Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:ureteric bud morphogenesis
go back to main search page
Accession:GO:0060675 term browser browse the term
Definition:The process in which the ureteric bud is generated and organized.


show annotations for term's descendants           Sort by:
 
ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15821257) Ensembl
Ensembl
UniProt		 PMID:15821257 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732 		JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO (PMID:15821257) UniProt PMID:15821257 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,762,371...79,767,857 		JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22194864) UniProt
Ensembl
Ensembl		 PMID:22194864 GO_REF:0000107 NCBI chr 1:58,575,433...58,577,252
Ensembl chr 1:58,575,433...58,577,252 		JBrowse link
G WNT11 Wnt family member 11 involved_in IEP (PMID:9757009) UniProt
UniProt		 PMID:9757009 NCBI chr11:76,186,325...76,210,761
Ensembl chr11:76,186,325...76,210,736 		JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in IDA (PMID:11731227) UniProt
UniProt		 PMID:11731227 NCBI chr 5:142,592,178...142,698,070
Ensembl chr 5:142,592,178...142,698,070 		JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5504318|PMID:23661704) Ensembl
Ensembl
MGI		 PMID:23661704 GO_REF:0000107 MGI:5504318 NCBI chr 5:5,140,330...5,320,304
Ensembl chr 5:5,140,330...5,320,304 		JBrowse link
G AGT angiotensinogen NOT|acts_upstream_of_or_within ISO (MGI:77583|PMID:8675666)
(MGI:2655949|PMID:12657564)		 MGI PMID:8675666 PMID:12657564 MGI:2655949 MGI:77583 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3036971|PMID:14699151)
(MGI:3768986|PMID:16672320)		 Ensembl
Ensembl
MGI		 PMID:14699151 PMID:16672320 GO_REF:0000107 MGI:3036971 MGI:3768986 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:3583399|PMID:15925496) UniProt
Ensembl
UniProt
MGI		 PMID:15925496 GO_REF:0000024 GO_REF:0000107 MGI:3583399 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO		 (PMID:12631064)
(MGI:3714585|PMID:17522159)		 UniProt
UniProt
Ensembl
MGI		 PMID:12631064 PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G CD44 CD44 molecule (Indian blood group) acts_upstream_of_or_within ISO (MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:2449954 NCBI chr11:35,139,171...35,232,402
Ensembl chr11:35,138,882...35,232,402 		JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
NOT|involved_in		 ISS
ISO		 (MGI:3717986|PMID:17615577) UniProt
UniProt
UniProt		 PMID:17615577 GO_REF:0000024 MGI:3717986 NCBI chr  X:72,301,646...72,307,157
Ensembl chr  X:72,301,638...72,307,187 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3714576|PMID:17537789) Ensembl
Ensembl
MGI		 PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3757813|PMID:17803964) Ensembl
Ensembl
MGI		 PMID:17803964 GO_REF:0000107 MGI:3757813 NCBI chr 1:9,848,276...9,910,269
Ensembl chr 1:9,848,276...9,910,336 		JBrowse link
G DCHS1 dachsous cadherin-related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4939936|PMID:21303848) Ensembl
Ensembl
MGI		 PMID:21303848 GO_REF:0000107 MGI:4939936 NCBI chr11:6,621,330...6,655,809
Ensembl chr11:6,621,330...6,655,809 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3709697|PMID:17435047)
(MGI:3699022|PMID:17172448)
(MGI:3688770|PMID:16105026)		 Ensembl
Ensembl
MGI		 PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 MGI:3688770 MGI:3699022 MGI:3709697 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330 		JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:3686561 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2662002|PMID:12783782) Ensembl
Ensembl
MGI		 PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025 		JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4939936|PMID:21303848) Ensembl
Ensembl
MGI		 PMID:21303848 GO_REF:0000107 MGI:4939936 NCBI chr 4:125,314,955...125,492,932
Ensembl chr 4:125,314,918...125,492,932 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in IDA (PMID:12631064) UniProt
UniProt		 PMID:12631064 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,708...122,898,236 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3603080|PMID:16049111) Ensembl
Ensembl
MGI		 PMID:16049111 GO_REF:0000107 MGI:3603080 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371 		JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2675756|PMID:13678594) MGI
Ensembl		 PMID:13678594 GO_REF:0000107 MGI:2675756 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:2675756|PMID:13678594), (MGI:4949995|PMID:21281623) UniProt
