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ONTOLOGY REPORT - ANNOTATIONS


Term:adipose tissue development
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Accession:GO:0060612 term browser browse the term
Definition:The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.
Synonyms:related_synonym: adipogenesis



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adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AACS acetoacetyl-CoA synthetase involved_in IEA
ISO
Ensembl
RGD
PMID:16055091 GO_REF:0000107 RGD:2301021 NCBI chr12:125,065,435...125,143,327
Ensembl chr12:125,065,434...125,143,333
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA
ISO
Ensembl
RGD
PMID:2866764 GO_REF:0000107 RGD:2326101 NCBI chr11:108,116,705...108,148,822
Ensembl chr11:108,116,695...108,147,603
JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr20:62,302,061...62,308,862
Ensembl chr20:62,302,093...62,308,862
JBrowse link
G AMER1 APC membrane recruitment protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5013668|PMID:21571217) Ensembl
MGI
PMID:21571217 GO_REF:0000107 MGI:5013668 NCBI chr  X:64,185,117...64,205,708
Ensembl chr  X:64,185,117...64,205,708
JBrowse link
G AP1S2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (MGI:5608551|PMID:24928897) MGI PMID:24928897 MGI:5608551 NCBI chr  X:15,825,806...15,854,966
Ensembl chr  X:15,825,806...15,854,931
JBrowse link
G ARID5B AT-rich interaction domain 5B involved_in IEA
ISS
InterPro
UniProt
GO_REF:0000002 GO_REF:0000024 NCBI chr10:61,901,254...62,096,944
Ensembl chr10:61,901,684...62,096,944
JBrowse link
G ATF2 activating transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4420477|PMID:19948881) Ensembl
MGI
PMID:19948881 GO_REF:0000107 MGI:4420477 NCBI chr 2:175,072,259...175,168,203
Ensembl chr 2:175,072,250...175,168,382
JBrowse link
G BDH1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr 3:197,509,783...197,573,343
Ensembl chr 3:197,509,783...197,573,323
JBrowse link
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO (MGI:5013999|PMID:21551454) MGI PMID:21551454 MGI:5013999 NCBI chr11:62,690,262...62,709,537
Ensembl chr11:62,689,289...62,709,845
JBrowse link
G CDK4 cyclin dependent kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5755307|PMID:26657864) Ensembl
MGI
PMID:26657864 GO_REF:0000107 MGI:5755307 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CREB5 cAMP responsive element binding protein 5 acts_upstream_of_or_within ISO (MGI:4420477|PMID:19948881) MGI PMID:19948881 MGI:4420477 NCBI chr 7:28,299,321...28,825,894
Ensembl chr 7:28,299,321...28,825,894
JBrowse link
G DHRS7B dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (MGI:6103958|PMID:28930673) MGI PMID:28930673 MGI:6103958 NCBI chr17:21,123,368...21,191,445
Ensembl chr17:21,123,364...21,193,265
JBrowse link
G DYRK1B dual specificity tyrosine phosphorylation regulated kinase 1B involved_in IMP (PMID:24827035) UniProt PMID:24827035 NCBI chr19:39,825,350...39,834,162
Ensembl chr19:39,825,350...39,834,201
JBrowse link
G EBF2 EBF transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5495569|PMID:23499423) Ensembl
MGI
PMID:23499423 GO_REF:0000107 MGI:5495569 NCBI chr 8:25,841,725...26,045,413
Ensembl chr 8:25,841,725...26,045,413
JBrowse link
G FGL1 fibrinogen like 1 acts_upstream_of_or_within ISO (MGI:5505372|PMID:23483972) MGI PMID:23483972 MGI:5505372 NCBI chr 8:17,864,380...17,909,983
Ensembl chr 8:17,864,380...17,910,365
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,703,963...54,121,941
Ensembl chr16:53,701,692...54,158,512
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:69334|PMID:7958830) MGI PMID:7958830 MGI:69334 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:10357839 RGD:2326128 NCBI chr 1:119,747,996...119,768,932
Ensembl chr 1:119,748,002...119,768,905
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3804739|PMID:18562627) MGI PMID:18562627 MGI:3804739 NCBI chr 2:8,682,056...8,684,461
Ensembl chr 2:8,678,845...8,684,461
JBrowse link
G LEP leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1355047|PMID:10742101) Ensembl
MGI
PMID:10742101 GO_REF:0000107 MGI:1355047 NCBI chr 7:128,241,201...128,257,629
Ensembl chr 7:128,241,278...128,257,629
JBrowse link
G LINC-PINT long intergenic non-protein coding RNA, p53 induced transcript acts_upstream_of_or_within ISO (MGI:5788088|PMID:25909911) MGI PMID:25909911 MGI:5788088 NCBI chr 7:130,877,562...131,109,925
Ensembl chr 7:130,938,963...131,110,176
JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IMP
IBA
