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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial tube morphogenesis
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Accession:GO:0060562 term browser browse the term
Definition:The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.



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epithelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GREB1L GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6094060|PMID:29100091) MGI
Ensembl
PMID:29100091 GO_REF:0000107 MGI:6094060 NCBI chr18:21,242,232...21,526,112
Ensembl chr18:21,242,232...21,526,112
JBrowse link
G PRKX protein kinase X-linked involved_in IDA (PMID:17980165) UniProt
UniProt
PMID:17980165 NCBI chr  X:3,604,340...3,713,649
Ensembl chr  X:3,604,340...3,713,649
JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP3 caspase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5050793|PMID:21515572) Ensembl
MGI
Ensembl
PMID:21515572 GO_REF:0000107 MGI:5050793 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,649,509
JBrowse link
G FOLR1 folate receptor alpha involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5050793|PMID:21515572) Ensembl
MGI
Ensembl
PMID:21515572 GO_REF:0000107 MGI:5050793 NCBI chr 8:101,492,439...101,681,200
Ensembl chr 8:101,492,439...101,669,726
JBrowse link
G SPECC1L sperm antigen with calponin homology and coiled-coil domains 1 like acts_upstream_of_or_within ISO (MGI:6101898|PMID:26787558) MGI PMID:26787558 MGI:6101898 NCBI chr22:24,270,831...24,417,738
Ensembl chr22:24,270,817...24,417,739
JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATAD2A GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (MGI:3762244|PMID:17565372) MGI PMID:17565372 MGI:3762244 NCBI chr19:19,385,843...19,508,932
Ensembl chr19:19,385,826...19,508,932
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:80520|PMID:8622765) MGI PMID:8622765 MGI:80520 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
blood vessel lumenization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131
JBrowse link
BMP signaling pathway involved in nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IDA (PMID:10021330) UniProt
UniProt
PMID:10021330 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3814777|PMID:18614704) Ensembl
Ensembl
MGI
PMID:18614704 GO_REF:0000107 MGI:3814777 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in IDA (PMID:11731227) UniProt
UniProt
PMID:11731227 NCBI chr 5:142,592,178...142,698,070
Ensembl chr 5:142,592,178...142,698,070
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703113|PMID:17078885) Ensembl
MGI
Ensembl
PMID:17078885 GO_REF:0000107 MGI:3703113 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:1889403 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IMP (PMID:20818663) BHF-UCL
BHF-UCL
PMID:20818663 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,157
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IC
IMP
IEA
ISO
(PMID:20123964)
(MGI:3833040|PMID:19154719)
(MGI:2675534|PMID:12975353)
BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:12975353 PMID:19154719 PMID:20123964 GO_REF:0000107 MGI:2675534 MGI:3833040 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chr10:44,370,165...44,385,097
Ensembl chr10:44,370,165...44,386,493
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,119,177
JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073
JBrowse link
G EDN1 endothelin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74210|PMID:7615798) Ensembl
Ensembl
MGI
PMID:7615798 GO_REF:0000107 MGI:74210 NCBI chr 6:12,256,484...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EDNRA endothelin receptor type A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3606840|PMID:15664398) Ensembl
Ensembl
MGI
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954
JBrowse link
G ENG endoglin involved_in ISS
IEA
(PMID:8194490) BHF-UCL
BHF-UCL
Ensembl
PMID:8194490 GO_REF:0000107 NCBI chr 9:127,815,012...127,854,773
Ensembl chr 9:127,815,013...127,854,658
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588904|PMID:15996652) Ensembl
Ensembl
MGI
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:3045573 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145
JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3606840|PMID:15664398) Ensembl
Ensembl
MGI
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728
JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588904|PMID:15996652) Ensembl
Ensembl
MGI
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chr 2:236,161,340...236,168,386
Ensembl chr 2:236,165,236...236,168,386
JBrowse link
G GDF2 growth differentiation factor 2 involved_in IDA
IEA
(PMID:20406889) DFLAT
Ensembl
DFLAT
PMID:20406889 GO_REF:0000107 NCBI chr10:47,322,454...47,327,588
Ensembl chr10:47,322,454...47,327,588
JBrowse link
G GNA13 G protein subunit alpha 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583513|PMID:15919816) Ensembl
MGI
Ensembl
PMID:15919816 GO_REF:0000107 MGI:3583513 NCBI chr17:65,009,289...65,056,740
Ensembl chr17:65,009,289...65,056,740
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3574706|PMID:15689378) Ensembl
Ensembl
MGI
PMID:15689378 GO_REF:0000107 MGI:3574706 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within IMP (PMID:23688497) BHF-UCL
BHF-UCL
PMID:23688497 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3833040|PMID:19154719) Ensembl
Ensembl
MGI
PMID:19154719 GO_REF:0000107 MGI:3833040 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956
JBrowse link
G MIR15B microRNA 15b acts_upstream_of IMP (PMID:23688497) BHF-UCL PMID:23688497 NCBI chr 3:160,404,588...160,404,685
Ensembl chr 3:160,404,588...160,404,685
JBrowse link
G MIR16-1 microRNA 16-1 acts_upstream_of IDA (PMID:23083510) BHF-UCL PMID:23083510 NCBI chr13:50,048,973...50,049,061
Ensembl chr13:50,048,973...50,049,061
JBrowse link
G MIR16-2 microRNA 16-2 acts_upstream_of IDA (PMID:23083510) BHF-UCL PMID:23083510 NCBI chr 3:160,404,745...160,404,825
Ensembl chr 3:160,404,745...160,404,825
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2136698|PMID:11439183) Ensembl
Ensembl
MGI
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
G NOTCH4 notch receptor 4 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:32,194,843...32,224,067
Ensembl chr 6:32,194,843...32,224,067
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3833040|PMID:19154719)
GO_Central
Ensembl
GO_Central
MGI
PMID:19154719 PMID:21873635 GO_REF:0000107 MGI:3833040 NCBI chr 9:137,299,631...137,302,271
Ensembl chr 9:137,299,631...137,302,271
JBrowse link
G NRP1 neuropilin 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:24401374)
(MGI:3710026|PMID:17428830)
BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:17428830 PMID:24401374 GO_REF:0000024 GO_REF:0000107 MGI:3710026 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:2389284|PMID:12397115) MGI PMID:12397115 MGI:2389284 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
G PLXND1 plexin D1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3050159|PMID:15239958)
(MGI:5509072|PMID:23918385)
Ensembl
Ensembl
MGI
PMID:15239958 PMID:23918385 GO_REF:0000107 MGI:3050159 MGI:5509072 NCBI chr 3:129,555,214...129,606,676
Ensembl chr 3:129,555,214...129,606,676
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr 2:68,178,857...68,252,532
Ensembl chr 2:68,178,857...68,256,237
JBrowse link
G RBM15 RNA binding motif protein 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3833189|PMID:18981216) Ensembl
Ensembl
MGI
PMID:18981216 GO_REF:0000107 MGI:3833189 NCBI chr 1:110,339,377...110,346,677
Ensembl chr 1:110,338,506...110,346,681
JBrowse link
G SEMA3E semaphorin 3E involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:83,363,238...83,649,139
Ensembl chr 7:83,363,238...83,649,139
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chr 5:9,035,033...9,546,075
Ensembl chr 5:9,035,033...9,546,075
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3583396|PMID:15936751) UniProt
UniProt
Ensembl
MGI
PMID:15936751 GO_REF:0000024 GO_REF:0000107 MGI:3583396 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3811944|PMID:18804439) Ensembl
Ensembl
MGI
PMID:18804439 GO_REF:0000107 MGI:3811944 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G STK4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412133|PMID:19786569) Ensembl
Ensembl
MGI
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr20:44,966,512...45,080,021
Ensembl chr20:44,966,479...45,080,021
JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578574|PMID:15843414) Ensembl
Ensembl
MGI
PMID:15843414 GO_REF:0000107 MGI:3578574 NCBI chr 7:35,202,430...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3703113|PMID:17078885) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:17078885 GO_REF:0000024 GO_REF:0000107 MGI:3703113 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,601...30,694,142
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
IMP (PMID:23083510)
(PMID:23688497)
BHF-UCL
BHF-UCL
PMID:23083510 PMID:23688497 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:3848105 NCBI chr18:79,395,930...79,529,323
Ensembl chr18:79,395,856...79,529,325
JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:43,300,982...43,323,108
Ensembl chr 1:43,300,982...43,323,108
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3054694|PMID:15340078) Ensembl
Ensembl
MGI
PMID:15340078 GO_REF:0000107 MGI:3054694 NCBI chr10:101,354,048...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CCL11 C-C motif chemokine ligand 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640884|PMID:10804170) Ensembl
Ensembl
MGI
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr17:34,285,742...34,288,334
Ensembl chr17:34,285,742...34,288,334
JBrowse link
G CSF1 colony stimulating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640884|PMID:10804170) Ensembl
Ensembl
MGI
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1932625|PMID:11283268) Ensembl
Ensembl
MGI
PMID:11283268 GO_REF:0000107 MGI:1932625 NCBI chr 6:30,880,970...30,900,156
Ensembl chr 6:30,876,421...30,900,156
JBrowse link
G EPHA2 EPH receptor A2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:16,124,337...16,156,069
Ensembl chr 1:16,124,337...16,156,069
JBrowse link
G ETV4 ETS variant transcription factor 4 acts_upstream_of_or_within ISO (MGI:2667785|PMID:12871699)
(MGI:3828920|PMID:18977342)
MGI PMID:12871699 PMID:18977342 MGI:2667785 MGI:3828920 NCBI chr17:43,527,846...43,546,340
Ensembl chr17:43,527,844...43,579,620
JBrowse link
G KDM5B lysine demethylase 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5619178|PMID:24802759) Ensembl
Ensembl
MGI
PMID:24802759 GO_REF:0000107 MGI:5619178 NCBI chr 1:202,724,495...202,808,421
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3692480|PMID:16973609)
GO_Central
Ensembl
GO_Central
MGI
PMID:16973609 PMID:21873635 GO_REF:0000107 MGI:3692480 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275
JBrowse link
G LRP5L LDL receptor related protein 5 like involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr22:25,351,418...25,405,408
Ensembl chr22:25,351,418...25,405,377
