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ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud morphogenesis
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Accession:GO:0060675 term browser browse the term
Definition:The process in which the ureteric bud is generated and organized.


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ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in ISO (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781
JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chrNW_004624744:11,462,865...11,466,559
Ensembl chrNW_004624744:11,462,847...11,467,870
JBrowse link
G Tacstd2 tumor associated calcium signal transducer 2 involved_in ISO (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chrNW_004624862:1,721,030...1,722,780 JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:9757009) UniProt PMID:9757009 NCBI chrNW_004624817:931,686...952,474
Ensembl chrNW_004624817:932,970...952,326
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624774:1,779,168...1,867,321
Ensembl chrNW_004624774:1,779,170...1,867,300
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 acts_upstream_of_or_within ISO (PMID:23661704) MGI PMID:23661704 NCBI chrNW_004624751:3,112,602...3,248,643
Ensembl chrNW_004624751:3,116,256...3,247,679
JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO (PMID:12657564)
(PMID:8675666)
MGI PMID:8675666 PMID:12657564 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:16672320)
(PMID:14699151)
MGI PMID:14699151 PMID:16672320 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (PMID:15925496) MGI PMID:15925496 NCBI chrNW_004624741:7,706,205...7,717,677
Ensembl chrNW_004624741:7,706,236...7,719,484
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
ISO (PMID:12631064)
(PMID:17522159)
UniProt
MGI
PMID:12631064 PMID:17522159 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743
JBrowse link
G Cd44 CD44 molecule (IN blood group) acts_upstream_of_or_within ISO (PMID:10926769) MGI PMID:10926769 NCBI chrNW_004624767:11,938,452...12,024,970
Ensembl chrNW_004624767:11,938,028...12,025,069
JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
NOT|involved_in
ISO PMID:15843474
(MGI:3717986|PMID:17615577)
UniProt PMID:15843474 PMID:17615577 MGI:3717986 RGD:8554075 NCBI chrNW_004624903:2,596,049...2,601,315 JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chrNW_004624753:14,630,842...14,633,245
Ensembl chrNW_004624753:14,630,827...14,632,536
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17537789) Ensembl
MGI
PMID:17537789 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234
JBrowse link
G Dchs1 dachsous cadherin-related 1 acts_upstream_of_or_within ISO (PMID:21303848) MGI PMID:21303848 NCBI chrNW_004624817:8,111,714...8,147,699
Ensembl chrNW_004624817:8,111,718...8,134,342
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within ISO (PMID:17172448)
(PMID:17435047)
(PMID:16105026)
MGI PMID:16105026 PMID:17172448 PMID:17435047 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16937369) MGI PMID:16937369 NCBI chrNW_004624872:4,096,001...4,102,392 JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO (PMID:12783782) MGI PMID:12783782 NCBI chrNW_004624744:19,782,174...19,975,496
Ensembl chrNW_004624744:19,782,790...19,977,335
JBrowse link
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO (PMID:21303848) MGI PMID:21303848 NCBI chrNW_004624777:6,095,166...6,293,142
Ensembl chrNW_004624777:6,095,643...6,292,980
JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:12631064) UniProt PMID:12631064 NCBI chrNW_004624777:3,268,674...3,321,424
Ensembl chrNW_004624777:3,268,953...3,321,145
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:16049111) MGI PMID:16049111 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741
JBrowse link
G Foxd1 forkhead box D1 acts_upstream_of_or_within ISO (PMID:13678594) MGI PMID:13678594 NCBI chrNW_004624905:2,487,981...2,490,068 JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
ISO (MGI:81287|PMID:8657307)
(PMID:13678594), (PMID:21281623)
UniProt
MGI
PMID:8657307 PMID:13678594 PMID:21281623 MGI:81287 NCBI chrNW_004624759:17,263,570...17,290,046
Ensembl chrNW_004624759:17,263,969...17,287,723
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:16396903) MGI PMID:16396903 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900
JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15925496) Ensembl