(PMID:17680723)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:17680723 PMID:21873635 NCBI chr11:68,298,866...68,449,275
Ensembl chr11:68,312,591...68,449,275
JBrowse link
G LRP5L LDL receptor related protein 5 like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:25,351,418...25,405,410
Ensembl chr22:25,351,418...25,405,377
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase NOT|involved_in IDA (PMID:17983582) BHF-UCL PMID:17983582 NCBI chr 7:106,248,298...106,284,983
Ensembl chr 7:106,248,298...106,285,966
JBrowse link
G OXCT1 3-oxoacid CoA-transferase 1 involved_in IEA
ISO
Ensembl
RGD
PMID:2866764 GO_REF:0000107 RGD:2326101 NCBI chr 5:41,730,065...41,870,535
Ensembl chr 5:41,730,065...41,870,425
JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:154,943,690...155,003,419
Ensembl chr 7:154,943,687...155,003,124
JBrowse link
G PGRMC2 progesterone receptor membrane component 2 involved_in IMP (PMID:28111073) UniProt PMID:28111073 NCBI chr 4:128,269,242...128,288,205
Ensembl chr 4:128,269,237...128,288,829
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5582991|PMID:24691033) Ensembl
MGI
PMID:24691033 GO_REF:0000107 MGI:5582991 NCBI chr 3:179,148,114...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PPARD peroxisome proliferator activated receptor delta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155659|PMID:11756685) Ensembl
MGI
PMID:11756685 GO_REF:0000107 MGI:2155659 NCBI chr 6:35,342,558...35,428,180
Ensembl chr 6:35,342,558...35,428,191
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089
JBrowse link
G RORC RAR related orphan receptor C involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:151,806,071...151,832,451
Ensembl chr 1:151,806,071...151,831,845
JBrowse link
G SELENOM selenoprotein M involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5527224|PMID:23880772) Ensembl
MGI
PMID:23880772 GO_REF:0000107 MGI:5527224 NCBI chr22:31,104,777...31,107,568
Ensembl chr22:31,104,772...31,120,069
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:172,325,181...172,454,525
Ensembl chr 5:172,325,000...172,454,525
JBrowse link
G SLC25A25 solute carrier family 25 member 25 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4947900|PMID:21296886) Ensembl
MGI
PMID:21296886 GO_REF:0000107 MGI:4947900 NCBI chr 9:128,068,200...128,109,245
Ensembl chr 9:128,068,201...128,109,245
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2150451|PMID:11564878), (MGI:3850606|PMID:19286648) UniProt
MGI
PMID:11564878 PMID:19286648 GO_REF:0000024 MGI:2150451 MGI:3850606 NCBI chr16:981,770...986,979
Ensembl chr16:981,770...986,979
JBrowse link
G SPART spartin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5430704|PMID:22619377) Ensembl
MGI
PMID:22619377 GO_REF:0000107 MGI:5430704 NCBI chr13:36,301,638...36,370,180
Ensembl chr13:36,301,638...36,370,180
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:77,505,997...77,616,663
Ensembl chr14:77,505,997...77,616,637
JBrowse link
G TBL1XR1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chr 3:177,019,344...177,197,482
Ensembl chr 3:177,019,340...177,228,000
JBrowse link
G UBB ubiquitin B acts_upstream_of_or_within ISO (MGI:3776935|PMID:18299572) MGI PMID:18299572 MGI:3776935 NCBI chr17:16,380,779...16,382,745
Ensembl chr17:16,380,798...16,382,745
JBrowse link
G UMODL1 uromodulin like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5494821|PMID:23190605) MGI
Ensembl
PMID:23190605 GO_REF:0000107 MGI:5494821 NCBI chr21:42,062,877...42,142,996
Ensembl chr21:42,062,959...42,143,453
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597
JBrowse link
G ZNF516 zinc finger protein 516 involved_in ISS UniProt GO_REF:0000024 NCBI chr18:76,357,682...76,495,255
Ensembl chr18:76,357,682...76,495,242
JBrowse link
fat pad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5B AT-rich interaction domain 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3771609|PMID:14651970) Ensembl
MGI
PMID:14651970 GO_REF:0000107 MGI:3771609 NCBI chr10:61,901,254...62,096,944
Ensembl chr10:61,901,684...62,096,944
JBrowse link
G ARRDC3 arrestin domain containing 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5302794|PMID:21982743) Ensembl
MGI
PMID:21982743 GO_REF:0000107 MGI:5302794 NCBI chr 5:91,368,631...91,383,332
Ensembl chr 5:91,368,631...91,383,317
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (MGI:3784949|PMID:16794820) MGI PMID:16794820 MGI:3784949 NCBI chr15:72,686,204...72,738,476
Ensembl chr15:72,686,179...72,738,475
JBrowse link
G CASR calcium sensing receptor involved_in IEA
ISO
Ensembl