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1355063|PMID:10742104) MGI
Ensembl
Ensembl
PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chr 5:174,724,582...174,730,896
Ensembl chr 5:174,724,582...174,730,896
JBrowse link
G PML PML nuclear body scaffold involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839212|PMID:19261859) Ensembl
Ensembl
MGI
PMID:19261859 GO_REF:0000107 MGI:3839212 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G SLC12A2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:2180693|PMID:8864124) MGI PMID:8864124 MGI:2180693 NCBI chr 5:128,083,766...128,189,677
Ensembl chr 5:128,083,766...128,189,677
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3589531|PMID:16007215) Ensembl
Ensembl
MGI
PMID:16007215 GO_REF:0000107 MGI:3589531 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3608166|PMID:16222716) Ensembl
Ensembl
MGI
PMID:16222716 GO_REF:0000107 MGI:3608166 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5504318|PMID:23661704) Ensembl
Ensembl
MGI
PMID:23661704 GO_REF:0000107 MGI:5504318 NCBI chr 5:5,140,330...5,320,304
Ensembl chr 5:5,140,330...5,320,304
JBrowse link
G AGT angiotensinogen NOT|acts_upstream_of_or_within ISO (MGI:77583|PMID:8675666)
(MGI:2655949|PMID:12657564)
MGI PMID:8675666 PMID:12657564 MGI:2655949 MGI:77583 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3036971|PMID:14699151)
(MGI:3768986|PMID:16672320)
Ensembl
Ensembl
MGI
PMID:14699151 PMID:16672320 GO_REF:0000107 MGI:3036971 MGI:3768986 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3583399|PMID:15925496) UniProt
Ensembl
UniProt
MGI
PMID:15925496 GO_REF:0000024 GO_REF:0000107 MGI:3583399 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
(PMID:12631064)
(MGI:3714585|PMID:17522159)
UniProt
UniProt
Ensembl
MGI
PMID:12631064 PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CD44 CD44 molecule (Indian blood group) acts_upstream_of_or_within ISO (MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:2449954 NCBI chr11:35,139,171...35,232,402
Ensembl chr11:35,138,882...35,232,402
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
NOT|involved_in
ISS
ISO
(MGI:3717986|PMID:17615577) UniProt
UniProt
UniProt
PMID:17615577 GO_REF:0000024 MGI:3717986 NCBI chr  X:72,301,646...72,307,157
Ensembl chr  X:72,301,638...72,307,187
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714576|PMID:17537789) Ensembl
Ensembl
MGI
PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3757813|PMID:17803964) Ensembl
Ensembl
MGI
PMID:17803964 GO_REF:0000107 MGI:3757813 NCBI chr 1:9,848,276...9,910,269
Ensembl chr 1:9,848,276...9,910,336
JBrowse link
G DCHS1 dachsous cadherin-related 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4939936|PMID:21303848) Ensembl
Ensembl
MGI
PMID:21303848 GO_REF:0000107 MGI:4939936 NCBI chr11:6,621,330...6,655,809
Ensembl chr11:6,621,330...6,655,809
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709697|PMID:17435047)
(MGI:3699022|PMID:17172448)
(MGI:3688770|PMID:16105026)
Ensembl
Ensembl
MGI
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 MGI:3688770 MGI:3699022 MGI:3709697 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:3686561 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662002|PMID:12783782) Ensembl
Ensembl
MGI
PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G FAT4 FAT atypical cadherin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4939936|PMID:21303848) Ensembl
Ensembl
MGI
PMID:21303848 GO_REF:0000107 MGI:4939936 NCBI chr 4:125,314,955...125,492,932
Ensembl chr 4:125,314,918...125,492,932
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in IDA (PMID:12631064) UniProt
UniProt
PMID:12631064 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,708...122,898,236
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603080|PMID:16049111) Ensembl
Ensembl
MGI
PMID:16049111 GO_REF:0000107 MGI:3603080 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675756|PMID:13678594) MGI
Ensembl
PMID:13678594 GO_REF:0000107 MGI:2675756 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2675756|PMID:13678594), (MGI:4949995|PMID:21281623) UniProt
Ensembl
UniProt
MGI
PMID:13678594 PMID:21281623 GO_REF:0000024 GO_REF:0000107 MGI:2675756 MGI:4949995 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611729|PMID:16396903) Ensembl
Ensembl
MGI
PMID:16396903 GO_REF:0000107 MGI:3611729 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583399|PMID:15925496) Ensembl
Ensembl
MGI
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr  X:133,535,745...133,985,594
Ensembl chr  X:133,535,745...133,987,100
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6094060|PMID:29100091) MGI
Ensembl
Ensembl
PMID:29100091 GO_REF:0000107 MGI:6094060 NCBI chr18:21,242,232...21,526,112
Ensembl chr18:21,242,232...21,526,112
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683817|PMID:14522971) Ensembl
Ensembl
MGI
PMID:14522971 GO_REF:0000107 MGI:2683817 NCBI chr20:23,361,127...23,373,062
Ensembl chr20:23,362,182...23,373,062
JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2135652|PMID:11493536) UniProt
UniProt
Ensembl
MGI
PMID:11493536 GO_REF:0000024 GO_REF:0000107 MGI:2135652 NCBI chr 7:27,181,157...27,185,232
Ensembl chr 7:27,181,157...27,185,232
JBrowse link
G HOXD11 homeobox D11 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2135652|PMID:11493536) UniProt
UniProt
MGI
PMID:11493536 GO_REF:0000024 MGI:2135652 NCBI chr 2:176,107,280...176,115,679
Ensembl chr 2:176,104,216...176,109,754
JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,494,032...13,601,929
Ensembl chr17:13,494,032...13,601,929
JBrowse link
G HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,301,081...14,349,404
Ensembl chr17:14,301,081...14,349,404
JBrowse link
G ILK integrin linked kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr11:6,603,774...6,610,870
Ensembl chr11:6,603,708...6,610,874
JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2678847|PMID:14568553) Ensembl
Ensembl
MGI
PMID:14568553 GO_REF:0000107 MGI:2678847 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7909549) Ensembl
Ensembl
UniProt
PMID:7909549 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:15754038)
(MGI:3714574|PMID:17537792)
BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:15754038 PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027
JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within
ISS
IEP
ISO
(PMID:1337742)
(MGI:3768986|PMID:16672320)
UniProt
UniProt
MGI
PMID:1337742 PMID:16672320 GO_REF:0000024 MGI:3768986 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PAX8 paired box 8 involved_in IEP (PMID:1337742) UniProt
UniProt
PMID:1337742 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2451200|PMID:12591246) Ensembl
Ensembl
MGI
PMID:12591246 GO_REF:0000107 MGI:2451200 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296
JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:2675756 NCBI chr14:74,941,830...74,955,764
Ensembl chr14:74,941,834...74,955,626
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEP (PMID:11891195) UniProt
UniProt
PMID:11891195 NCBI chr 4:88,007,635...88,077,777
Ensembl chr 4:88,007,635...88,077,777
JBrowse link
G PSPN persephin acts_upstream_of_or_within ISO (MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:1196665 NCBI chr19:6,375,148...6,375,933
Ensembl chr19:6,375,148...6,379,058
JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367286|PMID:19809516) Ensembl
Ensembl
MGI
PMID:19809516 GO_REF:0000107 MGI:4367286 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of
ISS
ISO
(MGI:5563280|PMID:24550112) UniProt
MGI
UniProt
PMID:24550112 GO_REF:0000024 MGI:5563280 NCBI chr16:51,135,982...51,152,334
Ensembl chr16:51,135,982...51,152,334
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3611729|PMID:16396903) UniProt
Ensembl
UniProt
MGI
PMID:16396903 GO_REF:0000024 GO_REF:0000107 MGI:3611729 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2662002|PMID:12783782) UniProt
UniProt
Ensembl
MGI
PMID:12783782 GO_REF:0000024 GO_REF:0000107 MGI:2662002 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583399|PMID:15925496) Ensembl
MGI
Ensembl
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8787755) Ensembl
Ensembl
UniProt
PMID:8787755 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TCF21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1347485|PMID:10572052)
(MGI:1202620|PMID:9507058)
BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:9507058 PMID:10572052 GO_REF:0000024 GO_REF:0000107 MGI:1202620 MGI:1347485 NCBI chr 6:133,889,113...133,895,537
Ensembl chr 6:133,889,113...133,895,553
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 RGD
MGI
PMID:10963667 RGD:2308864 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TMEM59L transmembrane protein 59 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,612,870...18,621,039
Ensembl chr19:18,607,430...18,621,039
JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2178881|PMID:11948913) Ensembl
Ensembl
MGI
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr 2:218,859,805...218,874,233
Ensembl chr 2:218,859,805...218,874,233
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
G WT1 WT1 transcription factor involved_in IGI (PMID:10101119) UniProt
UniProt
PMID:10101119 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
JBrowse link
branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO (MGI:3052392|PMID:15282149)
(MGI:2178150|PMID:11900463)
MGI PMID:11900463 PMID:15282149 MGI:2178150 MGI:3052392 NCBI chr 9:33,104,077...33,185,089
Ensembl chr 9:33,104,082...33,167,356
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IDA (PMID:10706139) UniProt
UniProt
PMID:10706139 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G CASR calcium sensing receptor involved_in ISO
IEA
positive regulation RGD
Ensembl
Ensembl
PMID:20117086 GO_REF:0000107 RGD:7206840 NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,668...122,291,629
JBrowse link
G CLIC4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3837628|PMID:19197003) Ensembl
Ensembl
MGI
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 1:24,745,447...24,844,321
Ensembl chr 1:24,745,382...24,844,321
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3617296|PMID:16452165) MGI PMID:16452165 MGI:3617296 NCBI chr14:95,086,228...95,158,010
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G EGF epidermal growth factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr 4:109,912,883...110,013,766
Ensembl chr 4:109,912,883...110,013,766
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IDA (PMID:17959718) UniProt
UniProt
PMID:17959718 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G GDF7 growth differentiation factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1934988|PMID:11356025) Ensembl
Ensembl
MGI
PMID:11356025 GO_REF:0000107 MGI:1934988 NCBI chr 2:20,667,144...20,679,243
Ensembl chr 2:20,667,144...20,679,243
JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1277743|PMID:9731531) UniProt
UniProt
Ensembl
Ensembl
MGI
PMID:9731531 GO_REF:0000024 GO_REF:0000107 MGI:1277743 NCBI chr 2:120,735,868...120,992,653
Ensembl chr 2:120,735,623...120,992,653
JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608164|PMID:16247775) MGI
Ensembl
PMID:16247775 GO_REF:0000107 MGI:3608164 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430439|PMID:20040500) MGI
Ensembl
Ensembl
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (MGI:3616136|PMID:15059953) MGI PMID:15059953 MGI:3616136 NCBI chr12:102,395,874...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3613102|PMID:16375885) MGI
Ensembl
PMID:16375885 GO_REF:0000107 MGI:3613102 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G LAMA5 laminin subunit alpha 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2678847|PMID:14568553) MGI
Ensembl
PMID:14568553 GO_REF:0000107 MGI:2678847 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IMP (PMID:16153003) UniProt
UniProt
PMID:16153003 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MGP matrix Gla protein ISO fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr12:14,880,864...14,885,854
Ensembl chr12:14,880,864...14,885,857
JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:58,205,441...58,219,255
Ensembl chr17:58,205,441...58,219,605
JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3527919|PMID:15572153) Ensembl
Ensembl
MGI
PMID:15572153 GO_REF:0000107 MGI:3527919 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,041
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3574742|PMID:15716345) MGI PMID:15716345 MGI:3574742 NCBI chr 2:15,940,550...15,947,004
Ensembl chr 2:15,940,550...15,947,007
JBrowse link
G NKX3-1 NK3 homeobox 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1891543|PMID:11002344) UniProt
Ensembl
UniProt
MGI
PMID:11002344 GO_REF:0000024 GO_REF:0000107 MGI:1891543 NCBI chr 8:23,678,693...23,682,938
Ensembl chr 8:23,678,697...23,682,938
JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3529381|PMID:15064243) Ensembl
Ensembl
MGI
PMID:15064243 GO_REF:0000107 MGI:3529381 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 involved_in IMP (PMID:20457839) UniProt
UniProt
PMID:20457839 NCBI chr11:77,322,017...77,530,009
Ensembl chr11:77,322,017...77,474,635
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IDA
IEA
(PMID:12482949) UniProt
Ensembl
UniProt
PMID:12482949 GO_REF:0000107 NCBI chr16:2,088,708...2,135,898
Ensembl chr16:2,088,708...2,135,898
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin acts_upstream_of_positive_effect
involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:4880601|PMID:20875407) UniProt
Ensembl
UniProt
UniProt
PMID:20875407 GO_REF:0000024 GO_REF:0000107 MGI:4880601 NCBI chr 6:51,615,299...52,087,615
Ensembl chr 6:51,615,299...52,087,613
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3039057|PMID:15042703) Ensembl
Ensembl
MGI
PMID:15042703 GO_REF:0000107 MGI:3039057 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PXN paxillin acts_upstream_of_or_within ISO (MGI:2680875|PMID:14636584) MGI PMID:14636584 MGI:2680875 NCBI chr12:120,210,447...120,265,730
Ensembl chr12:120,210,439...120,265,771
JBrowse link
G RASIP1 Ras interacting protein 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:48,720,585...48,740,610
Ensembl chr19:48,720,585...48,740,610
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chr 5:9,035,033...9,546,075
Ensembl chr 5:9,035,033...9,546,075
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1289788|PMID:9768363)
(MGI:3050270|PMID:15305287)
(MGI:3039063|PMID:15042696)
UniProt
Ensembl
UniProt
MGI
PMID:9768363 PMID:15042696 PMID:15305287 GO_REF:0000024 GO_REF:0000107 MGI:1289788 MGI:3039063 MGI:3050270 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IDA
IMP
(PMID:18345009)
(PMID:19005219)
UniProt
UniProt
PMID:18345009 PMID:19005219 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331548|PMID:10074434) MGI
Ensembl
PMID:10074434 GO_REF:0000107 MGI:1331548 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675515|PMID:12950082) MGI
Ensembl
Ensembl
PMID:12950082 GO_REF:0000107 MGI:2675515 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TMEM67 transmembrane protein 67 involved_in ISO (MGI:4441259|PMID:17185389) UniProt PMID:17185389 MGI:4441259 NCBI chr 8:93,754,844...93,832,653
Ensembl chr 8:93,754,844...93,819,234
JBrowse link
G VEGFA vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:3613102 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178881|PMID:11948913) MGI
Ensembl
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA (PMID:8674409) MGI
MGI
PMID:8674409 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3788965|PMID:18367557) Ensembl
Ensembl
MGI
PMID:18367557 GO_REF:0000107 MGI:3788965 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
Ensembl
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3688953|PMID:16989802) UniProt
UniProt
MGI
PMID:16989802 GO_REF:0000024 MGI:3688953 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709664|PMID:17473173) Ensembl
Ensembl
MGI
PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
Ensembl
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 4:123,396,795...123,403,760
Ensembl chr 4:123,396,795...123,403,760
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
Ensembl
MGI
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5586932|PMID:25043473) Ensembl
MGI
Ensembl
PMID:25043473 GO_REF:0000107 MGI:5586932 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IDA (PMID:9740653) MGI
MGI
PMID:9740653 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1277744|PMID:9731532) Ensembl
Ensembl
MGI
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO (MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:5300435 NCBI chr12:88,142,307...88,199,887
Ensembl chr12:88,142,296...88,199,887
JBrowse link
G TNC tenascin C ISO RGD PMID:16928692 RGD:4889612 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,257
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSH cathepsin H involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:78,921,058...78,945,046
Ensembl chr15:78,921,058...78,949,574
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703920|PMID:17369357) Ensembl
Ensembl
MGI
PMID:17369357 GO_REF:0000107 MGI:3703920 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:4422106 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777
JBrowse link
distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLHL3 kelch like family member 3 involved_in IMP (PMID:22406640), (PMID:23453970), (PMID:23576762) UniProt
UniProt
PMID:22406640 PMID:23453970 PMID:23576762 NCBI chr 5:137,617,500...137,736,089
Ensembl chr 5:137,617,500...137,736,089
JBrowse link
G WNK4 WNK lysine deficient protein kinase 4 involved_in IMP (PMID:23453970), (PMID:23576762) UniProt
UniProt
PMID:23453970 PMID:23576762 NCBI chr17:42,780,610...42,797,066
Ensembl chr17:42,780,610...42,797,066
JBrowse link
embryonic epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RET ret proto-oncogene involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3513229|PMID:15569713) Ensembl
Ensembl
MGI
PMID:15569713 GO_REF:0000107 MGI:3513229 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3513229|PMID:15569713) Ensembl
Ensembl
MGI
PMID:15569713 GO_REF:0000107 MGI:3513229 NCBI chr22:50,672,823...50,733,212
Ensembl chr22:50,674,415...50,733,212
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624584|PMID:16546160) Ensembl
Ensembl
MGI
PMID:16546160 GO_REF:0000107 MGI:3624584 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1927045|PMID:11076684) Ensembl
Ensembl
MGI
PMID:11076684 GO_REF:0000107 MGI:1927045 NCBI chr 5:154,474,972...154,478,227
Ensembl chr 5:154,474,972...154,478,227
JBrowse link
embryonic heart tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IMP (PMID:19506109) BHF-UCL
BHF-UCL
PMID:19506109 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISS
IEA
UniProt
Ensembl
CAFA
GO_REF:0000024 GO_REF:0000107 NCBI chr19:42,325,635...42,378,765
Ensembl chr19:42,325,609...42,378,769
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249
JBrowse link
G RYR2 ryanodine receptor 2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:237,042,184...237,833,988
Ensembl chr 1:237,042,184...237,833,988
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892
JBrowse link
G TBX20 T-box transcription factor 20 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:35,202,430...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
G TEAD1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chr11:12,674,421...12,944,737
Ensembl chr11:12,674,421...12,944,737
JBrowse link
G TEAD2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3773640|PMID:18332127) Ensembl
Ensembl
MGI
PMID:18332127 GO_REF:0000107 MGI:3773640 NCBI chr19:49,340,595...49,362,416
Ensembl chr19:49,340,595...49,362,457
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3773640|PMID:18332127) Ensembl
Ensembl
MGI
PMID:18332127 GO_REF:0000107 MGI:3773640 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424
JBrowse link
endothelial tube lumen extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHOA ras homolog family member A acts_upstream_of_or_within IGI (PMID:20208559) MGI
MGI
PMID:20208559 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998
JBrowse link
G STARD13 StAR related lipid transfer domain containing 13 acts_upstream_of_or_within IMP
IGI
(PMID:20208559) MGI
MGI
PMID:20208559 NCBI chr13:33,103,137...33,676,794
Ensembl chr13:33,103,137...33,350,630
JBrowse link
endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IMP (PMID:19592636) BHF-UCL
BHF-UCL
PMID:19592636 NCBI chr12:51,906,944...51,923,361
Ensembl chr12:51,906,908...51,923,361
JBrowse link
G BSG basigin (Ok blood group) involved_in IDA (PMID:19837976) UniProt
UniProt
PMID:19837976 NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,494
JBrowse link
G CCM2 CCM2 scaffold protein acts_upstream_of_or_within IMP (PMID:19151727) MGI
MGI
PMID:19151727 NCBI chr 7:44,999,746...45,076,470
Ensembl chr 7:44,999,475...45,076,469
JBrowse link
G CSNK2B casein kinase 2 beta involved_in IMP (PMID:19592636) BHF-UCL
BHF-UCL
PMID:19592636 NCBI chr 6:31,666,080...31,670,067
Ensembl chr 6:31,665,227...31,670,343
JBrowse link
G CTNNB1 catenin beta 1 involved_in IMP (PMID:20123964) BHF-UCL
BHF-UCL
PMID:20123964 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:24955809 GO_REF:0000107 RGD:11352686 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,119,177
JBrowse link
G KDR kinase insert domain receptor ISO RGD PMID:25942475 RGD:126925211 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G MIR21 microRNA 21 involved_in IMP (PMID:21347332) BHF-UCL PMID:21347332 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337
JBrowse link
G PRKD2 protein kinase D2 involved_in TAS (PMID:21488147) BHF-UCL
BHF-UCL
PMID:21488147 NCBI chr19:46,674,316...46,717,114
Ensembl chr19:46,674,275...46,717,127
JBrowse link
G RHOB ras homolog family member B involved_in IMP (PMID:21347332) BHF-UCL
BHF-UCL
PMID:21347332 NCBI chr 2:20,447,074...20,449,440
Ensembl chr 2:20,447,074...20,449,440
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703920|PMID:17369357) Ensembl
Ensembl
MGI
PMID:17369357 GO_REF:0000107 MGI:3703920 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G ESR1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3629536|PMID:12021201) Ensembl
