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ONTOLOGY REPORT - ANNOTATIONS


Term:adipose tissue development
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Accession:GO:0060612 term browser browse the term
Definition:The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.
Synonyms:related_synonym: adipogenesis



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adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07071701.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Aacs acetoacetyl-CoA synthetase IEP RGD PMID:16055091 RGD:2301021 NCBI chr12:31,113,098...31,156,411
Ensembl chr12:31,113,098...31,160,954
JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 IEP RGD PMID:2866764 RGD:2326101 NCBI chr 8:53,979,813...54,008,861
Ensembl chr 8:53,979,813...54,008,855
JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:4849324 NCBI chr 3:167,265,435...167,270,197
Ensembl chr 3:167,265,296...167,270,195
JBrowse link
G Amer1 APC membrane recruitment protein 1 acts_upstream_of_or_within ISO MGI:2446599|MGI:5086003 (MGI:5013668|PMID:21571217) RGD PMID:21571217 MGI:5013668 NCBI chr  X:60,300,595...60,316,480
Ensembl chr  X:60,295,751...60,316,440
JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO MGI:5620801 (MGI:5608551|PMID:24928897) RGD PMID:24928897 MGI:5608551 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262
JBrowse link
G Arid5b AT-rich interaction domain 5B involved_in ISO (MGI:5009387|PMID:18070594) RGD PMID:18070594 MGI:5009387 NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433
JBrowse link
G Atf2 activating transcription factor 2 acts_upstream_of_or_within ISO MGI:2443973 (MGI:4420477|PMID:19948881) RGD PMID:19948881 MGI:4420477 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 IEP RGD PMID:2866764 RGD:2326101 NCBI chr11:69,302,534...69,343,173
Ensembl chr11:69,302,534...69,337,671
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO MGI:5014325 (MGI:5013999|PMID:21551454) RGD PMID:21551454 MGI:5013999 NCBI chr 1:205,731,814...205,743,430
Ensembl chr 1:205,733,872...205,743,421
JBrowse link
G Cdk4 cyclin-dependent kinase 4 acts_upstream_of_or_within ISO MGI:2154520|MGI:2154521 (MGI:5755307|PMID:26657864) RGD PMID:26657864 MGI:5755307 NCBI chr 7:62,885,647...62,889,562
Ensembl chr 7:62,883,105...62,942,403
JBrowse link
G Creb5 cAMP responsive element binding protein 5 acts_upstream_of_or_within ISO MGI:109349 (MGI:4420477|PMID:19948881) RGD PMID:19948881 MGI:4420477 NCBI chr 4:82,393,091...82,794,320
Ensembl chr 4:82,393,730...82,790,325
JBrowse link
G Dhrs7b dehydrogenase/reductase 7B acts_upstream_of_or_within ISO MGI:2669525|MGI:5749209 (MGI:6103958|PMID:28930673) RGD PMID:28930673 MGI:6103958 NCBI chr10:45,504,344...45,537,094
Ensembl chr10:45,504,426...45,537,076
JBrowse link
G Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B involved_in ISO (PMID:24827035) RGD PMID:24827035 NCBI chr 1:83,479,139...83,497,011
Ensembl chr 1:83,479,147...83,487,169
JBrowse link
G Ebf2 EBF transcription factor 2 acts_upstream_of_or_within ISO MGI:3037977 (MGI:5495569|PMID:23499423) RGD PMID:23499423 MGI:5495569 NCBI chr15:41,435,509...41,634,403
Ensembl chr15:41,435,509...41,634,403
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:2385534|MGI:5607149 (MGI:5613864|PMID:25368121), (MGI:6471241|PMID:31730234) RGD PMID:25368121 PMID:31730234 MGI:5613864 MGI:6471241 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Fgl1 fibrinogen-like 1 acts_upstream_of_or_within ISO MGI:5510996 (MGI:5505372|PMID:23483972) RGD PMID:23483972 MGI:5505372 NCBI chr16:51,120,652...51,150,907
Ensembl chr16:51,120,694...51,151,093
JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase involved_in IEA
ISO
GO_REF:0000107
(MGI:3840763|PMID:19234441)
Ensembl
RGD
PMID:19234441 GO_REF:0000107 MGI:3840763 NCBI chr19:15,284,898...15,692,142
Ensembl chr19:15,349,696...15,692,083
JBrowse link
G Guca2b guanylate cyclase activator 2B involved_in ISO MGI:2679505 (MGI:5755207|PMID:24898144) RGD PMID:24898144 MGI:5755207 NCBI chr 5:133,246,891...133,248,941
Ensembl chr 5:133,246,909...133,248,966
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:1858044 (MGI:69334|PMID:7958830) RGD PMID:7958830 MGI:69334 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:10357839 RGD:2326128 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (MGI:6480073|PMID:31408278) RGD PMID:31408278 MGI:6480073 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3806370 (MGI:3804739|PMID:18562627) RGD PMID:18562627 MGI:3804739 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO MGI:101761 (MGI:1355047|PMID:10742101) RGD PMID:10742101 MGI:1355047 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G LOC102554748 nidogen-2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Lrp5 LDL receptor related protein 5 involved_in IBA
