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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial tube morphogenesis
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Accession:GO:0060562 term browser browse the term
Definition:The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.



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epithelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GREB1L GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO (MGI:6094060|PMID:29100091) MGI PMID:29100091 MGI:6094060 NCBI chr 7:66,489,124...66,758,207
Ensembl chr 7:66,503,999...66,639,013
JBrowse link
G PRKX protein kinase X-linked involved_in ISO (PMID:17980165) UniProt PMID:17980165 NCBI chr  X:1,938,205...2,007,948
Ensembl chr  X:1,945,379...2,014,661
JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP3 caspase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5050793|PMID:21515572) Ensembl
MGI
Ensembl
PMID:21515572 GO_REF:0000107 MGI:5050793 NCBI chr16:45,920,074...45,940,507
Ensembl chr16:45,920,071...45,940,505
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5050793|PMID:21515572) Ensembl
MGI
PMID:21515572 GO_REF:0000107 MGI:5050793 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096
JBrowse link
G LOC609612 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:25,944,350...25,951,010 JBrowse link
G SPECC1L sperm antigen with calponin homology and coiled-coil domains 1 like acts_upstream_of_or_within ISO (MGI:6101898|PMID:26787558) MGI PMID:26787558 MGI:6101898 NCBI chr26:27,994,278...28,127,383
Ensembl chr26:28,025,987...28,125,695
JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATAD2A GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (MGI:3762244|PMID:17565372) MGI PMID:17565372 MGI:3762244 NCBI chr20:43,736,471...43,853,505
Ensembl chr20:43,739,849...43,846,370
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:80520|PMID:8622765) MGI PMID:8622765 MGI:80520 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270
JBrowse link
blood vessel lumenization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,059,463...8,068,742
Ensembl chr30:8,059,512...8,067,940
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:3056004|PMID:15466160) BHF-UCL PMID:15466160 MGI:3056004 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360
JBrowse link
BMP signaling pathway involved in nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3814777|PMID:18614704) MGI
Ensembl
PMID:18614704 GO_REF:0000107 MGI:3814777 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:37,467,431...37,554,770
Ensembl chr 2:37,470,985...37,554,619
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703113|PMID:17078885) Ensembl
MGI
Ensembl
PMID:17078885 GO_REF:0000107 MGI:3703113 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:1889403 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444
JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in ISO (PMID:20818663) BHF-UCL PMID:20818663 NCBI chr22:58,511,210...58,651,949
Ensembl chr22:58,512,212...58,588,666
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO (MGI:2675534|PMID:12975353)
(PMID:20123964)
(MGI:3833040|PMID:19154719)
MGI
BHF-UCL
PMID:12975353 PMID:19154719 PMID:20123964 MGI:2675534 MGI:3833040 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chr28:2,895,916...2,903,543 JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740
JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,059,463...8,068,742
Ensembl chr30:8,059,512...8,067,940
JBrowse link
G EDN1 endothelin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74210|PMID:7615798) Ensembl
Ensembl
MGI
PMID:7615798 GO_REF:0000107 MGI:74210 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383
JBrowse link
G EDNRA endothelin receptor type A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3606840|PMID:15664398) MGI
Ensembl
Ensembl
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chr15:45,823,472...45,878,527
Ensembl chr15:45,823,560...45,876,463
JBrowse link
G ENG endoglin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:55,558,246...55,590,081
Ensembl chr 9:55,558,305...55,589,064
JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:3588904|PMID:15996652) MGI PMID:15996652 MGI:3588904 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:3045573 NCBI chr25:11,231,958...11,410,379
Ensembl chr25:11,231,737...11,407,621
JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3606840|PMID:15664398) MGI
Ensembl
Ensembl
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693
JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588904|PMID:15996652) Ensembl
Ensembl
MGI
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512
JBrowse link
G GDF2 growth differentiation factor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:34,996,767...35,001,094
Ensembl chr 4:34,997,579...35,001,203
JBrowse link
G GNA13 G protein subunit alpha 13 acts_upstream_of_or_within ISO (MGI:3583513|PMID:15919816) MGI PMID:15919816 MGI:3583513 NCBI chr 9:14,932,341...14,972,857
Ensembl chr 9:14,932,335...14,967,881
JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3574706|PMID:15689378) MGI PMID:15689378 MGI:3574706 NCBI chr37:25,616,942...25,622,989 JBrowse link
G KDR kinase insert domain receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23688497) Ensembl
Ensembl
BHF-UCL
PMID:23688497 GO_REF:0000107 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833040|PMID:19154719) MGI
Ensembl
PMID:19154719 GO_REF:0000107 MGI:3833040 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019
JBrowse link
G LOC119863920 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G MIR15B microRNA mir-15b acts_upstream_of ISO (PMID:23688497) BHF-UCL PMID:23688497 NCBI chr34:26,460,663...26,460,722
Ensembl chr34:26,460,645...26,460,741
JBrowse link
G MIR16-1 microRNA mir-16-1 acts_upstream_of ISO (PMID:23083510) BHF-UCL PMID:23083510 NCBI chr22:1,847,020...1,847,084
Ensembl chr22:1,847,007...1,847,093
JBrowse link
G MIR16-2 microRNA mir-16-2 acts_upstream_of ISO (PMID:23083510) BHF-UCL PMID:23083510 NCBI chr34:26,460,807...26,460,871
Ensembl chr34:26,460,807...26,460,871
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr 5:81,294,656...81,434,256
Ensembl chr 5:81,296,214...81,434,250
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr 8:4,337,098...4,346,409
Ensembl chr 8:4,336,450...4,346,100
JBrowse link
G NOTCH4 notch receptor 4 involved_in ISO (MGI:1934537|PMID:11344305) UniProt PMID:11344305 MGI:1934537 NCBI chr12:1,585,249...1,608,721
Ensembl chr12:1,587,918...1,607,760
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3833040|PMID:19154719)
GO_Central
Ensembl
MGI
PMID:19154719 PMID:21873635 GO_REF:0000107 MGI:3833040 NCBI chr 9:48,394,568...48,396,849
Ensembl chr 9:48,394,754...48,395,098
JBrowse link
G NRP1 neuropilin 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3710026|PMID:17428830)
(MGI:5288256|PMID:21852397), (MGI:5484470|PMID:23315162), (MGI:5562961|PMID:24401374)
MGI
BHF-UCL
PMID:17428830 PMID:21852397 PMID:23315162 PMID:24401374 MGI:3710026 MGI:5288256 MGI:5484470 MGI:5562961 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:2389284|PMID:12397115) MGI PMID:12397115 MGI:2389284 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273
JBrowse link
G PLXND1 plexin D1 acts_upstream_of_or_within ISO (MGI:3050159|PMID:15239958)
(MGI:5509072|PMID:23918385)
MGI PMID:15239958 PMID:23918385 MGI:3050159 MGI:5509072 NCBI chr20:5,554,814...5,610,417
Ensembl chr20:5,554,708...5,610,122
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr10:67,242,552...67,308,469
Ensembl chr10:67,244,329...67,275,487
JBrowse link
G RBM15 RNA binding motif protein 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3833189|PMID:18981216) Ensembl
Ensembl
MGI
PMID:18981216 GO_REF:0000107 MGI:3833189 NCBI chr 6:41,645,765...41,653,621
Ensembl chr 6:41,645,769...41,653,799
JBrowse link
G SEMA3E semaphorin 3E involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:22,881,135...22,982,549
Ensembl chr18:22,881,133...23,116,696
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chr34:4,612,202...5,089,071
Ensembl chr34:4,612,142...5,082,280
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583396|PMID:15936751) Ensembl
MGI
PMID:15936751 GO_REF:0000107 MGI:3583396 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3811944|PMID:18804439) Ensembl
Ensembl
MGI
PMID:18804439 GO_REF:0000107 MGI:3811944 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G STK4 serine/threonine kinase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412133|PMID:19786569) MGI
Ensembl
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr24:32,375,630...32,463,848
Ensembl chr24:32,375,189...32,521,042
JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578574|PMID:15843414) Ensembl
Ensembl
MGI
PMID:15843414 GO_REF:0000107 MGI:3578574 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703113|PMID:17078885) MGI
Ensembl
PMID:17078885 GO_REF:0000107 MGI:3703113 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISO (PMID:23083510)
(MGI:3710026|PMID:17428830)
(PMID:23688497)
BHF-UCL
MGI
PMID:17428830 PMID:23083510 PMID:23688497 MGI:3710026 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:3848105 NCBI chr 1:1,027,021...1,121,362
Ensembl chr 1:1,028,695...1,121,588
JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:16,838,267...16,857,004
Ensembl chr15:16,838,582...16,856,946
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3054694|PMID:15340078) Ensembl
Ensembl
MGI
PMID:15340078 GO_REF:0000107 MGI:3054694 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581
JBrowse link
G CSF1 colony stimulating factor 1 acts_upstream_of_or_within ISO (MGI:3640884|PMID:10804170) MGI PMID:10804170 MGI:3640884 NCBI chr 6:42,028,454...42,047,028
Ensembl chr 6:42,034,149...42,049,371
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1932625|PMID:11283268) MGI
Ensembl
PMID:11283268 GO_REF:0000107 MGI:1932625 NCBI chr12:653,800...671,190
Ensembl chr12:653,807...670,543
JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725
JBrowse link
G ETV4 ETS variant transcription factor 4 acts_upstream_of_or_within ISO (MGI:2667785|PMID:12871699)
(MGI:3828920|PMID:18977342)
MGI PMID:12871699 PMID:18977342 MGI:2667785 MGI:3828920 NCBI chr 9:19,715,259...19,731,085
Ensembl chr 9:19,715,535...19,730,456
JBrowse link
G KDM5B lysine demethylase 5B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5619178|PMID:24802759) MGI
Ensembl
PMID:24802759 GO_REF:0000107 MGI:5619178 NCBI chr 7:336,452...415,568
Ensembl chr 7:330,705...412,386
JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3692480|PMID:16973609)
(PMID:21873635)
MGI
GO_Central
PMID:16973609 PMID:21873635 MGI:3692480 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:1355063|PMID:10742104) MGI PMID:10742104 MGI:1355063 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407
