Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:embryonic placenta morphogenesis
go back to main search page
Accession:GO:0060669 term browser browse the term
Definition:The process in which the embryonic placenta is generated and organized.


show annotations for term's descendants           Sort by:
embryonic placenta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1c cyclin-dependent kinase inhibitor 1C acts_upstream_of_or_within ISO
IEA 		MGI:1933758|MGI:3840687 (PMID:19276117)
GO_REF:0000107 		RGD
Ensembl		 PMID:19276117 GO_REF:0000107 NCBI chr 1:208,084,801...208,087,680
Ensembl chr 1:208,084,787...208,087,498 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISO (PMID:28522536) RGD PMID:28522536 NCBI chr 1:207,243,873...207,261,263
Ensembl chr 1:207,243,873...207,260,667 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:119,390,207...119,475,863
Ensembl chr 8:119,390,207...119,475,863 		JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO
IEA 		MGI:1928907 (PMID:22110054)
GO_REF:0000107 		RGD
Ensembl		 PMID:22110054 GO_REF:0000107 NCBI chr 1:82,724,842...82,731,566
Ensembl chr 1:82,724,838...82,731,572 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2153830 (PMID:7530222) RGD PMID:7530222 NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:206,723,044...206,742,801 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:2387443 (PMID:11543617) RGD PMID:11543617 NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:118,514,684...118,559,316 		JBrowse link
G Zfp568 zinc finger protein 568 acts_upstream_of_or_within
involved_in 		ISO MGI:3578538 (PMID:21094155)
(PMID:28522536) 		RGD PMID:21094155 PMID:28522536 NCBI chr 1:94,334,011...94,385,166
Ensembl chr 1:94,334,983...94,393,003 		JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin acts_upstream_of_or_within ISO MGI:2176598 (PMID:16981008) RGD PMID:16981008 NCBI chr 1:174,164,178...174,182,372
Ensembl chr 1:174,178,773...174,182,371 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790 (PMID:9435295) RGD PMID:9435295 NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:194,175,705...194,280,914 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within ISO MGI:3583769 (PMID:23610556) RGD PMID:23610556 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:73,606,860...73,618,612 		JBrowse link
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of_or_within ISO
IEA 		MGI:2183479 (PMID:10888880)
GO_REF:0000107 		RGD
Ensembl		 PMID:10888880 GO_REF:0000107 NCBI chr 8:87,805,993...87,819,229
Ensembl chr 8:87,805,993...87,819,229 		JBrowse link
G Grb2 growth factor receptor bound protein 2 acts_upstream_of_or_within ISO
IEA 		MGI:2677457 (PMID:11369229)
GO_REF:0000107 		RGD
Ensembl		 PMID:11369229 GO_REF:0000107 NCBI chr10:101,380,354...101,448,138
Ensembl chr10:101,380,356...101,448,138 		JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within ISO
IEA 		MGI:1857199 (PMID:12842419)
GO_REF:0000107 		RGD
Ensembl		 PMID:12842419 GO_REF:0000107 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:45,025,087...45,029,580 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO
IEA 		MGI:4331862 (PMID:21606200)
GO_REF:0000107 		RGD
Ensembl		 PMID:21606200 GO_REF:0000107 NCBI chr10:101,549,911...101,585,466
Ensembl chr10:101,549,862...101,585,464 		JBrowse link
G Rspo3 R-spondin 3 acts_upstream_of_or_within ISO
IEA 		MGI:3695687 (PMID:16963017)
GO_REF:0000107 		RGD
Ensembl		 PMID:16963017 GO_REF:0000107 NCBI chr 1:30,112,529...30,197,267
Ensembl chr 1:30,112,114...30,197,938 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 acts_upstream_of_or_within ISO MGI:2180861 (PMID:11481489) RGD PMID:11481489 NCBI chr10:103,692,579...103,695,975
Ensembl chr10:103,690,976...103,704,825 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within ISO
IEA 		MGI:3709554 (PMID:17174946)
GO_REF:0000107 		RGD
Ensembl		 PMID:17174946 GO_REF:0000107 NCBI chr 3:126,685,017...126,697,957
Ensembl chr 3:126,685,422...126,697,956 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO
IEA 		MGI:4456438 (PMID:30236446)
GO_REF:0000107 		RGD
Ensembl		 PMID:30236446 GO_REF:0000107 NCBI chr12:37,713,522...37,722,606
Ensembl chr12:37,713,529...37,722,606 		JBrowse link
chorio-allantoic fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in ISO
IEA 		UniProtKB:P23359 (PMID:10079236)