Ensembl
UniProt
MGI		 PMID:13678594 PMID:21281623 GO_REF:0000024 GO_REF:0000107 MGI:2675756 MGI:4949995 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3611729|PMID:16396903) Ensembl
Ensembl
MGI		 PMID:16396903 GO_REF:0000107 MGI:3611729 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100 		JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3583399|PMID:15925496) Ensembl
Ensembl
MGI		 PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr  X:133,535,745...133,985,594
Ensembl chr  X:133,535,745...133,987,100 		JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6094060|PMID:29100091) MGI
Ensembl
Ensembl		 PMID:29100091 GO_REF:0000107 MGI:6094060 NCBI chr18:21,242,232...21,526,112
Ensembl chr18:21,242,232...21,526,112 		JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2683817|PMID:14522971) Ensembl
Ensembl
MGI		 PMID:14522971 GO_REF:0000107 MGI:2683817 NCBI chr20:23,361,127...23,373,062
Ensembl chr20:23,362,182...23,373,062 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:2135652|PMID:11493536) UniProt
UniProt
Ensembl
MGI		 PMID:11493536 GO_REF:0000024 GO_REF:0000107 MGI:2135652 NCBI chr 7:27,181,157...27,185,232
Ensembl chr 7:27,181,157...27,185,232 		JBrowse link
G HOXD11 homeobox D11 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (MGI:2135652|PMID:11493536) UniProt
UniProt
MGI		 PMID:11493536 GO_REF:0000024 MGI:2135652 NCBI chr 2:176,107,280...176,115,679
Ensembl chr 2:176,104,216...176,109,754 		JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,494,032...13,601,929
Ensembl chr17:13,494,032...13,601,929 		JBrowse link
G HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,301,081...14,349,404
Ensembl chr17:14,301,081...14,349,404 		JBrowse link
G ILK integrin linked kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI		 PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr11:6,603,774...6,610,870
Ensembl chr11:6,603,708...6,610,874 		JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2678847|PMID:14568553) Ensembl
Ensembl
MGI		 PMID:14568553 GO_REF:0000107 MGI:2678847 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7909549) Ensembl
Ensembl
UniProt		 PMID:7909549 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISS UniProt
UniProt		 GO_REF:0000024 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951 		JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (PMID:15754038)
(MGI:3714574|PMID:17537792)		 BHF-UCL
Ensembl
BHF-UCL
MGI		 PMID:15754038 PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027 		JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within		 ISS
IEP
ISO		 (PMID:1337742)
(MGI:3768986|PMID:16672320)		 UniProt
UniProt
MGI		 PMID:1337742 PMID:16672320 GO_REF:0000024 MGI:3768986 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944 		JBrowse link
G PAX8 paired box 8 involved_in IEP (PMID:1337742) UniProt
UniProt		 PMID:1337742 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921 		JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2451200|PMID:12591246) Ensembl
Ensembl
MGI		 PMID:12591246 GO_REF:0000107 MGI:2451200 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296 		JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:2675756 NCBI chr14:74,941,830...74,955,764
Ensembl chr14:74,941,834...74,955,626 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEP (PMID:11891195) UniProt
UniProt		 PMID:11891195 NCBI chr 4:88,007,635...88,077,777
Ensembl chr 4:88,007,635...88,077,777 		JBrowse link
G PSPN persephin acts_upstream_of_or_within ISO (MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:1196665 NCBI chr19:6,375,148...6,375,933
Ensembl chr19:6,375,148...6,379,058 		JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4367286|PMID:19809516) Ensembl
Ensembl
MGI		 PMID:19809516 GO_REF:0000107 MGI:4367286 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of		 ISS
ISO		 (MGI:5563280|PMID:24550112) UniProt
MGI
UniProt		 PMID:24550112 GO_REF:0000024 MGI:5563280 NCBI chr16:51,135,982...51,152,334
Ensembl chr16:51,135,982...51,152,334 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:3611729|PMID:16396903) UniProt
Ensembl
UniProt
MGI		 PMID:16396903 GO_REF:0000024 GO_REF:0000107 MGI:3611729 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:2662002|PMID:12783782) UniProt
UniProt
Ensembl
MGI		 PMID:12783782 GO_REF:0000024 GO_REF:0000107 MGI:2662002 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3583399|PMID:15925496) Ensembl
MGI
Ensembl		 PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8787755) Ensembl
