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ONTOLOGY REPORT - ANNOTATIONS


Term:cell differentiation involved in embryonic placenta development
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Accession:GO:0060706 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of the embryonic placenta.


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cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin ISO (MGI:MGI:1354065|PMID:10716450) RGD PMID:10716450 MGI:MGI:1354065 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Gcm1 glial cells missing transcription factor 1 ISO
IBA
MGI:MGI:2183479 (MGI:MGI:1860502|PMID:10888880)
PMID:21873635
RGD PMID:10888880, PMID:21873635 MGI:MGI:1860502, RGD:13792537 NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002
JBrowse link
G Krt19 keratin 19 ISO MGI:MGI:96705 (MGI:MGI:1926669|PMID:11062258) RGD PMID:11062258 MGI:MGI:1926669 NCBI chr10:88,055,843...88,060,560
Ensembl chr10:88,055,841...88,060,561
JBrowse link
G Krt8 keratin 8 ISO MGI:MGI:96693 (MGI:MGI:1926669|PMID:11062258) RGD PMID:11062258 MGI:MGI:1926669 NCBI chr 7:143,596,511...143,603,745
Ensembl chr 7:143,596,511...143,603,803
JBrowse link
G Stk3 serine/threonine kinase 3 ISO
IEA
MGI:MGI:1929004 (MGI:MGI:4412133|PMID:19786569)
GO_REF:0000107
RGD
Ensembl
PMID:19786569 GO_REF:0000107, MGI:MGI:4412133 NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812
JBrowse link
G Stk4 serine/threonine kinase 4 ISO MGI:MGI:1928487 (MGI:MGI:4412133|PMID:19786569) RGD PMID:19786569 MGI:MGI:4412133 NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:MGI:4340678 (MGI:MGI:5634845|PMID:25758223) RGD PMID:25758223 MGI:MGI:5634845 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 ISO MGI:MGI:1338881|MGI:MGI:2156187 (MGI:MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:MGI:4360135 NCBI chr 1:87,199,373...87,221,826
Ensembl chr 1:87,199,313...87,221,892
JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO MGI:MGI:1338031 (MGI:MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:MGI:4360135 NCBI chr 8:32,240,113...32,280,813
Ensembl chr 8:32,240,133...32,280,869
JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO MGI:MGI:2675202 (MGI:MGI:2673047|PMID:12783884) RGD PMID:12783884 MGI:MGI:2673047 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
negative regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai1 snail family transcriptional repressor 1 ISO (MGI:MGI:1270969|PMID:9676199) RGD PMID:9676199 MGI:MGI:1270969 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 ISO (PMID:19219068) RGD PMID:19219068 NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002
JBrowse link
G Stk3 serine/threonine kinase 3 ISO
IEA
MGI:MGI:1929004 (MGI:MGI:5603236|PMID:24595170)
GO_REF:0000107
RGD
Ensembl
PMID:24595170 GO_REF:0000107, MGI:MGI:5603236 NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812
JBrowse link
G Stk4 serine/threonine kinase 4 ISO MGI:MGI:1928487 (MGI:MGI:5603236|PMID:24595170) RGD PMID:24595170 MGI:MGI:5603236 NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 ISO MGI:MGI:2153832 (MGI:MGI:1097723|PMID:9331331) RGD PMID:9331331 MGI:MGI:1097723 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Gjb5 gap junction protein, beta 5 ISO MGI:MGI:3769388 (MGI:MGI:3768289|PMID:17961533) RGD PMID:17961533 MGI:MGI:3768289 NCBI chr 5:145,422,034...145,440,558
Ensembl chr 5:145,422,357...145,423,172
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 ISO MGI:MGI:2137552 (MGI:MGI:5604339|PMID:24855001) RGD PMID:24855001 MGI:MGI:5604339 NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446
JBrowse link
G Lif LIF, interleukin 6 family cytokine ISO
IEA
MGI:MGI:1201791 (MGI:MGI:3609466|PMID:16258063)
GO_REF:0000107
RGD
Ensembl
PMID:16258063 GO_REF:0000107, MGI:MGI:3609466 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEA
ISO
GO_REF:0000107
MGI:MGI:2180861|MGI:MGI:96787 (MGI:MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107, MGI:MGI:3609466 NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040
JBrowse link
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ISO MGI:MGI:2151092 (MGI:MGI:5294250|PMID:21972064) RGD PMID:21972064 MGI:MGI:5294250 NCBI chr 4:2,711,329...2,774,969
Ensembl chr 4:2,711,385...2,774,890
JBrowse link
G Fzd5 frizzled class receptor 5 ISO
IEA
MGI:MGI:3583769 (MGI:MGI:5494335|PMID:23610556)
GO_REF:0000107
RGD
Ensembl
PMID:23610556 GO_REF:0000107, MGI:MGI:5494335 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
trophoblast giant cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cts7 cathepsin 7 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:3,280,311...3,285,451
Ensembl chr17:3,280,311...3,285,451
JBrowse link
G Cts8 cathepsin 8 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:3,385,851...3,397,621
Ensembl chr17:3,385,851...3,397,621
JBrowse link
G E2f7 E2F transcription factor 7 ISO
ISS
(MGI:MGI:5449497|PMID:23064266)
GO_REF:0000024
RGD
UniProt
PMID:23064266 GO_REF:0000024, MGI:MGI:5449497 NCBI chr 7:53,275,659...53,318,261
Ensembl chr 7:53,275,676...53,316,481