Ensembl
MGI
PMID:12021201 GO_REF:0000107 MGI:3629536 NCBI chr 6:151,656,672...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:4422106 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761053|PMID:17898001) Ensembl
Ensembl
MGI
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
epithelial cell proliferation involved in renal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5581372|PMID:24680895) Ensembl
Ensembl
MGI
PMID:24680895 GO_REF:0000107 MGI:5581372 NCBI chr11:27,365,961...27,472,790
Ensembl chr11:27,365,961...27,472,790
JBrowse link
G LGR5 leucine rich repeat containing G protein-coupled receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5581372|PMID:24680895) Ensembl
MGI
Ensembl
PMID:24680895 GO_REF:0000107 MGI:5581372 NCBI chr12:71,439,129...71,586,310
Ensembl chr12:71,439,798...71,586,310
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257
JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 8:124,550,784...124,728,473
Ensembl chr 8:124,550,784...124,728,473
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO
IDA
(PMID:8674409) RGD
MGI
MGI
PMID:8674409 PMID:8769111 RGD:2306315 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of
acts_upstream_of_or_within
IEA
ISO
(MGI:3801531|PMID:18533146)
(MGI:3773938|PMID:18231602)
Ensembl
MGI
Ensembl
PMID:18231602 PMID:18533146 GO_REF:0000107 MGI:3773938 MGI:3801531 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CTSD cathepsin D NOT|involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr11:1,752,755...1,763,927
Ensembl chr11:1,752,752...1,764,573
JBrowse link
G CTSL cathepsin L NOT|involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G CTSZ cathepsin Z acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17500053) UniProt
Ensembl
Ensembl
PMID:17500053 GO_REF:0000107 NCBI chr20:58,995,185...59,007,254
Ensembl chr20:58,985,686...59,008,238
JBrowse link
G DAG1 dystroglycan 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2156962|PMID:11798066) Ensembl
Ensembl
MGI
PMID:11798066 GO_REF:0000107 MGI:2156962 NCBI chr 3:49,468,948...49,535,615
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5487693|PMID:23466739) Ensembl
Ensembl
MGI
PMID:23466739 GO_REF:0000107 MGI:5487693 NCBI chr10:77,790,791...77,940,736
Ensembl chr10:77,790,791...77,926,755
JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO (MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:5699497 NCBI chr 8:94,641,174...94,707,466
Ensembl chr 8:94,641,074...94,707,466
JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5699497|PMID:26371508) Ensembl
Ensembl
MGI
PMID:26371508 GO_REF:0000107 MGI:5699497 NCBI chr16:68,229,033...68,236,127
Ensembl chr16:68,229,033...68,238,102
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5912649|PMID:28859094) Ensembl
Ensembl
MGI
PMID:28859094 GO_REF:0000107 MGI:5912649 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826
JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1309706|PMID:9784490)
(MGI:3578606|PMID:15800000)
(MGI:3716020|PMID:17560563)
(MGI:1101385|PMID:9428423), (MGI:3609523|PMID:16169547), (MGI:3613102|PMID:16375885)
(MGI:1327513|PMID:9916808)
MGI
Ensembl
PMID:9428423 PMID:9784490 PMID:9916808 PMID:15800000 PMID:16169547 More... GO_REF:0000107 MGI:1101385 MGI:1309706 MGI:1327513 MGI:3578606 MGI:3609523 MGI:3613102 MGI:3716020 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:5523405 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3579763|PMID:15668254) Ensembl
Ensembl
MGI
PMID:15668254 GO_REF:0000107 MGI:3579763 NCBI chr14:37,589,552...37,595,249
Ensembl chr14:37,589,552...37,596,059
JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:3579763 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,580,998...22,585,455
JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2135612|PMID:11493558) Ensembl
Ensembl
MGI
PMID:11493558 GO_REF:0000107 MGI:2135612 NCBI chr16:86,510,527...86,515,422
Ensembl chr16:86,510,527...86,515,422
JBrowse link
G HHIP hedgehog interacting protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450020|PMID:12569124) Ensembl
Ensembl
MGI
PMID:12569124 GO_REF:0000107 MGI:2450020 NCBI chr 4:144,646,156...144,745,271
Ensembl chr 4:144,646,156...144,745,271
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:5638831|PMID:24661562) MGI PMID:24661562 MGI:5638831 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1195049|PMID:9441679) Ensembl
Ensembl
MGI
PMID:9441679 GO_REF:0000107 MGI:1195049 NCBI chr 7:27,141,052...27,143,681
Ensembl chr 7:27,141,052...27,143,681
JBrowse link
G KRAS KRAS proto-oncogene, GTPase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5523405|PMID:24058167) Ensembl
Ensembl
MGI
PMID:24058167 GO_REF:0000107 MGI:5523405 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2156962|PMID:11798066), (MGI:80991|PMID:1907584) Ensembl
Ensembl
MGI
PMID:1907584 PMID:11798066 GO_REF:0000107 MGI:2156962 MGI:80991 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in IEP (PMID:8675988) UniProt
UniProt
PMID:8675988 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3774879|PMID:18256198) Ensembl
Ensembl
MGI
PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chr 8:107,899,316...108,083,620
Ensembl chr 8:107,899,316...108,083,642
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1277744|PMID:9731532), (MGI:1346236|PMID:10500184) RGD
Ensembl
MGI
PMID:8769111 PMID:9731532 PMID:10500184 GO_REF:0000107 MGI:1277744 MGI:1346236 RGD:2306315 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3795352|PMID:18374910) MGI PMID:18374910 MGI:3795352 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5523405|PMID:24058167) Ensembl
Ensembl
MGI
PMID:24058167 GO_REF:0000107 MGI:5523405 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PODXL podocalyxin like involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 7:131,500,271...131,556,628
Ensembl chr 7:131,500,262...131,558,217
JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTHRC1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3814781|PMID:18606138) Ensembl
Ensembl
MGI
PMID:18606138 GO_REF:0000107 MGI:3814781 NCBI chr 8:103,371,538...103,382,989
Ensembl chr 8:103,371,538...103,382,989
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3814781|PMID:18606138) MGI PMID:18606138 MGI:3814781 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:135,283,532...135,497,740
Ensembl chr 6:135,283,407...135,498,434
JBrowse link
G APLNR apelin receptor involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr11:57,233,591...57,237,250
Ensembl chr11:57,233,577...57,237,250
JBrowse link
G ARL13B ADP ribosylation factor like GTPase 13B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5430243|PMID:22554696) MGI
Ensembl
Ensembl
PMID:22554696 GO_REF:0000107 MGI:5430243 NCBI chr 3:93,980,155...94,055,678
Ensembl chr 3:93,980,139...94,055,678
JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:93,934,166...93,976,570
Ensembl chr14:93,934,166...93,976,739
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr15:72,686,207...72,738,473
Ensembl chr15:72,686,179...72,738,475
JBrowse link
G BBS5 Bardet-Biedl syndrome 5 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 2:169,479,494...169,506,655
Ensembl chr 2:169,479,480...169,506,655
JBrowse link
G BBS7 Bardet-Biedl syndrome 7 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 4:121,824,329...121,870,474
Ensembl chr 4:121,824,329...121,870,487
JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3821640|PMID:19004860) Ensembl
Ensembl
MGI
PMID:19004860 GO_REF:0000107 MGI:3821640 NCBI chr11:74,012,718...74,171,002
Ensembl chr11:74,012,718...74,171,210
JBrowse link
G CCDC103 coiled-coil domain containing 103 involved_in IMP (PMID:22581229) BHF-UCL
BHF-UCL
PMID:22581229 NCBI chr17:44,899,729...44,905,390
Ensembl chr17:44,899,142...44,905,390
JBrowse link
G CCDC39 coiled-coil domain containing 39 involved_in IMP (PMID:22693285) BHF-UCL
BHF-UCL
PMID:22693285 NCBI chr 3:180,614,008...180,679,489
Ensembl chr 3:180,602,858...180,684,942
JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IBA
IMP
(PMID:21873635)
(PMID:22693285)
GO_Central
GO_Central
BHF-UCL
BHF-UCL
PMID:21873635 PMID:22693285 NCBI chr17:80,036,642...80,100,613
Ensembl chr17:80,036,632...80,100,613
JBrowse link
G CFC1B cripto, FRL-1, cryptic family 1B acts_upstream_of_or_within ISO (MGI:1346729|PMID:10521397) MGI PMID:10521397 MGI:1346729 NCBI chr 2:130,521,222...130,528,603
Ensembl chr 2:130,521,197...130,528,604
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3574743|PMID:15750185) Ensembl
Ensembl
MGI
PMID:15750185 GO_REF:0000107 MGI:3574743 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5509110|PMID:23742838) MGI
Ensembl
PMID:23742838 GO_REF:0000107 MGI:5509110 NCBI chr16:3,495,427...3,539,048
Ensembl chr16:3,500,976...3,539,048
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:170,282,206...170,291,078
Ensembl chr 6:170,282,206...170,306,565
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IMP (PMID:19944400), (PMID:19944405) BHF-UCL
BHF-UCL
PMID:19944400 PMID:19944405 NCBI chr16:84,145,308...84,177,920
Ensembl chr16:84,145,287...84,178,767
JBrowse link
G ENG endoglin involved_in ISS
IEA
(PMID:8194490) BHF-UCL
BHF-UCL
Ensembl
PMID:8194490 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:127,815,012...127,854,773
Ensembl chr 9:127,815,013...127,854,658
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1340887|PMID:10411502) Ensembl
Ensembl
MGI
PMID:10411502 GO_REF:0000107 MGI:1340887 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FOLR1 folate receptor alpha involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323
JBrowse link
G FOXH1 forkhead box H1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:144,473,412...144,475,849
Ensembl chr 8:144,473,412...144,475,849
JBrowse link
G FOXN4 forkhead box N4 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr12:109,277,978...109,309,284
Ensembl chr12:109,277,978...109,309,284
JBrowse link
G GATA4 GATA binding protein 4 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 8:11,676,935...11,760,002
Ensembl chr 8:11,676,959...11,760,002
JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1201220|PMID:9486664) MGI
Ensembl
PMID:9486664 GO_REF:0000107 MGI:1201220 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1197800|PMID:9500551) BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:9500551 GO_REF:0000024 GO_REF:0000107 MGI:1197800 NCBI chr 5:154,474,972...154,478,227
Ensembl chr 5:154,474,972...154,478,227
JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:892134|PMID:9171826) Ensembl
Ensembl
MGI
PMID:9171826 GO_REF:0000107 MGI:892134 NCBI chr 4:173,526,091...173,530,229
Ensembl chr 4:173,524,969...173,530,229
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3607736|PMID:14659802) Ensembl
Ensembl
MGI
PMID:14659802 GO_REF:0000107 MGI:3607736 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828200|PMID:18930042) Ensembl
Ensembl
MGI
PMID:18930042 GO_REF:0000107 MGI:3828200 NCBI chr 2:27,444,377...27,489,743
Ensembl chr 2:27,444,377...27,489,805
JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3579954|PMID:15930098) Ensembl