JBrowse link
G PML PML nuclear body scaffold acts_upstream_of_or_within ISO (MGI:3839212|PMID:19261859) MGI PMID:19261859 MGI:3839212 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741
JBrowse link
G SLC12A2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:2180693|PMID:8864124) MGI PMID:8864124 MGI:2180693 NCBI chr11:17,143,943...17,256,248
Ensembl chr11:17,143,943...17,253,695
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589531|PMID:16007215) MGI
Ensembl
Ensembl
PMID:16007215 GO_REF:0000107 MGI:3589531 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077
JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within ISO (MGI:3608166|PMID:16222716) MGI PMID:16222716 MGI:3608166 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 acts_upstream_of_or_within ISO (MGI:5504318|PMID:23661704) MGI PMID:23661704 MGI:5504318 NCBI chr34:8,196,733...8,346,215
Ensembl chr34:8,196,716...8,346,309
JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO (MGI:2655949|PMID:12657564)
(MGI:77583|PMID:8675666)
MGI PMID:8675666 PMID:12657564 MGI:2655949 MGI:77583 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3036971|PMID:14699151)
(MGI:3768986|PMID:16672320)
MGI
Ensembl
PMID:14699151 PMID:16672320 GO_REF:0000107 MGI:3036971 MGI:3768986 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (MGI:3583399|PMID:15925496) MGI PMID:15925496 MGI:3583399 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714585|PMID:17522159) Ensembl
Ensembl
MGI
PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G CD44 CD44 molecule acts_upstream_of_or_within ISO (MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:2449954 NCBI chr18:32,735,493...32,826,483
Ensembl chr18:32,737,907...32,827,107
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
NOT|involved_in
ISO PMID:15843474
(MGI:3717986|PMID:17615577)
UniProt PMID:15843474 PMID:17615577 MGI:3717986 RGD:8554075 NCBI chr  X:56,327,104...56,332,608
Ensembl chr  X:56,327,182...56,332,047
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3714576|PMID:17537789) MGI PMID:17537789 MGI:3714576 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G DCHS1 dachsous cadherin-related 1 acts_upstream_of_or_within ISO (MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:4939936 NCBI chr21:29,927,713...29,955,742
Ensembl chr21:29,928,176...29,948,713
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709697|PMID:17435047)
(MGI:3688770|PMID:16105026)
(MGI:3699022|PMID:17172448)
MGI
Ensembl
Ensembl
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 MGI:3688770 MGI:3699022 MGI:3709697 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547
JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:3686561 NCBI chr32:11,017,440...11,022,780 JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662002|PMID:12783782) Ensembl
MGI
PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653
JBrowse link
G FAT4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO (MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:4939936 NCBI chr19:15,157,595...15,332,821
Ensembl chr19:15,158,922...15,332,045
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:12631064) UniProt PMID:12631064 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151
JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:3603080|PMID:16049111) MGI PMID:16049111 MGI:3603080 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:2675756
G GDNF glial cell derived neurotrophic factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675756|PMID:13678594), (MGI:4949995|PMID:21281623) MGI
Ensembl
Ensembl
PMID:13678594 PMID:21281623 GO_REF:0000107 MGI:2675756 MGI:4949995 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (MGI:3611729|PMID:16396903) MGI PMID:16396903 MGI:3611729 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583399|PMID:15925496) MGI
Ensembl
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr  X:104,313,426...104,751,215
Ensembl chr  X:104,313,591...104,751,756
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO (MGI:6094060|PMID:29100091) MGI PMID:29100091 MGI:6094060 NCBI chr 7:66,489,124...66,758,207
Ensembl chr 7:66,503,999...66,639,013
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2683817|PMID:14522971) MGI
Ensembl
PMID:14522971 GO_REF:0000107 MGI:2683817 NCBI chr24:260,139...268,861
Ensembl chr24:261,904...299,287
JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within ISO (MGI:2135652|PMID:11493536) MGI PMID:11493536 MGI:2135652 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919
JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:2135652|PMID:11493536) MGI PMID:11493536 MGI:2135652 NCBI chr36:19,913,064...19,926,868
Ensembl chr36:19,914,431...19,916,766
JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO (MGI:6432531|PMID:32017326) MGI PMID:32017326 MGI:6432531 NCBI chr 5:37,400,144...37,494,154
Ensembl chr 5:37,400,279...37,494,089
JBrowse link
G ILK integrin linked kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr21:29,911,326...29,917,972
Ensembl chr21:29,911,364...29,917,974
JBrowse link
G LAMA5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:2678847 NCBI chr24:46,315,008...46,351,279 JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7909549) Ensembl
Ensembl
UniProt
PMID:7909549 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G LOC489516 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 involved_in ISO (MGI:6432531|PMID:32017326) MGI PMID:32017326 MGI:6432531 NCBI chr 5:38,023,858...38,066,548
Ensembl chr 5:38,023,684...38,065,487
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G NPNT nephronectin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714574|PMID:17537792) MGI
Ensembl
Ensembl
PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chr32:26,706,147...26,781,792
Ensembl chr32:26,705,476...26,781,275
JBrowse link
G PAX2 paired box 2 acts_upstream_of_or_within
involved_in
ISO (MGI:3768986|PMID:16672320)
(PMID:1337742)
MGI
UniProt
PMID:1337742 PMID:16672320 MGI:3768986 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
G PBX1 PBX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2451200|PMID:12591246) MGI
Ensembl
Ensembl
PMID:12591246 GO_REF:0000107 MGI:2451200 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497
JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:2675756 NCBI chr 8:48,059,554...48,110,534
Ensembl chr 8:48,059,552...48,075,170
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
G PSPN persephin acts_upstream_of_or_within ISO (MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:1196665 NCBI chr20:53,780,895...53,783,876
Ensembl chr20:53,783,171...53,783,696
JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within ISO (MGI:4367286|PMID:19809516) MGI PMID:19809516 MGI:4367286 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of
ISO (MGI:2447943|PMID:12482961)
(MGI:5563280|PMID:24550112)
UniProt
MGI
PMID:12482961 PMID:24550112 MGI:2447943 MGI:5563280 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611729|PMID:16396903) Ensembl
MGI
PMID:16396903 GO_REF:0000107 MGI:3611729 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662002|PMID:12783782) Ensembl
Ensembl
MGI
PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583399|PMID:15925496) Ensembl
MGI
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405
JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:8787755) UniProt PMID:8787755 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G TCF21 transcription factor 21 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:1202620|PMID:9507058)
(MGI:1347485|PMID:10572052)
MGI
Ensembl
UniProt
PMID:9507058 PMID:10572052 GO_REF:0000024 GO_REF:0000107 MGI:1202620 MGI:1347485 NCBI chr 1:26,856,281...26,859,654
Ensembl chr 1:26,856,587...26,859,647
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 RGD
MGI
PMID:10963667 RGD:2308864 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
G TMEM59L transmembrane protein 59 like involved_in ISO (MGI:6432531|PMID:32017326) MGI PMID:32017326 MGI:6432531 NCBI chr20:44,450,164...44,455,983
Ensembl chr20:44,450,349...44,455,933
JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
G WNT6 Wnt family member 6 acts_upstream_of_or_within ISO (MGI:2178881|PMID:11948913) MGI PMID:11948913 MGI:2178881 NCBI chr37:25,452,875...25,457,437
Ensembl chr37:25,453,905...25,456,654
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
G WT1 WT1 transcription factor involved_in ISO (PMID:10101119)
(MGI:1333093|PMID:10101119)
UniProt PMID:10101119 MGI:1333093 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000
JBrowse link
branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO (MGI:2178150|PMID:11900463)
(MGI:3052392|PMID:15282149)
MGI PMID:11900463 PMID:15282149 MGI:2178150 MGI:3052392 NCBI chr11:50,223,880...50,276,745
Ensembl chr11:50,226,242...50,276,730
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G BMP7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:3575981|PMID:15831470) MGI PMID:15831470 MGI:3575981 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653
JBrowse link
G CASR calcium sensing receptor ISO positive regulation RGD PMID:20117086 RGD:7206840 NCBI chr33:25,340,822...25,432,814
Ensembl chr33:25,405,846...25,432,559
JBrowse link
G CLIC4 chloride intracellular channel 4 acts_upstream_of_or_within ISO (MGI:3837628|PMID:19197003) MGI PMID:19197003 MGI:3837628 NCBI chr 2:74,903,653...74,974,103
Ensembl chr 2:74,906,948...74,974,032
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3617296|PMID:16452165) MGI PMID:16452165 MGI:3617296 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G EGF epidermal growth factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3575981|PMID:15831470) MGI
Ensembl
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within ISO (MGI:1934988|PMID:11356025) MGI PMID:11356025 MGI:1934988 NCBI chr17:15,627,739...15,636,513 JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (MGI:1277743|PMID:9731531) MGI PMID:9731531 MGI:1277743 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658
JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (MGI:3608164|PMID:16247775) MGI PMID:16247775 MGI:3608164 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430439|PMID:20040500) Ensembl
Ensembl
MGI
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (MGI:3616136|PMID:15059953) MGI PMID:15059953 MGI:3616136 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3613102|PMID:16375885) MGI
Ensembl
PMID:16375885 GO_REF:0000107 MGI:3613102 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042
JBrowse link
G LAMA5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:2678847 NCBI chr24:46,315,008...46,351,279 JBrowse link