Ensembl
UniProt		 PMID:8787755 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
G TCF21 transcription factor 21 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:1347485|PMID:10572052)
(MGI:1202620|PMID:9507058)		 BHF-UCL
BHF-UCL
Ensembl
MGI		 PMID:9507058 PMID:10572052 GO_REF:0000024 GO_REF:0000107 MGI:1202620 MGI:1347485 NCBI chr 6:133,889,113...133,895,537
Ensembl chr 6:133,889,113...133,895,553 		JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 RGD
MGI		 PMID:10963667 RGD:2308864 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426 		JBrowse link
G TMEM59L transmembrane protein 59 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,612,870...18,621,039
Ensembl chr19:18,607,430...18,621,039 		JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI		 PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620 		JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI		 PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969 		JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2178881|PMID:11948913) Ensembl
Ensembl
MGI		 PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr 2:218,859,805...218,874,233
Ensembl chr 2:218,859,805...218,874,233 		JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI		 PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730 		JBrowse link
G WT1 WT1 transcription factor involved_in IGI (PMID:10101119) UniProt
UniProt		 PMID:10101119 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564 		JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777 		JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IDA (PMID:10706139), (PMID:17118062) UniProt
UniProt		 PMID:10706139 PMID:17118062 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO		 (PMID:12141440), (PMID:17118062)
(MGI:4949995|PMID:21281623)		 UniProt
Ensembl
UniProt
MGI		 PMID:12141440 PMID:17118062 PMID:21281623 GO_REF:0000107 MGI:4949995 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:58,575,433...58,577,252
Ensembl chr 1:58,575,433...58,577,252 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198 		JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198 		JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in IDA (PMID:18607644) UniProt
UniProt		 PMID:18607644 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576 		JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008 		JBrowse link
G AGTR2 angiotensin II receptor type 2 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IBA
IEA
IDA		 (PMID:21873635)
(PMID:17229286), (PMID:8657307)		 GO_Central
Ensembl
GO_Central
UniProt
UniProt		 PMID:8657307 PMID:17229286 PMID:21873635 GO_REF:0000107 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3714585|PMID:17522159)
(MGI:4949995|PMID:21281623)		 Ensembl
Ensembl
MGI		 PMID:17522159 PMID:21281623 GO_REF:0000107 MGI:3714585 MGI:4949995 NCBI chr15:32,718,004...32,745,106
Ensembl chr15:32,718,004...32,745,106 		JBrowse link
G HOXB7 homeobox B7 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr17:48,607,232...48,611,017
Ensembl chr17:48,607,232...48,633,572 		JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr11:27,365,961...27,472,790
Ensembl chr11:27,365,961...27,472,790 		JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612 		JBrowse link
G MAGED1 MAGE family member D1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr  X:51,803,076...51,902,354
Ensembl chr  X:51,803,007...51,902,354 		JBrowse link
G NOG noggin involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:56,593,699...56,595,611
Ensembl chr17:56,593,699...56,595,611 		JBrowse link
G PAX2 paired box 2 involved_in ISS UniProt
UniProt		 GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944 		JBrowse link
G PAX8 paired box 8 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr16:51,135,982...51,152,334
Ensembl chr16:51,135,982...51,152,334 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 (MGI:4949995|PMID:21281623) UniProt
Ensembl
UniProt
MGI		 PMID:21281623 GO_REF:0000024 GO_REF:0000107 MGI:4949995 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259 		JBrowse link
G SIX4 SIX homeobox 4 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:129,188,633...129,213,545
Ensembl chr 7:129,188,633...129,213,545 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:981,770...986,979
Ensembl chr16:981,770...986,979 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISS BHF-UCL