Ensembl
MGI
PMID:15930098 GO_REF:0000107 MGI:3579954 NCBI chr20:43,590,937...43,647,299
Ensembl chr20:43,590,937...43,647,299
JBrowse link
G IFT57 intraflagellar transport 57 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703110|PMID:17027958) Ensembl
Ensembl
MGI
PMID:17027958 GO_REF:0000107 MGI:3703110 NCBI chr 3:108,160,812...108,222,424
Ensembl chr 3:108,160,812...108,222,435
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082
JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (MGI:1337724|PMID:10330409) MGI PMID:10330409 MGI:1337724 NCBI chr 5:132,688,812...132,737,546
Ensembl chr 5:132,692,628...132,737,638
JBrowse link
G LBX1 ladybird homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3628723|PMID:12522123) Ensembl
Ensembl
MGI
PMID:12522123 GO_REF:0000107 MGI:3628723 NCBI chr10:101,226,994...101,229,463
Ensembl chr10:101,226,994...101,229,463
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249
JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603078|PMID:16000382) Ensembl
Ensembl
MGI
PMID:16000382 GO_REF:0000107 MGI:3603078 NCBI chr18:21,704,916...21,870,953
Ensembl chr18:21,704,957...21,870,953
JBrowse link
G MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr11:12,110,590...12,362,140
Ensembl chr11:12,094,008...12,359,144
JBrowse link
G MKKS MKKS centrosomal shuttling protein involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr20:10,401,009...10,434,222
Ensembl chr20:10,401,009...10,434,222
Ensembl chr20:10,401,009...10,434,222
Ensembl chr20:10,401,009...10,434,222
JBrowse link
G NDRG4 NDRG family member 4 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr16:58,463,715...58,515,387
Ensembl chr16:58,462,846...58,513,628
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:8900537)
(MGI:74918|PMID:7628699), (MGI:892786|PMID:9192865)
(MGI:3773736|PMID:16510504)
BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:7628699 PMID:8900537 PMID:9192865 PMID:16510504 GO_REF:0000107 MGI:3773736 MGI:74918 MGI:892786 NCBI chr 5:173,232,109...173,235,206
Ensembl chr 5:173,232,109...173,235,311
JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624254|PMID:16496285) Ensembl
Ensembl
MGI
PMID:16496285 GO_REF:0000107 MGI:3624254 NCBI chr10:70,431,936...70,447,951
Ensembl chr10:70,431,936...70,447,951
JBrowse link
G NOTCH1 notch receptor 1 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G NOTCH2 notch receptor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G NOTO notochord homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5646191|PMID:17884984) Ensembl
Ensembl
MGI
PMID:17884984 GO_REF:0000107 MGI:5646191 NCBI chr 2:73,202,574...73,212,513
Ensembl chr 2:73,202,574...73,212,513
JBrowse link
G NPHP3 nephrocystin 3 involved_in IMP (PMID:18371931), (PMID:20007846) BHF-UCL
BHF-UCL
PMID:18371931 PMID:20007846 NCBI chr 3:132,680,609...132,722,409
Ensembl chr 3:132,680,609...132,722,432
JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3776202|PMID:17573777) Ensembl
Ensembl
MGI
PMID:17573777 GO_REF:0000107 MGI:3776202 NCBI chr20:18,024,152...18,059,188
Ensembl chr20:17,956,979...18,059,188
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IMP (PMID:21719175) BHF-UCL
BHF-UCL
PMID:21719175 NCBI chr 4:88,007,635...88,077,777
Ensembl chr 4:88,007,635...88,077,777
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1347695|PMID:10557208) Ensembl
Ensembl
MGI
PMID:10557208 GO_REF:0000107 MGI:1347695 NCBI chr14:73,136,417...73,223,691
Ensembl chr14:73,136,418...73,223,691
JBrowse link
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr13:49,444,274...49,495,003
Ensembl chr13:49,444,274...49,495,003
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1340887|PMID:10411502), (MGI:1346236|PMID:10500184) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:10411502 PMID:10500184 GO_REF:0000024 GO_REF:0000107 MGI:1340887 MGI:1346236 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3618021|PMID:15183723) Ensembl
Ensembl
MGI
PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173
JBrowse link
G SMO smoothened, frizzled class receptor involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:129,188,633...129,213,545
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3716256|PMID:17610846) UniProt
Ensembl
UniProt
MGI
PMID:17610846 GO_REF:0000024 GO_REF:0000107 MGI:3716256 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892
JBrowse link
G SOX18 SRY-box transcription factor 18 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr20:64,047,582...64,049,639
Ensembl chr20:64,047,582...64,049,639
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3603734|PMID:15929941) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:15929941 GO_REF:0000024 GO_REF:0000107 MGI:3603734 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G STIL STIL centriolar assembly protein involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1339521|PMID:10385121) BHF-UCL
BHF-UCL
MGI
PMID:10385121 GO_REF:0000024 MGI:1339521 NCBI chr 1:47,250,139...47,314,896
Ensembl chr 1:47,250,139...47,314,892
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604917|PMID:16155214) Ensembl
Ensembl
MGI
PMID:16155214 GO_REF:0000107 MGI:3604917 NCBI chr10:102,502,819...102,633,535
Ensembl chr10:102,503,972...102,633,535
JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within
ISS
IEA
IBA
ISO
(PMID:21873635)
(MGI:3578601|PMID:15843407)
(MGI:3579960|PMID:15901664)
BHF-UCL
Ensembl
GO_Central
BHF-UCL
MGI
GO_Central
PMID:15843407 PMID:15901664 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3578601 MGI:3579960 NCBI chr 7:35,202,430...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:4412356|PMID:18723448)
(MGI:3769096|PMID:17460765)
GO_Central
Ensembl
GO_Central
MGI
PMID:17460765 PMID:18723448 PMID:21873635 GO_REF:0000107 MGI:3769096 MGI:4412356 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
G TBX6 T-box transcription factor 6 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:30,085,793...30,091,924
Ensembl chr16:30,085,793...30,091,924
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,601...30,694,142
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4453264|PMID:20178780) Ensembl
MGI
Ensembl
PMID:20178780 GO_REF:0000107 MGI:4453264 NCBI chr12:123,584,552...123,598,582
Ensembl chr12:123,584,533...123,598,582
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611726|PMID:16291790) Ensembl
Ensembl
MGI
PMID:16291790 GO_REF:0000107 MGI:3611726 NCBI chr 1:228,006,998...228,061,271
Ensembl chr 1:228,006,998...228,061,271
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4413372|PMID:19795512) Ensembl
Ensembl
MGI
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
(PMID:9354794)
(MGI:3056222|PMID:15384171)
(MGI:3624254|PMID:16496285)
BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:9354794 PMID:15384171 PMID:16496285 GO_REF:0000107 MGI:3056222 MGI:3624254 NCBI chr  X:137,566,127...137,577,691
Ensembl chr  X:137,566,127...137,577,691
JBrowse link
initiation of neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM2B lysine demethylase 2B involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr12:121,408,461...121,582,279
Ensembl chr12:121,429,096...121,581,023
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within
involved_in
ISS
IEA
UniProt
Ensembl
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683859|PMID:14676301) Ensembl
Ensembl
MGI
PMID:14676301 GO_REF:0000107 MGI:2683859 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761053|PMID:17898001) Ensembl
Ensembl
MGI
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4361775|PMID:19805295)
(MGI:4360856|PMID:19686689)
Ensembl
Ensembl
MGI
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
mammary duct terminal end bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL11 C-C motif chemokine ligand 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640884|PMID:10804170) Ensembl
Ensembl
MGI
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr17:34,285,742...34,288,334
Ensembl chr17:34,285,742...34,288,334
JBrowse link
G CSF1 colony stimulating factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640884|PMID:10804170) Ensembl
Ensembl
MGI
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G KDM5B lysine demethylase 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5619178|PMID:24802759) Ensembl
Ensembl
MGI
PMID:24802759 GO_REF:0000107 MGI:5619178 NCBI chr 1:202,724,495...202,808,421
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G MST1 macrophage stimulating 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5614192|PMID:25049204) Ensembl
Ensembl
MGI
PMID:25049204 GO_REF:0000107 MGI:5614192 NCBI chr 3:49,683,947...49,689,474
Ensembl chr 3:49,683,947...49,689,501
JBrowse link
G ROBO1 roundabout guidance receptor 1 acts_upstream_of_or_within ISO (MGI:3617129|PMID:16439476) MGI PMID:16439476 MGI:3617129 NCBI chr 3:78,597,239...79,767,998
Ensembl chr 3:78,597,239...79,767,998
JBrowse link
G SLC12A2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:2180453|PMID:12040017) MGI PMID:12040017 MGI:2180453 NCBI chr 5:128,083,766...128,189,677
Ensembl chr 5:128,083,766...128,189,677
JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within ISO (MGI:3617129|PMID:16439476) MGI PMID:16439476 MGI:3617129 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSMD1 CUB and Sushi multiple domains 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6369467|PMID:31604923) Ensembl
Ensembl
MGI
PMID:31604923 GO_REF:0000107 MGI:6369467 NCBI chr 8:2,935,361...4,994,914
Ensembl chr 8:2,935,353...4,994,972
JBrowse link
G ESR1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1926565|PMID:10919287) Ensembl
Ensembl
MGI
PMID:10919287 GO_REF:0000107 MGI:1926565 NCBI chr 6:151,656,672...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G VDR vitamin D receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3051725|PMID:15178742) Ensembl
Ensembl
MGI
PMID:15178742 GO_REF:0000107 MGI:3051725 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048
JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1336843|PMID:10331984), (MGI:3703920|PMID:17369357) Ensembl
Ensembl
MGI
PMID:10331984 PMID:17369357 GO_REF:0000107 MGI:1336843 MGI:3703920 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (MGI:1859522|PMID:11015591) MGI PMID:11015591 MGI:1859522 NCBI chr20:47,501,887...47,656,872
Ensembl chr20:47,501,887...47,656,877
JBrowse link
G PHB2 prohibitin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3695669|PMID:17065319) Ensembl
Ensembl
MGI
PMID:17065319 GO_REF:0000107 MGI:3695669 NCBI chr12:6,965,327...6,970,753
Ensembl chr12:6,965,327...6,970,780
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3814777|PMID:18614704) Ensembl
Ensembl
MGI
PMID:18614704 GO_REF:0000107 MGI:3814777 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761053|PMID:17898001) Ensembl
Ensembl
MGI
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
mammary gland bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTHLH parathyroid hormone like hormone acts_upstream_of_or_within ISO (MGI:1203302|PMID:9477327) MGI PMID:9477327 MGI:1203302 NCBI chr12:27,958,084...27,972,733
Ensembl chr12:27,958,084...27,972,733