G LOC100856382 matrix Gla protein ISO fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr27:31,735,301...31,738,673
Ensembl chr27:31,734,660...31,738,673
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027
JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:32,865,972...32,878,712
Ensembl chr 9:32,860,995...32,879,338
JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3527919|PMID:15572153) Ensembl
Ensembl
MGI
PMID:15572153 GO_REF:0000107 MGI:3527919 NCBI chr 8:3,183,419...3,193,079
Ensembl chr 8:3,183,606...3,194,122
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3574742|PMID:15716345) MGI PMID:15716345 MGI:3574742 NCBI chr17:11,720,857...11,724,308 JBrowse link
G NKX3-1 NK3 homeobox 1 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:1891543|PMID:11002344) MGI
UniProt
PMID:11002344 GO_REF:0000024 MGI:1891543 NCBI chr25:33,815,343...33,817,465
Ensembl chr25:33,815,095...33,817,474
JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:3529381|PMID:15064243) MGI PMID:15064243 MGI:3529381 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:12482949)
(MGI:5603942|PMID:24939912)
UniProt PMID:12482949 PMID:24939912 MGI:5603942 NCBI chr 6:38,811,051...38,865,503
Ensembl chr 6:38,837,964...38,865,503
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin acts_upstream_of_positive_effect
acts_upstream_of_or_within
ISS
ISO
(MGI:4880601|PMID:20875407) UniProt
UniProt
UniProt
PMID:20875407 GO_REF:0000024 MGI:4880601 NCBI chr12:19,280,866...19,744,669
Ensembl chr12:19,286,822...19,744,141
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3039057|PMID:15042703) Ensembl
Ensembl
MGI
PMID:15042703 GO_REF:0000107 MGI:3039057 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166
JBrowse link
G PXN paxillin acts_upstream_of_or_within ISO (MGI:2680875|PMID:14636584) MGI PMID:14636584 MGI:2680875 NCBI chr26:16,157,231...16,224,028
Ensembl chr26:16,159,025...16,184,820
JBrowse link
G RASIP1 Ras interacting protein 1 involved_in ISO (MGI:5052000|PMID:21396893) UniProt PMID:21396893 MGI:5052000 NCBI chr 1:107,583,169...107,597,683
Ensembl chr 1:107,581,424...107,597,682
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chr34:4,612,202...5,089,071
Ensembl chr34:4,612,142...5,082,280
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3050270|PMID:15305287)
(MGI:3039063|PMID:15042696)
(MGI:1289788|PMID:9768363)
MGI PMID:9768363 PMID:15042696 PMID:15305287 MGI:1289788 MGI:3039063 MGI:3050270 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO (MGI:1331548|PMID:10074434) MGI PMID:10074434 MGI:1331548 NCBI chr22:33,366,139...33,371,102
Ensembl chr22:33,366,931...33,367,878
JBrowse link
G TIMELESS timeless circadian regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2675515|PMID:12950082) Ensembl
MGI
PMID:12950082 GO_REF:0000107 MGI:2675515 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
G TMEM67 transmembrane protein 67 involved_in ISO (MGI:4441259|PMID:17185389) UniProt PMID:17185389 MGI:4441259 NCBI chr29:38,655,531...38,715,774
Ensembl chr29:38,654,733...38,720,559
JBrowse link
G VEGFA vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:3613102 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within ISO (MGI:2178881|PMID:11948913) MGI PMID:11948913 MGI:2178881 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within ISO (MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:3588895 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8674409) MGI
Ensembl
Ensembl
PMID:8674409 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3788965|PMID:18367557) Ensembl
Ensembl
MGI
PMID:18367557 GO_REF:0000107 MGI:3788965 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
Ensembl
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3688953|PMID:16989802) MGI
UniProt
PMID:16989802 GO_REF:0000024 MGI:3688953 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
G RDH10 retinol dehydrogenase 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709664|PMID:17473173) MGI
Ensembl
Ensembl
PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within ISO (MGI:5052190|PMID:21764747) MGI PMID:21764747 MGI:5052190 NCBI chr19:16,969,869...16,976,573
Ensembl chr19:16,970,904...16,972,089
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr22:33,366,139...33,371,102
Ensembl chr22:33,366,931...33,367,878
JBrowse link
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (MGI:5586932|PMID:25043473) MGI PMID:25043473 MGI:5586932 NCBI chr 5:29,394,760...29,495,977
Ensembl chr 5:29,394,541...29,496,251
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9740653) MGI
Ensembl
Ensembl
PMID:9740653 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1277744|PMID:9731532) Ensembl
MGI
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO (MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:5300435 NCBI chr15:29,280,423...29,350,449
Ensembl chr15:29,298,078...29,350,553
JBrowse link
G TNC tenascin C ISO RGD PMID:16928692 RGD:4889612 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSH cathepsin H involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:58,103,284...58,113,958
Ensembl chr 3:58,103,291...58,113,718
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin acts_upstream_of_or_within ISO (MGI:3703920|PMID:17369357) MGI PMID:17369357 MGI:3703920 NCBI chr13:62,925,761...62,936,753
Ensembl chr13:62,926,301...62,936,738
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:4422106 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902
distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLHL3 kelch like family member 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:25,329,922...25,505,281
Ensembl chr11:25,334,241...25,443,494
JBrowse link
G VPS25 vacuolar protein sorting 25 homolog involved_in ISO (PMID:23453970), (PMID:23576762) UniProt PMID:23453970 PMID:23576762 NCBI chr 9:20,242,230...20,247,396 JBrowse link
G WNK4 WNK lysine deficient protein kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,224,726...20,241,214
Ensembl chr 9:20,157,410...20,241,376
JBrowse link
embryonic epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RET ret proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513229|PMID:15569713) MGI
Ensembl
Ensembl
PMID:15569713 GO_REF:0000107 MGI:3513229 NCBI chr28:3,946,132...3,995,505
Ensembl chr28:3,947,232...3,994,210
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 acts_upstream_of_or_within ISO (MGI:3513229|PMID:15569713) MGI PMID:15569713 MGI:3513229 NCBI chr10:16,621,445...16,665,366 JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624584|PMID:16546160) MGI
Ensembl
PMID:16546160 GO_REF:0000107 MGI:3624584 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1927045|PMID:11076684) Ensembl
Ensembl
MGI
PMID:11076684 GO_REF:0000107 MGI:1927045 NCBI chr 4:55,231,061...55,234,640
Ensembl chr 4:55,231,481...55,234,265
JBrowse link
embryonic heart tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISO (MGI:4354447|PMID:19609448) BHF-UCL PMID:19609448 MGI:4354447
G MEGF8 multiple EGF like domains 8 involved_in ISS CAFA GO_REF:0000024 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755
JBrowse link
G RYR2 ryanodine receptor 2 involved_in ISO (MGI:1267127|PMID:9628868) UniProt PMID:9628868 MGI:1267127 NCBI chr 4:2,371,868...2,908,132
Ensembl chr 4:2,373,114...2,907,875
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in ISO (MGI:4946573|PMID:21305474) BHF-UCL PMID:21305474 MGI:4946573 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124
JBrowse link
G TBX20 T-box transcription factor 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507
JBrowse link
G TEAD1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chr21:35,667,862...35,935,180
Ensembl chr21:35,566,865...35,934,438
JBrowse link
G TEAD2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3773640|PMID:18332127) Ensembl
Ensembl
MGI
PMID:18332127 GO_REF:0000107 MGI:3773640 NCBI chr 1:107,115,014...107,130,563
Ensembl chr 1:107,115,094...107,131,038
JBrowse link
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chr 5:29,394,760...29,495,977
Ensembl chr 5:29,394,541...29,496,251
JBrowse link
endothelial tube lumen extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHOA ras homolog family member A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20208559) MGI
Ensembl
Ensembl
PMID:20208559 GO_REF:0000107 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215
JBrowse link
G STARD13 StAR related lipid transfer domain containing 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20208559) MGI
Ensembl
Ensembl
PMID:20208559 GO_REF:0000107 NCBI chr25:6,605,057...7,117,873
Ensembl chr25:6,872,773...7,115,466
JBrowse link
endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:3,075,373...3,090,549
Ensembl chr27:3,076,124...3,092,469
JBrowse link
G BSG basigin involved_in ISO (PMID:19837976) UniProt PMID:19837976 NCBI chr20:57,942,703...57,951,089
Ensembl chr20:57,943,276...57,951,061
JBrowse link
G CCM2 CCM2 scaffold protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19151727) MGI
Ensembl
Ensembl
PMID:19151727 GO_REF:0000107 NCBI chr16:10,347,801...10,392,560
Ensembl chr16:10,347,145...10,394,594
JBrowse link
G CSNK2B casein kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,149,467...1,154,417
Ensembl chr12:1,149,548...1,154,418
JBrowse link
G CTNNB1 catenin beta 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO RGD PMID:24955809 RGD:11352686 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740
JBrowse link
G KDR kinase insert domain receptor ISO RGD PMID:25942475 RGD:126925211 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042
JBrowse link
G MIR21 microRNA mir-21 involved_in ISO (PMID:21347332) BHF-UCL PMID:21347332 NCBI chr 9:34,340,550...34,340,609
Ensembl chr 9:34,340,533...34,340,624
JBrowse link
G RHOB ras homolog family member B involved_in ISO (PMID:21347332) BHF-UCL PMID:21347332 NCBI chr17:15,438,744...15,439,793
Ensembl chr17:15,439,143...15,441,136
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin acts_upstream_of_or_within ISO (MGI:3703920|PMID:17369357) MGI PMID:17369357 MGI:3703920 NCBI chr13:62,925,761...62,936,753
Ensembl chr13:62,926,301...62,936,738
JBrowse link
G ESR1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3629536|PMID:12021201) Ensembl
Ensembl
MGI
PMID:12021201 GO_REF:0000107 MGI:3629536 NCBI chr 1:42,081,952...42,368,544
Ensembl chr 1:42,081,969...42,368,544
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:4422106 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3761053|PMID:17898001) MGI
Ensembl
Ensembl
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
epithelial cell proliferation involved in renal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 acts_upstream_of_or_within ISO (MGI:5581372|PMID:24680895) MGI PMID:24680895 MGI:5581372 NCBI chr21:47,952,019...47,995,530
Ensembl chr21:47,952,890...47,996,288
