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ONTOLOGY REPORT - ANNOTATIONS


Term:semicircular canal development
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Accession:GO:0060872 term browser browse the term
Definition:The progression of the semicircular canal from its initial formation to the mature structure.


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semicircular canal development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:4818492 (MGI:4821520|PMID:20652952) RGD PMID:20652952 MGI:4821520 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
anterior semicircular canal development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
lateral semicircular canal development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:3709667|PMID:17395647) RGD PMID:17395647 MGI:3709667 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:3575490|PMID:15765517) RGD PMID:15765517 MGI:3575490 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
semicircular canal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:98493 (MGI:4397600|PMID:19855134) RGD PMID:19855134 MGI:4397600 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:1857803 (MGI:1335261|PMID:10072433) RGD PMID:10072433 MGI:1335261 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95517 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within ISO MGI:1099809 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:218,003,018...218,006,942
Ensembl chr 1:218,003,018...218,006,942
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:2157256|PMID:11784868) RGD PMID:11784868 MGI:2157256 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2444748 (MGI:4397600|PMID:19855134)
UniProt
RGD
PMID:19855134 GO_REF:0000024 MGI:4397600 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861230 (MGI:5294688|PMID:21980308)
Ensembl
RGD
PMID:21980308 GO_REF:0000107 MGI:5294688 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    multicellular organismal process 8821
      multicellular organism development 5629
        tube development 1221
          semicircular canal development 10
            anterior semicircular canal development 1
            lateral semicircular canal development 1
            posterior semicircular canal development 0
            semicircular canal morphogenesis + 8
Path 2
Term Annotations click to browse term
  biological_process 19491
    developmental process 6766
      anatomical structure development 6192
        multicellular organism development 5629
          system development 5301
            animal organ development 4060
              sensory organ development 702
                ear development 271
                  inner ear development 244
                    semicircular canal development 10
                      anterior semicircular canal development 1
                      lateral semicircular canal development 1
                      posterior semicircular canal development 0
                      semicircular canal morphogenesis + 8
paths to the root