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ONTOLOGY REPORT - ANNOTATIONS

Term:neural plate pattern specification
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Accession:GO:0060896 term browser browse the term
Definition:The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate.
Synonyms:xref: Reactome:R-HSA-9834899 "Specification of the neural plate border"

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neural plate pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:16943278) MGI PMID:16943278 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in ISO (PMID:15857913) UniProt PMID:15857913 NCBI chrNW_004955464:4,901,150...5,049,341
Ensembl chrNW_004955464:4,901,151...5,047,656 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in ISO (PMID:23806618) UniProt PMID:23806618 NCBI chrNW_004955559:1,112,670...1,117,620
Ensembl chrNW_004955559:1,112,855...1,117,413 		JBrowse link
G Ofd1 OFD1 centriole and centriolar satellite protein involved_in ISO (PMID:23806618) UniProt PMID:23806618 NCBI chrNW_004955519:4,433,747...4,470,842
Ensembl chrNW_004955519:4,433,855...4,471,070 		JBrowse link
neural plate anterior/posterior regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 involved_in ISO (PMID:12755329) BHF-UCL PMID:12755329 NCBI chrNW_004955435:12,671,759...12,695,070
Ensembl chrNW_004955435:12,671,759...12,695,564 		JBrowse link
G Nog noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in ISO (PMID:17584735) BHF-UCL PMID:17584735 NCBI chrNW_004955411:12,194,560...12,232,374
Ensembl chrNW_004955411:12,194,550...12,232,374 		JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chrNW_004955414:17,444,299...17,557,912
Ensembl chrNW_004955414:17,444,515...17,558,245 		JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:11517919) BHF-UCL PMID:11517919 NCBI chrNW_004955422:22,362,330...22,418,062
Ensembl chrNW_004955422:22,362,221...22,427,622 		JBrowse link
neural plate mediolateral regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:16943278) MGI PMID:16943278 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12563
    multicellular organismal process 6264
      pattern specification process 445
        neural plate pattern specification 9
          neural plate axis specification 2
          neural plate regionalization + 7
Path 2
Term Annotations click to browse term
  biological_process 12563
    developmental process 5951
      anatomical structure development 5628
        multicellular organism development 4604
          pattern specification process 445
            neural plate pattern specification 9
              neural plate axis specification 2
              neural plate regionalization + 7
paths to the root