JBrowse link
G LGR5 leucine rich repeat containing G protein-coupled receptor 5 acts_upstream_of_or_within ISO (MGI:5581372|PMID:24680895) MGI PMID:24680895 MGI:5581372 NCBI chr10:13,009,028...13,136,685
Ensembl chr10:13,007,843...13,136,998
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852
JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:22,633,001...22,794,960
Ensembl chr13:22,635,230...22,794,453
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:8674409) RGD
Ensembl
MGI
PMID:8674409 PMID:8769111 GO_REF:0000107 RGD:2306315 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3773938|PMID:18231602)
(MGI:3801531|PMID:18533146)
MGI PMID:18231602 PMID:18533146 MGI:3773938 MGI:3801531 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G CTSD cathepsin D NOT|involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr18:46,010,440...46,019,457
Ensembl chr18:46,010,440...46,019,457
JBrowse link
G CTSL3 cathepsin L family member 3 NOT|involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr 1:72,215,774...72,219,093 JBrowse link
G CTSZ cathepsin Z acts_upstream_of_or_within ISO (PMID:17500053) UniProt PMID:17500053 NCBI chr24:43,743,291...43,750,154
Ensembl chr24:43,743,294...43,754,424
JBrowse link
G DAG1 dystroglycan 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2156962|PMID:11798066) Ensembl
Ensembl
MGI
PMID:11798066 GO_REF:0000107 MGI:2156962 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO (MGI:5487693|PMID:23466739) MGI PMID:23466739 MGI:5487693 NCBI chr 4:27,687,223...27,780,007
Ensembl chr 4:27,687,287...27,806,722
JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO (MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:5699497 NCBI chr29:39,322,516...39,388,363
Ensembl chr29:39,333,117...39,387,337
JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5699497|PMID:26371508) Ensembl
Ensembl
MGI
PMID:26371508 GO_REF:0000107 MGI:5699497 NCBI chr 5:81,287,330...81,297,533
Ensembl chr 5:81,287,425...81,295,353
JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5912649|PMID:28859094) MGI
Ensembl
PMID:28859094 GO_REF:0000107 MGI:5912649 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1309706|PMID:9784490)
(MGI:3578606|PMID:15800000)
(MGI:1327513|PMID:9916808)
(MGI:3716020|PMID:17560563)
(MGI:1101385|PMID:9428423), (MGI:3609523|PMID:16169547), (MGI:3613102|PMID:16375885)
MGI
Ensembl
PMID:9428423 PMID:9784490 PMID:9916808 PMID:15800000 PMID:16169547 More... GO_REF:0000107 MGI:1101385 MGI:1309706 MGI:1327513 MGI:3578606 MGI:3609523 MGI:3613102 MGI:3716020 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:5523405 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
G FOXA1 forkhead box A1 acts_upstream_of_or_within ISO (MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:3579763 NCBI chr 8:16,072,629...16,083,105
Ensembl chr 8:16,079,140...16,083,807
JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:3579763 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G FOXF1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:2135612|PMID:11493558) MGI PMID:11493558 MGI:2135612 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935
JBrowse link
G HHIP hedgehog interacting protein acts_upstream_of_or_within ISO (MGI:2450020|PMID:12569124) MGI PMID:12569124 MGI:2450020 NCBI chr15:43,432,464...43,525,973
Ensembl chr15:43,431,650...43,520,861
JBrowse link
G HMGA2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:5638831|PMID:24661562) MGI PMID:24661562 MGI:5638831 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HOXA5 homeobox A5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1195049|PMID:9441679) MGI
Ensembl
Ensembl
PMID:9441679 GO_REF:0000107 MGI:1195049 NCBI chr14:40,315,409...40,319,001
Ensembl chr14:40,315,639...40,317,768
JBrowse link
G KRAS KRAS proto-oncogene, GTPase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5523405|PMID:24058167) MGI
Ensembl
PMID:24058167 GO_REF:0000107 MGI:5523405 NCBI chr27:22,261,753...22,296,704
Ensembl chr27:22,257,941...22,293,369
JBrowse link
G LAMA1 laminin subunit alpha 1 acts_upstream_of_or_within ISO (MGI:2156962|PMID:11798066), (MGI:80991|PMID:1907584) MGI PMID:1907584 PMID:11798066 MGI:2156962 MGI:80991 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in ISO (PMID:8675988) UniProt PMID:8675988
G RSPO2 R-spondin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3774879|PMID:18256198) MGI
Ensembl
Ensembl
PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chr13:8,610,227...8,755,727
Ensembl chr13:8,611,952...8,754,859
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1277744|PMID:9731532), (MGI:1346236|PMID:10500184) RGD
MGI
PMID:8769111 PMID:9731532 PMID:10500184 MGI:1277744 MGI:1346236 RGD:2306315 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3795352|PMID:18374910) MGI PMID:18374910 MGI:3795352 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:5523405 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736
JBrowse link
epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PODXL podocalyxin like involved_in IDA (PMID:15814834) UniProt
UniProt
PMID:15814834 NCBI chr14:5,614,006...5,625,360
Ensembl chr14:5,590,478...5,625,360
JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTHRC1 collagen triple helix repeat containing 1 acts_upstream_of_or_within ISO (MGI:3814781|PMID:18606138) MGI PMID:18606138 MGI:3814781 NCBI chr13:4,801,049...4,811,565
Ensembl chr13:4,805,577...4,811,282
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3814781|PMID:18606138) MGI PMID:18606138 MGI:3814781 NCBI chr38:21,822,873...21,824,537 JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351
JBrowse link
G APLNR apelin receptor involved_in ISO (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055 NCBI chr18:38,878,621...38,882,280
Ensembl chr18:38,878,947...38,886,206
JBrowse link
G ARL13B ADP ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO (MGI:5430243|PMID:22554696) MGI PMID:22554696 MGI:5430243 NCBI chr33:1,698,360...1,762,846
Ensembl chr33:1,698,363...1,761,641
JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:63,008,206...63,051,809
Ensembl chr 8:63,008,575...63,051,581
JBrowse link
G CCDC103 coiled-coil domain containing 103 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:18,581,544...18,585,939
Ensembl chr 9:18,582,468...18,584,612
JBrowse link
G CCDC39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (MGI:3574743|PMID:15750185) MGI PMID:15750185 MGI:3574743 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within ISO (MGI:5509110|PMID:23742838) MGI PMID:23742838 MGI:5509110 NCBI chr 6:37,708,258...37,746,361
Ensembl chr 6:37,708,089...37,746,398
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656
JBrowse link
G ENG endoglin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:55,558,246...55,590,081
Ensembl chr 9:55,558,305...55,589,064
JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:1340887|PMID:10411502) MGI PMID:10411502 MGI:1340887 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FOXH1 forkhead box H1 involved_in ISO (MGI:3055632|PMID:15363409) BHF-UCL PMID:15363409 MGI:3055632 NCBI chr13:37,883,554...37,887,324
Ensembl chr13:37,882,687...37,885,319
JBrowse link
G GATA4 GATA binding protein 4 involved_in ISO (MGI:3052615|PMID:15310850) BHF-UCL PMID:15310850 MGI:3052615 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989
JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:1201220|PMID:9486664) MGI PMID:9486664 MGI:1201220 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936
JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1197800|PMID:9500551) Ensembl
Ensembl
MGI
PMID:9500551 GO_REF:0000107 MGI:1197800 NCBI chr 4:55,231,061...55,234,640
Ensembl chr 4:55,231,481...55,234,265
JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (MGI:892134|PMID:9171826) MGI PMID:9171826 MGI:892134 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3607736|PMID:14659802) Ensembl
Ensembl
MGI
PMID:14659802 GO_REF:0000107 MGI:3607736 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828200|PMID:18930042) Ensembl
Ensembl
MGI
PMID:18930042 GO_REF:0000107 MGI:3828200 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796
JBrowse link
G IFT52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) MGI PMID:15930098 MGI:3579954 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808
JBrowse link
G IFT57 intraflagellar transport 57 acts_upstream_of_or_within ISO (MGI:3703110|PMID:17027958) MGI PMID:17027958 MGI:3703110 NCBI chr33:13,432,902...13,486,692
Ensembl chr33:13,410,544...13,486,612
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in ISO (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr37:25,616,942...25,622,989 JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127
JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (MGI:1337724|PMID:10330409) MGI PMID:10330409 MGI:1337724 NCBI chr11:20,988,516...21,044,151
Ensembl chr11:20,928,655...21,044,090
JBrowse link
G LBX1 ladybird homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3628723|PMID:12522123) MGI
Ensembl
Ensembl
PMID:12522123 GO_REF:0000107 MGI:3628723 NCBI chr28:13,872,846...13,875,521
Ensembl chr28:13,873,727...13,875,486
JBrowse link
G LOC609557 cryptic protein acts_upstream_of_or_within ISO (MGI:1346729|PMID:10521397) MGI PMID:10521397 MGI:1346729 NCBI chr19:20,318,937...20,384,369 JBrowse link
G LOC609612 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:25,944,350...25,951,010 JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755
JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (MGI:3603078|PMID:16000382) MGI PMID:16000382 MGI:3603078 NCBI chr 7:66,173,414...66,289,477
Ensembl chr 7:66,178,594...66,289,491
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74918|PMID:7628699), (MGI:892786|PMID:9192865)
(MGI:3773736|PMID:16510504)
Ensembl
Ensembl
MGI
PMID:7628699 PMID:9192865 PMID:16510504 GO_REF:0000107 MGI:3773736 MGI:74918 MGI:892786 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624254|PMID:16496285) MGI
Ensembl
PMID:16496285 GO_REF:0000107 MGI:3624254 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G NOTCH2 notch receptor 2 involved_in ISO (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857
JBrowse link
G NOTO notochord homeobox acts_upstream_of_or_within ISO (MGI:5646191|PMID:17884984) MGI PMID:17884984 MGI:5646191
G NPHP3 nephrocystin 3 involved_in ISO (PMID:18371931), (PMID:20007846) BHF-UCL PMID:18371931 PMID:20007846 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805
JBrowse link
G OVOL2 ovo like zinc finger 2 acts_upstream_of_or_within ISO (MGI:3776202|PMID:17573777) MGI PMID:17573777 MGI:3776202 NCBI chr24:5,020,608...5,050,487
Ensembl chr24:5,020,813...5,050,309
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) BHF-UCL PMID:21719175 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1347695|PMID:10557208) Ensembl