JBrowse link
mammary gland bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155478|PMID:11782400) Ensembl
Ensembl
MGI
PMID:11782400 GO_REF:0000107 MGI:2155478 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2155478|PMID:11782400) UniProt
UniProt
MGI
PMID:11782400 GO_REF:0000024 MGI:2155478 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
mammary gland bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOSTDC1 sclerostin domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5319554|PMID:22509524) Ensembl
Ensembl
MGI
PMID:22509524 GO_REF:0000107 MGI:5319554 NCBI chr 7:16,461,481...16,465,738
Ensembl chr 7:16,461,481...16,530,580
JBrowse link
mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1R colony stimulating factor 1 receptor involved_in TAS (PMID:15117969) UniProt
UniProt
PMID:15117969 NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2151643|PMID:11783999) Ensembl
Ensembl
MGI
PMID:11783999 GO_REF:0000107 MGI:2151643 NCBI chr 2:120,735,868...120,992,653
Ensembl chr 2:120,735,623...120,992,653
JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3849913|PMID:19503830) MGI
Ensembl
PMID:19503830 GO_REF:0000107 MGI:3849913 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3758540|PMID:12198239) MGI
Ensembl
PMID:12198239 GO_REF:0000107 MGI:3758540 NCBI chr 5:143,277,931...143,435,512
Ensembl chr 5:143,277,931...143,435,512
JBrowse link
G NTN1 netrin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3617129|PMID:16439476) Ensembl
Ensembl
MGI
PMID:16439476 GO_REF:0000107 MGI:3617129 NCBI chr17:9,003,087...9,244,000
Ensembl chr17:9,021,510...9,244,000
JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1346456|PMID:10529434) Ensembl
Ensembl
MGI
PMID:10529434 GO_REF:0000107 MGI:1346456 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G SCRIB scribble planar cell polarity protein involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773
JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within ISO (MGI:3617129|PMID:16439476) MGI PMID:16439476 MGI:3617129 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430439|PMID:20040500) MGI
Ensembl
Ensembl
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G MIR216A microRNA 216a involved_in ISO (MGI:6359623|PMID:31367007) MGI PMID:31367007 MGI:6359623 NCBI chr 2:55,988,950...55,989,059
Ensembl chr 2:55,988,950...55,989,059
JBrowse link
G MIR216B microRNA 216b involved_in ISO (MGI:6359623|PMID:31367007) MGI PMID:31367007 MGI:6359623 NCBI chr 2:56,000,714...56,000,795
Ensembl chr 2:56,000,714...56,000,795
JBrowse link
G MIR217 microRNA 217 involved_in ISO (MGI:6359623|PMID:31367007) MGI PMID:31367007 MGI:6359623 NCBI chr 2:55,982,967...55,983,076
Ensembl chr 2:55,982,967...55,983,076
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
mesonephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1931343|PMID:11180950) UniProt
UniProt
Ensembl
MGI
PMID:11180950 GO_REF:0000024 GO_REF:0000107 MGI:1931343 NCBI chr  X:133,535,745...133,985,594
Ensembl chr  X:133,535,745...133,987,100
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:19,344,874...19,358,623
Ensembl chr 2:19,351,485...19,358,623
JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G SIX1 SIX homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IEP (PMID:11891195) UniProt
UniProt
PMID:11891195 NCBI chr16:2,088,708...2,135,898
Ensembl chr16:2,088,708...2,135,898
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PAX8 paired box 8 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:4939090|PMID:21212101) UniProt
Ensembl
UniProt
MGI
PMID:21212101 GO_REF:0000024 GO_REF:0000107 MGI:4939090 NCBI chr16:981,770...986,979
Ensembl chr16:981,770...986,979
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:4939090|PMID:21212101) UniProt
UniProt
Ensembl
MGI
PMID:21212101 GO_REF:0000024 GO_REF:0000107 MGI:4939090 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15465493) Ensembl
Ensembl
UniProt
PMID:15465493 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15465493) Ensembl
Ensembl
UniProt
PMID:15465493 GO_REF:0000107 NCBI chr 1:2,528,745...2,530,263
Ensembl chr 1:2,528,745...2,530,263
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:27,365,961...27,472,790
Ensembl chr11:27,365,961...27,472,790
JBrowse link
metanephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4950307|PMID:21350016) Ensembl
Ensembl
MGI
PMID:21350016 GO_REF:0000107 MGI:4950307 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4950307|PMID:21350016) Ensembl
Ensembl
MGI
PMID:21350016 GO_REF:0000107 MGI:4950307 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
metanephric tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCR2 C-X-C motif chemokine receptor 2 involved_in ISO
IEA
RGD
Ensembl
PMID:17634442 GO_REF:0000107 RGD:7257700 NCBI chr 2:218,125,294...218,137,251
Ensembl chr 2:218,125,289...218,137,251
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IDA (PMID:10706139), (PMID:17118062) UniProt
UniProt
PMID:10706139 PMID:17118062 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNF tumor necrosis factor involved_in IDA (PMID:17350185) UniProt
UniProt
PMID:17350185 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
(PMID:12141440), (PMID:17118062)
(MGI:4949995|PMID:21281623)
UniProt
Ensembl
UniProt
MGI
PMID:12141440 PMID:17118062 PMID:21281623 GO_REF:0000107 MGI:4949995 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:58,575,433...58,577,252
Ensembl chr 1:58,575,433...58,577,252
JBrowse link
negative regulation of endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR21 microRNA 21 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198
JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX2 T-box transcription factor 2 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
nephric duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198
JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430449|PMID:19913010) MGI
Ensembl
PMID:19913010 GO_REF:0000107 MGI:4430449 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G PAX2 paired box 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
nephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EFNB2 ephrin B2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5604037|PMID:25139858) MGI
Ensembl
Ensembl
PMID:25139858 GO_REF:0000107 MGI:5604037 NCBI chr13:106,489,745...106,535,662
Ensembl chr13:106,489,745...106,535,662
JBrowse link
G EPHA4 EPH receptor A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5604037|PMID:25139858) Ensembl
Ensembl
MGI
PMID:25139858 GO_REF:0000107 MGI:5604037 NCBI chr 2:221,418,027...221,574,202
Ensembl chr 2:221,418,027...221,574,202
JBrowse link
G EPHA7 EPH receptor A7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5604037|PMID:25139858) Ensembl
Ensembl
MGI
PMID:25139858 GO_REF:0000107 MGI:5604037 NCBI chr 6:93,240,020...93,419,559
Ensembl chr 6:93,240,020...93,419,687
JBrowse link
G GATA3 GATA binding protein 3 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714576|PMID:17537789) Ensembl
Ensembl
MGI
PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2178881|PMID:11948913) Ensembl
Ensembl
MGI
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr 2:218,859,805...218,874,233
Ensembl chr 2:218,859,805...218,874,233
JBrowse link
nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4353952|PMID:19543268) Ensembl
MGI
PMID:19543268 GO_REF:0000107 MGI:4353952 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
neural fold bending term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LUZP1 leucine zipper protein 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3818102|PMID:18801334)
GO_Central
Ensembl
GO_Central
MGI
PMID:18801334 PMID:21873635 GO_REF:0000107 MGI:3818102 NCBI chr 1:23,083,642...23,178,122
Ensembl chr 1:23,084,030...23,177,808
JBrowse link
neural fold elevation formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP5 bone morphogenetic protein 5 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:55,753,653...55,875,590
Ensembl chr 6:55,753,653...55,875,590
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1337194|PMID:10328919) Ensembl
Ensembl
MGI
PMID:10328919 GO_REF:0000107 MGI:1337194 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259
JBrowse link
neural fold formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CECR2 CECR2 histone acetyl-lysine reader involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4880797|PMID:21246654) Ensembl
Ensembl
MGI
PMID:21246654 GO_REF:0000107 MGI:4880797 NCBI chr22:17,359,949...17,558,151
Ensembl chr22:17,359,949...17,558,151
JBrowse link
G CFL1 cofilin 1 acts_upstream_of_or_within ISO (MGI:3530675|PMID:15649475) MGI PMID:15649475 MGI:3530675 NCBI chr11:65,854,673...65,858,180
Ensembl chr11:65,823,022...65,862,026
JBrowse link
G GATAD2A GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (MGI:3762244|PMID:17565372) MGI PMID:17565372 MGI:3762244 NCBI chr19:19,385,843...19,508,932
Ensembl chr19:19,385,826...19,508,932
JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155575|PMID:11311163) Ensembl
Ensembl
MGI
PMID:11311163 GO_REF:0000107 MGI:2155575 NCBI chr10:70,431,936...70,447,951
Ensembl chr10:70,431,936...70,447,951
JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3618450|PMID:16423343) Ensembl
Ensembl
MGI
PMID:16423343 GO_REF:0000107 MGI:3618450 NCBI chr20:18,024,152...18,059,188
Ensembl chr20:17,956,979...18,059,188
JBrowse link
neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1327082|PMID:9883720) Ensembl
Ensembl
MGI
PMID:9883720 GO_REF:0000107 MGI:1327082 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,016...130,887,675
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:1327082|PMID:9883720) MGI PMID:9883720 MGI:1327082 NCBI chr 1:179,099,330...179,229,677
Ensembl chr 1:179,099,330...179,229,684
JBrowse link
G ADM adrenomedullin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3689296|PMID:16981008) Ensembl
Ensembl
MGI
PMID:16981008 GO_REF:0000107 MGI:3689296 NCBI chr11:10,305,073...10,307,397
Ensembl chr11:10,305,073...10,307,397
JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (MGI:81193|PMID:8673125) MGI PMID:8673125 MGI:81193 NCBI chr12:85,280,220...85,301,784
Ensembl chr12:85,280,220...85,301,784
JBrowse link
G APAF1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2149166|PMID:11504943), (MGI:893797|PMID:9216040) MGI
Ensembl
Ensembl
PMID:9216040 PMID:11504943 GO_REF:0000107 MGI:2149166 MGI:893797 NCBI chr12:98,645,290...98,735,433
Ensembl chr12:98,645,290...98,735,433
JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1926242|PMID:11044403) Ensembl
Ensembl
MGI
PMID:11044403 GO_REF:0000107 MGI:1926242 NCBI chr19:46,860,997...47,005,077
Ensembl chr19:46,860,997...47,005,077
JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:5466629|PMID:23129809) MGI PMID:23129809 MGI:5466629 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3607949|PMID:16170314) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:16170314 GO_REF:0000024 GO_REF:0000107 MGI:3607949 NCBI chr15:72,686,207...72,738,473
Ensembl chr15:72,686,179...72,738,475
JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in ISS
IEA
(PMID:11163238) UniProt
Ensembl
UniProt
