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ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud morphogenesis
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Accession:GO:0060675 term browser browse the term
Definition:The process in which the ureteric bud is generated and organized.



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ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISO (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chr 1:57,838,661...57,841,444
Ensembl chr 1:59,545,625...59,546,596
JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:71,239,781...71,263,915
Ensembl chr11:74,540,169...74,560,024
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:137,949,100...138,054,553
Ensembl chr 5:144,056,387...144,078,001
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23661704) Ensembl
MGI
PMID:23661704 GO_REF:0000107 NCBI chr 5:5,470,841...5,651,360
Ensembl chr 5:5,150,365...5,329,556
JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO (PMID:12657564)
(PMID:8675666)
MGI PMID:8675666 PMID:12657564 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16672320)
(PMID:14699151)
Ensembl
MGI
PMID:14699151 PMID:16672320 GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15925496) Ensembl
MGI
PMID:15925496 GO_REF:0000107 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17522159) Ensembl
MGI
PMID:17522159 GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G CD44 CD44 molecule (IN blood group) acts_upstream_of_or_within ISO (PMID:10926769) MGI PMID:10926769 NCBI chr11:35,110,732...35,258,238
Ensembl chr11:34,985,634...35,079,009
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
NOT|involved_in
ISO PMID:15843474
(MGI:3717986|PMID:17615577)
UniProt PMID:15843474 PMID:17615577 MGI:3717986 RGD:8554075 NCBI chr  X:61,537,949...61,543,545
Ensembl chr  X:71,621,785...71,625,702
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chr 6:137,134,142...137,136,550 JBrowse link
G CLSTN1 calsyntenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,495,571...8,591,613
Ensembl chr 1:9,724,743...9,774,760
Ensembl chr 1:9,724,743...9,774,760
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17537789) Ensembl
MGI
PMID:17537789 GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17803964) Ensembl
MGI
PMID:17803964 GO_REF:0000107
G DCHS1 dachsous cadherin-related 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21303848) Ensembl
MGI
PMID:21303848 GO_REF:0000107 NCBI chr11:6,753,383...6,787,896
Ensembl chr11:6,436,536...6,456,352
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17172448)
(PMID:17435047)
(PMID:16105026)
Ensembl
MGI
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 NCBI chr 3:194,386,263...194,648,015
Ensembl chr 3:204,323,724...204,584,987
JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16937369) MGI PMID:16937369 NCBI chr 4:79,903,923...79,909,836 JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12783782) Ensembl
MGI
PMID:12783782 GO_REF:0000107 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21303848) Ensembl
MGI
PMID:21303848 GO_REF:0000107 NCBI chr 4:117,494,842...117,674,382
Ensembl chr 4:128,637,516...128,814,407
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:12631064) UniProt PMID:12631064 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16049111) Ensembl
MGI
PMID:16049111 GO_REF:0000107 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916
JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within ISO (PMID:13678594) MGI PMID:13678594 NCBI chr 5:41,867,118...41,870,497 JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:13678594), (PMID:21281623) Ensembl
MGI
PMID:13678594 PMID:21281623 GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16396903) Ensembl
MGI
PMID:16396903 GO_REF:0000107 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within ISO (PMID:15925496) MGI PMID:15925496 NCBI chr  X:122,677,072...123,131,511
Ensembl chr  X:132,979,612...133,432,441
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29100091) Ensembl
MGI
PMID:29100091 GO_REF:0000107 NCBI chr18:14,482,493...14,763,789
Ensembl chr18:18,244,575...18,400,335
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14522971) Ensembl
MGI
PMID:14522971 GO_REF:0000107 NCBI chr20:23,302,958...23,316,469
Ensembl chr20:23,655,293...23,665,989
JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11493536) Ensembl
MGI
PMID:11493536 GO_REF:0000107 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103
JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:11493536) MGI PMID:11493536 NCBI chr2B:63,386,806...63,398,777 JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO (PMID:32017326) MGI PMID:32017326 NCBI chr17:38,047,573...38,155,543 JBrowse link
G HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,302,663...37,351,099 JBrowse link
G ILK integrin linked kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15831470) Ensembl
MGI
PMID:15831470 GO_REF:0000107 NCBI chr11:6,735,735...6,742,922
Ensembl chr11:6,418,717...6,425,788
JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14568553) Ensembl
MGI
PMID:14568553 GO_REF:0000107 NCBI chr20:58,673,850...58,677,760
Ensembl chr20:59,992,130...60,055,765
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17537792) Ensembl
MGI
PMID:17537792 GO_REF:0000107 NCBI chr 4:98,365,727...98,445,746
Ensembl chr 4:108,974,971...109,054,671
JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16672320) Ensembl
MGI
PMID:16672320 GO_REF:0000107 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12591246) Ensembl
MGI
PMID:12591246 GO_REF:0000107 NCBI chr 1:139,985,392...140,311,845
Ensembl chr 1:143,778,701...144,104,797
JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (PMID:13678594) MGI PMID:13678594 NCBI chr14:55,494,152...55,508,066
Ensembl chr14:74,338,976...74,352,964
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G PSPN persephin acts_upstream_of_or_within ISO (PMID:9491986) MGI PMID:9491986 NCBI chr19:5,396,022...5,398,108
Ensembl chr19:6,318,428...6,320,344
JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19809516) Ensembl
MGI
PMID:19809516 GO_REF:0000107 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of
ISO (MGI:2447943|PMID:12482961)
(PMID:24550112)
UniProt
MGI
PMID:12482961 PMID:24550112 MGI:2447943 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16396903) Ensembl
MGI
PMID:16396903 GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12783782) Ensembl
MGI
PMID:12783782 GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15925496) Ensembl
MGI
