Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:adipose tissue development
go back to main search page
Accession:GO:0060612 term browser browse the term
Definition:The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.
Synonyms:related_synonym: adipogenesis


show annotations for term's descendants           Sort by:
 
adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AACS acetoacetyl-CoA synthetase ISO RGD PMID:16055091 RGD:2301021 NCBI chr26:4,852,582...4,903,329
Ensembl chr26:4,452,371...4,961,436
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812
JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr24:46,309,478...46,314,892
Ensembl chr24:46,275,175...46,491,347
JBrowse link
G AMER1 APC membrane recruitment protein 1 acts_upstream_of_or_within ISO (MGI:5013668|PMID:21571217) MGI PMID:21571217 MGI:5013668 NCBI chr  X:49,426,228...49,449,448 JBrowse link
G AP1S2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (MGI:5608551|PMID:24928897) MGI PMID:24928897 MGI:5608551 NCBI chr  X:12,075,797...12,105,911
Ensembl chr  X:12,076,724...12,103,654
JBrowse link
G ARID5B AT-rich interaction domain 5B involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:13,926,759...14,105,069
Ensembl chr 4:13,927,217...14,101,364
JBrowse link
G ATF2 activating transcription factor 2 acts_upstream_of_or_within ISO (MGI:4420477|PMID:19948881) MGI PMID:19948881 MGI:4420477 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292
JBrowse link
G BDH1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr33:30,407,021...30,422,735
Ensembl chr33:30,406,338...30,436,366
JBrowse link
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO (MGI:5013999|PMID:21551454) MGI PMID:21551454 MGI:5013999 NCBI chr18:53,958,380...53,971,120
Ensembl chr18:53,958,475...53,971,119
JBrowse link
G CDK4 cyclin dependent kinase 4 acts_upstream_of_or_within ISO (MGI:5755307|PMID:26657864) MGI PMID:26657864 MGI:5755307 NCBI chr10:1,812,864...1,815,815
Ensembl chr10:1,812,886...1,815,789
JBrowse link
G CREB5 cAMP responsive element binding protein 5 acts_upstream_of_or_within ISO (MGI:4420477|PMID:19948881) MGI PMID:19948881 MGI:4420477 NCBI chr14:41,397,016...41,891,273
Ensembl chr14:41,488,548...41,885,094
JBrowse link
G DHRS7B dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (MGI:6103958|PMID:28930673) MGI PMID:28930673 MGI:6103958 NCBI chr 5:42,603,027...42,666,446
Ensembl chr 5:42,603,078...42,665,673
JBrowse link
G DYRK1B dual specificity tyrosine phosphorylation regulated kinase 1B involved_in ISO (PMID:24827035) UniProt PMID:24827035 NCBI chr 1:113,644,191...113,652,441
Ensembl chr 1:113,644,100...113,828,488
JBrowse link
G EBF2 EBF transcription factor 2 acts_upstream_of_or_within ISO (MGI:5495569|PMID:23499423) MGI PMID:23499423 MGI:5495569 NCBI chr25:31,478,361...31,671,018
Ensembl chr25:31,478,349...31,668,555
JBrowse link
G FGL1 fibrinogen like 1 acts_upstream_of_or_within ISO (MGI:5505372|PMID:23483972) MGI PMID:23483972 MGI:5505372 NCBI chr16:41,161,314...41,191,282
Ensembl chr16:41,161,394...41,179,791
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in ISO (MGI:3840763|PMID:19234441) UniProt PMID:19234441 MGI:3840763 NCBI chr 2:61,699,864...62,080,199
Ensembl chr 2:61,652,236...62,080,059
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:69334|PMID:7958830) MGI PMID:7958830 MGI:69334 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:10357839 RGD:2326128 NCBI chr17:56,679,942...56,698,521
Ensembl chr17:56,680,301...56,698,419
JBrowse link
G LEP leptin acts_upstream_of_or_within ISO (MGI:1355047|PMID:10742101) MGI PMID:10742101 MGI:1355047 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395
JBrowse link
G LOC102151783 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3804739|PMID:18562627) MGI PMID:18562627 MGI:3804739 NCBI chr10:54,954,852...54,957,116 JBrowse link
G LRP5 LDL receptor related protein 5 involved_in ISO (PMID:17680723) BHF-UCL PMID:17680723 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase NOT|involved_in ISO (PMID:17983582) BHF-UCL PMID:17983582 NCBI chr18:14,110,045...14,211,268
Ensembl chr18:13,993,022...14,208,657
JBrowse link
G OXCT1 3-oxoacid CoA-transferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr 4:67,709,846...67,841,737