PMID:11163238 GO_REF:0000107 NCBI chr 1:85,265,776...85,276,632
Ensembl chr 1:85,265,776...85,276,632
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4429763|PMID:19850029) Ensembl
Ensembl
MGI
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BRD2 bromodomain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6120662|PMID:19362612) Ensembl
Ensembl
MGI
PMID:19362612 GO_REF:0000107 MGI:6120662 NCBI chr 6:32,968,594...32,981,505
Ensembl chr 6:32,968,594...32,981,505
JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5696765|PMID:24947469) Ensembl
Ensembl
MGI
PMID:24947469 GO_REF:0000107 MGI:5696765 NCBI chr 4:15,469,865...15,601,557
Ensembl chr 4:15,469,865...15,601,552
JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5912686|PMID:28817564) MGI
Ensembl
Ensembl
PMID:28817564 GO_REF:0000107 MGI:5912686 NCBI chr 9:87,966,441...87,974,533
Ensembl chr 9:87,966,441...87,974,753
JBrowse link
G CECR2 CECR2 histone acetyl-lysine reader involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4822542|PMID:20589882)
(MGI:4880797|PMID:21246654)
(MGI:3530173|PMID:15640247)
Ensembl
Ensembl
MGI
PMID:15640247 PMID:20589882 PMID:21246654 GO_REF:0000107 MGI:3530173 MGI:4822542 MGI:4880797 NCBI chr22:17,359,949...17,558,151
Ensembl chr22:17,359,949...17,558,151
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(MGI:3703464|PMID:17229766) UniProt
MGI
Ensembl
UniProt
PMID:17229766 GO_REF:0000024 GO_REF:0000107 MGI:3703464 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2384266|PMID:12149478) Ensembl
Ensembl
MGI
PMID:12149478 GO_REF:0000107 MGI:2384266 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5509110|PMID:23742838) MGI
Ensembl
PMID:23742838 GO_REF:0000107 MGI:5509110 NCBI chr16:3,495,427...3,539,048
Ensembl chr16:3,500,976...3,539,048
JBrowse link
G COBL cordon-bleu WH2 repeat protein involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2676511|PMID:14512015) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:14512015 GO_REF:0000024 GO_REF:0000107 MGI:2676511 NCBI chr 7:51,016,212...51,316,809
Ensembl chr 7:51,016,212...51,316,818
JBrowse link
G DEAF1 DEAF1 transcription factor involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr11:644,220...707,083
Ensembl chr11:644,233...707,118
JBrowse link
G DLC1 DLC1 Rho GTPase activating protein involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3529660|PMID:15710412) UniProt
UniProt
MGI
PMID:15710412 GO_REF:0000024 MGI:3529660 NCBI chr 8:13,083,361...13,604,620
Ensembl chr 8:13,083,361...13,604,610
JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2389015|PMID:12421720) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:12421720 GO_REF:0000024 GO_REF:0000107 MGI:2389015 NCBI chr17:7,225,342...7,234,517
Ensembl chr17:7,225,342...7,234,517
JBrowse link
G ENAH ENAH actin regulator acts_upstream_of_or_within ISO (MGI:1331576|PMID:10069337)
(MGI:3054149|PMID:15371503)
MGI PMID:10069337 PMID:15371503 MGI:1331576 MGI:3054149 NCBI chr 1:225,486,829...225,653,878
Ensembl chr 1:225,486,765...225,653,142
JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in
acts_upstream_of_or_within
IMP
ISS
ISO
(PMID:21840926)
(MGI:4367921|PMID:19877275)
UniProt
UniProt
MGI
PMID:19877275 PMID:21840926 GO_REF:0000024 MGI:4367921 NCBI chr19:49,806,866...49,813,553
Ensembl chr19:49,806,866...49,817,376
JBrowse link
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3616416|PMID:16495441) Ensembl
Ensembl
MGI
PMID:16495441 GO_REF:0000107 MGI:3616416 NCBI chr 8:28,494,212...28,574,258
Ensembl chr 8:28,494,205...28,574,267
JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3616416|PMID:16495441) Ensembl
Ensembl
MGI
PMID:16495441 GO_REF:0000107 MGI:3616416 NCBI chr 8:103,298,494...103,332,866
Ensembl chr 8:103,298,433...103,332,866
JBrowse link
G GLMN glomulin, FKBP associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5320488|PMID:22405651) Ensembl
Ensembl
MGI
PMID:22405651 GO_REF:0000107 MGI:5320488 NCBI chr 1:92,246,402...92,370,844
Ensembl chr 1:92,246,402...92,298,987
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:4947318|PMID:21262862) UniProt
UniProt
Ensembl
MGI
PMID:21262862 GO_REF:0000024 GO_REF:0000107 MGI:4947318 NCBI chr 8:101,492,439...101,681,200
Ensembl chr 8:101,492,439...101,669,726
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:24,319,357...24,364,482
Ensembl chr 1:24,199,558...24,364,482
JBrowse link
G HECTD1 HECT domain E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804) Ensembl
Ensembl
MGI
PMID:9636176 PMID:15755804 GO_REF:0000107 MGI:1267118 MGI:3577662 NCBI chr14:31,100,117...31,207,793
Ensembl chr14:31,100,117...31,207,804
JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:129,440,224...129,520,507
Ensembl chr 3:129,429,607...129,520,510
JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828200|PMID:18930042) Ensembl
Ensembl
MGI
PMID:18930042 GO_REF:0000107 MGI:3828200 NCBI chr 2:27,444,377...27,489,743
Ensembl chr 2:27,444,377...27,489,805
JBrowse link
G IFT57 intraflagellar transport 57 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703110|PMID:17027958) Ensembl
Ensembl
MGI
PMID:17027958 GO_REF:0000107 MGI:3703110 NCBI chr 3:108,160,812...108,222,424
Ensembl chr 3:108,160,812...108,222,435
JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709911|PMID:17325035) Ensembl
Ensembl
MGI
PMID:17325035 GO_REF:0000107 MGI:3709911 NCBI chr17:42,113,111...42,121,367
Ensembl chr17:42,113,111...42,121,367
JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082
JBrowse link
G KDM6A lysine demethylase 6A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5448135|PMID:22949634) Ensembl
Ensembl
MGI
PMID:22949634 GO_REF:0000107 MGI:5448135 NCBI chr  X:44,873,188...45,112,779
Ensembl chr  X:44,873,188...45,112,779
JBrowse link
G KIF20B kinesin family member 20B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3577662|PMID:15755804) Ensembl
Ensembl
MGI
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chr10:89,701,590...89,774,934
Ensembl chr10:89,701,590...89,774,939
JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2154554|PMID:11719201) Ensembl
Ensembl
MGI
PMID:11719201 GO_REF:0000107 MGI:2154554 NCBI chr 9:124,011,768...124,033,301
Ensembl chr 9:124,001,670...124,033,301
JBrowse link
G LIAS lipoic acid synthetase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3577662|PMID:15755804) Ensembl
Ensembl
MGI
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chr 4:39,459,056...39,479,506
Ensembl chr 4:39,459,004...39,485,109
JBrowse link
G LMO4 LIM domain only 4 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3573996|PMID:15691703)
(MGI:3029621|PMID:14966285)
UniProt
UniProt
Ensembl
MGI
PMID:14966285 PMID:15691703 GO_REF:0000024 GO_REF:0000107 MGI:3029621 MGI:3573996 NCBI chr 1:87,328,880...87,348,923
Ensembl chr 1:87,328,880...87,348,923
JBrowse link
G LRP2 LDL receptor related protein 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:169,127,109...169,362,534
Ensembl chr 2:169,127,109...169,362,534
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:1347661|PMID:10545599)
(MGI:4413372|PMID:19795512)
(MGI:4413396|PMID:19653321)
(MGI:3055483|PMID:15469977)
MGI PMID:10545599 PMID:15469977 PMID:19653321 PMID:19795512 MGI:1347661 MGI:3055483 MGI:4413372 MGI:4413396 MGI:61254 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G MED12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4839483|PMID:20630950) Ensembl
Ensembl
MGI
PMID:20630950 GO_REF:0000107 MGI:4839483 NCBI chr  X:71,118,596...71,142,450
Ensembl chr  X:71,118,543...71,144,103
JBrowse link
G MKS1 MKS transition zone complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367169|PMID:19776033)
(MGI:5487695|PMID:23454480)
MGI
Ensembl
Ensembl
PMID:19776033 PMID:23454480 GO_REF:0000107 MGI:4367169 MGI:5487695 NCBI chr17:58,205,441...58,219,255
Ensembl chr17:58,205,441...58,219,605
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887
JBrowse link
G MTHFR methylenetetrahydrofolate reductase acts_upstream_of NAS
IMP
(PMID:9349452)
(PMID:25855017), (PMID:29222906)
BHF-UCL
BHF-UCL
PMID:9349452 PMID:25855017 PMID:29222906 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chr 2:182,909,115...183,038,457
Ensembl chr 2:182,909,115...183,038,858
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640733|PMID:16712836) Ensembl
MGI
Ensembl
PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr17:56,593,699...56,595,611
Ensembl chr17:56,593,699...56,595,611
JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3577662|PMID:15755804) Ensembl
Ensembl
MGI
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chr 3:193,593,208...193,697,811
Ensembl chr 3:193,593,144...193,697,811
JBrowse link
G PAX2 paired box 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chr 2:222,199,887...222,298,998
Ensembl chr 2:222,199,887...222,298,998
JBrowse link
G PFN1 profilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331576|PMID:10069337) MGI
Ensembl
Ensembl
PMID:10069337 GO_REF:0000107 MGI:1331576 NCBI chr17:4,945,652...4,948,530
Ensembl chr17:4,945,652...4,949,061
JBrowse link
G PHACTR4 phosphatase and actin regulator 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:28,369,740...28,500,364
Ensembl chr 1:28,369,582...28,500,364
JBrowse link
G PLXNB2 plexin B2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:50,274,979...50,307,646
Ensembl chr22:50,274,979...50,307,646
JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IMP (PMID:21901791) UniProt
UniProt
PMID:21901791 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5308523|PMID:22007132) Ensembl
Ensembl
MGI
PMID:22007132 GO_REF:0000107 MGI:5308523 NCBI chr19:14,091,688...14,117,762
Ensembl chr19:14,091,688...14,118,084
JBrowse link
G PRKACB protein kinase cAMP-activated catalytic subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5308523|PMID:22007132) Ensembl
Ensembl
MGI
PMID:22007132 GO_REF:0000107 MGI:5308523 NCBI chr 1:84,078,079...84,238,498
Ensembl chr 1:84,078,062...84,238,498
JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1095757|PMID:9262482) Ensembl
Ensembl
MGI
PMID:9262482 GO_REF:0000107 MGI:1095757 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4830023|PMID:20704721)
(MGI:3046397|PMID:15229603)
MGI
Ensembl
PMID:15229603 PMID:20704721 GO_REF:0000107 MGI:3046397 MGI:4830023 NCBI chr 6:43,076,314...43,161,715
Ensembl chr 6:43,076,307...43,161,719
JBrowse link
G RAB23 RAB23, member RAS oncogene family acts_upstream_of_or_within
involved_in
ISO (MGI:1267118|PMID:9636176)
(MGI:69552|PMID:7720556)
MGI
UniProt
PMID:7720556 PMID:9636176 MGI:1267118 MGI:69552 NCBI chr 6:57,186,992...57,222,307
Ensembl chr 6:57,186,992...57,222,307
JBrowse link
G RALA RAS like proto-oncogene A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:39,623,572...39,708,120
Ensembl chr 7:39,623,565...39,708,120
JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69060|PMID:7607067) Ensembl
Ensembl
MGI
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr17:40,309,180...40,357,643
Ensembl chr17:40,309,180...40,357,643
JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69060|PMID:7607067) Ensembl
Ensembl
MGI
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr12:53,210,569...53,232,209