ISO
PMID:21873635
(PMID:17680723)
RGD PMID:17680723 PMID:21873635 RGD:13792537 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase NOT|involved_in ISO (PMID:17983582) RGD PMID:17983582 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Oxct1 3-oxoacid CoA transferase 1 IEP RGD PMID:2866764 RGD:2326101 NCBI chr 2:53,236,370...53,384,715
Ensembl chr 2:53,236,368...53,384,714
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (MGI:4354659|PMID:19583951) RGD PMID:19583951 MGI:4354659 NCBI chr 4:7,524,887...7,576,663
Ensembl chr 4:7,525,004...7,576,548
JBrowse link
G Pgrmc2 progesterone receptor membrane component 2 involved_in ISO
ISS
(PMID:28111073)
GO_REF:0000024
RGD
UniProt
PMID:28111073 GO_REF:0000024 NCBI chr 2:124,068,257...124,084,155
Ensembl chr 2:124,068,260...124,084,155
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha acts_upstream_of_or_within ISO MGI:4845856 (MGI:5582991|PMID:24691033) RGD PMID:24691033 MGI:5582991 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta acts_upstream_of_or_within ISO MGI:2386684 (MGI:2155659|PMID:11756685) RGD PMID:11756685 MGI:2155659 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5309068|PMID:22237023) RGD PMID:22237023 MGI:5309068 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in ISO (MGI:6304097|PMID:30735131) RGD PMID:30735131 MGI:6304097 NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
JBrowse link
G Rasal2 RAS protein activator like 2 involved_in ISO MGI:5897630 (MGI:6296206|PMID:28580280) RGD PMID:28580280 MGI:6296206 NCBI chr13:69,279,882...69,568,647
Ensembl chr13:69,258,622...69,569,940
JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (MGI:5545969|PMID:21853531) RGD PMID:21853531 MGI:5545969 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
JBrowse link
G Selenom selenoprotein M acts_upstream_of_or_within ISO MGI:3812975 (MGI:5527224|PMID:23880772) RGD PMID:23880772 MGI:5527224 NCBI chr14:78,395,826...78,398,429
Ensembl chr14:78,395,826...78,398,429
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (MGI:4439252|PMID:20137777) RGD PMID:20137777 MGI:4439252 NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
JBrowse link
G Slc25a25 solute carrier family 25 member 25 acts_upstream_of_or_within ISO MGI:4948968 (MGI:4947900|PMID:21296886) RGD PMID:21296886 MGI:4947900 NCBI chr 3:15,708,702...15,742,195
Ensembl chr 3:15,708,703...15,742,216
JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2154329 (MGI:2150451|PMID:11564878), (MGI:3850606|PMID:19286648)
UniProt
RGD
PMID:11564878 PMID:19286648 GO_REF:0000024 MGI:2150451 MGI:3850606 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
JBrowse link
G Spart spartin acts_upstream_of_or_within ISO MGI:5430946 (MGI:5430704|PMID:22619377) RGD PMID:22619377 MGI:5430704 NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5917779|PMID:28698261), (MGI:6107161|PMID:27818258)
UniProt
Ensembl
RGD
PMID:27818258 PMID:28698261 GO_REF:0000024 GO_REF:0000107 MGI:5917779 MGI:6107161 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
JBrowse link
G Tbl1xr1 TBL1X receptor 1 acts_upstream_of_or_within ISO MGI:5511131 (MGI:5495568|PMID:23499424) RGD PMID:23499424 MGI:5495568 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055
JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO MGI:3774112 (MGI:3776935|PMID:18299572) RGD PMID:18299572 MGI:3776935 NCBI chr10:47,247,629...47,249,335
Ensembl chr10:47,245,637...47,249,333
JBrowse link
G Umodl1 uromodulin-like 1 acts_upstream_of_or_within ISO (MGI:5494821|PMID:23190605) RGD PMID:23190605 MGI:5494821 NCBI chr20:9,027,751...9,087,133
Ensembl chr20:9,025,724...9,087,146
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5496939|PMID:23623498)
UniProt
RGD
PMID:23623498 GO_REF:0000024 MGI:5496939 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Zfp516 zinc finger protein 516 involved_in ISO (MGI:5616937|PMID:25578880) RGD PMID:25578880 MGI:5616937 NCBI chr18:76,286,453...76,386,526
Ensembl chr18:76,302,096...76,385,269
JBrowse link
fat pad development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO MGI:3771593 (MGI:3771609|PMID:14651970) RGD PMID:14651970 MGI:3771609 NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433
JBrowse link
G Arrdc3 arrestin domain containing 3 acts_upstream_of_or_within ISO MGI:3877613 (MGI:5302794|PMID:21982743) RGD PMID:21982743 MGI:5302794 NCBI chr 2:11,137,443...11,149,978
Ensembl chr 2:11,137,460...11,149,978
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3055492 (MGI:3784949|PMID:16794820) RGD PMID:16794820 MGI:3784949 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Casr calcium-sensing receptor IEP RGD PMID:21940515 RGD:7205697 NCBI chr11:64,235,251...64,304,811
Ensembl chr11:64,235,251...64,304,811
