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ONTOLOGY REPORT - ANNOTATIONS


Term:neuroepithelial cell differentiation
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Accession:GO:0060563 term browser browse the term
Definition:The process in which epiblast cells acquire specialized features of neuroepithelial cells.


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neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (MGI:1327082|PMID:9883720) RGD PMID:9883720 MGI:1327082 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (MGI:1327082|PMID:9883720) RGD PMID:9883720 MGI:1327082 NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
JBrowse link
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:95387 (MGI:5605648|PMID:25100583) RGD PMID:25100583 MGI:5605648 NCBI chr 1:53,884,711...54,034,216
Ensembl chr 1:53,905,373...54,034,216
JBrowse link
G B9d1 B9 domain containing 1 acts_upstream_of_or_within ISO MGI:5301332 (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008
JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95387 (MGI:5605648|PMID:25100583)
Ensembl
RGD
PMID:25100583 GO_REF:0000107 MGI:5605648 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:88355 (MGI:5605648|PMID:25100583) RGD PMID:25100583 MGI:5605648 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO (PMID:17309880) RGD PMID:17309880 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) RGD PMID:25463925 MGI:5615026 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:4838379|PMID:20646169)
UniProt
RGD
PMID:20646169 GO_REF:0000024 MGI:4838379 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (MGI:4838379|PMID:20646169) RGD PMID:20646169 MGI:4838379 NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
JBrowse link
G Tmem231 transmembrane protein 231 acts_upstream_of_or_within ISO MGI:4284576 (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269
JBrowse link
adrenal chromaffin cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:2387977|PMID:12361965) RGD PMID:12361965 MGI:2387977 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
G Insm1 INSM transcriptional repressor 1 involved_in ISO (MGI:3772428|PMID:18094025) RGD PMID:18094025 MGI:3772428 NCBI chr 3:133,639,790...133,642,963 JBrowse link
carotid body glomus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3581993|PMID:15878769) RGD PMID:15878769 MGI:3581993 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2180793 (MGI:3640721|PMID:16678814) RGD PMID:16678814 MGI:3640721 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
lung neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3664178|PMID:9126746) RGD PMID:9126746 MGI:3664178 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2149672 (MGI:3804618|PMID:18173746)
Ensembl
RGD
PMID:18173746 GO_REF:0000107 MGI:3804618 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bccip BRCA2 and CDKN1A interacting protein involved_in ISO (PMID:18440304) RGD PMID:18440304 NCBI chr 1:188,512,544...188,524,957
Ensembl chr 1:188,512,367...188,524,958
JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:20219091) RGD PMID:20219091 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
JBrowse link
odontoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx3 distal-less homeobox 3 acts_upstream_of_or_within ISO MGI:2386570|MGI:3813133 (MGI:5320683|PMID:22351765) RGD PMID:22351765 MGI:5320683 NCBI chr10:80,064,489...80,069,891
Ensembl chr10:80,064,489...80,069,872
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
MGI:2653208 (MGI:5912858|PMID:25027178)
PMID:21873635
RGD PMID:25027178 PMID:15763925 PMID:21873635 MGI:5912858, RGD:12911014, RGD:13792537 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase acts_upstream_of_or_within IEP
ISO
(MGI:3715055|PMID:17369251) RGD PMID:17369251 PMID:17369251 MGI:3715055, RGD:11560522 NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 IMP RGD PMID:20425127 RGD:4110819 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
positive regulation of odontoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine1 serpin family E member 1 involved_in ISO
IEA
(PMID:27046084)
GO_REF:0000107
RGD
Ensembl
PMID:27046084 GO_REF:0000107 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
regulation of odontoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT/enhancer binding protein beta involved_in IDA PMID:15308669 UniProt PMID:15308669 RGD:1599801 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Dspp dentin sialophosphoprotein involved_in IDA PMID:15308669 UniProt PMID:15308669 RGD:1599801 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Nfe2l1 nuclear factor, erythroid 2-like 1 involved_in ISO (PMID:15308669) RGD PMID:15308669 NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
JBrowse link
stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3804618|PMID:18173746) RGD PMID:18173746 MGI:3804618 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993
JBrowse link
thyroid-stimulating hormone-secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:1202291|PMID:9463347)
Ensembl
RGD
PMID:9463347 GO_REF:0000107 MGI:1202291 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (MGI:1202291|PMID:9463347) RGD PMID:9463347 MGI:1202291 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:1202291|PMID:9463347) RGD PMID:9463347 MGI:1202291 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
G Wnt4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857453 (MGI:3777488|PMID:18351662)
Ensembl
RGD
PMID:18351662 GO_REF:0000107 MGI:3777488 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular developmental process 4478
        cell differentiation 4383
          epithelial cell differentiation 714
            columnar/cuboidal epithelial cell differentiation 105
              neuroepithelial cell differentiation 27
                inhibition of neuroepithelial cell differentiation + 2
                interstitial cell of Cajal differentiation 0
                neuroendocrine cell differentiation + 9
                odontoblast differentiation + 7
                positive regulation of neuroepithelial cell differentiation + 1
Path 2
Term Annotations click to browse term
  biological_process 19492
    developmental process 6770
      anatomical structure development 6196
        tissue development 2077
          epithelium development 1279
            epithelial cell differentiation 714
              columnar/cuboidal epithelial cell differentiation 105
                neuroepithelial cell differentiation 27
                  inhibition of neuroepithelial cell differentiation + 2
                  interstitial cell of Cajal differentiation 0
                  neuroendocrine cell differentiation + 9
                  odontoblast differentiation + 7
                  positive regulation of neuroepithelial cell differentiation + 1
paths to the root