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ONTOLOGY REPORT - ANNOTATIONS


Term:adipose tissue development
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Accession:GO:0060612 term browser browse the term
Definition:The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.
Synonyms:related_synonym: adipogenesis



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adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AACS acetoacetyl-CoA synthetase ISO RGD PMID:16055091 RGD:2301021 NCBI chr12:122,660,621...122,737,421
Ensembl chr12:126,942,340...127,019,372
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr20:58,667,601...58,673,566
Ensembl chr20:59,985,358...59,991,668
JBrowse link
G AMER1 APC membrane recruitment protein 1 acts_upstream_of_or_within ISO (MGI:5013668|PMID:21571217) MGI PMID:21571217 MGI:5013668 NCBI chr  X:53,309,868...53,331,151
Ensembl chr  X:63,396,392...63,399,802
JBrowse link
G AP1S2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (MGI:5608551|PMID:24928897) MGI PMID:24928897 MGI:5608551 NCBI chr  X:8,449,885...8,478,932
Ensembl chr  X:15,807,476...15,836,172
JBrowse link
G ARID5B AT-rich interaction domain 5B involved_in ISO (MGI:5009387|PMID:18070594) UniProt PMID:18070594 MGI:5009387 NCBI chr10:58,426,519...58,621,986
Ensembl chr10:60,756,484...60,952,174
JBrowse link
G ATF2 activating transcription factor 2 acts_upstream_of_or_within ISO (MGI:4420477|PMID:19948881) MGI PMID:19948881 MGI:4420477 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007
JBrowse link
G BDH1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr 3:194,917,904...194,979,451
Ensembl chr 3:204,797,757...204,863,889
JBrowse link
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO (MGI:5013999|PMID:21551454) MGI PMID:21551454 MGI:5013999 NCBI chr11:58,046,842...58,064,219
Ensembl chr11:61,399,314...61,416,494
JBrowse link
G CDK4 cyclin dependent kinase 4 acts_upstream_of_or_within ISO (MGI:5755307|PMID:26657864) MGI PMID:26657864 MGI:5755307 NCBI chr12:31,174,446...31,178,597
Ensembl chr12:31,434,594...31,438,876
JBrowse link
G CREB5 cAMP responsive element binding protein 5 acts_upstream_of_or_within ISO (MGI:4420477|PMID:19948881) MGI PMID:19948881 MGI:4420477 NCBI chr 7:29,054,505...29,470,528
Ensembl chr 7:28,727,385...29,057,973
JBrowse link
G DHRS7B dehydrogenase/reductase 7B acts_upstream_of_or_within ISO (MGI:6103958|PMID:28930673) MGI PMID:28930673 MGI:6103958 NCBI chr17:30,455,933...30,520,997
Ensembl chr17:35,317,600...35,383,619
JBrowse link
G DYRK1B dual specificity tyrosine phosphorylation regulated kinase 1B involved_in ISO (PMID:24827035) UniProt PMID:24827035 NCBI chr19:36,857,223...36,866,099
Ensembl chr19:45,405,431...45,411,387
JBrowse link
G EBF2 EBF transcription factor 2 acts_upstream_of_or_within ISO (MGI:5495569|PMID:23499423) MGI PMID:23499423 MGI:5495569 NCBI chr 8:25,119,782...25,325,305
Ensembl chr 8:22,027,573...22,231,421
Ensembl chr 8:22,027,573...22,231,421
JBrowse link
G FGL1 fibrinogen like 1 acts_upstream_of_or_within ISO (MGI:5505372|PMID:23483972) MGI PMID:23483972 MGI:5505372 NCBI chr 8:17,083,524...17,128,152
Ensembl chr 8:14,035,855...14,066,956
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in ISO (MGI:3840763|PMID:19234441) UniProt PMID:19234441 MGI:3840763 NCBI chr16:33,939,300...34,343,419
Ensembl chr16:53,023,425...53,490,231
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:69334|PMID:7958830) MGI PMID:7958830 MGI:69334 NCBI chr12:22,954,946...23,096,623 JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:10357839 RGD:2326128 NCBI chr 1:82,778,489...82,798,987
Ensembl chr 1:117,775,770...117,796,679
JBrowse link
G ID2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO (MGI:3804739|PMID:18562627) MGI PMID:18562627 MGI:3804739 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G LEP leptin acts_upstream_of_or_within ISO (MGI:1355047|PMID:10742101) MGI PMID:10742101 MGI:1355047 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519
JBrowse link
G LRP5 LDL receptor related protein 5 involved_in ISO (PMID:17680723) BHF-UCL PMID:17680723 NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase NOT|involved_in ISO (PMID:17983582) BHF-UCL PMID:17983582 NCBI chr 7:98,227,071...98,262,254 JBrowse link
