID:16054034 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:89,135,363...89,157,065 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:10101119)
GO_REF:0000107
UniProtKB:P22561 (PMID:10101119) 		UniProt
RGD
Ensembl		 PMID:10101119 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:112,021,641...112,068,444 		JBrowse link
comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15821257) 		Ensembl
RGD		 PMID:15821257 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:170,803,940...170,806,021 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:95,002,943...95,007,624 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17610272)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17610272 GO_REF:0000024 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:15634693)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:15634693 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:31,436,813...31,439,399 		JBrowse link
distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl3 kelch-like family member 3 involved_in ISO
IEA
ISS 		(PMID:22406640), (PMID:23453970), (PMID:23576762)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:22406640 PMID:23453970 PMID:23576762 GO_REF:0000024 GO_REF:0000107 NCBI chr17:6,528,114...6,651,338
Ensembl chr17:6,528,487...6,651,338 		JBrowse link
G Wnk4 WNK lysine deficient protein kinase 4 involved_in ISO
IEA
ISS 		(PMID:23453970), (PMID:23576762)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:23453970 PMID:23576762 GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,702,828...86,719,917
Ensembl chr10:86,702,865...86,720,198 		JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:2445461|MGI:2680217 (PMID:22076439) 		Ensembl
RGD		 PMID:22076439 GO_REF:0000107 NCBI chr 9:76,973,386...78,045,633
Ensembl chr 9:76,973,227...78,045,772 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437|MGI:3805020 (PMID:19543268) RGD PMID:19543268 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:89,135,363...89,157,065 		JBrowse link
kidney rudiment formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:89,135,363...89,157,065 		JBrowse link
mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:182,052,337...182,135,137 		JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278 		JBrowse link
mesenchymal stem cell maintenance involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 involved_in ISO (PMID:18682239), (PMID:21350016), (PMID:22902740), (PMID:24598167) RGD PMID:18682239 PMID:21350016 PMID:22902740 PMID:24598167 NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:14,727,859...14,731,941 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:21350016) RGD PMID:21350016 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:89,135,363...89,157,065 		JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:16396903)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281 		JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IDA
ISO
IEA 		PMID:17522159
(PMID:10322633)
GO_REF:0000117 		RGD
UniProt		 PMID:10322633 PMID:17522159 GO_REF:0000117, RGD:8656002 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:17522159) RGD PMID:17522159 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:120,966,623...120,979,089 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:10322633) 		UniProt
RGD		 PMID:10322633 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:8861958) RGD PMID:8861958 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO
IEA 		(PMID:11511981)
(PMID:11688560)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:11511981 PMID:11688560 GO_REF:0000107 GO_REF:0000117 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (PMID:10322633) RGD PMID:10322633 NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:14,727,859...14,731,941 		JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1857856 (PMID:20040500) 		Ensembl
RGD		 PMID:20040500 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361 		JBrowse link
G Mir216a microRNA 216a involved_in ISO MGI:6361469 (PMID:31367007) RGD PMID:31367007 NCBI chr14:106,725,077...106,725,182
Ensembl chr14:106,725,077...106,725,182 		JBrowse link
G Mir216b microRNA 216b involved_in ISO MGI:6361477 (PMID:31367007) RGD PMID:31367007 NCBI chr14:106,714,026...106,714,127
Ensembl chr14:106,714,026...106,714,127 		JBrowse link
G Mir217 microRNA 217 involved_in ISO (PMID:31367007) RGD PMID:31367007 NCBI chr14:106,732,485...106,732,589
Ensembl chr14:106,732,485...106,732,589 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:89,135,363...89,157,065 		JBrowse link
mesonephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA 		GO_REF:0000024
MGI:2159356 (PMID:11180950)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:11180950 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:136,789,770...137,157,598
Ensembl chr  X:136,789,770...137,157,639 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:16790474)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:16790474 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:38,093,011...38,100,021 		JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Six1 SIX homeobox 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:17300925) 		Ensembl
RGD		 PMID:17300925 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853 		JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in IEP PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IEP PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:56,770,348...56,809,233 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (PMID:18618131) RGD PMID:18618131 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:112,021,641...112,068,444 		JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO
IEA 		(PMID:11891195)
GO_REF:0000107 		RGD
Ensembl		 PMID:11891195 GO_REF:0000107 NCBI chr10:14,077,733...14,125,682
Ensembl chr10:14,078,679...14,125,681 		JBrowse link
metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:4399122 (PMID:19830824) 		Ensembl
RGD		 PMID:19830824 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:154,797,311...154,817,128 		JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:17314325) 		UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17314325)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA 		GO_REF:0000024
MGI:98371 (PMID:21212101)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,089,357...15,094,345
Ensembl chr10:15,089,357...15,094,345 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within 		ISS
ISO
IEA 		GO_REF:0000024
MGI:98370 (PMID:21212101)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:98,305,744...98,311,250 		JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15465493) 		Ensembl
RGD		 PMID:15465493 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15465493) RGD PMID:15465493 NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:170,803,940...170,806,021 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:21523854) 		Ensembl
RGD		 PMID:21523854 GO_REF:0000107 NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:116,901,968...117,004,153 		JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:18618131) 		Ensembl
RGD		 PMID:18618131 GO_REF:0000107 NCBI chr 5:34,172,612...34,199,555
Ensembl chr 5:34,172,664...34,200,160 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO
IEA 		(PMID:9530170)
GO_REF:0000107 		RGD
Ensembl		 PMID:9530170 GO_REF:0000107 NCBI chr10:102,065,163...102,069,945
Ensembl chr10:102,065,170...102,069,241 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in IEP PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,495,401...5,587,594 		JBrowse link
metanephric renal vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:7909549) 		Ensembl
RGD		 PMID:7909549 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in IEP
ISO
IEA 		PMID:9496787
(PMID:7909549)
GO_REF:0000107 		RGD
Ensembl		 PMID:7909549 PMID:9496787 GO_REF:0000107, RGD:8553921 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in IEP PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:56,770,348...56,809,233 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,495,401...5,587,594 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO
IEA
ISS 		UniProtKB:P22561 (PMID:10101119)
(PMID:10101119), (PMID:18618131)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:10101119 PMID:18618131 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:112,021,641...112,068,444 		JBrowse link
metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:19060336) 		Ensembl
RGD		 PMID:19060336 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1859647 (PMID:11062007) 		Ensembl
RGD		 PMID:11062007 GO_REF:0000107 NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:52,533,939...52,610,980 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:5463442 (PMID:23469164) 		Ensembl
RGD		 PMID:23469164 GO_REF:0000107 NCBI chr14:13,095,370...13,506,895
Ensembl chr14:13,095,370...13,504,664 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:19060336) RGD PMID:19060336 NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:118,514,684...118,559,316 		JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within 		IEA
ISO
ISS 		GO_REF:0000107
(PMID:15634693)
MGI:102780 (PMID:21281623)
(PMID:12141440)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:12141440 PMID:15634693 PMID:21281623 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172 		JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:22194864) 		UniProt
RGD		 PMID:22194864 GO_REF:0000024 NCBI chr 4:98,037,620...98,039,320
Ensembl chr 4:98,033,251...98,039,323 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:19112489) 		Ensembl
RGD		 PMID:19112489 GO_REF:0000107 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:73,553,548...73,575,670 		JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:19112489) 		Ensembl
RGD		 PMID:19112489 GO_REF:0000107 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:73,553,548...73,575,670 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1857856 (PMID:20040500) 		Ensembl
RGD		 PMID:20040500 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:17314325) 		UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17314325)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1857654 (PMID:9056639) 		Ensembl
RGD		 PMID:9056639 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:182,052,337...182,135,137 		JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in IMP PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:71,390,328...71,395,023
Ensembl chr  X:71,390,331...71,393,649 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:17537789) 		Ensembl
RGD		 PMID:17537789 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278 		JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:12141440)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:12141440 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172 		JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:12141440) 		UniProt
Ensembl
RGD		 PMID:12141440 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172 		JBrowse link
nephron epithelium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six1 SIX homeobox 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853 		JBrowse link
nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 involved_in ISO (PMID:17036046) RGD PMID:17036046 NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:14,727,859...14,731,941 		JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1858008 (PMID:17537789) 		Ensembl
RGD		 PMID:17537789 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662 		JBrowse link
G Wnt6 Wnt family member 6 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:11948913) 		Ensembl
RGD		 PMID:11948913 GO_REF:0000107 NCBI chr 9:83,778,552...83,792,186
Ensembl chr 9:83,778,552...83,792,186 		JBrowse link
nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437|MGI:3805020 (PMID:19543268) RGD PMID:19543268 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:89,135,363...89,157,065 		JBrowse link
G Wt1 WT1 transcription factor involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:112,021,641...112,068,444 		JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO
IEA 		(PMID:18607644)
GO_REF:0000107 		RGD
Ensembl		 PMID:18607644 GO_REF:0000107 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:69,421,638...69,446,944 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in IMP
IEA 		PMID:17537984
GO_REF:0000117 		UniProt PMID:17537984 GO_REF:0000117, RGD:1643596 NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,381,467...34,435,660 		JBrowse link
G Agtr1b angiotensin II receptor, type 1b involved_in IMP
IEA 		PMID:17537984
GO_REF:0000117 		UniProt PMID:17537984 GO_REF:0000117, RGD:1643596 NCBI chr 2:104,774,005...104,849,262
Ensembl chr 2:104,773,930...104,849,310 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 involved_in IMP
IEA
ISO 		PMID:17537984
GO_REF:0000117
(PMID:18607644) 		UniProt
RGD		 PMID:18607644 PMID:17537984 GO_REF:0000117, RGD:1643596 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:116,913,656...116,918,745 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IMP
ISO
IEA
IBA
IDA 		PMID:17537984
(PMID:17229286)
GO_REF:0000117
GO_REF:0000033
PMID:17522159
(PMID:17229286), (PMID:8657307) 		RGD
UniProt
GO_Central		 PMID:8657307 PMID:17229286 PMID:17537984 PMID:17522159 GO_REF:0000033 GO_REF:0000117, RGD:1643596, RGD:8656002 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in 		ISO MGI:88180 (PMID:17522159), (PMID:21281623) RGD PMID:17522159 PMID:21281623 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:120,966,623...120,979,089 		JBrowse link
G Hoxb7 homeo box B7 involved_in IEA
ISO 		GO_REF:0000107
(PMID:17881463) 		Ensembl
RGD		 PMID:17881463 GO_REF:0000107 NCBI chr10:81,749,159...81,752,577
Ensembl chr10:81,749,097...81,752,550 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:21523854) 		Ensembl
RGD		 PMID:21523854 GO_REF:0000107 NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:116,901,968...117,004,153 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:16216236)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:16216236 GO_REF:0000024 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
G Maged1 MAGE family member D1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:19268530) 		Ensembl
RGD		 PMID:19268530 GO_REF:0000107 NCBI chr  X:63,416,464...63,423,167
Ensembl chr  X:63,416,466...63,423,112 		JBrowse link
G Nog noggin involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:12141440), (PMID:17522159)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:12141440 PMID:17522159 GO_REF:0000024 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,625,875...74,628,103 		JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:17314325), (PMID:17881463) RGD PMID:17314325 PMID:17881463 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17314325)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17314325 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278 		JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within 		IEA
ISO 		GO_REF:0000107
(PMID:17300925)
MGI:88180 (PMID:21281623) 		Ensembl
RGD		 PMID:17300925 PMID:21281623 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:97,538,202...97,551,872 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:16396903)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:16396903 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:59,311,041...59,341,281 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21212101)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,089,357...15,094,345
Ensembl chr10:15,089,357...15,094,345 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21212101)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:98,305,744...98,311,250 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:90,324,046...90,340,899 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:16291795) RGD PMID:16291795 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:22,439,392...22,468,194 		JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:11507767) 		Ensembl
RGD		 PMID:11507767 GO_REF:0000107 NCBI chr 2:195,142,573...195,156,945
Ensembl chr 2:195,135,176...195,157,144 		JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in ISO (PMID:8657306) RGD PMID:8657306 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240 		JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in ISO (PMID:20624457) RGD PMID:20624457 NCBI chr14:83,354,602...83,364,053
Ensembl chr14:83,358,164...83,364,053 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO 		GO_REF:0000024
UniProtKB:Q00288 (PMID:12435636) 		UniProt
RGD		 PMID:12435636 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:12435636)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:12435636 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor involved_in ISS