MGI
PMID:15925496 GO_REF:0000107 NCBI chrNW_004624797:13,234,741...13,678,542
Ensembl chrNW_004624797:13,230,932...13,678,742
JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO (PMID:29100091) MGI PMID:29100091 NCBI chrNW_004624770:10,223,131...10,471,309
Ensembl chrNW_004624770:10,225,669...10,345,173
JBrowse link
G Gzf1 GDNF inducible zinc finger protein 1 acts_upstream_of_or_within ISO (PMID:14522971) MGI PMID:14522971 NCBI chrNW_004624741:23,035,592...23,044,071
Ensembl chrNW_004624741:23,035,577...23,046,188
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO (PMID:11493536) MGI PMID:11493536 NCBI chrNW_004624739:3,420,501...3,424,151
Ensembl chrNW_004624739:3,418,723...3,423,950
JBrowse link
G Hs3st3b1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in ISO (PMID:32017326) MGI PMID:32017326 NCBI chrNW_004624877:2,335,258...2,376,018
Ensembl chrNW_004624877:2,332,972...2,376,277
JBrowse link
G Ilk integrin linked kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15831470) Ensembl
MGI
PMID:15831470 GO_REF:0000107 NCBI chrNW_004624817:8,096,539...8,103,096
Ensembl chrNW_004624817:8,096,898...8,106,683
JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (PMID:14568553) MGI PMID:14568553 NCBI chrNW_004624741:28,156,956...28,217,133
Ensembl chrNW_004624741:28,157,172...28,217,113
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO (MGI:5050079|PMID:7909549) UniProt PMID:7909549 MGI:5050079 NCBI chrNW_004624871:3,954,490...3,961,861
Ensembl chrNW_004624871:3,954,504...3,963,033
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806
JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO (PMID:17537792) MGI PMID:17537792 NCBI chrNW_004624830:2,881,948...2,943,577
Ensembl chrNW_004624830:2,881,638...2,943,586
JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within
ISO (PMID:1337742)
(PMID:16672320)
UniProt
MGI
PMID:1337742 PMID:16672320 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) UniProt PMID:1337742 NCBI chrNW_004624749:13,291,880...13,358,066
Ensembl chrNW_004624749:13,300,606...13,357,903
JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO (PMID:12591246) MGI PMID:12591246 NCBI chrNW_004624826:2,944,272...3,250,957
Ensembl chrNW_004624826:2,945,004...3,215,110
JBrowse link
G Pgf placental growth factor acts_upstream_of_or_within ISO (PMID:13678594) MGI PMID:13678594 NCBI chrNW_004624734:26,751,986...26,764,154
Ensembl chrNW_004624734:26,751,530...26,764,242
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793
JBrowse link
G Pspn persephin acts_upstream_of_or_within ISO (PMID:9491986) MGI PMID:9491986 NCBI chrNW_004624828:3,509,400...3,510,132 JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO (PMID:19809516) MGI PMID:19809516 NCBI chrNW_004624753:16,929,503...16,995,255
Ensembl chrNW_004624753:16,935,251...16,995,389
JBrowse link
G Sall1 spalt like transcription factor 1 involved_in
acts_upstream_of
ISO (MGI:2447943|PMID:12482961)
(PMID:24550112)
UniProt
MGI
PMID:12482961 PMID:24550112 MGI:2447943 NCBI chrNW_004624757:5,572,510...5,587,623
Ensembl chrNW_004624757:5,572,528...5,587,617
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:16396903) MGI PMID:16396903 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068
JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12783782) Ensembl
MGI
PMID:12783782 GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671
JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15925496) Ensembl
MGI
PMID:15925496 GO_REF:0000107 NCBI chrNW_004624778:14,570,025...14,629,950
Ensembl chrNW_004624778:14,570,348...14,630,325
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:83252|PMID:8787755) UniProt PMID:8787755 MGI:83252 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596
JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10572052)
(PMID:9507058)
Ensembl
MGI
PMID:9507058 PMID:10572052 GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811
JBrowse link
G Timeless timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 MGI
RGD
PMID:10963667 RGD:2308864 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Tmem59l transmembrane protein 59 like involved_in ISO (PMID:32017326) MGI PMID:32017326 NCBI chrNW_004624908:1,767,673...1,772,145
Ensembl chrNW_004624908:1,766,758...1,772,260
JBrowse link
G Wnt1 Wnt family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 NCBI chrNW_004624816:3,209,605...3,212,969