GO_REF:0000107 		RGD
Ensembl		 PMID:10079236 GO_REF:0000107 NCBI chr 8:85,397,629...85,520,374
Ensembl chr 8:85,396,925...85,520,189 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO
IEA 		UniProtKB:P49003 (PMID:10079236)
GO_REF:0000107 		RGD
Ensembl		 PMID:10079236 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:182,052,337...182,135,137 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO MGI:2446577 (PMID:12446788) RGD PMID:12446788 NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:237,222,432...237,225,883 		JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (PMID:10021343) RGD PMID:10021343 NCBI chr 4:6,010,081...6,232,052
Ensembl chr 4:6,128,070...6,232,005 		JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within ISO MGI:3719472 (PMID:17502352) RGD PMID:17502352 NCBI chr 1:89,957,760...89,966,213
Ensembl chr 1:89,957,760...89,966,213 		JBrowse link
G Itga4 integrin subunit alpha 4 acts_upstream_of_or_within ISO MGI:1857206 (PMID:7539359) RGD PMID:7539359 NCBI chr 3:84,569,487...84,646,276
Ensembl chr 3:84,560,369...84,641,039 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO
IEA 		MGI:98504 (PMID:10090727)
GO_REF:0000107 		RGD
Ensembl		 PMID:10090727 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:222,340,704...222,453,929 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:1857452|MGI:2153830 (PMID:7530222), (PMID:7539357) RGD PMID:7530222 PMID:7539357 NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:206,723,044...206,742,801 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:2387443 (PMID:11543617) RGD PMID:11543617 NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:118,514,684...118,559,316 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO MGI:3050540 (PMID:15226444) RGD PMID:15226444 NCBI chr 6:104,663,396...104,669,815
Ensembl chr 6:104,663,399...104,687,979 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO
IEA 		MGI:4340678 (PMID:25758223)
GO_REF:0000107 		RGD
Ensembl		 PMID:25758223 GO_REF:0000107 NCBI chr 7:70,280,360...70,415,277
Ensembl chr 7:70,285,310...70,415,274 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:1338881|MGI:2156187 (PMID:19592578) RGD PMID:19592578 NCBI chr 1:93,685,637...93,708,091
Ensembl chr 1:93,685,641...93,708,091 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO
IEA 		MGI:1338031 (PMID:19592578)
GO_REF:0000107 		RGD
Ensembl		 PMID:19592578 GO_REF:0000107 NCBI chr 8:37,798,994...37,839,881
Ensembl chr 8:37,798,995...37,855,652 		JBrowse link
labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07040695.1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr  X:105,241,568...105,246,852 JBrowse link
G Esx1 ESX homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:2153820 (PMID:9806555)
GO_REF:0000107 		RGD
Ensembl		 PMID:9806555 GO_REF:0000107 NCBI chr  X:105,241,568...105,246,733 JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO MGI:3769388 (PMID:17961533) RGD PMID:17961533 NCBI chr 5:144,965,133...144,968,051
Ensembl chr 5:144,964,751...144,984,021 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 acts_upstream_of_or_within ISO
IEA 		MGI:1276535 (PMID:20685850)
GO_REF:0000107 		RGD
Ensembl		 PMID:20685850 GO_REF:0000107 NCBI chr 6:32,952,090...33,229,829
Ensembl chr 6:32,952,090...33,195,924 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO MGI:1276523 (PMID:20685850) RGD PMID:20685850 NCBI chr 3:175,157,824...175,237,831
Ensembl chr 3:175,157,821...175,240,631 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20635
    developmental process 7282
      anatomical structure morphogenesis 3065
        embryonic morphogenesis 712
          embryonic placenta morphogenesis 34
            labyrinthine layer morphogenesis + 29
Path 2
Term Annotations click to browse term
  biological_process 20635
    developmental process 7282
      anatomical structure development 6765
        multicellular organism development 5414
          embryo development 1383
            embryo development ending in birth or egg hatching 909
              chordate embryonic development 892
                in utero embryonic development 582
                  embryonic placenta development 118
                    embryonic placenta morphogenesis 34
                      labyrinthine layer morphogenesis + 29
paths to the root