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ONTOLOGY REPORT - ANNOTATIONS


Term:adipose tissue development
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Accession:GO:0060612 term browser browse the term
Definition:The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.
Synonyms:related_synonym: adipogenesis


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adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aacs acetoacetyl-CoA synthetase ISO RGD PMID:16055091 RGD:2301021 NCBI chrNW_004955482:4,663,818...4,694,170
Ensembl chrNW_004955482:4,666,615...4,694,021
JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chrNW_004955412:10,350,088...10,369,806
Ensembl chrNW_004955412:10,349,593...10,369,806
JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chrNW_004955528:1,753,450...1,759,886
Ensembl chrNW_004955528:1,753,450...1,759,886
JBrowse link
G Amer1 APC membrane recruitment protein 1 acts_upstream_of_or_within ISO (MGI:5013668|PMID:21571217) MGI PMID:21571217 MGI:5013668 NCBI chrNW_004955475:4,451,094...4,470,750
Ensembl chrNW_004955475:4,463,023...4,466,406
JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (MGI:5608551|PMID:24928897) MGI PMID:24928897 MGI:5608551 NCBI chrNW_004955519:2,351,754...2,370,650 JBrowse link
G Arid5b AT-rich interaction domain 5B involved_in ISO (MGI:5009387|PMID:18070594) UniProt PMID:18070594 MGI:5009387 NCBI chrNW_004955425:15,253,951...15,433,246
Ensembl chrNW_004955425:15,253,211...15,433,934
JBrowse link
G Atf2 activating transcription factor 2 acts_upstream_of_or_within ISO (MGI:4420477|PMID:19948881) MGI PMID:19948881 MGI:4420477 NCBI chrNW_004955449:332,563...411,218
Ensembl chrNW_004955449:338,193...411,218
JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chrNW_004955420:13,454,379...13,486,700
Ensembl chrNW_004955420:13,452,166...13,486,565
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO (MGI:5013999|PMID:21551454) MGI PMID:21551454 MGI:5013999 NCBI chrNW_004955599:505,725...514,225
Ensembl chrNW_004955599:507,501...514,151
JBrowse link
G Cdk4 cyclin dependent kinase 4 acts_upstream_of_or_within ISO (MGI:5755307|PMID:26657864) MGI PMID:26657864 MGI:5755307 NCBI chrNW_004955458:5,457,927...5,460,718
Ensembl chrNW_004955458:5,453,732...5,460,718
JBrowse link
G Creb5 cAMP responsive element binding protein 5 acts_upstream_of_or_within ISO (MGI:4420477|PMID:19948881) MGI PMID:19948881 MGI:4420477 NCBI chrNW_004955410:29,982,965...30,371,861
Ensembl chrNW_004955410:29,986,492...30,371,861
JBrowse link
G Dhrs7b dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (MGI:6103958|PMID:28930673) MGI PMID:28930673 MGI:6103958 NCBI chrNW_004955577:1,071,904...1,122,204
Ensembl chrNW_004955577:1,071,775...1,121,940
JBrowse link
G Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B involved_in ISO (PMID:24827035) UniProt PMID:24827035 NCBI chrNW_004955578:1,187,128...1,195,574
Ensembl chrNW_004955578:1,187,742...1,195,574
JBrowse link
G Ebf2 EBF transcription factor 2 acts_upstream_of_or_within ISO (MGI:5495569|PMID:23499423) MGI PMID:23499423 MGI:5495569 NCBI chrNW_004955403:48,674,218...48,859,843
Ensembl chrNW_004955403:48,671,777...48,859,874
JBrowse link
G Fgl1 fibrinogen like 1 acts_upstream_of_or_within ISO (MGI:5505372|PMID:23483972) MGI PMID:23483972 MGI:5505372 NCBI chrNW_004955552:1,784,046...1,813,935
Ensembl chrNW_004955552:1,783,412...1,813,935
JBrowse link
G Fto FTO alpha-ketoglutarate dependent dioxygenase involved_in ISO (MGI:3840763|PMID:19234441) UniProt PMID:19234441 MGI:3840763 NCBI chrNW_004955433:11,424,069...11,834,955
Ensembl chrNW_004955433:11,424,176...11,813,771
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:69334|PMID:7958830) MGI PMID:7958830 MGI:69334 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:10357839 RGD:2326128 NCBI chrNW_004955435:22,804,484...22,820,807
Ensembl chrNW_004955435:22,804,484...22,821,482
