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ONTOLOGY REPORT - ANNOTATIONS

Term:neural plate pattern specification
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Accession:GO:0060896 term browser browse the term
Definition:The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate.
Synonyms:xref: Reactome:R-HSA-9834899 "Specification of the neural plate border"

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neural plate pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:16943278) MGI PMID:16943278 NCBI chrNW_004624841:218,642...304,744
Ensembl chrNW_004624841:219,133...265,397 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in ISO (PMID:15857913) UniProt PMID:15857913 NCBI chrNW_004624934:161,323...313,621
Ensembl chrNW_004624934:161,054...311,937 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in ISO (PMID:23806618) UniProt PMID:23806618 NCBI chrNW_004624832:4,509,118...4,514,180
Ensembl chrNW_004624832:4,509,505...4,514,183 		JBrowse link
G Ofd1 OFD1 centriole and centriolar satellite protein involved_in ISO (PMID:23806618) UniProt PMID:23806618 NCBI chrNW_004624882:376,447...417,066
Ensembl chrNW_004624882:376,556...416,509 		JBrowse link
neural plate anterior/posterior regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 involved_in ISO (PMID:12755329) BHF-UCL PMID:12755329 NCBI chrNW_004624772:4,990,185...5,014,008
Ensembl chrNW_004624772:4,990,178...5,014,119 		JBrowse link
G Nog noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in ISO (PMID:17584735) BHF-UCL PMID:17584735 NCBI chrNW_004624799:9,694,167...9,721,468
Ensembl chrNW_004624799:9,694,374...9,719,385 		JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chrNW_004624817:2,880,775...3,060,399
Ensembl chrNW_004624817:2,880,976...3,042,004 		JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004624753:16,929,503...16,995,255
Ensembl chrNW_004624753:16,935,251...16,995,389 		JBrowse link
neural plate mediolateral regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:16943278) MGI PMID:16943278 NCBI chrNW_004624841:218,642...304,744
Ensembl chrNW_004624841:219,133...265,397 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17640
    multicellular organismal process 7676
      pattern specification process 463
        neural plate pattern specification 9
          neural plate axis specification 2
          neural plate regionalization + 7
Path 2
Term Annotations click to browse term
  biological_process 17640
    developmental process 6390
      anatomical structure development 5982
        multicellular organism development 4819
          pattern specification process 463
            neural plate pattern specification 9
              neural plate axis specification 2
              neural plate regionalization + 7
paths to the root