ONTOLOGY REPORT - ANNOTATIONS |
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Term: | developmental growth involved in morphogenesis |
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Accession: | GO:0060560
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browse the term
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Definition: | The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape. |
Synonyms: | exact_synonym: | differential growth |
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Ext1 |
exostosin glycosyltransferase 1 |
acts_upstream_of_or_within |
ISO |
(PMID:23192691), (PMID:23958822) |
RGD |
PMID:23192691 PMID:23958822 |
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NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
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Tbx2 |
T-box transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:4415614 (PMID:19769959) |
RGD |
PMID:19769959 |
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NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
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Wnt7b |
Wnt family member 7B |
acts_upstream_of_or_within |
ISO |
MGI:3793280 (PMID:19060336) |
RGD |
PMID:19060336 |
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NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
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Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:2156191 (PMID:19795512) |
RGD |
PMID:19795512 |
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NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
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Nkd1 |
NKD inhibitor of WNT signaling pathway 1 |
involved_in |
ISO |
(PMID:11274398) |
RGD |
PMID:11274398 |
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NCBI chr19:18,476,344...18,549,380
Ensembl chr19:18,476,344...18,549,380
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Ptk7 |
protein tyrosine kinase 7 |
acts_upstream_of_or_within |
ISO |
MGI:3640803 (PMID:20704721) |
RGD |
PMID:20704721 |
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NCBI chr 9:14,352,155...14,418,473
Ensembl chr 9:14,351,202...14,418,494
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Wnt5a |
Wnt family member 5A |
acts_upstream_of_or_within |
ISO |
MGI:1857617 (PMID:19100728), (PMID:19795512) |
RGD |
PMID:19100728 PMID:19795512 |
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NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:98956 (PMID:11029008) |
RGD |
PMID:11029008 |
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NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
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Med12 |
mediator complex subunit 12 |
acts_upstream_of_or_within |
ISO |
MGI:4839484 (PMID:20630950) |
RGD |
PMID:20630950 |
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NCBI chr X:66,404,807...66,427,775
Ensembl chr X:66,404,760...66,428,387
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Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
MGI:1298218 (PMID:11029008) |
RGD |
PMID:11029008 |
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NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
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Auts2 |
activator of transcription and developmental regulator AUTS2 |
involved_in |
ISO |
(PMID:25533347) |
RGD |
PMID:25533347 |
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NCBI chr12:24,104,187...25,194,123
Ensembl chr12:24,104,192...25,194,416
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Bdnf |
brain-derived neurotrophic factor |
acts_upstream_of_or_within |
ISO |
(PMID:24035762) |
RGD |
PMID:24035762 |
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NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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Cdh4 |
cadherin 4 |
involved_in acts_upstream_of |
IEA ISO |
GO_REF:0000107 (PMID:14586016) |
Ensembl RGD |
PMID:14586016 |
GO_REF:0000107 |
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
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Cdk5 |
cyclin-dependent kinase 5 |
involved_in |
TAS |
PMID:11276227 |
UniProt |
PMID:11276227 |
RGD:8554712 |
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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Cdk5r1 |
cyclin-dependent kinase 5 regulatory subunit 1 |
involved_in |
TAS |
PMID:11276227 |
UniProt |
PMID:11276227 |
RGD:8554712 |
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
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Cyfip1 |
cytoplasmic FMR1 interacting protein 1 |
involved_in |
ISO |
(PMID:16260607) |
RGD |
PMID:16260607 |
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NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
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Dclk1 |
doublecortin-like kinase 1 |
involved_in acts_upstream_of_or_within |
IEA IBA ISO |
GO_REF:0000107 GO_REF:0000033 MGI:1277171 (PMID:16387638) |
Ensembl GO_Central RGD |
PMID:16387638 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
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Dcx |
doublecortin |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1330861 (PMID:16387638) |
Ensembl RGD |
PMID:16387638 |
GO_REF:0000107 |
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
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Dvl1 |
dishevelled segment polarity protein 1 |
acts_upstream_of_or_within |
ISO |
(PMID:18716223) |
RGD |
PMID:18716223 |
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NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
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Edn1 |
endothelin 1 |
involved_in |
ISO |
(PMID:18401410) |
RGD |
PMID:18401410 |
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NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
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Edn2 |
endothelin 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:18401410) |
Ensembl RGD |
PMID:18401410 |
GO_REF:0000107 |
NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
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Edn3 |
endothelin 3 |
involved_in |
ISO |
(PMID:18401410) |
RGD |
PMID:18401410 |
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NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
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Ednra |
endothelin receptor type A |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:18401410) |