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in ISO (MGI:3778742|PMID:18252207) RGD PMID:18252207 MGI:3778742 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:6402836 (MGI:6101307|PMID:24770645) RGD PMID:24770645 MGI:6101307 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:104663 (MGI:1355047|PMID:10742101) RGD PMID:10742101 MGI:1355047 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Tbl1xr1 TBL1X receptor 1 acts_upstream_of_or_within ISO MGI:5511131 (MGI:5495568|PMID:23499424) RGD PMID:23499424 MGI:5495568 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055
JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO MGI:3774112 (MGI:3776935|PMID:18299572) RGD PMID:18299572 MGI:3776935 NCBI chr10:47,247,629...47,249,335
Ensembl chr10:47,245,637...47,249,333
JBrowse link
mammary gland fat development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1 colony stimulating factor 1 acts_upstream_of_or_within ISO MGI:1856333 (MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:3640884 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
negative regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf7 Kruppel like factor 7 involved_in ISO (PMID:16339272) RGD PMID:16339272 NCBI chr 9:65,433,683...65,526,372
NCBI chr 9:65,437,535...65,484,720
Ensembl chr 9:65,437,167...65,526,261
JBrowse link
G Lmna lamin A/C IMP RGD PMID:22119912 RGD:10003161 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
JBrowse link
G LOC120094803 Kruppel like factor 7 involved_in ISO (PMID:16339272) RGD PMID:16339272 NCBI chr 9:65,433,683...65,526,372
Ensembl chr 9:65,437,167...65,526,261
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in ISO (MGI:5804084|PMID:26670484) RGD PMID:26670484 MGI:5804084 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:23951196) RGD PMID:23951196 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6508506|PMID:25409310) RGD PMID:25409310 MGI:6508506 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
positive regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 involved_in ISO (PMID:23951196) RGD PMID:23951196 NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:14551228 RGD:12904887 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Mir103a1 microRNA 103a-1 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) RGD PMID:19188425 MGI:4352813 NCBI chr10:20,244,412...20,244,497
Ensembl chr10:20,244,412...20,244,497
JBrowse link
G Mir103a2 microRNA 103a-2 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) RGD PMID:19188425 MGI:4352813 NCBI chr 3:118,510,194...118,510,279
Ensembl chr 3:118,510,194...118,510,279
JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO (MGI:4352813|PMID:19188425) RGD PMID:19188425 MGI:4352813 NCBI chr18:55,101,006...55,101,110
Ensembl chr18:55,101,006...55,101,110
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO
IEA
(MGI:3640632|PMID:16446356)
GO_REF:0000107
RGD
Ensembl
PMID:16446356 GO_REF:0000107 MGI:3640632 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of ISO (MGI:6508506|PMID:25409310) RGD PMID:25409310 MGI:6508506 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) RGD PMID:27711054 MGI:5800302 NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5319292|PMID:22315447) RGD PMID:22315447 MGI:5319292 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:27322061)
(MGI:5811185|PMID:27322061)
RGD PMID:27322061 MGI:5811185 NCBI chr 8:42,341,704...42,504,435
Ensembl chr 8:42,341,704...42,504,513
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23081848 RGD:10003033 NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532
JBrowse link
regulation of adipose tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plaat3 phospholipase A and acyltransferase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5825426|PMID:19136964)
UniProt
RGD
PMID:19136964 GO_REF:0000024 MGI:5825426 NCBI chr 1:204,782,608...204,816,397
Ensembl chr 1:204,782,729...204,817,667
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        animal organ development 4174
          adipose tissue development 69
            fat pad development 9
            mammary gland fat development + 1
            negative regulation of adipose tissue development 6
            positive regulation of adipose tissue development 11
            regulation of adipose tissue development + 17
Path 2
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        multicellular organism development 5773
          system development 5413
            animal organ development 4174
              adipose tissue development 69
                fat pad development 9
                mammary gland fat development + 1
                negative regulation of adipose tissue development 6
                positive regulation of adipose tissue development 11
                regulation of adipose tissue development + 17
paths to the root