Ensembl chr 4:67,527,531...67,841,518
JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in ISO (MGI:4354659|PMID:19583951) UniProt PMID:19583951 MGI:4354659 NCBI chr16:18,066,289...18,116,007
Ensembl chr16:18,066,246...18,112,506
JBrowse link
G PGRMC2 progesterone receptor membrane component 2 involved_in ISO (PMID:28111073) UniProt PMID:28111073 NCBI chr19:12,715,286...12,733,610
Ensembl chr19:12,715,460...12,731,957
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5582991|PMID:24691033) Ensembl
MGI
PMID:24691033 GO_REF:0000107 MGI:5582991 NCBI chr34:12,600,140...12,681,905
Ensembl chr34:12,600,233...12,675,910
JBrowse link
G PPARD peroxisome proliferator activated receptor delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,492,867...4,579,340
Ensembl chr12:4,492,672...4,579,340
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in ISO (MGI:5309068|PMID:22237023) CACAO PMID:22237023 MGI:5309068 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5545969|PMID:21853531) UniProt PMID:21853531 MGI:5545969 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
G SELENOM selenoprotein M acts_upstream_of_or_within ISO (MGI:5527224|PMID:23880772) MGI PMID:23880772 MGI:5527224 NCBI chr26:24,108,342...24,111,005
Ensembl chr26:24,108,344...24,111,005
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:4439252|PMID:20137777) UniProt PMID:20137777 MGI:4439252 NCBI chr 4:39,854,213...39,950,704
Ensembl chr 4:39,854,211...39,949,958
JBrowse link
G SLC25A25 solute carrier family 25 member 25 acts_upstream_of_or_within ISO (MGI:4947900|PMID:21296886) MGI PMID:21296886 MGI:4947900 NCBI chr 9:55,358,348...55,394,624
Ensembl chr 9:55,360,043...55,394,519
JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:2150451|PMID:11564878), (MGI:3850606|PMID:19286648) MGI PMID:11564878 PMID:19286648 MGI:2150451 MGI:3850606 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638
JBrowse link
G SPART spartin acts_upstream_of_or_within ISO (MGI:5430704|PMID:22619377) MGI PMID:22619377 MGI:5430704 NCBI chr25:4,256,177...4,302,854
Ensembl chr25:4,232,533...4,316,363
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:50,291,797...50,401,202
Ensembl chr 8:50,271,010...50,401,313
JBrowse link
G TBL1XR1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chr34:40,573,631...40,690,975
Ensembl chr34:40,578,507...40,739,352
JBrowse link
G UBB ubiquitin B acts_upstream_of_or_within ISO (MGI:3776935|PMID:18299572) MGI PMID:18299572 MGI:3776935 NCBI chr 5:39,533,365...39,535,120
Ensembl chr 5:39,511,426...39,535,815
JBrowse link
G UMODL1 uromodulin like 1 acts_upstream_of_or_within ISO (MGI:5494821|PMID:23190605) MGI PMID:23190605 MGI:5494821 NCBI chr31:36,452,008...36,510,649
Ensembl chr31:36,449,660...36,510,683
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:5496939|PMID:23623498) UniProt PMID:23623498 MGI:5496939 NCBI chr26:22,162,675...22,168,149
Ensembl chr26:22,163,222...22,168,105
JBrowse link
G ZNF516 zinc finger protein 516 involved_in ISO (MGI:5616937|PMID:25578880) UniProt PMID:25578880 MGI:5616937 NCBI chr 1:3,275,255...3,400,761
Ensembl chr 1:3,274,993...3,492,201
JBrowse link
fat pad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5B AT-rich interaction domain 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3771609|PMID:14651970) Ensembl
MGI
PMID:14651970 GO_REF:0000107 MGI:3771609 NCBI chr 4:13,926,759...14,105,069
Ensembl chr 4:13,927,217...14,101,364
JBrowse link
G ARRDC3 arrestin domain containing 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5302794|PMID:21982743) Ensembl
MGI
PMID:21982743 GO_REF:0000107 MGI:5302794 NCBI chr 3:17,691,631...17,705,507
Ensembl chr 3:17,691,961...17,703,308
JBrowse link
G CASR calcium sensing receptor ISO RGD PMID:21940515 RGD:7205697 NCBI chr33:25,340,822...25,432,814
Ensembl chr33:25,405,846...25,432,559
JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 involved_in ISO (MGI:3778742|PMID:18252207) BHF-UCL PMID:18252207 MGI:3778742 NCBI chr21:22,833,659...22,850,300
Ensembl chr21:22,834,518...22,851,260
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:1355047|PMID:10742101) MGI PMID:10742101 MGI:1355047 NCBI chr10:8,348,101...8,491,435 JBrowse link