G OXCT1 3-oxoacid CoA-transferase 1 ISO RGD PMID:2866764 RGD:2326101 NCBI chr 5:68,528,765...68,668,305
Ensembl chr 5:73,563,758...73,710,316
JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in ISO (MGI:4354659|PMID:19583951) UniProt PMID:19583951 MGI:4354659 NCBI chr 7:146,546,658...146,605,912
Ensembl chr 7:158,276,798...158,330,911
JBrowse link
G PGRMC2 progesterone receptor membrane component 2 involved_in ISO (PMID:28111073) UniProt PMID:28111073 NCBI chr 4:120,429,896...120,449,131
Ensembl chr 4:131,730,824...131,751,094
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:5582991|PMID:24691033) MGI PMID:24691033 MGI:5582991 NCBI chr 3:176,182,765...176,272,024
Ensembl chr 3:184,355,785...184,441,977
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in ISO (MGI:5309068|PMID:22237023) CACAO PMID:22237023 MGI:5309068 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212
JBrowse link
G RORC RAR related orphan receptor C involved_in ISO (MGI:5545969|PMID:21853531) UniProt PMID:21853531 MGI:5545969 NCBI chr 1:127,164,725...127,190,479
Ensembl chr 1:130,808,705...130,834,490
JBrowse link
G SELENOM selenoprotein M acts_upstream_of_or_within ISO (MGI:5527224|PMID:23880772) MGI PMID:23880772 MGI:5527224 NCBI chr22:12,128,513...12,131,653
Ensembl chr22:29,966,602...29,969,137
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:4439252|PMID:20137777) UniProt PMID:20137777 MGI:4439252 NCBI chr 5:167,678,633...167,807,960
Ensembl chr 5:174,591,759...174,719,957
JBrowse link
G SLC25A25 solute carrier family 25 member 25 acts_upstream_of_or_within ISO (MGI:4947900|PMID:21296886) MGI PMID:21296886 MGI:4947900 NCBI chr 9:99,188,906...99,229,771
Ensembl chr 9:127,859,948...127,900,922
JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:2150451|PMID:11564878), (MGI:3850606|PMID:19286648) MGI PMID:11564878 PMID:19286648 MGI:2150451 MGI:3850606
G SPART spartin acts_upstream_of_or_within ISO (MGI:5430704|PMID:22619377) MGI PMID:22619377 MGI:5430704 NCBI chr13:17,514,720...17,582,011
Ensembl chr13:35,945,938...35,989,774
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in ISO (MGI:5917779|PMID:28698261), (MGI:6107161|PMID:27818258) UniProt PMID:27818258 PMID:28698261 MGI:5917779 MGI:6107161 NCBI chr14:58,066,123...58,170,472
Ensembl chr14:77,266,545...77,370,663
JBrowse link
G TBL1XR1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chr 3:174,067,964...174,251,913
Ensembl chr 3:182,247,335...182,429,619
JBrowse link
G UBB ubiquitin B acts_upstream_of_or_within ISO (MGI:3776935|PMID:18299572) MGI PMID:18299572 MGI:3776935 NCBI chr17:35,286,699...35,288,429 JBrowse link
G UMODL1 uromodulin like 1 acts_upstream_of_or_within ISO (MGI:5494821|PMID:23190605) MGI PMID:23190605 MGI:5494821 NCBI chr21:28,394,457...28,462,082
Ensembl chr21:41,717,761...41,783,172
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:5496939|PMID:23623498) UniProt PMID:23623498 MGI:5496939 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943
JBrowse link
G ZNF516 zinc finger protein 516 involved_in ISO (MGI:5616937|PMID:25578880) UniProt PMID:25578880 MGI:5616937 NCBI chr18:69,748,472...69,891,026
Ensembl chr18:73,026,076...73,103,609
JBrowse link
fat pad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID5B AT-rich interaction domain 5B acts_upstream_of_or_within ISO (MGI:3771609|PMID:14651970) MGI PMID:14651970 MGI:3771609 NCBI chr10:58,426,519...58,621,986
Ensembl chr10:60,756,484...60,952,174
JBrowse link
G ARRDC3 arrestin domain containing 3 acts_upstream_of_or_within ISO (MGI:5302794|PMID:21982743) MGI PMID:21982743 MGI:5302794 NCBI chr 5:23,991,325...24,005,913
Ensembl chr 5:24,126,427...24,140,858
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (MGI:3784949|PMID:16794820) MGI PMID:16794820 MGI:3784949 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964
JBrowse link
G CASR calcium sensing receptor ISO RGD PMID:21940515 RGD:7205697 NCBI chr 3:119,278,071...119,383,901
Ensembl chr 3:126,252,765...126,285,268
JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 involved_in ISO (MGI:3778742|PMID:18252207) BHF-UCL PMID:18252207 MGI:3778742 NCBI chr11:70,824,791...70,857,530
Ensembl chr11:74,126,169...74,158,854
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:1355047|PMID:10742101) MGI PMID:10742101 MGI:1355047 NCBI chr12:22,954,946...23,096,623 JBrowse link
G TBL1XR1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:5495568|PMID:23499424) MGI PMID:23499424 MGI:5495568 NCBI chr 3:174,067,964...174,251,913
Ensembl chr 3:182,247,335...182,429,619
JBrowse link
G UBB ubiquitin B acts_upstream_of_or_within ISO (MGI:3776935|PMID:18299572) MGI PMID:18299572 MGI:3776935 NCBI chr17:35,286,699...35,288,429 JBrowse link
mammary gland fat development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1 colony stimulating factor 1 acts_upstream_of_or_within ISO (MGI:3640884|PMID:10804170) MGI PMID:10804170 MGI:3640884 NCBI chr 1:112,555,755...112,575,894
Ensembl chr 1:127,764,916...127,781,943
JBrowse link
negative regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLF7 Kruppel like factor 7 involved_in ISO (PMID:16339272) UniProt PMID:16339272 NCBI chr2B:94,307,334...94,399,553
Ensembl chr2B:212,448,337...212,525,403
JBrowse link
G LMNA lamin A/C ISO RGD PMID:22119912 RGD:10003161 NCBI chr 1:131,456,819...131,482,275
Ensembl chr 1:135,253,700...135,311,539
JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in ISO (MGI:5804084|PMID:26670484) BHF-UCL PMID:26670484 MGI:5804084 NCBI chr 4:138,969,157...138,972,730
Ensembl chr 4:150,626,392...150,629,961
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:23951196) AgBase PMID:23951196 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259
JBrowse link
positive regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide ISO RGD PMID:14551228 RGD:12904887 NCBI chr 3:10,221,829...10,229,229
Ensembl chr 3:10,573,537...10,580,723
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:3640632|PMID:16446356) UniProt PMID:16446356 MGI:3640632 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (MGI:6508506|PMID:25409310) ARUK-UCL PMID:25409310 MGI:6508506 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) UniProt PMID:27711054 MGI:5800302 NCBI chr 5:167,678,633...167,807,960
Ensembl chr 5:174,591,759...174,719,957
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (MGI:5319292|PMID:22315447) UniProt PMID:22315447 MGI:5319292 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SORL1 sortilin related receptor 1 involved_in ISO (PMID:27322061)
(MGI:5811185|PMID:27322061)
UniProt PMID:27322061 MGI:5811185 NCBI chr11:116,297,014...116,477,399
Ensembl chr11:120,222,491...120,402,432
JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23081848 RGD:10003033 NCBI chr19:46,168,301...46,224,726
Ensembl chr19:55,095,029...55,150,464
JBrowse link
regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLAAT3 phospholipase A and acyltransferase 3 involved_in ISO (MGI:5825426|PMID:19136964) UniProt PMID:19136964 MGI:5825426 NCBI chr11:58,931,593...58,971,269
Ensembl chr11:62,282,487...62,322,736
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12658
    developmental process 5904
      anatomical structure development 5509
        animal organ development 3660
          adipose tissue development 55
            fat pad development 8
            mammary gland fat development + 1
            negative regulation of adipose tissue development 5
            positive regulation of adipose tissue development 7
            regulation of adipose tissue development + 12
Path 2
Term Annotations click to browse term
  biological_process 12658
    developmental process 5904
      anatomical structure development 5509
        multicellular organism development 5039
          system development 4741
            animal organ development 3660
              adipose tissue development 55
                fat pad development 8
                mammary gland fat development + 1
                negative regulation of adipose tissue development 5
                positive regulation of adipose tissue development 7
                regulation of adipose tissue development + 12
paths to the root