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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of ER to Golgi vesicle-mediated transport
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Accession:GO:0060628 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of ER to Golgi vesicle-mediated transport, the directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.

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regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas1 growth arrest-specific 1 involved_in ISO (PMID:21357679) RGD PMID:21357679 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:5608715|PMID:25201882) RGD PMID:25201882 MGI:5608715 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584 		JBrowse link
G Rint1 RAD50 interactor 1 involved_in ISO
IBA		 (PMID:16571679)
PMID:21873635		 RGD PMID:16571679, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 4:7,851,602...7,885,446
Ensembl chr 4:7,852,224...7,885,301 		JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:19706601) RGD PMID:19706601 NCBI chr 7:98,770,840...98,782,025
Ensembl chr 7:98,770,840...98,782,025 		JBrowse link
G Scfd1 sec1 family domain containing 1 IMP RGD PMID:14565970 RGD:2312425 NCBI chr 6:72,124,408...72,202,703
Ensembl chr 6:72,124,417...72,202,713 		JBrowse link
G Use1 unconventional SNARE in the ER 1 acts_upstream_of_or_within ISO MGI:3842569|MGI:3842571 (MGI:3842069|PMID:19188447) RGD PMID:19188447 MGI:3842069 NCBI chr16:19,762,202...19,765,781
Ensembl chr16:19,762,938...19,765,782 		JBrowse link
G Yipf5 Yip1 domain family, member 5 acts_upstream_of_or_within ISO (MGI:3574628|PMID:11489904) RGD PMID:11489904 MGI:3574628 NCBI chr18:33,401,103...33,436,885
Ensembl chr18:33,401,106...33,434,775 		JBrowse link
positive regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:15618550 RGD:9684856 NCBI chr10:45,562,700...45,579,214
Ensembl chr10:45,563,547...45,579,029 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IMP PMID:14734546 UniProt PMID:14734546, PMID:14734546 RGD:1303970, RGD:1303970 NCBI chr 9:61,066,170...61,134,963
Ensembl chr 9:61,066,175...61,134,963 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:17855360) RGD PMID:17855360 NCBI chr 8:46,228,077...46,287,171 JBrowse link
G Stx18 syntaxin 18 involved_in ISO (PMID:10788491), (PMID:19401338) RGD PMID:10788491 PMID:19401338 NCBI chr14:77,402,952...77,492,910
Ensembl chr14:77,402,953...77,492,910 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158 		JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk15 mitogen-activated protein kinase 15 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24618899)		 UniProt
Ensembl
RGD		 PMID:24618899 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:117,041,287...117,061,799
Ensembl chr 7:117,055,395...117,061,047 		JBrowse link
G Preb prolactin regulatory element binding involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 6:26,784,088...26,787,875
Ensembl chr 6:26,784,088...26,787,874 		JBrowse link
G Sar1b secretion associated, Ras related GTPase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:37,215,989...37,245,603
Ensembl chr10:37,215,937...37,245,658 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20082
    cellular process 18900
      vesicle-mediated transport 1686
        regulation of vesicle-mediated transport 642
          regulation of ER to Golgi vesicle-mediated transport 15
            positive regulation of ER to Golgi vesicle-mediated transport 5
            regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis + 3
Path 2
Term Annotations click to browse term
  biological_process 20082
    localization 6506
      establishment of localization 4918
        transport 4755
          vesicle-mediated transport 1686
            Golgi vesicle transport 287
              endoplasmic reticulum to Golgi vesicle-mediated transport 130
                regulation of ER to Golgi vesicle-mediated transport 15
                  positive regulation of ER to Golgi vesicle-mediated transport 5
                  regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis + 3
paths to the root