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ONTOLOGY REPORT - ANNOTATIONS

Term:cardiac cell fate commitment
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Accession:GO:0060911 term browser browse the term
Definition:The commitment of cells to specific cardiac cell fates and their capacity to differentiate into cardiac cells. Cardiac cells are cells that comprise the organ which pumps blood through the circulatory system.
Synonyms:exact_synonym: cardiocyte cell fate commitment


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cardiac cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bvht braveheart long non-coding RNA acts_upstream_of_or_within_positive_effect IMP (PMID:23352431) MGI PMID:23352431 NCBI chr18:61,772,724...61,780,556
Ensembl chr18:61,747,529...61,780,560 		JBrowse link
atrioventricular node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:15109497) MGI PMID:15109497 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Tbx5 T-box 5 involved_in IMP (MGI:3051695|PMID:15289437) BHF-UCL PMID:15289437 MGI:3051695 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
cardiac cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:19620969) MGI PMID:19620969 GO_REF:0000119 MGI:4834177 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IDA (MGI:4441249|PMID:18593560) BHF-UCL PMID:18593560 MGI:4441249 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Pou5f1 POU domain, class 5, transcription factor 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr17:35,816,929...35,821,674
Ensembl chr17:35,816,915...35,821,669 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgb1 integrin beta 1 (fibronectin receptor beta) acts_upstream_of_or_within IMP (PMID:9004034) MGI PMID:9004034 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681 		JBrowse link
G Tenm4 teneurin transmembrane protein 4 acts_upstream_of_or_within IMP (PMID:17350578) MGI PMID:17350578 NCBI chr 7:95,550,262...96,560,300
Ensembl chr 7:95,820,453...96,560,300 		JBrowse link
cardiac muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G AW551984 expressed sequence AW551984 acts_upstream_of_or_within IGI (PMID:21554246) MGI PMID:21554246 NCBI chr 9:39,498,692...39,516,070
Ensembl chr 9:39,498,692...39,515,699 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:18467625) MGI PMID:18467625 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in
acts_upstream_of_or_within		 ISO
IGI		 (PMID:21554246) MGI PMID:21554246 GO_REF:0000119 MGI:4834177 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wt1 WT1 transcription factor involved_in IMP (MGI:5285454|PMID:21654746) BHF-UCL PMID:21654746 MGI:5285454 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
regulation of cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox17 SRY (sex determining region Y)-box 17 involved_in IMP (MGI:3703823|PMID:17360443) BHF-UCL PMID:17360443 MGI:3703823 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
sinoatrial node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box18 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:87,584,853...87,613,313
Ensembl chr 9:87,584,853...87,613,313 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    cellular process 17593
      cellular developmental process 5061
        cell fate commitment 312
          cardiac cell fate commitment 15
            His-Purkinje system cell fate commitment 0
            cardiac cell fate determination + 4
            cardiac cell fate specification + 3
            cardiac fibroblast cell fate commitment + 0
            cardiac glial cell fate commitment + 0
            cardiac muscle cell fate commitment + 8
            cardiac neuron fate commitment 0
            cardiac vascular smooth muscle cell fate commitment + 0
            cardioblast cell fate commitment + 0
            dorsal vessel aortic cell fate commitment 0
            dorsal vessel heart proper cell fate commitment 0
            endocardial cell fate commitment + 1
Path 2
Term Annotations click to browse term
  biological_process 28573
    developmental process 7363
      anatomical structure development 6834
        multicellular organism development 5426
          system development 4651
            circulatory system development 1420
              heart development 754
                cardiocyte differentiation 222
                  cardiac cell fate commitment 15
                    His-Purkinje system cell fate commitment 0
                    cardiac cell fate determination + 4
                    cardiac cell fate specification + 3
                    cardiac fibroblast cell fate commitment + 0
                    cardiac glial cell fate commitment + 0
                    cardiac muscle cell fate commitment + 8
                    cardiac neuron fate commitment 0
                    cardiac vascular smooth muscle cell fate commitment + 0
                    cardioblast cell fate commitment + 0
                    dorsal vessel aortic cell fate commitment 0
                    dorsal vessel heart proper cell fate commitment 0
                    endocardial cell fate commitment + 1
paths to the root