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ONTOLOGY REPORT - ANNOTATIONS


Term:adipose tissue development
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Accession:GO:0060612 term browser browse the term
Definition:The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.
Synonyms:related_synonym: adipogenesis



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adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AACS acetoacetyl-CoA synthetase ISO RGD PMID:16055091 RGD:2301021 NCBI chr14:28,109,845...28,169,261
Ensembl chr14:28,109,841...28,169,609
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr17:61,692,923...61,698,138
Ensembl chr17:61,692,945...61,698,146
JBrowse link
G AMER1 APC membrane recruitment protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5013668|PMID:21571217) Ensembl
MGI
PMID:21571217 GO_REF:0000107 MGI:5013668 NCBI chr  X:50,842,049...50,864,105
Ensembl chr  X:50,844,672...50,864,032
JBrowse link
G AP1S2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (MGI:5608551|PMID:24928897) MGI PMID:24928897 MGI:5608551 NCBI chr  X:12,367,785...12,397,672
Ensembl chr  X:12,367,156...12,398,496
JBrowse link
G ARID5B AT-rich interaction domain 5B involved_in IEA InterPro GO_REF:0000002 NCBI chr14:65,408,603...65,598,485
Ensembl chr14:65,408,597...65,598,486
JBrowse link
G ATF2 activating transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4420477|PMID:19948881) Ensembl
MGI
PMID:19948881 GO_REF:0000107 MGI:4420477 NCBI chr15:80,984,969...81,076,573
Ensembl chr15:80,984,977...81,091,532
JBrowse link
G BDH1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr13:132,602,372...132,647,271
Ensembl chr13:132,605,489...132,645,938
JBrowse link
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO (MGI:5013999|PMID:21551454) MGI PMID:21551454 MGI:5013999 NCBI chr 2:9,052,676...9,064,890
Ensembl chr 2:9,052,070...9,064,888
JBrowse link
G CDK4 cyclin dependent kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5755307|PMID:26657864) Ensembl
MGI
PMID:26657864 GO_REF:0000107 MGI:5755307 NCBI chr 5:23,039,206...23,041,959
Ensembl chr 5:23,038,889...23,042,061
JBrowse link
G CREB5 cAMP responsive element binding protein 5 acts_upstream_of_or_within ISO (MGI:4420477|PMID:19948881) MGI PMID:19948881 MGI:4420477 NCBI chr18:43,840,553...44,264,514
Ensembl chr18:43,844,898...44,261,294
JBrowse link
G DHRS7B dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (MGI:6103958|PMID:28930673) MGI PMID:28930673 MGI:6103958 NCBI chr12:61,320,665...61,347,542
Ensembl chr12:61,318,454...61,352,985
JBrowse link
G DYRK1B dual specificity tyrosine phosphorylation regulated kinase 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,305,837...48,314,523
Ensembl chr 6:48,305,844...48,314,886
JBrowse link
G EBF2 EBF transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5495569|PMID:23499423) Ensembl
MGI
PMID:23499423 GO_REF:0000107 MGI:5495569 NCBI chr14:9,816,992...10,027,574
Ensembl chr14:9,816,993...10,025,165
JBrowse link
G FGL1 fibrinogen like 1 acts_upstream_of_or_within ISO (MGI:5505372|PMID:23483972) MGI PMID:23483972 MGI:5505372 NCBI chr17:5,546,931...5,596,434
Ensembl chr17:5,547,089...5,576,787
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,707
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:69334|PMID:7958830) MGI PMID:7958830 MGI:69334 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3804739|PMID:18562627) MGI PMID:18562627 MGI:3804739 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G LEP leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1355047|PMID:10742101) Ensembl
MGI
PMID:10742101 GO_REF:0000107 MGI:1355047 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,447
JBrowse link
G LOC110260333 hydroxymethylglutaryl-CoA synthase, mitochondrial-like ISO RGD PMID:10357839 RGD:2326128 NCBI chr 4:101,385,486...101,404,273
Ensembl chr 4:101,385,512...101,443,405
JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,593...4,653,945
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase NOT|involved_in ISO (PMID:17983582) BHF-UCL PMID:17983582 NCBI chr 9:106,119,896...106,162,126
Ensembl chr 9:106,119,899...106,294,587
JBrowse link
G OXCT1 3-oxoacid CoA-transferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr16:26,514,497...26,659,739