ISO 		GO_REF:0000024
(PMID:8395349) 		UniProt
RGD		 PMID:8395349 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:112,021,641...112,068,444 		JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:19112489) 		Ensembl
RGD		 PMID:19112489 GO_REF:0000107 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:73,553,548...73,575,670 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISS
ISO 		GO_REF:0000024
(PMID:8657307) 		UniProt
RGD		 PMID:8657307 GO_REF:0000024 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240 		JBrowse link
G Six1 SIX homeobox 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:17300925) 		Ensembl
RGD		 PMID:17300925 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:97,538,202...97,551,872 		JBrowse link
primary ureteric bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lzts2 leucine zipper tumor suppressor 2 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:5302222 (PMID:21949185) 		Ensembl
RGD		 PMID:21949185 GO_REF:0000107 NCBI chr 1:253,824,073...253,837,614
Ensembl chr 1:253,829,119...253,837,632 		JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:12435636) 		UniProt
RGD		 PMID:12435636 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:12435636)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:12435636 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
proximal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd5 COMM domain containing 5 involved_in IDA PMID:24515317 UniProt PMID:24515317 RGD:10047245 NCBI chr 7:110,502,492...110,503,916
Ensembl chr 7:110,479,403...110,505,897 		JBrowse link
G Ctns cystinosin, lysosomal cystine transporter IMP RGD PMID:35695380 RGD:155630629 NCBI chr10:58,300,069...58,315,725
Ensembl chr10:58,299,967...58,321,661 		JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1857856 (PMID:20040500) 		Ensembl
RGD		 PMID:20040500 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361 		JBrowse link
G Six1 SIX homeobox 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:17300925) 		Ensembl
RGD		 PMID:17300925 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) RGD PMID:17300925 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:97,538,202...97,551,872 		JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:22,098,470...22,105,172 		JBrowse link
G Six1 SIX homeobox 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (PMID:17036046) RGD PMID:17036046 NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:14,727,859...14,731,941 		JBrowse link
regulation of cell proliferation involved in kidney morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISS
ISO 		GO_REF:0000024
(PMID:15509543) 		UniProt
RGD		 PMID:15509543 GO_REF:0000024 NCBI chr 2:227,839,058...228,113,560
Ensembl chr 2:227,839,062...228,113,554 		JBrowse link
regulation of kidney size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:26385183) 		Ensembl
RGD		 PMID:26385183 GO_REF:0000107 NCBI chr 3:162,273,828...162,341,742
Ensembl chr 3:162,273,828...162,341,742 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:20457918) 		Ensembl
RGD		 PMID:20457918 GO_REF:0000107 NCBI chr 7:124,706,246...124,867,234
Ensembl chr 7:124,706,080...124,867,239 		JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:89,135,362...89,157,065
Ensembl chr10:89,135,363...89,157,065 		JBrowse link
regulation of metanephros size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in ISO (PMID:18607644) RGD PMID:18607644 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:116,913,656...116,918,745 		JBrowse link
G Pax2 paired box 2 involved_in ISO
ISS 		(PMID:17513325)
(PMID:17881463)
GO_REF:0000024 		RGD
UniProt		 PMID:17513325 PMID:17881463 GO_REF:0000024 NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:253,555,418...253,645,438 		JBrowse link
regulation of pronephros size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1a HNF1 homeobox A NOT|involved_in ISO (PMID:15355349) RGD PMID:15355349 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:47,306,245...47,332,755 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in ISO
IEA 		(PMID:15355349)
GO_REF:0000107 		RGD
Ensembl		 PMID:15355349 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361 		JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IDA PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240 		JBrowse link
renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1858008 (PMID:17537789) 		Ensembl
RGD		 PMID:17537789 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:16054034) 		Ensembl
RGD		 PMID:16054034 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:154,797,311...154,817,128 		JBrowse link
renal vesicle induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox8 SRY-box transcription factor 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21212101)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:15,089,357...15,094,345
Ensembl chr10:15,089,357...15,094,345 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21212101)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr10:98,305,744...98,311,250
Ensembl chr10:98,305,744...98,311,250 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:11507767) 		Ensembl
RGD		 PMID:11507767 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:154,797,311...154,817,128 		JBrowse link
renal vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17610272)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17610272 GO_REF:0000024 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (PMID:16937369) RGD PMID:16937369 NCBI chr14:5,870,232...5,876,339