Ensembl chrNW_004624816:3,209,699...3,212,606
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO (PMID:16054034) MGI PMID:16054034 NCBI chrNW_004624764:6,913,027...6,934,650
Ensembl chrNW_004624764:6,921,811...6,933,392
JBrowse link
G Wnt6 Wnt family member 6 acts_upstream_of_or_within ISO (PMID:11948913) MGI PMID:11948913 NCBI chrNW_004624823:6,145,836...6,150,133
Ensembl chrNW_004624823:6,145,545...6,150,181
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO (PMID:16054034) MGI PMID:16054034 NCBI chrNW_004624849:2,971,658...2,979,864
Ensembl chrNW_004624849:2,957,153...2,976,179
JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (MGI:1333093|PMID:10101119)
(PMID:10101119)
UniProt PMID:10101119 MGI:1333093 NCBI chrNW_004624766:20,899,546...20,937,084
Ensembl chrNW_004624766:20,900,676...20,937,202
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chrNW_004624905:2,487,981...2,490,068 JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
ISO (MGI:3525902|PMID:15634693)
(PMID:21281623)
(PMID:12141440)
UniProt
MGI
PMID:12141440 PMID:15634693 PMID:21281623 MGI:3525902 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743
JBrowse link
G Tacstd2 tumor associated calcium signal transducer 2 involved_in ISO (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chrNW_004624862:1,721,030...1,722,780 JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO (PMID:18607644) UniProt PMID:18607644 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G Agtr1 angiotensin II receptor type 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chrNW_004624730:25,964,848...26,006,468
Ensembl chrNW_004624730:25,964,811...26,006,463
JBrowse link
G Agtr2 angiotensin II receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624967:327,627...332,000
Ensembl chrNW_004624967:329,284...330,372
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:17,263,570...17,290,046
Ensembl chrNW_004624759:17,263,969...17,287,723
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within
ISO (MGI:3714585|PMID:17522159)
(PMID:17522159)
(PMID:21281623)
UniProt
MGI
PMID:17522159 PMID:21281623 MGI:3714585 NCBI chrNW_004624804:1,606,182...1,620,932
Ensembl chrNW_004624804:1,608,757...1,620,938
JBrowse link
G Hoxb7 homeobox B7 involved_in ISO (MGI:3833510|PMID:17881463) UniProt PMID:17881463 MGI:3833510 NCBI chrNW_004624795:5,105,032...5,109,379
Ensembl chrNW_004624795:5,105,622...5,108,367
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chrNW_004624766:17,110,809...17,147,585
Ensembl chrNW_004624766:17,112,909...17,147,785
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO (MGI:3613206|PMID:16216236) UniProt PMID:16216236 MGI:3613206 NCBI chrNW_004624871:3,954,490...3,961,861
Ensembl chrNW_004624871:3,954,504...3,963,033
JBrowse link
G Maged1 MAGE family member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624981:53,502...229,889
Ensembl chrNW_004624981:222,344...233,078
JBrowse link
G Nog noggin involved_in ISO (MGI:2446986|PMID:12141440), (MGI:3714585|PMID:17522159) UniProt PMID:12141440 PMID:17522159 MGI:2446986 MGI:3714585 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325), (MGI:3833510|PMID:17881463), (MGI:5009394|PMID:17538188) UniProt PMID:17314325 PMID:17538188 PMID:17881463 MGI:3704067 MGI:3833510 MGI:5009394 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930
JBrowse link
G Pax8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:13,291,880...13,358,066
Ensembl chrNW_004624749:13,300,606...13,357,903
JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:24550112) MGI PMID:24550112 NCBI chrNW_004624757:5,572,510...5,587,623
Ensembl chrNW_004624757:5,572,528...5,587,617
JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21281623) Ensembl
MGI
PMID:21281623 GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chrNW_004624734:40,397,276...40,409,951
Ensembl chrNW_004624734:40,397,559...40,409,997
JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in ISO (MGI:4939090|PMID:21212101) UniProt PMID:21212101 MGI:4939090 NCBI chrNW_004624913:1,759,460...1,764,242
Ensembl chrNW_004624913:1,759,548...1,764,344
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:4939090|PMID:21212101) UniProt PMID:21212101 MGI:4939090 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (MGI:3611700|PMID:16291795) UniProt PMID:16291795 MGI:3611700 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO (PMID:11507767) MGI PMID:11507767 NCBI chrNW_004624772:8,305,042...8,319,882
