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ONTOLOGY REPORT - ANNOTATIONS

Term:cardiac cell fate commitment
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Accession:GO:0060911 term browser browse the term
Definition:The commitment of cells to specific cardiac cell fates and their capacity to differentiate into cardiac cells. Cardiac cells are cells that comprise the organ which pumps blood through the circulatory system.
Synonyms:exact_synonym: cardiocyte cell fate commitment


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atrioventricular node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO (PMID:15109497) MGI PMID:15109497 NCBI chr16:51,086,014...51,089,165
Ensembl chr16:51,086,011...51,089,162 		JBrowse link
G TBX5 T-box transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,772,205...37,826,015
Ensembl chr14:37,774,171...37,825,401 		JBrowse link
cardiac cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISL1 ISL LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19620969) Ensembl
MGI		 PMID:19620969 GO_REF:0000107 NCBI chr16:30,962,994...30,974,201
Ensembl chr16:30,963,000...30,973,907 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,322,016...55,327,600
Ensembl chr 7:55,322,274...55,323,539 		JBrowse link
G POU5F1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr 7:23,564,654...23,570,691 JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:76,854,218...76,857,143
Ensembl chr 4:76,854,150...76,857,148 		JBrowse link
cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGB1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9004034) Ensembl
MGI		 PMID:9004034 GO_REF:0000107 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17350578) Ensembl
MGI		 PMID:17350578 GO_REF:0000107 NCBI chr 9:13,040,615...13,826,957
Ensembl chr 9:13,045,196...13,820,420 		JBrowse link
cardiac muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18467625) Ensembl
MGI		 PMID:18467625 GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21554246) Ensembl
MGI		 PMID:21554246 GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176 		JBrowse link
G WT1 WT1 transcription factor involved_in ISO (MGI:5285454|PMID:21654746) BHF-UCL PMID:21654746 MGI:5285454 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,803...28,455,997 		JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
regulation of cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:76,854,218...76,857,143
Ensembl chr 4:76,854,150...76,857,148 		JBrowse link
sinoatrial node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX18 T-box transcription factor 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17799
    cellular process 16838
      cellular developmental process 4523
        cell fate commitment 287
          cardiac cell fate commitment 13
            His-Purkinje system cell fate commitment 0
            cardiac cell fate determination + 4
            cardiac cell fate specification + 3
            cardiac fibroblast cell fate commitment + 0
            cardiac glial cell fate commitment + 0
            cardiac muscle cell fate commitment + 7
            cardiac neuron fate commitment 0
            cardiac vascular smooth muscle cell fate commitment + 0
            cardioblast cell fate commitment + 0
            dorsal vessel aortic cell fate commitment 0
            dorsal vessel heart proper cell fate commitment 0
            endocardial cell fate commitment + 1
Path 2
Term Annotations click to browse term
  biological_process 17799
    developmental process 6719
      anatomical structure development 6314
        multicellular organism development 5105
          system development 4453
            circulatory system development 1338
              heart development 724
                cardiocyte differentiation 203
                  cardiac cell fate commitment 13
                    His-Purkinje system cell fate commitment 0
                    cardiac cell fate determination + 4
                    cardiac cell fate specification + 3
                    cardiac fibroblast cell fate commitment + 0
                    cardiac glial cell fate commitment + 0
                    cardiac muscle cell fate commitment + 7
                    cardiac neuron fate commitment 0
                    cardiac vascular smooth muscle cell fate commitment + 0
                    cardioblast cell fate commitment + 0
                    dorsal vessel aortic cell fate commitment 0
                    dorsal vessel heart proper cell fate commitment 0
                    endocardial cell fate commitment + 1
paths to the root