G TBL1XR1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chr34:40,573,631...40,690,975
Ensembl chr34:40,578,507...40,739,352
JBrowse link
G UBB ubiquitin B acts_upstream_of_or_within ISO (MGI:3776935|PMID:18299572) MGI PMID:18299572 MGI:3776935 NCBI chr 5:39,533,365...39,535,120
Ensembl chr 5:39,511,426...39,535,815
JBrowse link
mammary gland fat development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1 colony stimulating factor 1 acts_upstream_of_or_within ISO (MGI:3640884|PMID:10804170) MGI PMID:10804170 MGI:3640884 NCBI chr 6:42,028,454...42,047,028
Ensembl chr 6:42,034,149...42,049,371
JBrowse link
negative regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLF7 Kruppel like factor 7 involved_in ISO (PMID:16339272) UniProt PMID:16339272 NCBI chr37:15,515,563...15,607,345
Ensembl chr37:15,521,622...15,605,824
JBrowse link
G LMNA lamin A/C ISO RGD PMID:22119912 RGD:10003161 NCBI chr 7:41,702,491...41,719,870
Ensembl chr 7:41,508,450...41,746,931
JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,030,818...45,034,446
Ensembl chr15:45,031,094...45,032,784
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:23951196) AgBase PMID:23951196 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chr18:42,253,849...42,269,497
Ensembl chr18:42,253,811...42,269,727
JBrowse link
positive regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide ISO RGD PMID:14551228 RGD:12904887 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510
JBrowse link
G MIR103-1 microRNA mir-103-1 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr 4:43,182,876...43,182,937
Ensembl chr 4:43,182,871...43,182,942
JBrowse link
G MIR103-2 microRNA mir-103-2 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr24:17,468,354...17,468,430
Ensembl chr24:17,468,355...17,468,434
JBrowse link
G MIR143 microRNA mir-143 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) MGI PMID:19188425 MGI:4352813 NCBI chr 4:59,534,535...59,534,589
Ensembl chr 4:59,534,535...59,534,594
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:3640632|PMID:16446356) UniProt PMID:16446356 MGI:3640632 NCBI chr15:39,497,313...39,608,120
Ensembl chr15:39,536,290...39,608,116
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) UniProt PMID:27711054 MGI:5800302 NCBI chr 4:39,854,213...39,950,704
Ensembl chr 4:39,854,211...39,949,958
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (MGI:5319292|PMID:22315447) UniProt PMID:22315447 MGI:5319292 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G SORL1 sortilin related receptor 1 involved_in ISO (MGI:5811185|PMID:27322061)
(PMID:27322061)
UniProt PMID:27322061 MGI:5811185 NCBI chr 5:12,493,750...12,650,530
Ensembl chr 5:12,431,377...12,650,784
JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23081848 RGD:10003033 NCBI chr 1:107,261,760...107,304,157
Ensembl chr 1:107,261,756...107,303,346
JBrowse link
regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLAAT3 phospholipase A and acyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:53,367,441...53,412,165
Ensembl chr18:53,368,030...53,398,290
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13863
    developmental process 6133
      anatomical structure development 5707
        animal organ development 3764
          adipose tissue development 58
            fat pad development 7
            mammary gland fat development + 1
            negative regulation of adipose tissue development 5
            positive regulation of adipose tissue development 10
            regulation of adipose tissue development + 15
Path 2
Term Annotations click to browse term
  biological_process 13863
    developmental process 6133
      anatomical structure development 5707
        multicellular organism development 5206
          system development 4895
            animal organ development 3764
              adipose tissue development 58
                fat pad development 7
                mammary gland fat development + 1
                negative regulation of adipose tissue development 5
                positive regulation of adipose tissue development 10
                regulation of adipose tissue development + 15
paths to the root