Ensembl
MGI
PMID:10557208 GO_REF:0000107 MGI:1347695 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1340887|PMID:10411502), (MGI:1346236|PMID:10500184) Ensembl
MGI
PMID:10411502 PMID:10500184 GO_REF:0000107 MGI:1340887 MGI:1346236 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SMAD3 SMAD family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618021|PMID:15183723) MGI
Ensembl
PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337
JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G SOX17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in
ISO (MGI:3716256|PMID:17610846)
(MGI:3716378|PMID:17655922)
MGI
UniProt
PMID:17610846 PMID:17655922 MGI:3716256 MGI:3716378 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603734|PMID:15929941) Ensembl
Ensembl
MGI
PMID:15929941 GO_REF:0000107 MGI:3603734 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (MGI:1339521|PMID:10385121) MGI PMID:10385121 MGI:1339521 NCBI chr15:13,369,292...13,431,677
Ensembl chr15:13,371,925...13,430,951
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604917|PMID:16155214) Ensembl
Ensembl
MGI
PMID:16155214 GO_REF:0000107 MGI:3604917 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389
JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736
JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3578601|PMID:15843407)
(MGI:3579960|PMID:15901664)
GO_Central
Ensembl
MGI
PMID:15843407 PMID:15901664 PMID:21873635 GO_REF:0000107 MGI:3578601 MGI:3579960 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507
JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:4412356|PMID:18723448)
(PMID:21873635)
(MGI:3769096|PMID:17460765)
MGI
GO_Central
PMID:17460765 PMID:18723448 PMID:21873635 MGI:3769096 MGI:4412356 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918
JBrowse link
G TBX6 T-box transcription factor 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:18,093,201...18,098,592
Ensembl chr 6:18,093,189...18,097,636
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (MGI:4453264|PMID:20178780) MGI PMID:20178780 MGI:4453264 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459
JBrowse link
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISO (MGI:2157686|PMID:11440971) UniProt PMID:11440971 MGI:2157686 NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3611726|PMID:16291790) MGI PMID:16291790 MGI:3611726 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413372|PMID:19795512) MGI
Ensembl
Ensembl
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624254|PMID:16496285)
(MGI:3056222|PMID:15384171)
Ensembl
MGI
PMID:15384171 PMID:16496285 GO_REF:0000107 MGI:3056222 MGI:3624254 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
initiation of neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM2B lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr38:21,822,873...21,824,537 JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor acts_upstream_of_or_within ISO (MGI:2683859|PMID:14676301) MGI PMID:14676301 MGI:2683859 NCBI chr24:34,713,390...34,731,461
NCBI chr  X:51,969,785...52,167,450
Ensembl chr  X:51,969,785...52,151,912
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3761053|PMID:17898001) MGI
Ensembl
Ensembl
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:4361775|PMID:19805295)
(MGI:4360856|PMID:19686689)
MGI PMID:19686689 PMID:19805295 MGI:4360856 MGI:4361775 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G WNT2 Wnt family member 2 acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069
JBrowse link
G WNT2B Wnt family member 2B acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956
JBrowse link
mammary duct terminal end bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSF1 colony stimulating factor 1 acts_upstream_of_or_within ISO (MGI:3640884|PMID:10804170) MGI PMID:10804170 MGI:3640884 NCBI chr 6:42,028,454...42,047,028
Ensembl chr 6:42,034,149...42,049,371
JBrowse link
G KDM5B lysine demethylase 5B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5619178|PMID:24802759) MGI
Ensembl
PMID:24802759 GO_REF:0000107 MGI:5619178 NCBI chr 7:336,452...415,568
Ensembl chr 7:330,705...412,386
JBrowse link
G MST1 macrophage stimulating 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5614192|PMID:25049204) MGI
Ensembl
PMID:25049204 GO_REF:0000107 MGI:5614192 NCBI chr20:39,582,237...39,586,958
Ensembl chr20:39,582,282...39,586,908
JBrowse link
G ROBO1 roundabout guidance receptor 1 acts_upstream_of_or_within ISO (MGI:3617129|PMID:16439476) MGI PMID:16439476 MGI:3617129 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728
JBrowse link
G SLC12A2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:2180453|PMID:12040017) MGI PMID:12040017 MGI:2180453 NCBI chr11:17,143,943...17,256,248
Ensembl chr11:17,143,943...17,253,695
JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within ISO (MGI:3617129|PMID:16439476) MGI PMID:16439476 MGI:3617129 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSMD1 CUB and Sushi multiple domains 1 acts_upstream_of_or_within ISO (MGI:6369467|PMID:31604923) MGI PMID:31604923 MGI:6369467 NCBI chr16:55,142,990...56,673,978
Ensembl chr16:55,143,199...56,673,679
JBrowse link
G ESR1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1926565|PMID:10919287) Ensembl
Ensembl
MGI
PMID:10919287 GO_REF:0000107 MGI:1926565 NCBI chr 1:42,081,952...42,368,544
Ensembl chr 1:42,081,969...42,368,544
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349
JBrowse link
G VDR vitamin D receptor acts_upstream_of_or_within ISO (MGI:3051725|PMID:15178742) MGI PMID:15178742 MGI:3051725 NCBI chr27:6,852,915...6,909,466
Ensembl chr27:6,852,723...6,909,470
JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin acts_upstream_of_or_within ISO (MGI:1336843|PMID:10331984), (MGI:3703920|PMID:17369357) MGI PMID:10331984 PMID:17369357 MGI:1336843 MGI:3703920 NCBI chr13:62,925,761...62,936,753
Ensembl chr13:62,926,301...62,936,738
JBrowse link
G B9D2 B9 domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3814777|PMID:18614704) MGI
Ensembl
PMID:18614704 GO_REF:0000107 MGI:3814777 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3576991|PMID:15647257) Ensembl
MGI
PMID:15647257 GO_REF:0000107 MGI:3576991 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349
JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (MGI:1859522|PMID:11015591) MGI PMID:11015591 MGI:1859522 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674
JBrowse link
G PHB2 prohibitin 2 acts_upstream_of_or_within ISO (MGI:3695669|PMID:17065319) MGI PMID:17065319 MGI:3695669 NCBI chr27:38,075,769...38,080,440
Ensembl chr27:38,075,652...38,080,109
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3761053|PMID:17898001) MGI
Ensembl
Ensembl
PMID:17898001 GO_REF:0000107 MGI:3761053 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
mammary gland bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTHLH parathyroid hormone like hormone acts_upstream_of_or_within ISO (MGI:1203302|PMID:9477327) MGI PMID:9477327 MGI:1203302 NCBI chr27:19,781,557...19,795,078
Ensembl chr27:19,781,557...19,795,078
JBrowse link
mammary gland bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155478|PMID:11782400) Ensembl
Ensembl
MGI
PMID:11782400 GO_REF:0000107 MGI:2155478 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:2155478|PMID:11782400) MGI
UniProt
PMID:11782400 GO_REF:0000024 MGI:2155478 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
mammary gland bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOSTDC1 sclerostin domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5319554|PMID:22509524) Ensembl
Ensembl
MGI
PMID:22509524 GO_REF:0000107 MGI:5319554 NCBI chr14:31,035,759...31,079,139
Ensembl chr14:31,022,766...31,026,737
Ensembl chr14:31,022,766...31,026,737
JBrowse link
mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (MGI:2151643|PMID:11783999) MGI PMID:11783999 MGI:2151643 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658
JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3758540|PMID:12198239) MGI
Ensembl
PMID:12198239 GO_REF:0000107 MGI:3758540 NCBI chr 2:38,124,568...38,242,510
Ensembl chr 2:38,123,190...38,240,755
JBrowse link
G NTN1 netrin 1 acts_upstream_of_or_within ISO (MGI:3617129|PMID:16439476) MGI PMID:16439476 MGI:3617129 NCBI chr 5:33,654,723...33,825,832
Ensembl chr 5:33,637,142...33,825,899
JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within ISO (MGI:1346456|PMID:10529434) MGI PMID:10529434 MGI:1346456 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662
JBrowse link
G SCRIB scribble planar cell polarity protein involved_in ISO (MGI:4359580|PMID:19041750) UniProt PMID:19041750 MGI:4359580 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681
JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within ISO (MGI:3617129|PMID:16439476) MGI PMID:16439476 MGI:3617129 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430439|PMID:20040500) Ensembl
Ensembl
MGI
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
G MIR216A microRNA mir-216a involved_in ISO (MGI:6359623|PMID:31367007) MGI PMID:31367007 MGI:6359623 NCBI chr10:56,761,430...56,761,534
Ensembl chr10:56,761,430...56,761,534
JBrowse link
G MIR216B microRNA mir-216b involved_in ISO (MGI:6359623|PMID:31367007) MGI PMID:31367007 MGI:6359623 NCBI chr10:56,772,853...56,772,914
Ensembl chr10:56,772,853...56,772,914
JBrowse link
G MIR217 microRNA mir-217 involved_in ISO (MGI:6359623|PMID:31367007) MGI PMID:31367007 MGI:6359623 NCBI chr10:56,754,566...56,754,647
Ensembl chr10:56,754,566...56,754,647
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
mesonephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPC3 glypican 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1931343|PMID:11180950) MGI
Ensembl
PMID:11180950 GO_REF:0000107 MGI:1931343 NCBI chr  X:104,313,426...104,751,215
Ensembl chr  X:104,313,591...104,751,756
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228
JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G SIX1 SIX homeobox 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr 6:38,811,051...38,865,503
Ensembl chr 6:38,837,964...38,865,503
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:4939090|PMID:21212101) MGI PMID:21212101 MGI:4939090 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:4939090|PMID:21212101) UniProt
UniProt
MGI
PMID:21212101 GO_REF:0000024 MGI:4939090 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:15465493) UniProt PMID:15465493
G HES5 hes family bHLH transcription factor 5 acts_upstream_of_or_within ISO (PMID:15465493) UniProt PMID:15465493 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr21:47,952,019...47,995,530
Ensembl chr21:47,952,890...47,996,288
JBrowse link
metanephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4950307|PMID:21350016) MGI
Ensembl
PMID:21350016 GO_REF:0000107 MGI:4950307 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4950307|PMID:21350016) Ensembl
MGI
PMID:21350016 GO_REF:0000107 MGI:4950307 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
metanephric tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCR2 C-X-C motif chemokine receptor 2 ISO RGD PMID:17634442 RGD:7257700 NCBI chr37:24,831,351...24,846,387
Ensembl chr37:24,843,171...24,844,247
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNF tumor necrosis factor involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4949995|PMID:21281623) Ensembl
Ensembl
MGI
PMID:21281623 GO_REF:0000107 MGI:4949995 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISO (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chr 5:51,122,469...51,123,753 JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
nephric duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430449|PMID:19913010) MGI
Ensembl
PMID:19913010 GO_REF:0000107 MGI:4430449 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
nephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EFNB2 ephrin B2 acts_upstream_of_or_within ISO (MGI:5604037|PMID:25139858) MGI PMID:25139858 MGI:5604037 NCBI chr22:55,567,992...55,609,210
Ensembl chr22:55,566,039...55,609,443
JBrowse link
G EPHA4 EPH receptor A4 acts_upstream_of_or_within ISO (MGI:5604037|PMID:25139858) MGI PMID:25139858 MGI:5604037 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646
JBrowse link
G EPHA7 EPH receptor A7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5604037|PMID:25139858) Ensembl
MGI
PMID:25139858 GO_REF:0000107 MGI:5604037 NCBI chr12:52,134,775...52,305,163
Ensembl chr12:52,137,605...52,305,162
JBrowse link
G GATA3 GATA binding protein 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3714576|PMID:17537789) MGI PMID:17537789 MGI:3714576 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G WNT6 Wnt family member 6 acts_upstream_of_or_within ISO (MGI:2178881|PMID:11948913) MGI PMID:11948913 MGI:2178881 NCBI chr37:25,452,875...25,457,437
Ensembl chr37:25,453,905...25,456,654
JBrowse link
nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT9B Wnt family member 9B acts_upstream_of_or_within ISO (MGI:4353952|PMID:19543268) MGI PMID:19543268 MGI:4353952 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
neural fold bending term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LUZP1 leucine zipper protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3818102|PMID:18801334)
GO_Central
MGI
PMID:18801334 PMID:21873635 MGI:3818102 NCBI chr 2:76,242,226...76,312,361
Ensembl chr 2:76,242,572...76,309,688
JBrowse link
neural fold elevation formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP5 bone morphogenetic protein 5 involved_in ISO (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr12:23,089,429...23,202,176
Ensembl chr12:23,089,459...23,202,348
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in ISO (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1337194|PMID:10328919) Ensembl
Ensembl
MGI
PMID:10328919 GO_REF:0000107 MGI:1337194 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
neural fold formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CECR2 CECR2 histone acetyl-lysine reader acts_upstream_of_or_within ISO (MGI:4880797|PMID:21246654) MGI PMID:21246654 MGI:4880797 NCBI chr27:45,125,909...45,193,577
Ensembl chr27:45,125,723...45,188,890
JBrowse link
G CFL1 cofilin 1 acts_upstream_of_or_within ISO (MGI:3530675|PMID:15649475) MGI PMID:15649475 MGI:3530675 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212
JBrowse link
G GATAD2A GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (MGI:3762244|PMID:17565372) MGI PMID:17565372 MGI:3762244 NCBI chr20:43,736,471...43,853,505
Ensembl chr20:43,739,849...43,846,370
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2155575|PMID:11311163) MGI
Ensembl
PMID:11311163 GO_REF:0000107 MGI:2155575 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G OVOL2 ovo like zinc finger 2 acts_upstream_of_or_within ISO (MGI:3618450|PMID:16423343) MGI PMID:16423343 MGI:3618450 NCBI chr24:5,020,608...5,050,487
Ensembl chr24:5,020,813...5,050,309
JBrowse link
neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:1327082|PMID:9883720) MGI PMID:9883720 MGI:1327082 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:1327082|PMID:9883720) MGI PMID:9883720 MGI:1327082 NCBI chr 7:20,696,659...20,735,362
Ensembl chr 7:20,700,144...20,727,410
JBrowse link
G ADM adrenomedullin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3689296|PMID:16981008) MGI
Ensembl
PMID:16981008 GO_REF:0000107 MGI:3689296 NCBI chr21:33,472,197...33,474,472
Ensembl chr21:33,471,623...33,474,495
JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (MGI:81193|PMID:8673125) MGI PMID:8673125 MGI:81193 NCBI chr15:26,838,615...26,858,786
Ensembl chr15:26,834,670...26,858,803
JBrowse link
G APAF1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2149166|PMID:11504943), (MGI:893797|PMID:9216040) MGI
Ensembl
Ensembl
PMID:9216040 PMID:11504943 GO_REF:0000107 MGI:2149166 MGI:893797 NCBI chr15:38,026,893...38,160,842
Ensembl chr15:38,028,132...38,114,987
JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1926242|PMID:11044403) Ensembl
Ensembl
MGI
PMID:11044403 GO_REF:0000107 MGI:1926242 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337
JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:5466629|PMID:23129809) MGI PMID:23129809 MGI:5466629 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102
JBrowse link
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (MGI:3607949|PMID:16170314) MGI PMID:16170314 MGI:3607949 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381
JBrowse link
G B9D2 B9 domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:62,712,937...62,723,852
Ensembl chr 6:62,712,971...62,722,368
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4429763|PMID:19850029) Ensembl
Ensembl
MGI
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G BRD2 bromodomain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6120662|PMID:19362612) Ensembl
Ensembl
MGI
PMID:19362612 GO_REF:0000107 MGI:6120662 NCBI chr12:2,534,034...2,546,029
Ensembl chr12:2,534,034...2,546,029
JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO (MGI:5696765|PMID:24947469) MGI PMID:24947469 MGI:5696765 NCBI chr 3:64,731,165...64,867,743
Ensembl chr 3:64,731,171...64,867,547
JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (MGI:5912686|PMID:28817564) MGI PMID:28817564 MGI:5912686 NCBI chr 1:97,623,126...97,662,668
Ensembl chr 1:97,622,998...97,662,662
JBrowse link
G CECR2 CECR2 histone acetyl-lysine reader acts_upstream_of_or_within ISO (MGI:3530173|PMID:15640247)
(MGI:4822542|PMID:20589882)
(MGI:4880797|PMID:21246654)
MGI PMID:15640247 PMID:20589882 PMID:21246654 MGI:3530173 MGI:4822542 MGI:4880797 NCBI chr27:45,125,909...45,193,577
Ensembl chr27:45,125,723...45,188,890
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
ISO (MGI:2667273|PMID:12842012)
(MGI:3703464|PMID:17229766)
UniProt
MGI
PMID:12842012 PMID:17229766 MGI:2667273 MGI:3703464 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (MGI:2384266|PMID:12149478) MGI PMID:12149478 MGI:2384266 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within ISO (MGI:5509110|PMID:23742838) MGI PMID:23742838 MGI:5509110 NCBI chr 6:37,708,258...37,746,361
Ensembl chr 6:37,708,089...37,746,398
JBrowse link
G COBL cordon-bleu WH2 repeat protein acts_upstream_of_or_within ISO (MGI:2676511|PMID:14512015) MGI PMID:14512015 MGI:2676511 NCBI chr18:2,206,957...2,386,333
Ensembl chr18:2,208,260...2,459,206
JBrowse link
G DEAF1 DEAF1 transcription factor involved_in ISO (MGI:3029622|PMID:14966286) UniProt PMID:14966286 MGI:3029622 NCBI chr18:25,711,683...25,733,144
Ensembl chr18:25,711,706...25,733,069
JBrowse link
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (MGI:3529660|PMID:15710412) MGI PMID:15710412 MGI:3529660 NCBI chr16:36,531,754...36,943,033
Ensembl chr16:36,531,754...36,943,033
JBrowse link
G DVL2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2389015|PMID:12421720) MGI
Ensembl
PMID:12421720 GO_REF:0000107 MGI:2389015 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857
JBrowse link
G ENAH ENAH actin regulator acts_upstream_of_or_within ISO (MGI:1331576|PMID:10069337)
(MGI:3054149|PMID:15371503)
MGI PMID:10069337 PMID:15371503 MGI:1331576 MGI:3054149 NCBI chr 7:39,105,024...39,250,126
Ensembl chr 7:39,105,039...39,247,595
JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367921|PMID:19877275) Ensembl
MGI
PMID:19877275 GO_REF:0000107 MGI:4367921 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699
JBrowse link
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3616416|PMID:16495441) Ensembl
Ensembl
MGI
PMID:16495441 GO_REF:0000107 MGI:3616416 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851
JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3616416|PMID:16495441) MGI
Ensembl
Ensembl
PMID:16495441 GO_REF:0000107 MGI:3616416 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115
JBrowse link
G GLMN glomulin, FKBP associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5320488|PMID:22405651) Ensembl
MGI
PMID:22405651 GO_REF:0000107 MGI:5320488 NCBI chr 6:56,631,186...56,678,397
Ensembl chr 6:56,644,456...56,678,399
JBrowse link
G GRHL2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in
ISO (MGI:4947318|PMID:21262862)
(MGI:4835348|PMID:20654612), (MGI:4867118|PMID:20978075)
MGI
UniProt
PMID:20654612 PMID:20978075 PMID:21262862 MGI:4835348 MGI:4867118 MGI:4947318 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496
JBrowse link
G HECTD1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in
ISO (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804)
(MGI:3714713|PMID:17442300)
MGI
UniProt
PMID:9636176 PMID:15755804 PMID:17442300 MGI:1267118 MGI:3577662 MGI:3714713 NCBI chr 8:10,399,183...10,493,074
Ensembl chr 8:10,400,604...10,491,247
JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906
JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828200|PMID:18930042) Ensembl
Ensembl
MGI
PMID:18930042 GO_REF:0000107 MGI:3828200 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796
JBrowse link
G IFT57 intraflagellar transport 57 acts_upstream_of_or_within ISO (MGI:3703110|PMID:17027958) MGI PMID:17027958 MGI:3703110 NCBI chr33:13,432,902...13,486,692
Ensembl chr33:13,410,544...13,486,612
JBrowse link
G KAT2A lysine acetyltransferase 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709911|PMID:17325035) MGI
Ensembl
Ensembl
PMID:17325035 GO_REF:0000107 MGI:3709911 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067
JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127