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3804739|PMID:18562627) MGI PMID:18562627 MGI:3804739 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO (MGI:1355047|PMID:10742101) MGI PMID:10742101 MGI:1355047 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:17680723) BHF-UCL PMID:17680723 NCBI chrNW_004955422:17,394,371...17,475,244
Ensembl chrNW_004955422:17,394,371...17,505,763
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase NOT|involved_in ISO (PMID:17983582) BHF-UCL PMID:17983582 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Oxct1 3-oxoacid CoA-transferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chrNW_004955426:25,885,518...25,998,187
Ensembl chrNW_004955426:25,885,518...26,003,743
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (MGI:4354659|PMID:19583951) UniProt PMID:19583951 MGI:4354659 NCBI chrNW_004955491:8,177,422...8,219,764
Ensembl chrNW_004955491:8,177,422...8,219,766
JBrowse link
G Pgrmc2 progesterone receptor membrane component 2 involved_in ISO (PMID:28111073) UniProt PMID:28111073 NCBI chrNW_004955428:13,260,915...13,278,656 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:5582991|PMID:24691033) MGI PMID:24691033 MGI:5582991 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5309068|PMID:22237023) CACAO PMID:22237023 MGI:5309068 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Rorc RAR related orphan receptor C involved_in ISO (MGI:5545969|PMID:21853531) UniProt PMID:21853531 MGI:5545969 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694
JBrowse link
G Selenom selenoprotein M acts_upstream_of_or_within ISO (MGI:5527224|PMID:23880772) MGI PMID:23880772 MGI:5527224 NCBI chrNW_004955455:5,294,317...5,303,621
Ensembl chrNW_004955455:5,294,503...5,296,748
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (MGI:4439252|PMID:20137777) UniProt PMID:20137777 MGI:4439252 NCBI chrNW_004955408:25,103,278...25,169,934
Ensembl chrNW_004955408:25,103,278...25,170,003
JBrowse link
G Slc25a25 solute carrier family 25 member 25 acts_upstream_of_or_within ISO (MGI:4947900|PMID:21296886) MGI PMID:21296886 MGI:4947900 NCBI chrNW_004955419:621,445...656,172
Ensembl chrNW_004955419:618,979...656,189
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:2150451|PMID:11564878), (MGI:3850606|PMID:19286648) MGI PMID:11564878 PMID:19286648 MGI:2150451 MGI:3850606 NCBI chrNW_004955442:16,236,286...16,241,093
Ensembl chrNW_004955442:16,236,232...16,241,152
JBrowse link
G Spart spartin acts_upstream_of_or_within ISO (MGI:5430704|PMID:22619377) MGI PMID:22619377 MGI:5430704 NCBI chrNW_004955431:9,758,159...9,786,468
Ensembl chrNW_004955431:9,758,053...9,786,644
JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 involved_in ISO (MGI:5917779|PMID:28698261), (MGI:6107161|PMID:27818258) UniProt PMID:27818258 PMID:28698261 MGI:5917779 MGI:6107161 NCBI chrNW_004955438:1,385,431...1,491,534
Ensembl chrNW_004955438:1,385,431...1,491,578
JBrowse link
G Tbl1xr1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chrNW_004955420:6,546,529...6,705,481
Ensembl chrNW_004955420:6,546,529...6,705,487
JBrowse link
G Umodl1 uromodulin like 1 acts_upstream_of_or_within ISO (MGI:5494821|PMID:23190605) MGI PMID:23190605 MGI:5494821 NCBI chrNW_004955407:39,508,526...39,555,604
Ensembl chrNW_004955407:39,508,471...39,548,147
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:5496939|PMID:23623498) UniProt PMID:23623498 MGI:5496939 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
G Znf516 zinc finger protein 516 involved_in ISO (MGI:5616937|PMID:25578880) UniProt PMID:25578880 MGI:5616937 NCBI chrNW_004955402:59,750,682...59,874,987
Ensembl chrNW_004955402:59,752,106...59,874,743
JBrowse link
fat pad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO (MGI:3771609|PMID:14651970) MGI PMID:14651970 MGI:3771609 NCBI chrNW_004955425:15,253,951...15,433,246
Ensembl chrNW_004955425:15,253,211...15,433,934
JBrowse link
G Arrdc3 arrestin domain containing 3 acts_upstream_of_or_within ISO (MGI:5302794|PMID:21982743) MGI PMID:21982743 MGI:5302794 NCBI chrNW_004955418:20,538,858...20,550,876
Ensembl chrNW_004955418:20,538,983...20,548,862
