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ONTOLOGY REPORT - ANNOTATIONS

Term:cell differentiation involved in embryonic placenta development
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Accession:GO:0060706 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of the embryonic placenta.


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cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in ISO
IEA 		(PMID:10716450)
GO_REF:0000107 		RGD
Ensembl		 PMID:10716450 GO_REF:0000107 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Gcm1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:2183479 (PMID:10888880) 		GO_Central
Ensembl
RGD		 PMID:10888880 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924 		JBrowse link
G Krt19 keratin 19 acts_upstream_of_or_within ISO
IEA 		MGI:96705 (PMID:11062258)
GO_REF:0000107 		RGD
Ensembl		 PMID:11062258 GO_REF:0000107 NCBI chr10:85,075,835...85,080,552
Ensembl chr10:85,066,802...85,171,799 		JBrowse link
G Krt8 keratin 8 acts_upstream_of_or_within ISO MGI:96693 (PMID:11062258) RGD PMID:11062258 NCBI chr 7:133,124,203...133,131,656
Ensembl chr 7:133,124,203...133,131,728 		JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within ISO MGI:1929004 (PMID:19786569) RGD PMID:19786569 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO
IEA 		MGI:1928487 (PMID:19786569)
GO_REF:0000107 		RGD
Ensembl		 PMID:19786569 GO_REF:0000107 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO
IEA 		MGI:4340678 (PMID:25758223)
GO_REF:0000107 		RGD
Ensembl		 PMID:25758223 GO_REF:0000107 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:1338881|MGI:2156187 (PMID:19592578) RGD PMID:19592578 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO
IEA 		MGI:1338031 (PMID:19592578)
GO_REF:0000107 		RGD
Ensembl		 PMID:19592578 GO_REF:0000107 NCBI chr 8:29,540,805...29,581,704
Ensembl chr 8:29,540,811...29,581,517 		JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO
IEA 		MGI:2675202 (PMID:12783884)
GO_REF:0000107 		RGD
Ensembl		 PMID:12783884 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
negative regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO
IEA 		(PMID:24859262)
GO_REF:0000107 		RGD
Ensembl		 PMID:24859262 GO_REF:0000107 NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973 		JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO
IEA 		(PMID:9676199)
GO_REF:0000107 		RGD
Ensembl		 PMID:9676199 GO_REF:0000107 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 involved_in ISO
IEA 		(PMID:19219068)
GO_REF:0000107 		RGD
Ensembl		 PMID:19219068 GO_REF:0000107 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924 		JBrowse link
G Stk3 serine/threonine kinase 3 acts_upstream_of_or_within ISO MGI:1929004 (PMID:24595170) RGD PMID:24595170 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233 		JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO
IEA 		MGI:1928487 (PMID:24595170)
GO_REF:0000107 		RGD
Ensembl		 PMID:24595170 GO_REF:0000107 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744 		JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO
IEA 		MGI:2153832 (PMID:9331331)
GO_REF:0000107 		RGD
Ensembl		 PMID:9331331 GO_REF:0000107 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO MGI:3769388 (PMID:17961533) RGD PMID:17961533 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:74,916,803...75,003,408
Ensembl chr 6:69,181,436...69,268,053 		JBrowse link
G Lif LIF, interleukin 6 family cytokine acts_upstream_of_or_within ISO MGI:1201791 (PMID:16258063) RGD PMID:16258063 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Xist X inactive specific transcript acts_upstream_of_or_within ISO MGI:2445460 (PMID:22573614) RGD PMID:22573614 NCBI chr  X:68,474,987...68,492,500 JBrowse link
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (PMID:21972064) RGD PMID:21972064 NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within ISO MGI:3583769 (PMID:23610556) RGD PMID:23610556 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
trophoblast giant cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cts7 cathepsin 7 acts_upstream_of_or_within ISO
IEA 		(PMID:18776147)
GO_REF:0000107 		RGD
Ensembl		 PMID:18776147 GO_REF:0000107 NCBI chr17:3,388,299...3,424,664
Ensembl chr17:3,388,299...3,393,439 		JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23064266)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734 		JBrowse link
G E2f8 E2F transcription factor 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23064266)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098 		JBrowse link
