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ONTOLOGY REPORT - ANNOTATIONS


Term:neural plate pattern specification
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Accession:GO:0060896 term browser browse the term
Definition:The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate.


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neural plate pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chr14:34,411,061...34,503,336
Ensembl chr14:34,410,734...34,503,341
JBrowse link
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:89,300,638...89,302,559
Ensembl chr11:89,300,638...89,302,332
JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single-stranded DNA binding protein 3 involved_in IMP (MGI:3578570|PMID:15857913) UniProt PMID:15857913 MGI:3578570 NCBI chr 4:106,911,470...107,049,694
Ensembl chr 4:106,910,701...107,049,694
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box18 involved_in IDA (MGI:3722519|PMID:17584735) BHF-UCL PMID:17584735 MGI:3722519 NCBI chr 9:87,702,800...87,731,260
Ensembl chr 9:87,702,800...87,731,260
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in IMP (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chr 7:44,894,305...44,900,624
Ensembl chr 7:44,896,079...44,902,631
JBrowse link
G Ofd1 OFD1, centriole and centriolar satellite protein involved_in IMP (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chr  X:166,386,573...166,440,704
Ensembl chr  X:166,390,033...166,440,704
JBrowse link
neural plate anterior/posterior regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr2 cadherin, EGF LAG seven-pass G-type receptor 2 involved_in IDA (MGI:3765258|PMID:12755329) BHF-UCL PMID:12755329 MGI:3765258 NCBI chr 3:108,390,848...108,416,069
Ensembl chr 3:108,390,851...108,415,552
JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr 7:100,372,229...100,470,159
Ensembl chr 7:100,372,233...100,470,152
JBrowse link
G Ptch1 patched 1 involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr13:63,508,328...63,573,460
Ensembl chr13:63,508,328...63,573,598
JBrowse link
neural plate mediolateral regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chr14:34,411,061...34,503,336
Ensembl chr14:34,410,734...34,503,341
JBrowse link
regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:89,300,638...89,302,559
Ensembl chr11:89,300,638...89,302,332
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23319
    multicellular organismal process 8931
      pattern specification process 482
        neural plate pattern specification 9
          neural plate axis specification 2
          neural plate regionalization + 7
Path 2
Term Annotations click to browse term
  biological_process 23319
    developmental process 7063
      anatomical structure development 6534
        multicellular organism development 5996
          pattern specification process 482
            neural plate pattern specification 9
              neural plate axis specification 2
              neural plate regionalization + 7
paths to the root