Ensembl chr12:53,210,567...53,232,980
JBrowse link
G RGMA repulsive guidance molecule BMP co-receptor a involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3027667|PMID:14749425) Ensembl
Ensembl
MGI
PMID:14749425 GO_REF:0000107 MGI:3027667 NCBI chr15:93,035,271...93,089,211
Ensembl chr15:93,035,271...93,089,211
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 acts_upstream_of_or_within ISO (MGI:3703464|PMID:17229766) MGI PMID:17229766 MGI:3703464 NCBI chr 2:11,179,759...11,345,437
Ensembl chr 2:11,179,759...11,348,330
JBrowse link
G RPS7 ribosomal protein S7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3056222|PMID:15384171) Ensembl
Ensembl
MGI
PMID:15384171 GO_REF:0000107 MGI:3056222 NCBI chr 2:3,575,260...3,580,920
Ensembl chr 2:3,575,260...3,580,920
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:3698636|PMID:16790473) MGI PMID:16790473 MGI:3698636 NCBI chr16:51,135,982...51,152,334
Ensembl chr16:51,135,982...51,152,334
JBrowse link
G SALL4 spalt like transcription factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3698636|PMID:16790473) Ensembl
Ensembl
MGI
PMID:16790473 GO_REF:0000107 MGI:3698636 NCBI chr20:51,782,331...51,802,521
Ensembl chr20:51,782,331...51,802,521
JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within
IMP
ISO
IEA
(PMID:22095531)
(MGI:5050793|PMID:21515572)
(MGI:4819429|PMID:20643356)
UniProt
MGI
UniProt
Ensembl
PMID:20643356 PMID:21515572 PMID:22095531 GO_REF:0000107 MGI:4819429 MGI:5050793 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773
JBrowse link
G SDC4 syndecan 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5498591|PMID:23760952) Ensembl
Ensembl
MGI
PMID:23760952 GO_REF:0000107 MGI:5498591 NCBI chr20:45,325,288...45,348,424
Ensembl chr20:45,325,288...45,348,424
JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4438817|PMID:19966784)
(MGI:4439427|PMID:20215345)
Ensembl
Ensembl
MGI
PMID:19966784 PMID:20215345 GO_REF:0000107 MGI:4438817 MGI:4439427 NCBI chr 4:109,433,815...109,540,896
Ensembl chr 4:109,433,772...109,540,896
JBrowse link
G SEMA4C semaphorin 4C involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:96,859,718...96,870,830
Ensembl chr 2:96,859,718...96,870,757
JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4431136|PMID:20133625) Ensembl
Ensembl
MGI
PMID:20133625 GO_REF:0000107 MGI:4431136 NCBI chr 3:47,016,436...47,164,840
Ensembl chr 3:47,016,428...47,164,113
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083
JBrowse link
G SHROOM3 shroom family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3610718|PMID:16249236) InterPro
InterPro
MGI
PMID:16249236 GO_REF:0000002 MGI:3610718 NCBI chr 4:76,435,229...76,783,253
Ensembl chr 4:76,435,229...76,783,253
JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1095997|PMID:9284043) BHF-UCL
BHF-UCL
MGI
PMID:9284043 GO_REF:0000024 MGI:1095997 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,228,319...2,310,213
JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360135|PMID:19592578) Ensembl
Ensembl
MGI
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chr15:40,844,048...40,858,207
Ensembl chr15:40,844,018...40,858,207
JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360135|PMID:19592578) Ensembl
MGI
Ensembl
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chr19:38,264,573...38,292,615
Ensembl chr19:38,244,035...38,292,615
JBrowse link
G ST14 ST14 transmembrane serine protease matriptase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360135|PMID:19592578) Ensembl
Ensembl
MGI
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chr11:130,159,782...130,210,362
Ensembl chr11:130,159,782...130,210,362
JBrowse link
G STIL STIL centriolar assembly protein involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1339521|PMID:10385121) BHF-UCL
BHF-UCL
MGI
PMID:10385121 GO_REF:0000024 MGI:1339521 NCBI chr 1:47,250,139...47,314,896
Ensembl chr 1:47,250,139...47,314,892
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604917|PMID:16155214) Ensembl
Ensembl
MGI
PMID:16155214 GO_REF:0000107 MGI:3604917 NCBI chr10:102,502,819...102,633,535
Ensembl chr10:102,503,972...102,633,535
JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3701028|PMID:16835439) Ensembl
Ensembl
MGI
PMID:16835439 GO_REF:0000107 MGI:3701028 NCBI chr 6:166,157,656...166,168,655
Ensembl chr 6:166,157,656...166,168,700
JBrowse link
G TEAD2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3763398|PMID:17868131) Ensembl
Ensembl
MGI
PMID:17868131 GO_REF:0000107 MGI:3763398 NCBI chr19:49,340,595...49,362,416
Ensembl chr19:49,340,595...49,362,457
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1313057|PMID:9811866), (MGI:80519|PMID:8622766) MGI PMID:8622766 PMID:9811866 MGI:1313057 MGI:80519 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:3697552|PMID:17082251) MGI PMID:17082251 MGI:3697552 NCBI chr18:3,412,009...3,459,978
Ensembl chr18:3,411,608...3,459,978
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4453264|PMID:20178780) Ensembl
Ensembl
MGI
PMID:20178780 GO_REF:0000107 MGI:4453264 NCBI chr12:123,584,552...123,598,582
Ensembl chr12:123,584,533...123,598,582
JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:36,483,769...36,510,272
Ensembl chr11:36,483,769...36,510,272
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4356244|PMID:19098426) Ensembl
Ensembl
MGI
PMID:19098426 GO_REF:0000107 MGI:4356244 NCBI chr 3:32,817,997...32,897,824
Ensembl chr 3:32,817,997...32,897,824
JBrowse link
G TSC1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2137425|PMID:11438694) Ensembl
Ensembl
MGI
PMID:11438694 GO_REF:0000107 MGI:2137425 NCBI chr 9:132,891,349...132,945,378
Ensembl chr 9:132,891,348...132,946,874
JBrowse link
G TSC2 TSC complex subunit 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1333508|PMID:10096549) UniProt
UniProt
MGI
PMID:10096549 GO_REF:0000024 MGI:1333508 NCBI chr16:2,047,985...2,089,491
Ensembl chr16:2,047,967...2,089,491
JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3841513|PMID:19223390) Ensembl
Ensembl
MGI
PMID:19223390 GO_REF:0000107 MGI:3841513 NCBI chr12:2,890,891...2,941,138
Ensembl chr12:2,877,223...2,941,138
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:72096|PMID:7729687) Ensembl
Ensembl
MGI
PMID:7729687 GO_REF:0000107 MGI:72096 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3046397|PMID:15229603)
(MGI:2676511|PMID:14512015)
(MGI:2153976|PMID:11709546), (MGI:2449213|PMID:12499390)
(MGI:3703464|PMID:17229766)
(MGI:4880797|PMID:21246654)
(MGI:3714704|PMID:17433286)
(MGI:4438817|PMID:19966784)
(MGI:5498591|PMID:23760952)
UniProt
UniProt
MGI
PMID:11709546 PMID:12499390 PMID:14512015 PMID:15229603 PMID:17229766 More... GO_REF:0000024 MGI:2153976 MGI:2449213 MGI:2676511 MGI:3046397 MGI:3703464 MGI:3714704 MGI:4438817 MGI:4880797 MGI:5498591 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
G VASP vasodilator stimulated phosphoprotein involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3054149|PMID:15371503)
GO_Central
GO_Central
Ensembl
MGI
PMID:15371503 PMID:21873635 GO_REF:0000107 MGI:3054149 NCBI chr19:45,507,479...45,526,983
Ensembl chr19:45,506,579...45,526,983
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714704|PMID:17433286)
(MGI:4413372|PMID:19795512)
MGI
Ensembl
PMID:17433286 PMID:19795512 GO_REF:0000107 MGI:3714704 MGI:4413372 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (MGI:3624924|PMID:16598713) MGI PMID:16598713 MGI:3624924 NCBI chr 2:144,384,081...144,520,119
Ensembl chr 2:144,364,364...144,521,057
JBrowse link
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chr13:99,981,784...99,986,765
Ensembl chr13:99,981,784...99,986,765
JBrowse link
G ZIC5 Zic family member 5 acts_upstream_of_or_within ISO (MGI:3051968|PMID:15136147) MGI PMID:15136147 MGI:3051968 NCBI chr13:99,962,964...99,971,909
Ensembl chr13:99,962,964...99,971,767
JBrowse link
neural tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRPF1 bromodomain and PHD finger containing 1 acts_upstream_of_or_within ISO (MGI:5806011|PMID:27528195) MGI PMID:27528195 MGI:5806011 NCBI chr 3:9,731,735...9,748,015
Ensembl chr 3:9,731,729...9,748,019
JBrowse link
G CASP8 caspase 8 acts_upstream_of_or_within ISO (MGI:3609631|PMID:12404118) MGI PMID:12404118 MGI:3609631 NCBI chr 2:201,233,443...201,287,711
Ensembl chr 2:201,233,443...201,361,836
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2179743|PMID:11694877) MGI
Ensembl
PMID:11694877 GO_REF:0000107 MGI:2179743 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:2154585|PMID:11716496) MGI PMID:11716496 MGI:2154585 NCBI chr16:19,067,614...19,083,097
Ensembl chr16:19,067,614...19,080,095
JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679893|PMID:14603322) MGI
Ensembl
PMID:14603322 GO_REF:0000107 MGI:2679893 NCBI chr 2:27,444,377...27,489,743
Ensembl chr 2:27,444,377...27,489,805
JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3579954|PMID:15930098) Ensembl
Ensembl
MGI
PMID:15930098 GO_REF:0000107 MGI:3579954 NCBI chr20:43,590,937...43,647,299
Ensembl chr20:43,590,937...43,647,299
JBrowse link
G IPMK inositol polyphosphate multikinase acts_upstream_of_or_within ISO (MGI:3583505|PMID:15939867) MGI PMID:15939867 MGI:3583505 NCBI chr10:58,191,517...58,267,894
Ensembl chr10:58,191,517...58,267,894
JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (MGI:3607973|PMID:16260493) MGI PMID:16260493 MGI:3607973 NCBI chr 6:90,513,579...90,587,072
Ensembl chr 6:90,513,573...90,587,072
JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603078|PMID:16000382) Ensembl
Ensembl
MGI
PMID:16000382 GO_REF:0000107 MGI:3603078 NCBI chr18:21,704,916...21,870,953
Ensembl chr18:21,704,957...21,870,953
JBrowse link
G NUP50 nucleoporin 50 acts_upstream_of_or_within ISO (MGI:1860670|PMID:10891500) MGI PMID:10891500 MGI:1860670 NCBI chr22:45,163,925...45,188,017
Ensembl chr22:45,163,925...45,188,017
JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:8124714 RGD:69996 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385
JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:21,593,751...21,598,619
Ensembl chr 6:21,593,751...21,598,619
JBrowse link
G STK3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412133|PMID:19786569) Ensembl
Ensembl
MGI
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr 8:98,343,975...98,942,610
Ensembl chr 8:98,371,228...98,942,827
JBrowse link
G STK4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412133|PMID:19786569) Ensembl
Ensembl
MGI
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr20:44,966,512...45,080,021
Ensembl chr20:44,966,479...45,080,021
JBrowse link
G TCTN1 tectonic family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3610767|PMID:16357211) Ensembl
Ensembl
MGI
PMID:16357211 GO_REF:0000107 MGI:3610767 NCBI chr12:110,614,129...110,649,430
Ensembl chr12:110,614,027...110,663,431
JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136130|PMID:11406614) MGI
Ensembl
PMID:11406614 GO_REF:0000107 MGI:2136130 NCBI chr12:2,890,891...2,941,138
Ensembl chr12:2,877,223...2,941,138
JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISS
Ensembl
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within