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ONTOLOGY REPORT - ANNOTATIONS

Term:neural plate pattern specification
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Accession:GO:0060896 term browser browse the term
Definition:The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate.
Synonyms:xref: Reactome:R-HSA-9834899 "Specification of the neural plate border"


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neural plate pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16943278) Ensembl
MGI		 PMID:16943278 GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SSBP3 single stranded DNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:54,690,632...54,826,691
Ensembl chr 5:54,662,840...54,824,960 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FUZ fuzzy planar cell polarity protein involved_in ISO (PMID:23806618) UniProt PMID:23806618 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein involved_in ISO (PMID:23806618) UniProt PMID:23806618 NCBI chr  X:10,140,439...10,194,478
Ensembl chr  X:10,140,067...10,194,472 		JBrowse link
neural plate anterior/posterior regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR2 cadherin EGF LAG seven-pass G-type receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,547,638...42,573,407
Ensembl chr 6:42,548,983...42,573,962 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G TBX18 T-box transcription factor 18 involved_in ISO (PMID:17584735) BHF-UCL PMID:17584735 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205 		JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:24,127,390...24,272,473
Ensembl chr21:24,127,598...24,272,657 		JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662 		JBrowse link
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639 		JBrowse link
neural plate mediolateral regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16943278) Ensembl
MGI		 PMID:16943278 GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22103
    multicellular organismal process 8174
      pattern specification process 496
        neural plate pattern specification 10
          neural plate axis specification 3
          neural plate regionalization + 7
Path 2
Term Annotations click to browse term
  biological_process 22103
    developmental process 6888
      anatomical structure development 6450
        multicellular organism development 5222
          pattern specification process 496
            neural plate pattern specification 10
              neural plate axis specification 3
              neural plate regionalization + 7
paths to the root