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ONTOLOGY REPORT - ANNOTATIONS


Term:spongiotrophoblast layer development
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Accession:GO:0060712 term browser browse the term
Definition:The process in which the spongiotrophoblast layer of the placenta progresses from its formation to its mature state.



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spongiotrophoblast layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin acts_upstream_of_or_within ISO MGI:2176598 (MGI:3689296|PMID:16981008) RGD PMID:16981008 MGI:3689296 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:12917334) RGD PMID:12917334 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Birc6 baculoviral IAP repeat-containing 6 acts_upstream_of_or_within ISO MGI:3512417 (MGI:3511408|PMID:15485903) RGD PMID:15485903 MGI:3511408 NCBI chr 6:20,722,922...20,916,396
Ensembl chr 6:20,722,922...20,916,434
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 acts_upstream_of_or_within ISO MGI:3028946 (MGI:3027297|PMID:14673158) RGD PMID:14673158 MGI:3027297 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162
JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 acts_upstream_of_or_within ISO MGI:3665136 (MGI:3653956|PMID:16880526) RGD PMID:16880526 MGI:3653956 NCBI chr12:38,426,443...38,518,712
Ensembl chr12:38,426,444...38,516,424
JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO MGI:3832730 (MGI:3831588|PMID:19090619) RGD PMID:19090619 MGI:3831588 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238
JBrowse link
G Zfat zinc finger and AT hook domain containing acts_upstream_of_or_within ISO MGI:4829941 (MGI:4822499|PMID:20660741) RGD PMID:20660741 MGI:4822499 NCBI chr 7:99,886,954...100,054,288
Ensembl chr 7:99,886,954...100,054,274
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO MGI:3050540 (MGI:3047495|PMID:15226444) RGD PMID:15226444 MGI:3047495 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO MGI:2675202 (MGI:2673047|PMID:12783884) RGD PMID:12783884 MGI:2673047 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
regulation of spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrk Nik related kinase acts_upstream_of_or_within ISO MGI:5292103 (MGI:5287920|PMID:21715335) RGD PMID:21715335 MGI:5287920 NCBI chr  X:102,365,747...102,462,957
Ensembl chr  X:102,365,765...102,459,657
JBrowse link
G Phlda2 pleckstrin homology-like domain, family A, member 2 acts_upstream_of_or_within ISO MGI:2181542 (MGI:5749303|PMID:26476147) RGD PMID:26476147 MGI:5749303 NCBI chr 1:198,696,897...198,699,292
Ensembl chr 1:198,696,897...198,697,836
JBrowse link
spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2 insulin-like growth factor 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5424276|PMID:22562201)
Ensembl
RGD
PMID:22562201 GO_REF:0000107 MGI:5424276 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2153832 (MGI:1097723|PMID:9331331) RGD PMID:9331331 MGI:1097723 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO MGI:3769388 (MGI:3768289|PMID:17961533) RGD PMID:17961533 MGI:3768289 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552 (MGI:5604339|PMID:24855001) RGD PMID:24855001 MGI:5604339 NCBI chr 6:69,181,429...69,267,803
Ensembl chr 6:69,181,436...69,268,053
JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1201791 (MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107 MGI:3609466 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
JBrowse link
G Socs3 suppressor of cytokine signaling 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180861|MGI:96787 (MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107 MGI:3609466 NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
JBrowse link
spongiotrophoblast layer developmental growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plac1 placenta enriched 1 acts_upstream_of_or_within ISO MGI:3808477 (MGI:5432627|PMID:22729990) RGD PMID:22729990 MGI:5432627 NCBI chr  X:132,821,347...132,955,143
Ensembl chr  X:132,821,347...132,985,668
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    reproductive process 1827
      developmental process involved in reproduction 1215
        embryonic placenta development 111
          spongiotrophoblast layer development 17
            glycogen cell differentiation involved in embryonic placenta development 1
            spongiotrophoblast differentiation 5
            spongiotrophoblast layer developmental growth + 4
Path 2
Term Annotations click to browse term
  biological_process 19497
    developmental process 6889
      anatomical structure development 6306
        multicellular organism development 5727
          system development 5373
            reproductive system development 596
              reproductive structure development 591
                placenta development 195
                  embryonic placenta development 111
                    spongiotrophoblast layer development 17
                      glycogen cell differentiation involved in embryonic placenta development 1
                      spongiotrophoblast differentiation 5
                      spongiotrophoblast layer developmental growth + 4
paths to the root