PMID:15925496 GO_REF:0000107 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISO (MGI:83252|PMID:8787755) UniProt PMID:8787755 MGI:83252 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TCF21 transcription factor 21 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10572052)
(PMID:9507058)
Ensembl
MGI
PMID:9507058 PMID:10572052 GO_REF:0000107 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 RGD
MGI
PMID:10963667 RGD:2308864 NCBI chr12:32,465,529...32,497,581
Ensembl chr12:32,718,649...32,750,728
JBrowse link
G TMEM59L transmembrane protein 59 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,089,605...18,097,943
Ensembl chr19:19,059,660...19,067,669
JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11948913) Ensembl
MGI
PMID:11948913 GO_REF:0000107 NCBI chr2B:106,119,740...106,134,317
Ensembl chr2B:224,714,229...224,728,171
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 NCBI chr17:10,616,957...10,651,954 JBrowse link
G WT1 WT1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr 5:41,867,118...41,870,497 JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21281623) Ensembl
MGI
PMID:21281623 GO_REF:0000107 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISO (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chr 1:57,838,661...57,841,444
Ensembl chr 1:59,545,625...59,546,596
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380
JBrowse link
G AGTR2 angiotensin II receptor type 2 involved_in ISO PMID:17537984
(MGI:3808848|PMID:18607644)
UniProt PMID:17537984 PMID:18607644 MGI:3808848 RGD:1643596 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within
ISO (MGI:3714585|PMID:17522159)
(PMID:21281623)
(PMID:17522159)
UniProt
MGI
PMID:17522159 PMID:21281623 MGI:3714585 NCBI chr15:11,213,870...11,230,619 JBrowse link
G HOXB7 homeobox B7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:8,925,717...8,929,523
Ensembl chr17:9,110,864...9,114,639
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G LOC100981746 homeobox protein SIX4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (MGI:3848096|PMID:19268530) UniProt PMID:19268530 MGI:3848096 NCBI chr  X:43,999,576...44,098,848
Ensembl chr  X:51,984,080...51,992,850
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092
JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325), (MGI:3833510|PMID:17881463), (MGI:5009394|PMID:17538188) UniProt PMID:17314325 PMID:17538188 PMID:17881463 MGI:3704067 MGI:3833510 MGI:5009394 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:24550112) MGI PMID:24550112 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21281623) Ensembl
MGI
PMID:21281623 GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G SMO smoothened, frizzled class receptor involved_in ISO (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in ISO (MGI:4939090|PMID:21212101) UniProt PMID:21212101 MGI:4939090
G SOX9 SRY-box transcription factor 9 involved_in ISO (MGI:4939090|PMID:21212101) UniProt PMID:21212101 MGI:4939090 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11507767) Ensembl
MGI
PMID:11507767 GO_REF:0000107 NCBI chr 1:115,119,360...115,177,942
Ensembl chr 1:125,173,906...125,230,675
JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G LOC100981746 homeobox protein SIX4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
primary ureteric bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LZTS2 leucine zipper tumor suppressor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21949185) Ensembl
MGI
PMID:21949185 GO_REF:0000107 NCBI chr10:97,598,337...97,609,124
Ensembl chr10:101,076,884...101,084,724
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20040500) Ensembl
MGI
PMID:20040500 GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
G LOC100981746 homeobox protein SIX4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:45,109,414...45,113,887
Ensembl chr2A:46,039,582...46,044,035
JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor involved_in ISO PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
ureteric bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20040500) Ensembl
MGI
PMID:20040500 GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chr15:11,213,870...11,230,619 JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9637690) Ensembl
MGI
PMID:9637690 GO_REF:0000107 NCBI chr 1:119,432,583...119,630,472
Ensembl chr 1:88,283,872...88,475,198
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092
JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMN1 formin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7517224) Ensembl
MGI
PMID:7517224 GO_REF:0000107 NCBI chr15:11,271,794...11,698,539
Ensembl chr15:30,114,113...30,495,909
JBrowse link
G KIF26B kinesin family member 26B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20439720) Ensembl
MGI
PMID:20439720 GO_REF:0000107 NCBI chr 1:220,756,171...221,321,969
Ensembl chr 1:226,343,821...226,681,669
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (MGI:2149437|PMID:11688560)
(PMID:16839447)
UniProt
MGI
PMID:11688560 PMID:16839447 MGI:2149437 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16440
    multicellular organismal process 7208
      multicellular organism development 4975
        tube development 1228
          mesonephric tubule development 114
            ureteric bud development 113
              ureteric bud morphogenesis 78
                branching involved in ureteric bud morphogenesis + 70
                mesenchymal stem cell migration involved in uteric bud morphogenesis 0
                ureteric bud elongation + 8
                ureteric bud formation + 7
Path 2
Term Annotations click to browse term
  biological_process 16440
    developmental process 6563
      anatomical structure development 6172
        multicellular organism development 4975
          system development 4324
            renal system development 403
              kidney development 390
                nephron development 185
                  nephron epithelium development 139
                    nephron tubule development 116
                      nephron tubule morphogenesis 88
                        mesonephric tubule morphogenesis 79
                          ureteric bud morphogenesis 78
                            branching involved in ureteric bud morphogenesis + 70
                            mesenchymal stem cell migration involved in uteric bud morphogenesis 0
                            ureteric bud elongation + 8
                            ureteric bud formation + 7
paths to the root