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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of chromosome condensation
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Accession:GO:0060623 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of chromosome condensation, the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells.



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regulation of chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 IMP positive regulation RGD PMID:15291744 RGD:1578405 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO MGI:4332146 (PMID:20169082) RGD PMID:20169082 NCBI chr16:71,021,855...71,224,067
Ensembl chr16:71,024,588...71,224,122
JBrowse link
negative regulation of chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H3f3a H3.3 histone A acts_upstream_of_or_within ISO MGI:1101768 (PMID:23903189) RGD PMID:23903189 NCBI chr13:92,533,289...92,544,902
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within ISO MGI:1097686 (PMID:23903189) RGD PMID:23903189 NCBI chr10:101,256,484...101,258,716
Ensembl chr10:101,256,480...101,258,709
JBrowse link
negative regulation of mitotic chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz1b bromodomain adjacent to zinc finger domain, 1B involved_in ISO (PMID:15543136) RGD PMID:15543136 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:15543136) RGD PMID:15543136 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
positive regulation of chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncapd2 non-SMC condensin I complex, subunit D2 involved_in ISO (PMID:17268547) RGD PMID:17268547 NCBI chr 4:157,968,814...157,992,314
Ensembl chr 4:157,968,815...157,992,020
JBrowse link
G Ncapg non-SMC condensin I complex, subunit G involved_in ISO (PMID:17268547) RGD PMID:17268547 NCBI chr14:65,403,930...65,432,902
Ensembl chr14:65,404,163...65,432,902
JBrowse link
G Ncaph non-SMC condensin I complex, subunit H involved_in ISO (PMID:17268547) RGD PMID:17268547 NCBI chr 3:114,371,937...114,399,178
Ensembl chr 3:114,371,941...114,399,180
JBrowse link
G Smc2 structural maintenance of chromosomes 2 involved_in ISO (PMID:17268547) RGD PMID:17268547 NCBI chr 5:66,806,882...66,853,478
Ensembl chr 5:66,807,011...66,853,242
JBrowse link
G Smc4 structural maintenance of chromosomes 4 involved_in ISO (PMID:17268547) RGD PMID:17268547 NCBI chr 2:153,240,243...153,268,722
Ensembl chr 2:153,240,283...153,271,571
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    cellular process 18769
      regulation of cellular process 12685
        regulation of cellular component organization 2728
          regulation of organelle organization 1263
            regulation of chromosome organization 215
              regulation of chromosome condensation 11
                negative regulation of chromosome condensation + 4
                positive regulation of chromosome condensation + 5
                regulation of mitotic chromosome condensation + 2
Path 2
Term Annotations click to browse term
  biological_process 20292
    biological regulation 13633
      regulation of biological process 13220
        regulation of cellular process 12685
          regulation of cellular component organization 2728
            regulation of organelle organization 1263
              regulation of chromosome organization 215
                regulation of chromosome condensation 11
                  negative regulation of chromosome condensation + 4
                  positive regulation of chromosome condensation + 5
                  regulation of mitotic chromosome condensation + 2
paths to the root