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ONTOLOGY REPORT - ANNOTATIONS

Term:intestinal epithelial cell development
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Accession:GO:0060576 term browser browse the term
Definition:The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell of the intestine over time, from its formation to the mature structure.


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intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21383503) Ensembl
MGI		 PMID:21383503 GO_REF:0000107 NCBI chr14:22,863,861...22,902,232
Ensembl chr14:22,885,720...22,944,206 		JBrowse link
G CDH1 cadherin 1 acts_upstream_of_or_within ISO (PMID:22766025) MGI PMID:22766025 NCBI chr 5:80,757,508...80,834,878
Ensembl chr 5:80,757,508...80,834,878 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G GSDMC gasdermin C involved_in ISO (MGI:3711638|PMID:17350798) UniProt PMID:17350798 MGI:3711638 NCBI chr13:26,906,167...26,919,599
Ensembl chr13:26,907,120...26,919,353 		JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:43,214,050...43,273,014
Ensembl chr 2:43,214,050...43,248,124 		JBrowse link
G KLF5 KLF transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23266329) Ensembl
MGI		 PMID:23266329 GO_REF:0000107 NCBI chr22:27,163,179...27,185,241
Ensembl chr22:27,162,397...27,200,871 		JBrowse link
G MIR203 microRNA mir-203 acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr 8:71,774,247...71,774,340
Ensembl chr 8:71,774,247...71,774,340 		JBrowse link
G MIR7-1 microRNA mir-7-1 acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr 1:75,509,765...75,509,828
Ensembl chr 1:75,509,743...75,509,851 		JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21307095) Ensembl
MGI		 PMID:21307095 GO_REF:0000107 NCBI chr 3:66,543,046...66,546,779
Ensembl chr 3:66,543,046...66,545,580 		JBrowse link
G PRDM1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21670299) Ensembl
MGI		 PMID:21670299 GO_REF:0000107 NCBI chr12:63,454,242...63,495,278
Ensembl chr12:63,470,974...63,495,579 		JBrowse link
G SPDEF SAM pointed domain containing ETS transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19549527) Ensembl
MGI		 PMID:19549527 GO_REF:0000107 NCBI chr12:3,814,806...3,831,724
Ensembl chr12:3,815,300...3,831,477 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23726973) Ensembl
MGI		 PMID:23726973 GO_REF:0000107 NCBI chr27:40,521,751...40,549,304
Ensembl chr27:40,523,314...40,549,332 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:29,394,760...29,495,977
Ensembl chr 5:29,394,541...29,496,251 		JBrowse link
G YIPF6 Yip1 domain family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22802641) Ensembl
MGI		 PMID:22802641 GO_REF:0000107 NCBI chr  X:53,026,414...53,049,619
Ensembl chr  X:53,026,609...53,045,376 		JBrowse link
intestinal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A ISO RGD PMID:20466941 RGD:8662316 NCBI chr12:5,746,898...5,755,103
Ensembl chr12:5,745,852...5,892,281 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15778706) Ensembl
MGI		 PMID:15778706 GO_REF:0000107 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20808783) Ensembl
MGI		 PMID:20808783 GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10564089) Ensembl
MGI		 PMID:10564089 GO_REF:0000107 NCBI chr14:40,315,409...40,319,001
Ensembl chr14:40,315,639...40,317,768 		JBrowse link
G TMIGD1 transmembrane and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:33129760) Ensembl
MGI		 PMID:33129760 GO_REF:0000107 NCBI chr 9:44,340,160...44,352,681
Ensembl chr 9:44,339,708...44,352,736 		JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:1260861 RGD:2317427 NCBI chr 7:67,487,927...67,497,747
Ensembl chr 7:67,487,927...67,497,747 		JBrowse link
positive regulation of intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TLR9 toll like receptor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:37,529,322...37,547,117
Ensembl chr20:37,542,340...37,547,114
Ensembl chr20:37,542,340...37,547,114 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    developmental process 6855
      cellular developmental process 4609
        cell development 3263
          epithelial cell development 265
            columnar/cuboidal epithelial cell development 62
              intestinal epithelial cell development 22
                intestinal epithelial cell maturation 6
                negative regulation of intestinal epithelial cell development 0
                positive regulation of intestinal epithelial cell development 1
                regulation of intestinal epithelial cell development + 1
Path 2
Term Annotations click to browse term
  biological_process 17878
    developmental process 6855
      anatomical structure development 6433
        multicellular organism development 5182
          system development 4509
            digestive system development 181
              digestive tract development 165
                intestinal epithelial cell differentiation 30
                  intestinal epithelial cell development 22
                    intestinal epithelial cell maturation 6
                    negative regulation of intestinal epithelial cell development 0
                    positive regulation of intestinal epithelial cell development 1
                    regulation of intestinal epithelial cell development + 1
paths to the root