Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of ER to Golgi vesicle-mediated transport
go back to main search page
Accession:GO:0060628 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of ER to Golgi vesicle-mediated transport, the directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.


show annotations for term's descendants           Sort by:
 
regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas1 growth arrest-specific 1 involved_in ISO (PMID:21357679) RGD PMID:21357679 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:5608715|PMID:25201882) RGD PMID:25201882 MGI:5608715 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Rint1 RAD50 interactor 1 involved_in ISO
IBA		 (PMID:16571679)
PMID:21873635		 RGD PMID:16571679 PMID:21873635 RGD:13792537 NCBI chr 4:11,319,416...11,355,773
Ensembl chr 4:11,320,955...11,355,736 		JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:19706601) RGD PMID:19706601 NCBI chr 7:90,439,726...90,450,911
Ensembl chr 7:90,436,621...90,488,009 		JBrowse link
G Scfd1 sec1 family domain containing 1 IMP RGD PMID:14565970 RGD:2312425 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078 		JBrowse link
G Use1 unconventional SNARE in the ER 1 acts_upstream_of_or_within ISO MGI:3842569|MGI:3842571 (MGI:3842069|PMID:19188447) RGD PMID:19188447 MGI:3842069 NCBI chr16:18,038,284...18,041,826
Ensembl chr16:18,039,173...18,041,826 		JBrowse link
G Yipf5 Yip1 domain family, member 5 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:3574628|PMID:11489904)
(PMID:33164986)
PMID:21873635		 RGD PMID:11489904 PMID:33164986 PMID:21873635 MGI:3574628, RGD:13792537 NCBI chr18:32,123,814...32,159,752
Ensembl chr18:32,123,842...32,157,642 		JBrowse link
positive regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:15618550 RGD:9684856 NCBI chr10:43,997,983...44,014,543
Ensembl chr10:43,997,986...44,014,434 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IMP PMID:14734546 UniProt PMID:14734546 RGD:1303970 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:17855360) RGD PMID:17855360 NCBI chr 8:42,341,704...42,504,435
Ensembl chr 8:42,341,704...42,504,513 		JBrowse link
G Stx18 syntaxin 18 involved_in ISO (PMID:10788491), (PMID:19401338) RGD PMID:10788491 PMID:19401338 NCBI chr14:72,670,683...72,761,423
Ensembl chr14:72,670,411...72,761,464 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO
IEA
ISS		 (PMID:24618899)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24618899 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645 		JBrowse link
G Preb prolactin regulatory element binding involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:25,418,805...25,422,594
Ensembl chr 6:25,418,776...25,422,590 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:36,024,443...36,054,067
Ensembl chr10:36,024,382...36,054,066 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    cellular process 18359
      vesicle-mediated transport 1677
        regulation of vesicle-mediated transport 645
          regulation of ER to Golgi vesicle-mediated transport 15
            positive regulation of ER to Golgi vesicle-mediated transport 5
            regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis + 3
Path 2
Term Annotations click to browse term
  biological_process 19497
    localization 6488
      establishment of localization 4887
        transport 4725
          vesicle-mediated transport 1677
            Golgi vesicle transport 286
              endoplasmic reticulum to Golgi vesicle-mediated transport 128
                regulation of ER to Golgi vesicle-mediated transport 15
                  positive regulation of ER to Golgi vesicle-mediated transport 5
                  regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis + 3
paths to the root