RGD
PMID:21940515 GO_REF:0000107 RGD:7205697 NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,668...122,291,629
JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr11:75,768,778...75,801,534
Ensembl chr11:75,759,512...75,801,535
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:1355047|PMID:10742101) MGI PMID:10742101 MGI:1355047 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G TBL1XR1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chr 3:177,019,344...177,197,482
Ensembl chr 3:177,019,340...177,228,000
JBrowse link
G UBB ubiquitin B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3776935|PMID:18299572) Ensembl
MGI
PMID:18299572 GO_REF:0000107 MGI:3776935 NCBI chr17:16,380,779...16,382,745
Ensembl chr17:16,380,798...16,382,745
JBrowse link
mammary gland fat development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1 colony stimulating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640884|PMID:10804170) Ensembl
MGI
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
negative regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLF7 Kruppel like factor 7 involved_in IMP (PMID:16339272) UniProt PMID:16339272 NCBI chr 2:207,074,137...207,173,851
Ensembl chr 2:207,074,137...207,167,267
JBrowse link
G LMNA lamin A/C ISO RGD PMID:22119912 RGD:10003161 NCBI chr 1:156,082,573...156,140,081
Ensembl chr 1:156,082,573...156,140,081
JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:146,638,893...146,642,474
Ensembl chr 4:146,638,893...146,642,474
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:23951196) AgBase PMID:23951196 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr11:47,354,859...47,395,640
Ensembl chr11:47,354,860...47,378,547
JBrowse link
positive regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide involved_in IEA
ISO
Ensembl
RGD
PMID:14551228 GO_REF:0000107 RGD:12904887 NCBI chr 3:10,285,666...10,292,947
Ensembl chr 3:10,285,666...10,292,947
JBrowse link
G MIR103A1 microRNA 103a-1 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr 5:168,560,896...168,560,973
Ensembl chr 5:168,560,896...168,560,973
JBrowse link
G MIR103A2 microRNA 103a-2 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr20:3,917,494...3,917,571
Ensembl chr20:3,917,494...3,917,571
JBrowse link
G MIR143 microRNA 143 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr 5:149,428,918...149,429,023
Ensembl chr 5:149,428,918...149,429,023
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:3640632|PMID:16446356) UniProt PMID:16446356 MGI:3640632 NCBI chr12:100,473,866...100,564,414
Ensembl chr12:100,473,708...100,564,414
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) UniProt PMID:27711054 MGI:5800302 NCBI chr 5:172,325,181...172,454,525
Ensembl chr 5:172,325,000...172,454,525
JBrowse link
G SIRT1 sirtuin 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SORL1 sortilin related receptor 1 involved_in IDA (PMID:27322061) UniProt PMID:27322061 NCBI chr11:121,452,314...121,633,763
Ensembl chr11:121,452,314...121,633,763
JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 involved_in ISS
ISO
BHF-UCL
RGD
PMID:23081848 GO_REF:0000024 RGD:10003033 NCBI chr19:49,157,792...49,211,841
Ensembl chr19:49,157,741...49,211,836
JBrowse link
regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLAAT3 phospholipase A and acyltransferase 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:63,574,462...63,616,926
Ensembl chr11:63,573,195...63,616,883
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18536
    developmental process 7221
      anatomical structure development 6545
        animal organ development 4243
          adipose tissue development 61
            fat pad development 8
            mammary gland fat development + 1
            negative regulation of adipose tissue development 5
            positive regulation of adipose tissue development 10
            regulation of adipose tissue development + 15
Path 2
Term Annotations click to browse term
  biological_process 18536
    developmental process 7221
      anatomical structure development 6545
        multicellular organism development 5918
          system development 5592
            animal organ development 4243
              adipose tissue development 61
                fat pad development 8
                mammary gland fat development + 1
                negative regulation of adipose tissue development 5
                positive regulation of adipose tissue development 10
                regulation of adipose tissue development + 15
paths to the root