Ensembl chr16:26,512,396...26,659,845
JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:3,066,853...3,111,239
Ensembl chr18:3,066,847...3,111,239
JBrowse link
G PGRMC2 progesterone receptor membrane component 2 involved_in ISO (PMID:28111073) UniProt PMID:28111073 NCBI chr 8:96,692,823...96,710,218 JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5582991|PMID:24691033) Ensembl
MGI
PMID:24691033 GO_REF:0000107 MGI:5582991 NCBI chr13:117,193,935...117,282,151
Ensembl chr13:117,180,544...117,277,232
JBrowse link
G PPARD peroxisome proliferator activated receptor delta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155659|PMID:11756685) Ensembl
MGI
PMID:11756685 GO_REF:0000107 MGI:2155659 NCBI chr 7:31,222,533...31,295,221
Ensembl chr 7:31,222,589...31,295,212
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,961,909
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5545969|PMID:21853531) UniProt PMID:21853531 MGI:5545969 NCBI chr 4:97,374,672...97,399,017
Ensembl chr 4:97,375,136...97,400,231
JBrowse link
G SELENOM selenoprotein M involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5527224|PMID:23880772) Ensembl
MGI
PMID:23880772 GO_REF:0000107 MGI:5527224 NCBI chr14:47,902,862...47,905,350
Ensembl chr14:47,902,860...47,905,440
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:4439252|PMID:20137777) UniProt PMID:20137777 MGI:4439252 NCBI chr16:51,733,170...51,858,774
Ensembl chr16:51,733,131...51,858,772
JBrowse link
G SLC25A25 solute carrier family 25 member 25 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4947900|PMID:21296886) Ensembl
MGI
PMID:21296886 GO_REF:0000107 MGI:4947900 NCBI chr 1:268,531,752...268,575,195
Ensembl chr 1:268,531,752...268,576,996
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2150451|PMID:11564878), (MGI:3850606|PMID:19286648) Ensembl
MGI
PMID:11564878 PMID:19286648 GO_REF:0000107 MGI:2150451 MGI:3850606 NCBI chr 3:40,825,151...40,830,085
Ensembl chr 3:40,710,043...40,830,737
JBrowse link
G SPART spartin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5430704|PMID:22619377) Ensembl
MGI
PMID:22619377 GO_REF:0000107 MGI:5430704 NCBI chr11:12,313,211...12,346,226
Ensembl chr11:12,313,210...12,365,426
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,907
JBrowse link
G TBL1XR1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chr13:115,312,444...115,488,228
Ensembl chr13:115,317,263...115,488,176
JBrowse link
G UBB ubiquitin B acts_upstream_of_or_within ISO (MGI:3776935|PMID:18299572) MGI PMID:18299572 MGI:3776935 NCBI chr12:59,171,258...59,172,841
Ensembl chr12:59,171,289...59,172,841
JBrowse link
G UMODL1 uromodulin like 1 acts_upstream_of_or_within ISO (MGI:5494821|PMID:23190605) MGI PMID:23190605 MGI:5494821 NCBI chr13:205,425,338...205,494,492
Ensembl chr13:205,425,295...205,493,816
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:5496939|PMID:23623498) UniProt PMID:23623498 MGI:5496939 NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,017,036
JBrowse link
G ZNF516 zinc finger protein 516 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:147,987,660...148,100,788
Ensembl chr 1:147,984,481...148,090,708
JBrowse link
fat pad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5B AT-rich interaction domain 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3771609|PMID:14651970) Ensembl
MGI
PMID:14651970 GO_REF:0000107 MGI:3771609 NCBI chr14:65,408,603...65,598,485
Ensembl chr14:65,408,597...65,598,486
JBrowse link
G ARRDC3 arrestin domain containing 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5302794|PMID:21982743) Ensembl
MGI
PMID:21982743 GO_REF:0000107 MGI:5302794 NCBI chr 2:98,430,451...98,444,835
Ensembl chr 2:98,430,465...98,444,647
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (MGI:3784949|PMID:16794820) MGI PMID:16794820 MGI:3784949 NCBI chr 7:60,631,913...60,693,359 JBrowse link
G CASR calcium sensing receptor ISO RGD PMID:21940515 RGD:7205697 NCBI chr13:138,279,785...138,364,934
Ensembl chr13:138,280,363...138,364,253
JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 involved_in ISO (MGI:3778742|PMID:18252207) BHF-UCL PMID:18252207 MGI:3778742 NCBI chr 9:10,032,163...10,066,082
Ensembl chr 9:10,032,127...10,068,464
