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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of ER to Golgi vesicle-mediated transport
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Accession:GO:0060628 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of ER to Golgi vesicle-mediated transport, the directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.



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regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas1 growth arrest-specific 1 involved_in ISO (PMID:21357679) RGD PMID:21357679 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:5608715|PMID:25201882) RGD PMID:25201882 MGI:5608715 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Rint1 RAD50 interactor 1 involved_in ISO
IBA
(PMID:16571679)
GO_REF:0000033
RGD
GO_Central
PMID:16571679 GO_REF:0000033 NCBI chr 4:11,319,416...11,355,740
Ensembl chr 4:11,320,955...11,355,736
JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:19706601) RGD PMID:19706601 NCBI chr 7:90,439,726...90,450,911
Ensembl chr 7:90,436,621...90,488,009
JBrowse link
G Scfd1 sec1 family domain containing 1 IMP RGD PMID:14565970 RGD:2312425 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078
JBrowse link
G Use1 unconventional SNARE in the ER 1 acts_upstream_of_or_within ISO MGI:3842569|MGI:3842571 (MGI:3842069|PMID:19188447) RGD PMID:19188447 MGI:3842069 NCBI chr16:18,038,284...18,041,826
Ensembl chr16:18,039,173...18,041,826
JBrowse link
G Yipf5 Yip1 domain family, member 5 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
ISS
(MGI:3574628|PMID:11489904)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024
(PMID:33164986)
RGD
GO_Central
TreeGrafter
UniProt
PMID:11489904 PMID:33164986 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:3574628 NCBI chr18:32,123,814...32,136,947
Ensembl chr18:32,123,842...32,157,642
JBrowse link
positive regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:15618550 RGD:9684856 NCBI chr10:43,997,983...44,014,461
Ensembl chr10:43,997,986...44,014,434
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IMP PMID:14734546 UniProt PMID:14734546 RGD:1303970 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:17855360) RGD PMID:17855360 NCBI chr 8:42,341,704...42,504,435
Ensembl chr 8:42,341,704...42,504,513
JBrowse link
G Stx18 syntaxin 18 involved_in ISO
IEA
(PMID:10788491), (PMID:19401338)
GO_REF:0000107
RGD
Ensembl
PMID:10788491 PMID:19401338 GO_REF:0000107 NCBI chr14:72,670,683...72,761,423
Ensembl chr14:72,670,411...72,761,464
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20328
    cellular process 18788
      vesicle-mediated transport 1653
        regulation of vesicle-mediated transport 637
          regulation of ER to Golgi vesicle-mediated transport 12
            positive regulation of ER to Golgi vesicle-mediated transport 5
Path 2
Term Annotations click to browse term
  biological_process 20328
    localization 5707
      establishment of localization 4987
        transport 4667
          vesicle-mediated transport 1653
            Golgi vesicle transport 311
              endoplasmic reticulum to Golgi vesicle-mediated transport 140
                regulation of ER to Golgi vesicle-mediated transport 12
                  positive regulation of ER to Golgi vesicle-mediated transport 5
paths to the root