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ONTOLOGY REPORT - ANNOTATIONS

Term:labyrinthine layer development
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Accession:GO:0060711 term browser browse the term
Definition:The process in which the labyrinthine layer of the placenta progresses, from its formation to its mature state.


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labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIRC6 baculoviral IAP repeat containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15485903) Ensembl
MGI		 PMID:15485903 GO_REF:0000107 NCBI chr 2:32,357,023...32,618,878
Ensembl chr 2:32,357,023...32,619,571 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19853565) Ensembl
MGI		 PMID:19853565 GO_REF:0000107 NCBI chr13:27,960,918...27,969,315
Ensembl chr13:27,960,918...27,969,315 		JBrowse link
G CDX4 caudal type homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19853565) Ensembl
MGI		 PMID:19853565 GO_REF:0000107 NCBI chr  X:73,447,053...73,455,171
Ensembl chr  X:73,447,053...73,455,171 		JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14673158) Ensembl
MGI		 PMID:14673158 GO_REF:0000107 NCBI chr  X:72,301,646...72,307,157
Ensembl chr  X:72,301,638...72,307,187 		JBrowse link
G EGLN1 egl-9 family hypoxia inducible factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16966370) Ensembl
MGI		 PMID:16966370 GO_REF:0000107 NCBI chr 1:231,363,756...231,422,287
Ensembl chr 1:231,363,751...231,422,287 		JBrowse link
G GAB1 GRB2 associated binding protein 1 acts_upstream_of_or_within ISO (PMID:10779359) MGI PMID:10779359 NCBI chr 4:143,336,876...143,474,565
Ensembl chr 4:143,336,876...143,474,565 		JBrowse link
G GGNBP2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26764350) Ensembl
MGI		 PMID:26764350 GO_REF:0000107 NCBI chr17:36,544,919...36,589,848
Ensembl chr17:36,544,912...36,589,848 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10209122) Ensembl
MGI		 PMID:10209122 GO_REF:0000107 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,837...66,491,656 		JBrowse link
G MIR127 microRNA 127 acts_upstream_of_or_within ISO (PMID:26138477) MGI PMID:26138477 NCBI chr14:100,882,979...100,883,075
Ensembl chr14:100,882,979...100,883,075 		JBrowse link
G PCDH12 protocadherin 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18477666) Ensembl
MGI		 PMID:18477666 GO_REF:0000107 NCBI chr 5:141,943,581...141,958,202
Ensembl chr 5:141,943,581...141,969,741 		JBrowse link
G RTL1 retrotransposon Gag like 1 acts_upstream_of_or_within ISO (PMID:28111885)
(PMID:26138477)		 MGI PMID:26138477 PMID:28111885 NCBI chr14:100,879,753...100,903,722
Ensembl chr14:100,879,753...100,903,722 		JBrowse link
G SENP2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO (PMID:19090619) MGI PMID:19090619 NCBI chr 3:185,586,295...185,633,551
Ensembl chr 3:185,582,496...185,633,551 		JBrowse link
G SYDE1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO (PMID:27917469) MGI PMID:27917469 NCBI chr19:15,107,401...15,114,974
Ensembl chr19:15,107,401...15,114,985 		JBrowse link
G VASH2 vasohibin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25184477) Ensembl
MGI		 PMID:25184477 GO_REF:0000107 NCBI chr 1:212,950,541...212,991,585
Ensembl chr 1:212,950,520...212,992,037 		JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16981008) Ensembl
MGI		 PMID:16981008 GO_REF:0000107 NCBI chr11:10,305,073...10,307,397
Ensembl chr11:10,305,073...10,307,397 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:9435295) UniProt
MGI		 PMID:9435295 GO_REF:0000024 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610556) Ensembl
MGI		 PMID:23610556 GO_REF:0000107 NCBI chr 2:207,762,598...207,769,906
Ensembl chr 2:207,762,598...207,769,906 		JBrowse link
G GCM1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10888880) Ensembl
MGI		 PMID:10888880 GO_REF:0000107 NCBI chr 6:53,126,961...53,148,841
Ensembl chr 6:53,126,961...53,148,841 		JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11369229) Ensembl
MGI		 PMID:11369229 GO_REF:0000107 NCBI chr17:75,318,076...75,405,678
Ensembl chr17:75,318,076...75,405,709 		JBrowse link
G IL10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12842419) Ensembl
MGI		 PMID:12842419 GO_REF:0000107 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541 		JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO (PMID:21606200) MGI PMID:21606200 NCBI chr17:75,525,002...75,575,209
Ensembl chr17:75,525,080...75,575,209 		JBrowse link
G RSPO3 R-spondin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16963017) Ensembl
MGI		 PMID:16963017 GO_REF:0000107 NCBI chr 6:127,118,671...127,199,481
Ensembl chr 6:127,118,671...127,199,481 		JBrowse link
G SOCS3 suppressor of cytokine signaling 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11481489) Ensembl
MGI		 PMID:11481489 GO_REF:0000107 NCBI chr17:78,356,778...78,360,925
Ensembl chr17:78,356,778...78,360,077 		JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17174946) Ensembl