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:1355047|PMID:10742101) MGI PMID:10742101 MGI:1355047 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G TBL1XR1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chr13:115,312,444...115,488,228
Ensembl chr13:115,317,263...115,488,176
JBrowse link
G UBB ubiquitin B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3776935|PMID:18299572) Ensembl
MGI
PMID:18299572 GO_REF:0000107 MGI:3776935 NCBI chr12:59,171,258...59,172,841
Ensembl chr12:59,171,289...59,172,841
JBrowse link
mammary gland fat development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1 colony stimulating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640884|PMID:10804170) Ensembl
MGI
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr 4:110,178,466...110,198,232
Ensembl chr 4:110,178,478...110,197,901
JBrowse link
negative regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLF7 Kruppel like factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:110,282,399...110,380,165
Ensembl chr15:110,286,436...110,536,189
JBrowse link
G LMNA lamin A/C ISO RGD PMID:22119912 RGD:10003161 NCBI chr 4:93,899,019...93,927,255
Ensembl chr 4:93,899,026...93,949,398
JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:82,044,443...82,046,377
Ensembl chr 8:82,044,644...82,046,307
JBrowse link
G SIRT1 sirtuin 1 involved_in IMP (PMID:23951196) AgBase PMID:23951196 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:15,227,850...15,245,679
Ensembl chr 2:15,227,829...15,245,667
JBrowse link
positive regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide ISO RGD PMID:14551228 RGD:12904887 NCBI chr13:66,442,106...66,453,576
Ensembl chr13:66,316,436...66,452,917
JBrowse link
G MIR103-1 microRNA mir-103-1 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr16:55,329,442...55,329,523
Ensembl chr16:55,329,442...55,329,523
JBrowse link
G MIR103-2 microRNA mir-103-2 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr17:31,808,837...31,808,916
Ensembl chr17:31,808,836...31,808,920
JBrowse link
G MIR143 microRNA mir-143 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr 2:150,578,738...150,578,817
Ensembl chr 2:150,578,738...150,578,817
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:3640632|PMID:16446356) UniProt PMID:16446356 MGI:3640632 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,288...83,684,604
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,655...68,433,947
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) UniProt PMID:27711054 MGI:5800302 NCBI chr16:51,733,170...51,858,774
Ensembl chr16:51,733,131...51,858,772
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
G SORL1 sortilin related receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,435,350...48,653,670
Ensembl chr 9:48,435,016...48,653,655
JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23081848 RGD:10003033 NCBI chr 6:54,342,774...54,377,557
Ensembl chr 6:54,342,221...54,377,155
JBrowse link
regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLAAT3 phospholipase A and acyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:8,410,540...8,444,604
Ensembl chr 2:8,408,512...8,444,604
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16579
    developmental process 6309
      anatomical structure development 5828
        animal organ development 3828
          adipose tissue development 59
            fat pad development 8
            mammary gland fat development + 1
            negative regulation of adipose tissue development 5
            positive regulation of adipose tissue development 10
            regulation of adipose tissue development + 15
Path 2
Term Annotations click to browse term
  biological_process 16579
    developmental process 6309
      anatomical structure development 5828
        multicellular organism development 5301
          system development 4992
            animal organ development 3828
              adipose tissue development 59
                fat pad development 8
                mammary gland fat development + 1
                negative regulation of adipose tissue development 5
                positive regulation of adipose tissue development 10
                regulation of adipose tissue development + 15
paths to the root