BHF-UCL		 GO_REF:0000024 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487 		JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2150217|PMID:11507767) Ensembl
Ensembl
MGI		 PMID:11507767 GO_REF:0000107 MGI:2150217 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165 		JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IDA (PMID:8657307) UniProt
UniProt		 PMID:8657307 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G SIX1 SIX homeobox 1 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259 		JBrowse link
G SIX4 SIX homeobox 4 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351 		JBrowse link
primary ureteric bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LZTS2 leucine zipper tumor suppressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5297624|PMID:21949185) Ensembl
Ensembl
MGI		 PMID:21949185 GO_REF:0000107 MGI:5297624 NCBI chr10:100,996,588...101,007,833
Ensembl chr10:100,996,618...101,007,836 		JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4430439|PMID:20040500) MGI
Ensembl
Ensembl		 PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059 		JBrowse link
G SIX1 SIX homeobox 1 involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259 		JBrowse link
G SIX4 SIX homeobox 4 involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351 		JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:45,005,182...45,009,452
Ensembl chr 2:45,005,182...45,009,452 		JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor involved_in ISO PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
ureteric bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4430439|PMID:20040500) MGI
Ensembl
Ensembl		 PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059 		JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS
IEA		 UniProt
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr15:32,718,004...32,745,106
Ensembl chr15:32,718,004...32,745,106 		JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1270048|PMID:9637690) MGI
Ensembl		 PMID:9637690 GO_REF:0000107 MGI:1270048 NCBI chr 1:86,914,635...87,109,982
Ensembl chr 1:86,914,635...87,109,982 		JBrowse link
G NOG noggin involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr17:56,593,699...56,595,611
Ensembl chr17:56,593,699...56,595,611 		JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMN1 formin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:65439|PMID:7517224) Ensembl
Ensembl
MGI		 PMID:7517224 GO_REF:0000107 MGI:65439 NCBI chr15:32,765,544...33,194,714
Ensembl chr15:32,765,544...33,194,714 		JBrowse link
G KIF26B kinesin family member 26B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4454194|PMID:20439720) Ensembl
Ensembl
MGI		 PMID:20439720 GO_REF:0000107 MGI:4454194 NCBI chr 1:245,154,985...245,709,432
Ensembl chr 1:245,154,985...245,709,432 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (MGI:3665498|PMID:16839447) UniProt
UniProt
MGI		 PMID:16839447 GO_REF:0000024 MGI:3665498 NCBI chr16:51,135,982...51,152,334
Ensembl chr16:51,135,982...51,152,334 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19656
    multicellular organismal process 8652
      multicellular organism development 5796
        tube development 1394
          mesonephric tubule development 118
            ureteric bud development 114
              ureteric bud morphogenesis 77
                branching involved in ureteric bud morphogenesis + 69
                mesenchymal stem cell migration involved in uteric bud morphogenesis 0
                ureteric bud elongation + 9
                ureteric bud formation + 7
Path 2
Term Annotations click to browse term
  biological_process 19656
    developmental process 7517
      anatomical structure development 6877
        multicellular organism development 5796
          system development 5325
            urogenital system development 449
              renal system development 400
                kidney development 387
                  nephron development 177
                    nephron epithelium development 133
                      nephron tubule development 111
                        nephron tubule morphogenesis 90
                          mesonephric tubule morphogenesis 81
                            ureteric bud morphogenesis 77
                              branching involved in ureteric bud morphogenesis + 69
                              mesenchymal stem cell migration involved in uteric bud morphogenesis 0
                              ureteric bud elongation + 9
                              ureteric bud formation + 7
paths to the root