MGI		 PMID:17174946 GO_REF:0000107 NCBI chr15:40,844,048...40,858,207
Ensembl chr15:40,844,018...40,858,207 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30236446) Ensembl
MGI		 PMID:30236446 GO_REF:0000107 NCBI chr12:123,584,552...123,598,582
Ensembl chr12:123,584,533...123,598,582 		JBrowse link
chorio-allantoic fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP5 bone morphogenetic protein 5 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:55,753,653...55,875,590
Ensembl chr 6:55,753,653...55,875,590 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12446788) Ensembl
MGI		 PMID:12446788 GO_REF:0000107 NCBI chr 1:85,580,761...85,583,950
Ensembl chr 1:85,580,761...85,584,589 		JBrowse link
G DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10021343) Ensembl
MGI		 PMID:10021343 GO_REF:0000107 NCBI chr 7:157,337,004...157,417,439
Ensembl chr 7:157,335,381...157,417,439 		JBrowse link
G ERF ETS2 repressor factor acts_upstream_of_or_within ISO (PMID:17502352) MGI PMID:17502352 NCBI chr19:42,247,569...42,255,128
Ensembl chr19:42,247,569...42,255,128 		JBrowse link
G ITGA4 integrin subunit alpha 4 acts_upstream_of_or_within ISO (PMID:7539359) MGI PMID:7539359 NCBI chr 2:181,457,205...181,538,940
Ensembl chr 2:181,457,202...181,538,940 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10090727) Ensembl
MGI		 PMID:10090727 GO_REF:0000107 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956 		JBrowse link
G VCAM1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:7539357)
(PMID:7530222)		 MGI PMID:7530222 PMID:7539357 NCBI chr 1:100,719,742...100,739,045
Ensembl chr 1:100,719,742...100,739,045 		JBrowse link
G WNT7B Wnt family member 7B involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:11543617) UniProt
MGI		 PMID:11543617 GO_REF:0000024 NCBI chr22:45,920,366...45,977,162
Ensembl chr22:45,920,366...45,977,162 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15226444) Ensembl
MGI		 PMID:15226444 GO_REF:0000107 NCBI chr14:68,787,655...68,796,243
Ensembl chr14:68,787,660...68,796,253 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25758223) Ensembl
MGI		 PMID:25758223 GO_REF:0000107 NCBI chr 8:101,492,439...101,681,200
Ensembl chr 8:101,492,439...101,669,726 		JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr19:38,264,573...38,292,615
Ensembl chr19:38,244,035...38,292,615 		JBrowse link
G ST14 ST14 transmembrane serine protease matriptase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr11:130,159,782...130,210,362
Ensembl chr11:130,159,782...130,210,362 		JBrowse link
labyrinthine layer blood vessel development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12783884) Ensembl
MGI		 PMID:12783884 GO_REF:0000107 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12446788) Ensembl
MGI		 PMID:12446788 GO_REF:0000107 NCBI chr 1:85,580,761...85,583,950
Ensembl chr 1:85,580,761...85,584,589 		JBrowse link
G ERVFRD-1 endogenous retrovirus group FRD member 1, envelope acts_upstream_of_or_within ISO (PMID:22032925) MGI PMID:22032925 NCBI chr 6:11,102,489...11,111,725
Ensembl chr 6:11,102,489...11,111,725 		JBrowse link
G ESX1 ESX homeobox 1 acts_upstream_of_or_within ISO (PMID:9806555) MGI PMID:9806555 NCBI chr  X:104,250,038...104,254,933
Ensembl chr  X:104,250,038...104,254,933 		JBrowse link
G FBXW8 F-box and WD repeat domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16880526) Ensembl
MGI		 PMID:16880526 GO_REF:0000107 NCBI chr12:116,910,950...117,031,148
Ensembl chr12:116,910,950...117,031,148 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11092808) Ensembl
MGI		 PMID:11092808 GO_REF:0000107 NCBI chr 2:207,762,598...207,769,906
Ensembl chr 2:207,762,598...207,769,906 		JBrowse link
G GGNBP2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26764350) Ensembl
MGI		 PMID:26764350 GO_REF:0000107 NCBI chr17:36,544,919...36,589,848
Ensembl chr17:36,544,912...36,589,848 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732 		JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,762,371...79,767,857 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269 		JBrowse link
G HS6ST1 heparan sulfate 6-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17405882) Ensembl
MGI		 PMID:17405882 GO_REF:0000107 NCBI chr 2:128,265,480...128,318,868
Ensembl chr 2:128,236,716...128,318,868 		JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10022836) Ensembl
MGI		 PMID:10022836 GO_REF:0000107 NCBI chr19:12,791,486...12,793,315
Ensembl chr19:12,791,486...12,793,315 		JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO (PMID:21606200) MGI PMID:21606200 NCBI chr17:75,525,002...75,575,209
Ensembl chr17:75,525,080...75,575,209 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14622137) Ensembl
MGI		 PMID:14622137 GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486)
(PMID:12368298)		 MGI PMID:12368298 PMID:12556486 NCBI chr20:34,714,774...34,825,651