JBrowse link
G KDM6A lysine demethylase 6A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5448135|PMID:22949634) MGI
Ensembl
Ensembl
PMID:22949634 GO_REF:0000107 MGI:5448135 NCBI chr  X:38,745,854...38,964,029
Ensembl chr  X:38,745,854...38,959,842
JBrowse link
G KIF20B kinesin family member 20B acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chr28:4,589,691...4,670,335
Ensembl chr28:4,589,434...4,670,164
JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2154554|PMID:11719201) Ensembl
Ensembl
MGI
PMID:11719201 GO_REF:0000107 MGI:2154554 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883
JBrowse link
G LIAS lipoic acid synthetase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577662|PMID:15755804) MGI
Ensembl
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chr 3:72,973,527...72,989,522
Ensembl chr 3:72,949,512...72,989,487
JBrowse link
G LMO4 LIM domain only 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3573996|PMID:15691703)
(MGI:3029621|PMID:14966285)
Ensembl
MGI
PMID:14966285 PMID:15691703 GO_REF:0000107 MGI:3029621 MGI:3573996 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058
JBrowse link
G LRP2 LDL receptor related protein 2 involved_in ISO (MGI:5603707|PMID:24639464) UniProt PMID:24639464 MGI:5603707 NCBI chr36:13,910,450...14,107,081
Ensembl chr36:13,911,865...14,107,546
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3055483|PMID:15469977)
(MGI:4413396|PMID:19653321)
(MGI:4413372|PMID:19795512)
(MGI:1347661|PMID:10545599)
MGI PMID:10545599 PMID:15469977 PMID:19653321 PMID:19795512 MGI:1347661 MGI:3055483 MGI:4413372 MGI:4413396 MGI:61254 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within ISO (MGI:4839483|PMID:20630950) MGI PMID:20630950 MGI:4839483 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992
JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367169|PMID:19776033)
(MGI:5487695|PMID:23454480)
Ensembl
Ensembl
MGI
PMID:19776033 PMID:23454480 GO_REF:0000107 MGI:4367169 MGI:5487695 NCBI chr 9:32,865,972...32,878,712
Ensembl chr 9:32,860,995...32,879,338
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:38,831,672...38,889,607
Ensembl chr 8:38,831,860...38,889,453
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in ISO (MGI:5468075|PMID:23267094) BHF-UCL PMID:23267094 MGI:5468075 NCBI chr 1:41,316,247...41,495,226
Ensembl chr 1:41,309,419...41,495,216
JBrowse link
G MTHFR methylenetetrahydrofolate reductase acts_upstream_of ISO (PMID:25855017), (PMID:29222906) BHF-UCL PMID:25855017 PMID:29222906 NCBI chr 2:84,445,526...84,457,435
Ensembl chr 2:84,380,919...84,536,818
JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640733|PMID:16712836) Ensembl
MGI
PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:31,455,389...31,456,057 JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chr23:52,068,123...52,154,410
Ensembl chr23:52,068,118...52,151,593
JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chr37:28,346,476...28,443,648
Ensembl chr37:28,346,563...28,444,561
JBrowse link
G PFN1 profilin 1 acts_upstream_of_or_within ISO (MGI:1331576|PMID:10069337) MGI PMID:10069337 MGI:1331576 NCBI chr 5:31,670,483...31,671,891
Ensembl chr 5:31,670,194...31,671,895
JBrowse link
G PHACTR4 phosphatase and actin regulator 4 involved_in IEA UniProt
Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 2:71,982,524...72,079,916
Ensembl chr 2:71,984,730...72,080,194
JBrowse link
G PLXNB2 plexin B2 involved_in ISO (MGI:3712712|PMID:17554007) UniProt PMID:17554007 MGI:3712712 NCBI chr10:16,949,230...16,975,109
Ensembl chr10:16,963,396...16,974,705
JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:5308523|PMID:22007132) MGI PMID:22007132 MGI:5308523 NCBI chr20:48,416,730...48,425,237
Ensembl chr20:48,409,045...48,426,669
JBrowse link
G PRKACB protein kinase cAMP-activated catalytic subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5308523|PMID:22007132) Ensembl
Ensembl
MGI
PMID:22007132 GO_REF:0000107 MGI:5308523 NCBI chr 6:63,615,445...63,729,386
Ensembl chr 6:63,618,323...63,730,146
JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within ISO (MGI:1095757|PMID:9262482) MGI PMID:9262482 MGI:1095757 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046397|PMID:15229603)
(MGI:4830023|PMID:20704721)
MGI
Ensembl
PMID:15229603 PMID:20704721 GO_REF:0000107 MGI:3046397 MGI:4830023 NCBI chr12:11,593,017...11,657,149
Ensembl chr12:11,593,043...11,656,320
JBrowse link
G RAB23 RAB23, member RAS oncogene family acts_upstream_of_or_within
involved_in
ISO (MGI:1267118|PMID:9636176)
(MGI:69552|PMID:7720556)
MGI
UniProt
PMID:7720556 PMID:9636176 MGI:1267118 MGI:69552 NCBI chr12:24,388,530...24,438,956
Ensembl chr12:24,387,643...24,421,869
JBrowse link
G RALA RAS like proto-oncogene A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:10,022,490...10,047,583
Ensembl chr18:10,024,311...10,039,183
JBrowse link
G RARA retinoic acid receptor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:69060|PMID:7607067) MGI
Ensembl
Ensembl
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr 9:22,254,803...22,298,614
Ensembl chr 9:22,254,806...22,289,459
JBrowse link
G RARG retinoic acid receptor gamma acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:69060|PMID:7607067) MGI
Ensembl
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr27:1,958,432...1,978,471
Ensembl chr27:1,958,204...1,978,476
JBrowse link
G RGMA repulsive guidance molecule BMP co-receptor a acts_upstream_of_or_within ISO (MGI:3027667|PMID:14749425) MGI PMID:14749425 MGI:3027667 NCBI chr 3:47,044,342...47,089,923
Ensembl chr 3:47,061,910...47,089,294
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 acts_upstream_of_or_within ISO (MGI:3703464|PMID:17229766) MGI PMID:17229766 MGI:3703464 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707
JBrowse link
G RPS7 ribosomal protein S7 acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chr17:2,139,011...2,143,160
Ensembl chr17:2,138,779...2,143,178
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:3698636|PMID:16790473) MGI PMID:16790473 MGI:3698636 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G SALL4 spalt like transcription factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3698636|PMID:16790473) Ensembl
Ensembl
MGI
PMID:16790473 GO_REF:0000107 MGI:3698636 NCBI chr24:37,941,498...37,959,713
Ensembl chr24:37,940,034...38,037,287
JBrowse link
G SCRIB scribble planar cell polarity protein acts_upstream_of_or_within
involved_in
ISO (MGI:5050793|PMID:21515572)
(PMID:22095531)
(MGI:4819429|PMID:20643356)
MGI
UniProt
PMID:20643356 PMID:21515572 PMID:22095531 MGI:4819429 MGI:5050793 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681
JBrowse link
G SDC4 syndecan 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5498591|PMID:23760952) Ensembl
Ensembl
MGI
PMID:23760952 GO_REF:0000107 MGI:5498591 NCBI chr24:32,628,704...32,648,809
Ensembl chr24:32,630,437...32,649,114
JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (MGI:4438817|PMID:19966784)
(MGI:4439427|PMID:20215345)
MGI PMID:19966784 PMID:20215345 MGI:4438817 MGI:4439427 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192
JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:45,105,701...45,116,504
Ensembl chr10:45,106,666...45,115,592
JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4431136|PMID:20133625) Ensembl
Ensembl
MGI
PMID:20133625 GO_REF:0000107 MGI:4431136 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:4429763|PMID:19850029) MGI PMID:19850029 MGI:4429763 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4429763|PMID:19850029) MGI
Ensembl
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SHROOM3 shroom family member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610718|PMID:16249236) MGI
InterPro
InterPro
PMID:16249236 GO_REF:0000002 MGI:3610718 NCBI chr32:1,218,513...1,392,014
Ensembl chr32:1,271,392...1,391,798
JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:1095997|PMID:9284043) MGI PMID:9284043 MGI:1095997 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403
JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4360135|PMID:19592578) MGI
Ensembl
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chr30:7,976,094...7,989,019
Ensembl chr30:7,975,235...7,988,339
JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360135|PMID:19592578) Ensembl
MGI
Ensembl
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chr 1:114,699,050...114,727,802
Ensembl chr 1:114,699,241...114,727,763
JBrowse link
G ST14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO (MGI:4360135|PMID:19592578) MGI PMID:19592578 MGI:4360135 NCBI chr 5:4,652,493...4,666,728
Ensembl chr 5:4,651,863...4,691,069
JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (MGI:1339521|PMID:10385121) MGI PMID:10385121 MGI:1339521 NCBI chr15:13,369,292...13,431,677
Ensembl chr15:13,371,925...13,430,951
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604917|PMID:16155214) Ensembl
Ensembl
MGI
PMID:16155214 GO_REF:0000107 MGI:3604917 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389
JBrowse link
G TBXT T-box transcription factor T acts_upstream_of_or_within ISO (MGI:3701028|PMID:16835439) MGI PMID:16835439 MGI:3701028 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352
JBrowse link
G TEAD2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3763398|PMID:17868131) Ensembl
Ensembl
MGI
PMID:17868131 GO_REF:0000107 MGI:3763398 NCBI chr 1:107,115,014...107,130,563
Ensembl chr 1:107,115,094...107,131,038
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1313057|PMID:9811866), (MGI:80519|PMID:8622766) MGI PMID:8622766 PMID:9811866 MGI:1313057 MGI:80519 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:3697552|PMID:17082251) MGI PMID:17082251 MGI:3697552 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (MGI:4453264|PMID:20178780) MGI PMID:20178780 MGI:4453264 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459
JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:31,674,242...31,689,160
Ensembl chr18:31,675,391...31,688,641
JBrowse link
G TRIM71 tripartite motif containing 71 acts_upstream_of_or_within ISO (MGI:4356244|PMID:19098426) MGI PMID:19098426 MGI:4356244 NCBI chr23:3,888,287...3,959,910
Ensembl chr23:3,893,647...3,960,411
JBrowse link
G TSC1 TSC complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2137425|PMID:11438694) MGI
Ensembl
PMID:11438694 GO_REF:0000107 MGI:2137425 NCBI chr 9:51,409,307...51,459,546
Ensembl chr 9:51,425,937...51,454,677
JBrowse link
G TSC2 TSC complex subunit 2 acts_upstream_of_or_within ISO (MGI:1333508|PMID:10096549) MGI PMID:10096549 MGI:1333508 NCBI chr 6:38,865,509...38,898,977
Ensembl chr 6:38,865,507...38,898,960
JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3841513|PMID:19223390) Ensembl
MGI