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (MGI:3784949|PMID:16794820) MGI PMID:16794820 MGI:3784949 NCBI chrNW_004955450:4,624,634...4,668,470
Ensembl chrNW_004955450:4,631,266...4,662,719
JBrowse link
G Casr calcium sensing receptor ISO RGD PMID:21940515 RGD:7205697 NCBI chrNW_004955427:21,486,608...21,574,017
Ensembl chrNW_004955427:21,486,427...21,575,210
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in ISO (MGI:3778742|PMID:18252207) BHF-UCL PMID:18252207 MGI:3778742 NCBI chrNW_004955414:16,059,781...16,089,727
Ensembl chrNW_004955414:16,059,781...16,089,727
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:1355047|PMID:10742101) MGI PMID:10742101 MGI:1355047 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Tbl1xr1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chrNW_004955420:6,546,529...6,705,481
Ensembl chrNW_004955420:6,546,529...6,705,487
JBrowse link
mammary gland fat development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1 colony stimulating factor 1 acts_upstream_of_or_within ISO (MGI:3640884|PMID:10804170) MGI PMID:10804170 MGI:3640884 NCBI chrNW_004955435:13,404,236...13,423,059
Ensembl chrNW_004955435:13,404,508...13,424,247
JBrowse link
negative regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf7 Kruppel like factor 7 involved_in ISO (PMID:16339272) UniProt PMID:16339272 NCBI chrNW_004955457:7,833,711...7,918,754
Ensembl chrNW_004955457:7,833,218...7,918,754
JBrowse link
G Lmna lamin A/C ISO RGD PMID:22119912 RGD:10003161 NCBI chrNW_004955545:2,290,076...2,310,982
Ensembl chrNW_004955545:2,290,037...2,313,033
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in ISO (MGI:5804084|PMID:26670484) BHF-UCL PMID:26670484 MGI:5804084 NCBI chrNW_004955428:2,325,775...2,329,122
Ensembl chrNW_004955428:2,324,834...2,329,205
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:23951196) AgBase PMID:23951196 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560
JBrowse link
positive regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide ISO RGD PMID:14551228 RGD:12904887 NCBI chrNW_004955561:1,676,475...1,682,205
Ensembl chrNW_004955561:1,676,576...1,681,812
JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:3640632|PMID:16446356) UniProt PMID:16446356 MGI:3640632 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) UniProt PMID:27711054 MGI:5800302 NCBI chrNW_004955408:25,103,278...25,169,934
Ensembl chrNW_004955408:25,103,278...25,170,003
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5319292|PMID:22315447) UniProt PMID:22315447 MGI:5319292 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:27322061)
(MGI:5811185|PMID:27322061)
UniProt PMID:27322061 MGI:5811185 NCBI chrNW_004955412:22,421,984...22,576,179
Ensembl chrNW_004955412:22,421,984...22,576,179
JBrowse link
G Trpm4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23081848 RGD:10003033 NCBI chrNW_004955559:1,539,036...1,581,800
Ensembl chrNW_004955559:1,546,365...1,581,712
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11979
    developmental process 5679
      anatomical structure development 5308
        animal organ development 3531
          adipose tissue development 53
            fat pad development 7
            mammary gland fat development + 1
            negative regulation of adipose tissue development 5
            positive regulation of adipose tissue development 7
            regulation of adipose tissue development + 11
Path 2
Term Annotations click to browse term
  biological_process 11979
    developmental process 5679
      anatomical structure development 5308
        multicellular organism development 4864
          system development 4581
            animal organ development 3531
              adipose tissue development 53
                fat pad development 7
                mammary gland fat development + 1
                negative regulation of adipose tissue development 5
                positive regulation of adipose tissue development 7
                regulation of adipose tissue development + 11
paths to the root