Ensembl chr20:34,689,097...34,825,651 		JBrowse link
G NFE2 nuclear factor, erythroid 2 acts_upstream_of_or_within ISO (PMID:21558372) MGI PMID:21558372 NCBI chr12:54,292,111...54,301,015
Ensembl chr12:54,292,111...54,301,015 		JBrowse link
G NSDHL NAD(P) dependent steroid dehydrogenase-like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17028112) Ensembl
MGI		 PMID:17028112 GO_REF:0000107 NCBI chr  X:152,831,063...152,869,729
Ensembl chr  X:152,830,967...152,869,729 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17573777) Ensembl
MGI		 PMID:17573777 GO_REF:0000107 NCBI chr20:18,024,152...18,059,188
Ensembl chr20:17,956,979...18,059,188 		JBrowse link
G PLCD1 phospholipase C delta 1 acts_upstream_of_or_within ISO (PMID:16314520) MGI PMID:16314520 NCBI chr 3:38,007,496...38,029,642
Ensembl chr 3:38,007,496...38,029,642 		JBrowse link
G PLCD3 phospholipase C delta 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16314520) Ensembl
MGI		 PMID:16314520 GO_REF:0000107 NCBI chr17:45,108,959...45,132,515
Ensembl chr17:45,108,959...45,133,354 		JBrowse link
G PLG plasminogen involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12900459) Ensembl
MGI		 PMID:12900459 GO_REF:0000107 NCBI chr 6:160,702,193...160,754,097
Ensembl chr 6:160,702,194...160,754,097 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131 		JBrowse link
G SYDE1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO (PMID:27917469) MGI PMID:27917469 NCBI chr19:15,107,401...15,114,974
Ensembl chr19:15,107,401...15,114,985 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:123,584,552...123,598,582
Ensembl chr12:123,584,533...123,598,582 		JBrowse link
G VASH1 vasohibin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25184477) Ensembl
MGI		 PMID:25184477 GO_REF:0000107 NCBI chr14:76,761,468...76,783,015
Ensembl chr14:76,761,468...76,783,015 		JBrowse link
G VASH2 vasohibin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25184477) Ensembl
MGI		 PMID:25184477 GO_REF:0000107 NCBI chr 1:212,950,541...212,991,585
Ensembl chr 1:212,950,520...212,992,037 		JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8951051) Ensembl
MGI		 PMID:8951051 GO_REF:0000107 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152 		JBrowse link
labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESX1 ESX homeobox 1 acts_upstream_of_or_within ISO (PMID:9806555) MGI PMID:9806555 NCBI chr  X:104,250,038...104,254,933
Ensembl chr  X:104,250,038...104,254,933 		JBrowse link
G GJB5 gap junction protein beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17961533) Ensembl
MGI		 PMID:17961533 GO_REF:0000107 NCBI chr 1:34,755,047...34,758,512
Ensembl chr 1:34,755,047...34,758,512 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20685850) Ensembl
MGI		 PMID:20685850 GO_REF:0000107 NCBI chr 2:24,491,254...24,770,702
Ensembl chr 2:24,491,254...24,770,702 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (PMID:20685850) MGI PMID:20685850 NCBI chr20:47,501,887...47,656,872
Ensembl chr20:47,501,887...47,656,877 		JBrowse link
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP8 caspase 8 involved_in TAS (PMID:18309324) UniProt PMID:18309324 NCBI chr 2:201,233,463...201,287,711
Ensembl chr 2:201,233,443...201,361,836 		JBrowse link
G DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21972064) Ensembl
MGI		 PMID:21972064 GO_REF:0000107 NCBI chr 7:157,337,004...157,417,439
Ensembl chr 7:157,335,381...157,417,439 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610556) Ensembl
MGI		 PMID:23610556 GO_REF:0000107 NCBI chr 2:207,762,598...207,769,906
Ensembl chr 2:207,762,598...207,769,906 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    developmental process 7610
      anatomical structure development 7020
        labyrinthine layer development 62
          epithelial cell differentiation involved in embryonic placenta development + 3
          labyrinthine layer blood vessel development 27
          labyrinthine layer morphogenesis + 28
          syncytiotrophoblast cell differentiation involved in labyrinthine layer development 3
Path 2
Term Annotations click to browse term
  biological_process 19669
    developmental process 7610
      anatomical structure development 7020
        multicellular organism development 5632
          embryo development 1396
            embryo development ending in birth or egg hatching 902
              chordate embryonic development 879
                in utero embryonic development 570
                  embryonic placenta development 115
                    labyrinthine layer development 62
                      epithelial cell differentiation involved in embryonic placenta development + 3
                      labyrinthine layer blood vessel development 27
                      labyrinthine layer morphogenesis + 28
                      syncytiotrophoblast cell differentiation involved in labyrinthine layer development 3
paths to the root