Ensembl chrNW_004624772:8,304,708...8,319,349
JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO (PMID:8657307) UniProt PMID:8657307 NCBI chrNW_004624759:17,263,570...17,290,046
Ensembl chrNW_004624759:17,263,969...17,287,723
JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chrNW_004624734:40,397,276...40,409,951
Ensembl chrNW_004624734:40,397,559...40,409,997
JBrowse link
primary ureteric bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lzts2 leucine zipper tumor suppressor 2 acts_upstream_of_or_within ISO (PMID:21949185) MGI PMID:21949185 NCBI chrNW_004624831:599,457...608,425
Ensembl chrNW_004624831:604,154...607,824
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO (PMID:20040500) MGI PMID:20040500 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960
JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chrNW_004624734:40,397,276...40,409,951
Ensembl chrNW_004624734:40,397,559...40,409,997
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 involved_in ISO (MGI:3691408|PMID:17036046) UniProt PMID:17036046 MGI:3691408 NCBI chrNW_004624738:26,442,935...26,447,100
Ensembl chrNW_004624738:26,442,965...26,446,942
JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in ISO PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chrNW_004624759:17,263,570...17,290,046
Ensembl chrNW_004624759:17,263,969...17,287,723
JBrowse link
ureteric bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO (PMID:20040500) MGI PMID:20040500 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960
JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO (MGI:81287|PMID:8657307) UniProt PMID:8657307 MGI:81287 NCBI chrNW_004624759:17,263,570...17,290,046
Ensembl chrNW_004624759:17,263,969...17,287,723
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chrNW_004624804:1,606,182...1,620,932
Ensembl chrNW_004624804:1,608,757...1,620,938
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within ISO (PMID:9637690) MGI PMID:9637690 NCBI chrNW_004624742:10,472,607...10,695,939
Ensembl chrNW_004624742:10,475,748...10,695,525
JBrowse link
G Nog noggin involved_in ISO (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051
JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 acts_upstream_of_or_within ISO (PMID:7517224) MGI PMID:7517224 NCBI chrNW_004624804:1,124,322...1,558,781
Ensembl chrNW_004624804:1,155,071...1,558,145
JBrowse link
G Kif26b kinesin family member 26B acts_upstream_of_or_within ISO (PMID:20439720) MGI PMID:20439720 NCBI chrNW_004624771:13,972,394...14,496,647
Ensembl chrNW_004624771:13,974,912...14,495,991
JBrowse link
G Sall1 spalt like transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (MGI:2149437|PMID:11688560)
(PMID:16839447)
UniProt
MGI
PMID:11688560 PMID:16839447 MGI:2149437 NCBI chrNW_004624757:5,572,510...5,587,623
Ensembl chrNW_004624757:5,572,528...5,587,617
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15087
    multicellular organismal process 7102
      multicellular organism development 4701
        tube development 1180
          mesonephric tubule development 110
            ureteric bud development 109
              ureteric bud morphogenesis 74
                branching involved in ureteric bud morphogenesis + 66
                mesenchymal stem cell migration involved in uteric bud morphogenesis 0
                ureteric bud elongation + 8
                ureteric bud formation + 7
Path 2
Term Annotations click to browse term
  biological_process 15087
    developmental process 6147
      anatomical structure development 5785
        multicellular organism development 4701
          system development 4105
            renal system development 390
              kidney development 377
                nephron development 178
                  nephron epithelium development 133
                    nephron tubule development 111
                      nephron tubule morphogenesis 84
                        mesonephric tubule morphogenesis 75
                          ureteric bud morphogenesis 74
                            branching involved in ureteric bud morphogenesis + 66
                            mesenchymal stem cell migration involved in uteric bud morphogenesis 0
                            ureteric bud elongation + 8
                            ureteric bud formation + 7
paths to the root