Ensembl chr14:5,870,232...5,876,339 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15821257) 		Ensembl
RGD		 PMID:15821257 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:170,803,940...170,806,021 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:95,002,943...95,007,624 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17610272)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17610272 GO_REF:0000024 GO_REF:0000107 NCBI chr10:69,894,288...69,901,076
Ensembl chr10:69,894,288...69,901,076 		JBrowse link
G Pax8 paired box 8 involved_in IEA
ISO 		GO_REF:0000107
(PMID:1723950) 		Ensembl
RGD		 PMID:1723950 GO_REF:0000107 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:27,584,002...27,640,631 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:16790474)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:16790474 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:38,093,011...38,100,021 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 involved_in ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:170,803,940...170,806,021 		JBrowse link
G Irx1 iroquois homeobox 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:17875669) 		Ensembl
RGD		 PMID:17875669 GO_REF:0000107 NCBI chr 1:33,123,122...33,128,951
Ensembl chr 1:33,123,122...33,128,951 		JBrowse link
G Irx2 iroquois homeobox 2 involved_in ISO (PMID:17875669) RGD PMID:17875669 NCBI chr 1:32,489,512...32,494,930
Ensembl chr 1:32,489,512...32,494,930 		JBrowse link
G Irx3 iroquois homeobox 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:17875669) 		Ensembl
RGD		 PMID:17875669 GO_REF:0000107 NCBI chr19:31,384,803...31,388,241
Ensembl chr19:31,384,833...31,388,238 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:16790474)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:16790474 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:38,093,011...38,100,021 		JBrowse link
ureteric bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1857856 (PMID:20040500) 		Ensembl
RGD		 PMID:20040500 GO_REF:0000107 NCBI chr10:69,233,377...69,287,360
Ensembl chr10:69,233,131...69,287,361 		JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:16319112) 		Ensembl
RGD		 PMID:16319112 GO_REF:0000107 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:73,553,548...73,575,670 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO (PMID:8657307) RGD PMID:8657307 NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:58,621,327...58,647,240 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:17522159) RGD PMID:17522159 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:120,966,623...120,979,089 		JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:1934916 (PMID:9637690) 		Ensembl
RGD		 PMID:9637690 GO_REF:0000107 NCBI chr 2:236,168,391...236,302,186
Ensembl chr 2:236,168,392...236,302,133 		JBrowse link
G Nog noggin involved_in IEA
ISO 		GO_REF:0000107
(PMID:17522159) 		Ensembl
RGD		 PMID:17522159 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,625,875...74,628,103 		JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 acts_upstream_of_or_within ISO (PMID:7517224) RGD PMID:7517224 NCBI chr 3:120,555,445...120,939,978
Ensembl chr 3:120,555,431...120,933,124 		JBrowse link
G Kif26b kinesin family member 26B acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:4459557 (PMID:20439720) 		Ensembl
RGD		 PMID:20439720 GO_REF:0000107 NCBI chr13:92,815,427...93,221,071
Ensembl chr13:92,815,427...93,215,453 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in
acts_upstream_of_or_within 		ISO (PMID:11688560), (PMID:16839447)
MGI:2388379 (PMID:16839447) 		RGD PMID:11688560 PMID:16839447 NCBI chr19:34,179,316...34,196,278
Ensembl chr19:34,181,078...34,196,278 		JBrowse link
ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15821257) 		Ensembl
RGD		 PMID:15821257 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:84,210,633...84,213,061 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:95,002,943...95,007,624 		JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in ISO (PMID:22194864) RGD PMID:22194864 NCBI chr 4:98,037,620...98,039,320
Ensembl chr 4:98,033,251...98,039,323 		JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO
IEA 		(PMID:9757009)
GO_REF:0000107 		RGD
Ensembl		 PMID:9757009 GO_REF:0000107 NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:162,545,680...162,564,660 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    developmental process 7255
      anatomical structure morphogenesis 3075
        animal organ morphogenesis 1184
          kidney morphogenesis 116
            kidney rudiment formation + 3
            mesonephros morphogenesis + 1
            metanephros morphogenesis + 31
            nephron morphogenesis + 96
            pronephros morphogenesis + 2
            regulation of cell proliferation involved in kidney morphogenesis 1
            regulation of kidney size + 6
Path 2
Term Annotations click to browse term
  biological_process 19315
    developmental process 7255
      anatomical structure development 6748
        multicellular organism development 5415
          system development 4702
            renal system development 423
              kidney development 410
                kidney morphogenesis 116
                  kidney rudiment formation + 3
                  mesonephros morphogenesis + 1
                  metanephros morphogenesis + 31
                  nephron morphogenesis + 96
                  pronephros morphogenesis + 2
                  regulation of cell proliferation involved in kidney morphogenesis 1
                  regulation of kidney size + 6
paths to the root