JBrowse link
G E2f8 E2F transcription factor 8 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5449497|PMID:23064266)
Ensembl
UniProt
RGD
PMID:23064266 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5449497 NCBI chr 1:104,185,436...104,203,683
Ensembl chr 1:104,187,100...104,202,591
JBrowse link
G Erf Ets2 repressor factor ISO MGI:MGI:3719472 (MGI:MGI:3718929|PMID:17502352) RGD PMID:17502352 MGI:MGI:3718929 NCBI chr 1:82,112,449...82,120,902
Ensembl chr 1:82,112,449...82,120,902
JBrowse link
G Gjb5 gap junction protein, beta 5 ISO (MGI:MGI:5605134|PMID:24866916) RGD PMID:24866916 MGI:MGI:5605134 NCBI chr 5:145,422,034...145,440,558
Ensembl chr 5:145,422,357...145,423,172
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:3625684|PMID:16759287), (MGI:MGI:4359361|PMID:17891141), (MGI:MGI:5518521|PMID:23911935)
UniProt
RGD
PMID:16759287, PMID:17891141, PMID:23911935 GO_REF:0000024, MGI:MGI:3625684, MGI:MGI:4359361, MGI:MGI:5518521 NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 ISO MGI:MGI:2137552 (MGI:MGI:5604339|PMID:24855001) RGD PMID:24855001 MGI:MGI:5604339 NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446
JBrowse link
G Lif LIF, interleukin 6 family cytokine ISO
IEA
MGI:MGI:1201791 (MGI:MGI:3609466|PMID:16258063)
GO_REF:0000107
RGD
Ensembl
PMID:16258063 GO_REF:0000107, MGI:MGI:3609466 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Mdfi MyoD family inhibitor ISO MGI:MGI:2155446 (MGI:MGI:1312999|PMID:9799236) RGD PMID:9799236 MGI:MGI:1312999 NCBI chr 9:15,166,118...15,184,469
Ensembl chr 9:15,166,118...15,184,468
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 ISO MGI:MGI:2385933 (MGI:MGI:3708079|PMID:17404209) RGD PMID:17404209 MGI:MGI:3708079 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
JBrowse link
G Palld palladin, cytoskeletal associated protein IEP RGD PMID:16481593 RGD:2325785 NCBI chr16:31,865,712...31,948,168 JBrowse link
G Plg plasminogen ISO MGI:MGI:1857291 (MGI:MGI:2668370|PMID:12900459) RGD PMID:12900459 MGI:MGI:2668370 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
G Plk4 polo-like kinase 4 ISO
ISS
(MGI:MGI:4359361|PMID:17891141)
GO_REF:0000024
RGD
UniProt
PMID:17891141 GO_REF:0000024, MGI:MGI:4359361 NCBI chr 2:127,686,911...127,705,518
Ensembl chr 2:127,686,925...127,705,518
JBrowse link
G Prdm1 PR/SET domain 1 ISO MGI:MGI:5439582 (MGI:MGI:5438144|PMID:22987638) RGD PMID:22987638 MGI:MGI:5438144 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Senp2 SUMO specific peptidase 2 ISO MGI:MGI:3832730 (MGI:MGI:3831588|PMID:19090619) RGD PMID:19090619 MGI:MGI:3831588 NCBI chr11:82,627,973...82,664,702
Ensembl chr11:82,630,436...82,664,630
JBrowse link
G Snai1 snail family transcriptional repressor 1 ISO (MGI:MGI:1270969|PMID:9676199) RGD PMID:9676199 MGI:MGI:1270969 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEA
ISO
GO_REF:0000107
MGI:MGI:2180861|MGI:MGI:96787 (MGI:MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107, MGI:MGI:3609466 NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040
JBrowse link
G Sox15 SRY-box transcription factor 15 ISO (MGI:MGI:3625684|PMID:16759287) RGD PMID:16759287 MGI:MGI:3625684 NCBI chr10:56,260,514...56,263,503
Ensembl chr10:56,260,514...56,263,503
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      developmental process involved in reproduction 1189
        cell differentiation involved in embryonic placenta development 32
          epithelial cell differentiation involved in embryonic placenta development + 3
          glycogen cell differentiation involved in embryonic placenta development 1
          negative regulation of cell differentiation involved in embryonic placenta development + 1
          regulation of cell differentiation involved in embryonic placenta development + 4
          spongiotrophoblast differentiation 5
          syncytiotrophoblast cell differentiation involved in labyrinthine layer development 2
          trophoblast giant cell differentiation 19
Path 2
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            reproductive system development 593
              reproductive structure development 588
                placenta development 195
                  embryonic placenta development 110
                    cell differentiation involved in embryonic placenta development 32
                      epithelial cell differentiation involved in embryonic placenta development + 3
                      glycogen cell differentiation involved in embryonic placenta development 1
                      negative regulation of cell differentiation involved in embryonic placenta development + 1
                      regulation of cell differentiation involved in embryonic placenta development + 4
                      spongiotrophoblast differentiation 5
                      syncytiotrophoblast cell differentiation involved in labyrinthine layer development 2
                      trophoblast giant cell differentiation 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.