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of ISO
IEA 		(PMID:24859262)
GO_REF:0000107 		RGD
Ensembl		 PMID:24859262 GO_REF:0000107 NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973 		JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within ISO MGI:3719472 (PMID:17502352) RGD PMID:17502352 NCBI chr 1:80,829,935...80,838,388
Ensembl chr 1:80,829,935...80,838,388 		JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO (PMID:24866916) RGD PMID:24866916 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:10611232), (PMID:16759287), (PMID:17891141)
(PMID:23911935) 		UniProt
Ensembl
RGD		 PMID:10611232 PMID:16759287 PMID:17891141 PMID:23911935 GO_REF:0000024 GO_REF:0000107 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:74,916,803...75,003,408
Ensembl chr 6:69,181,436...69,268,053 		JBrowse link
G Lif LIF, interleukin 6 family cytokine acts_upstream_of_or_within ISO MGI:1201791 (PMID:16258063) RGD PMID:16258063 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Mdfi MyoD family inhibitor acts_upstream_of_or_within ISO
IEA 		MGI:2155446 (PMID:9799236)
GO_REF:0000107 		RGD
Ensembl		 PMID:9799236 GO_REF:0000107 NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO
IEA 		MGI:2385933 (PMID:17404209)
GO_REF:0000107 		RGD
Ensembl		 PMID:17404209 GO_REF:0000107 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031 		JBrowse link
G Palld palladin, cytoskeletal associated protein IEP RGD PMID:16481593 RGD:2325785 NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337 		JBrowse link
G Plg plasminogen acts_upstream_of_or_within ISO MGI:1857291 (PMID:12900459) RGD PMID:12900459 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786 		JBrowse link
G Plk4 polo-like kinase 4 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17891141)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17891141 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:123,802,527...123,820,942
Ensembl chr 2:123,802,512...123,820,942 		JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO
IEA 		MGI:5439582 (PMID:22987638)
GO_REF:0000107 		RGD
Ensembl		 PMID:22987638 GO_REF:0000107 NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO
IEA 		MGI:3832730 (PMID:19090619)
GO_REF:0000107 		RGD
Ensembl		 PMID:19090619 GO_REF:0000107 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO
IEA 		(PMID:9676199)
GO_REF:0000107 		RGD
Ensembl		 PMID:9676199 GO_REF:0000107 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Sox15 SRY-box transcription factor 15 involved_in ISO
IEA 		(PMID:16759287)
GO_REF:0000107 		RGD
Ensembl		 PMID:16759287 GO_REF:0000107 NCBI chr10:54,373,045...54,374,749
Ensembl chr10:54,372,403...54,376,591 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      developmental process involved in reproduction 1279
        cell differentiation involved in embryonic placenta development 32
          epithelial cell differentiation involved in embryonic placenta development + 3
          glycogen cell differentiation involved in embryonic placenta development 1
          negative regulation of cell differentiation involved in embryonic placenta development 2
          regulation of cell differentiation involved in embryonic placenta development + 5
          spongiotrophoblast differentiation 5
          syncytiotrophoblast cell differentiation involved in labyrinthine layer development 2
          trophoblast giant cell differentiation 18
Path 2
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          embryo development 1381
            embryo development ending in birth or egg hatching 909
              chordate embryonic development 892
                in utero embryonic development 582
                  embryonic placenta development 118
                    cell differentiation involved in embryonic placenta development 32
                      epithelial cell differentiation involved in embryonic placenta development + 3
                      glycogen cell differentiation involved in embryonic placenta development 1
                      negative regulation of cell differentiation involved in embryonic placenta development 2
                      regulation of cell differentiation involved in embryonic placenta development + 5
                      spongiotrophoblast differentiation 5
                      syncytiotrophoblast cell differentiation involved in labyrinthine layer development 2
                      trophoblast giant cell differentiation 18
paths to the root