PMID:19223390 GO_REF:0000107 MGI:3841513 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:72096|PMID:7729687) MGI PMID:7729687 MGI:72096
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4438817|PMID:19966784)
(MGI:3703464|PMID:17229766)
(MGI:2153976|PMID:11709546), (MGI:2449213|PMID:12499390)
(MGI:4880797|PMID:21246654)
(MGI:2676511|PMID:14512015)
(MGI:5498591|PMID:23760952)
(MGI:3046397|PMID:15229603)
(MGI:3714704|PMID:17433286)
MGI PMID:11709546 PMID:12499390 PMID:14512015 PMID:15229603 PMID:17229766 More... MGI:2153976 MGI:2449213 MGI:2676511 MGI:3046397 MGI:3703464 MGI:3714704 MGI:4438817 MGI:4880797 MGI:5498591 NCBI chr38:21,822,873...21,824,537 JBrowse link
G VASP vasodilator stimulated phosphoprotein involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3054149|PMID:15371503)
GO_Central
GO_Central
MGI
PMID:15371503 PMID:21873635 MGI:3054149 NCBI chr 1:110,050,154...110,063,125
Ensembl chr 1:110,050,154...110,062,827
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413372|PMID:19795512)
(MGI:3714704|PMID:17433286)
MGI
Ensembl
PMID:17433286 PMID:19795512 GO_REF:0000107 MGI:3714704 MGI:4413372 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (MGI:3624924|PMID:16598713) MGI PMID:16598713 MGI:3624924 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122
JBrowse link
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055
JBrowse link
G ZIC5 Zic family member 5 acts_upstream_of_or_within ISO (MGI:3051968|PMID:15136147) MGI PMID:15136147 MGI:3051968 NCBI chr22:49,929,198...49,938,002
Ensembl chr22:49,931,460...49,937,853
JBrowse link
neural tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRPF1 bromodomain and PHD finger containing 1 acts_upstream_of_or_within ISO (MGI:5806011|PMID:27528195) MGI PMID:27528195 MGI:5806011 NCBI chr20:8,493,183...8,508,785
Ensembl chr20:8,493,167...8,506,449
JBrowse link
G CASP8 caspase 8 acts_upstream_of_or_within ISO (MGI:3609631|PMID:12404118) MGI PMID:12404118 MGI:3609631 NCBI chr37:10,362,071...10,402,108
Ensembl chr37:10,391,048...10,401,822
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (MGI:2179743|PMID:11694877) MGI PMID:11694877 MGI:2179743 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:2154585|PMID:11716496) MGI PMID:11716496 MGI:2154585 NCBI chr 6:25,912,936...25,922,123
Ensembl chr 6:25,912,954...25,929,655
JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679893|PMID:14603322) MGI
Ensembl
PMID:14603322 GO_REF:0000107 MGI:2679893 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796
JBrowse link
G IFT52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) MGI PMID:15930098 MGI:3579954 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808
JBrowse link
G IPMK inositol polyphosphate multikinase acts_upstream_of_or_within ISO (MGI:3583505|PMID:15939867) MGI PMID:15939867 MGI:3583505
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (MGI:3607973|PMID:16260493) MGI PMID:16260493 MGI:3607973 NCBI chr12:49,669,849...49,740,039
Ensembl chr12:49,672,389...49,739,850
JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (MGI:3603078|PMID:16000382) MGI PMID:16000382 MGI:3603078 NCBI chr 7:66,173,414...66,289,477
Ensembl chr 7:66,178,594...66,289,491
JBrowse link
G NUP50 nucleoporin 50 acts_upstream_of_or_within ISO (MGI:1860670|PMID:10891500) MGI PMID:10891500 MGI:1860670 NCBI chr10:20,828,879...20,846,539
Ensembl chr10:20,825,574...20,844,617
JBrowse link
G PTCH1 patched 1 involved_in ISO (MGI:3687672|PMID:10500113) Roslin_Institute PMID:10500113 MGI:3687672 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662
JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:8124714 RGD:69996 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISO (MGI:5285157|PMID:20596238) UniProt PMID:20596238 MGI:5285157
G SOX4 SRY-box transcription factor 4 involved_in ISO (MGI:5285157|PMID:20596238) UniProt PMID:20596238 MGI:5285157 NCBI chr35:20,098,783...20,101,357
Ensembl chr35:20,099,773...20,101,154
JBrowse link
G STK3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412133|PMID:19786569) Ensembl
Ensembl
MGI
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr13:647,363...920,887
Ensembl chr13:648,216...920,847
JBrowse link
G STK4 serine/threonine kinase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412133|PMID:19786569) MGI
Ensembl
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr24:32,375,630...32,463,848
Ensembl chr24:32,375,189...32,521,042
JBrowse link
G TCTN1 tectonic family member 1 acts_upstream_of_or_within ISO (MGI:3610767|PMID:16357211) MGI PMID:16357211 MGI:3610767 NCBI chr26:8,411,429...8,444,640
Ensembl chr26:8,407,105...8,437,027
JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (MGI:2136130|PMID:11406614) MGI PMID:11406614 MGI:2136130 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097
JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr38:21,822,873...21,824,537 JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683889|PMID:14623822) Ensembl
Ensembl
MGI
PMID:14623822 GO_REF:0000107 MGI:2683889 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGF3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (MGI:3720541|PMID:17601531) MGI PMID:17601531 MGI:3720541 NCBI chr18:48,382,819...48,388,453
Ensembl chr18:48,383,222...48,389,009
JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:3720541|PMID:17601531) MGI PMID:17601531 MGI:3720541 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:1197797|PMID:9435295) MGI
UniProt
PMID:9435295 GO_REF:0000024 MGI:1197797 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
G HESX1 HESX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1206234|PMID:9620767) MGI
Ensembl
PMID:9620767 GO_REF:0000107 MGI:1206234 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3795349|PMID:18377888) UniProt
MGI
UniProt
PMID:18377888 GO_REF:0000024 MGI:3795349 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G TCAP titin-cap involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9817758) Ensembl
Ensembl
BHF-UCL
PMID:9817758 GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3702803|PMID:16916509) Ensembl
MGI
PMID:16916509 GO_REF:0000107 MGI:3702803 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653
JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:3703494|PMID:17074316) MGI PMID:17074316 MGI:3703494 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:4830023|PMID:20704721) MGI PMID:20704721 MGI:4830023 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3624185|PMID:16571627)
GO_Central
MGI
PMID:16571627 PMID:21873635 MGI:3624185 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491
JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:3624185|PMID:16571627)
GO_Central
MGI
Ensembl
PMID:16571627 PMID:21873635 GO_REF:0000107 MGI:3624185 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857
JBrowse link
G DVL3 dishevelled segment polarity protein 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3821448|PMID:19008950)
(PMID:21873635)
MGI
GO_Central
PMID:19008950 PMID:21873635 MGI:3821448 NCBI chr34:17,053,534...17,069,965
Ensembl chr34:17,053,343...17,068,389
JBrowse link
G FZD1 frizzled class receptor 1 acts_upstream_of_or_within ISO (MGI:4837757|PMID:20940229) MGI PMID:20940229 MGI:4837757 NCBI chr14:17,046,911...17,050,515
Ensembl chr14:17,047,382...17,049,337
JBrowse link
G FZD2 frizzled class receptor 2 acts_upstream_of_or_within ISO (MGI:4837757|PMID:20940229) MGI PMID:20940229 MGI:4837757 NCBI chr 9:18,888,711...18,890,549
Ensembl chr 9:18,888,696...18,890,525
JBrowse link
G GRHL3 grainyhead like transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4819429|PMID:20643356) MGI
Ensembl
Ensembl
PMID:20643356 GO_REF:0000107 MGI:4819429 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4830023|PMID:20704721) Ensembl
Ensembl
MGI
PMID:20704721 GO_REF:0000107 MGI:4830023 NCBI chr12:11,593,017...11,657,149
Ensembl chr12:11,593,043...11,656,320
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3793375|PMID:18257070) Ensembl
MGI
Ensembl
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chr28:10,994,180...10,999,552
Ensembl chr28:10,993,930...10,999,564
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4819429|PMID:20643356)
(MGI:4830023|PMID:20704721)
(MGI:3624185|PMID:16571627)
(MGI:4837757|PMID:20940229)
(MGI:3821448|PMID:19008950)
(MGI:3793375|PMID:18257070)
MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... MGI:3624185 MGI:3793375 MGI:3821448 MGI:4819429 MGI:4830023 MGI:4837757 NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4830282|PMID:19056682) MGI
Ensembl
Ensembl
PMID:19056682 GO_REF:0000107 MGI:4830282 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:4452277 NCBI chr38:21,822,873...21,824,537 JBrowse link
positive regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (MGI:5588737|PMID:24863063) BHF-UCL PMID:24863063 MGI:5588737 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G MDK midkine involved_in ISO (PMID:19060126) UniProt PMID:19060126
G SIRT6 sirtuin 6 involved_in ISO (PMID:23201774) BHF-UCL PMID:23201774 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3801531|PMID:18533146) MGI PMID:18533146 MGI:3801531 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha ISO RGD PMID:8879189 RGD:11087558 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in ISO (PMID:18607644) UniProt PMID:18607644 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr23:43,569,658...43,617,113
Ensembl chr23:43,614,035...43,616,238
JBrowse link
G AGTR2 angiotensin II receptor type 2 involved_in ISO PMID:17537984
(MGI:3808848|PMID:18607644)
UniProt PMID:17537984 PMID:18607644 MGI:3808848 RGD:1643596 NCBI chr  X:88,703,551...88,708,451
Ensembl chr  X:88,705,765...88,706,853
JBrowse link
G B9D2 B9 domain containing 2 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714585|PMID:17522159)
(MGI:4949995|PMID:21281623)
Ensembl
MGI
PMID:17522159 PMID:21281623 GO_REF:0000107 MGI:3714585 MGI:4949995 NCBI chr30:2,219,535...2,231,868
Ensembl chr30:2,222,898...2,225,418
JBrowse link
G HOXB7 homeobox B7 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:24,870,037...24,874,517
Ensembl chr 9:24,870,612...24,873,453
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr21:47,952,019...47,995,530
Ensembl chr21:47,952,890...47,996,288
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (MGI:3848096|PMID:19268530) UniProt PMID:19268530 MGI:3848096 NCBI chr  X:44,395,091...44,458,705
Ensembl chr  X:44,395,015...44,458,705
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:31,455,389...31,456,057 JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325), (MGI:3833510|PMID:17881463), (MGI:5009394|PMID:17538188) UniProt PMID:17314325 PMID:17538188 PMID:17881463 MGI:3704067 MGI:3833510 MGI:5009394 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr 2:64,242,742.