Ensembl RGD |
PMID:18401410 |
GO_REF:0000107 |
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
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Gsk3b |
glycogen synthase kinase 3 beta |
acts_upstream_of |
ISO |
MGI:106658|MGI:98927 (PMID:24623780) |
RGD |
PMID:24623780 |
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NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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Itgb1 |
integrin subunit beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1306826 (PMID:12879062) |
Ensembl RGD |
PMID:12879062 |
GO_REF:0000107 |
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
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Lhx2 |
LIM homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:21857657) |
Ensembl RGD |
PMID:21857657 |
GO_REF:0000107 |
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
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Limk1 |
LIM domain kinase 1 |
involved_in acts_upstream_of |
IEA ISO |
GO_REF:0000107 MGI:1921382 (PMID:16204183) |
Ensembl RGD |
PMID:16204183 |
GO_REF:0000107 |
NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
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Map1b |
microtubule-associated protein 1B |
acts_upstream_of_or_within |
ISO |
MGI:2148182 (PMID:16536727) |
RGD |
PMID:16536727 |
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NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
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Mapt |
microtubule-associated protein tau |
acts_upstream_of_or_within |
ISO |
MGI:2385630 (PMID:11891784), (PMID:16536727), (PMID:20338169) |
RGD |
PMID:11891784 PMID:16536727 PMID:20338169 |
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NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
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Mir124-1 |
microRNA 124-1 |
acts_upstream_of_or_within |
ISO |
MGI:3618700 (PMID:21857657) |
RGD |
PMID:21857657 |
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NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
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Mir124-2 |
microRNA 124-2 |
acts_upstream_of_or_within |
ISO |
MGI:2676807 (PMID:21857657) |
RGD |
PMID:21857657 |
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NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974
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Ndn |
necdin, MAGE family member |
acts_upstream_of_or_within |
ISO |
MGI:2653048 (PMID:15972963) |
RGD |
PMID:15972963 |
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NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
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Ngf |
nerve growth factor |
acts_upstream_of |
ISO |
(PMID:8861722) |
RGD |
PMID:8861722 |
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NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
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Nlgn3 |
neuroligin 3 |
involved_in |
IMP |
PMID:19406211 |
BHF-UCL |
PMID:19406211 |
RGD:8554851 |
NCBI chr X:66,427,926...66,457,378
Ensembl chr X:66,429,458...66,451,876
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Nrp1 |
neuropilin 1 |
acts_upstream_of |
ISO |
MGI:107558 (PMID:12852851) |
RGD |
PMID:12852851 |
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NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Pou4f2 |
POU class 4 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:102523 (PMID:11807038) |
RGD |
PMID:11807038 |
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NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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Pou4f3 |
POU class 4 homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:102524 (PMID:11807038) |
RGD |
PMID:11807038 |
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NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
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Raph1 |
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 |
acts_upstream_of_or_within |
ISO |
(PMID:20417104) |
RGD |
PMID:20417104 |
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NCBI chr 9:61,907,476...61,990,170
Ensembl chr 9:61,907,758...61,961,209
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RGD1359108 |
similar to RIKEN cDNA 3110043O21 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:27723745) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:27723745 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
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Rnf6 |
ring finger protein 6 |
acts_upstream_of |
ISO |
MGI:104572 (PMID:16204183) |
RGD |
PMID:16204183 |
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NCBI chr12:8,816,797...8,826,870
Ensembl chr12:8,816,833...8,826,847
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Sema3a |
semaphorin 3A |
acts_upstream_of |
ISO |
MGI:106206 (PMID:12852851) |
RGD |
PMID:12852851 |
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NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema5a |
semaphorin 5A |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:107555 (PMID:21835343) |
GO_Central RGD |
PMID:21835343 |
GO_REF:0000033 |
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
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Sema5b |
semaphorin 5B |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:107556 (PMID:21835343) |
GO_Central RGD |
PMID:21835343 |
GO_REF:0000033 |
NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311
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Sema7a |
semaphorin 7A (John Milton Hagen blood group) |
acts_upstream_of_or_within |
ISO |
MGI:2683867|MGI:96610 (PMID:12879062) |
RGD |
PMID:12879062 |
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NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
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Slc9a6 |
solute carrier family 9 member A6 |
acts_upstream_of_or_within |
ISO |
(PMID:24035762) |
RGD |
PMID:24035762 |
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NCBI chr X:134,430,677...134,486,747
Ensembl chr X:134,420,756...134,485,375
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Spg11 |
SPG11 vesicle trafficking associated, spatacsin |
acts_upstream_of_or_within |
ISO |
(PMID:24794856) |
RGD |
PMID:24794856 |
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NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
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Srf |
serum response factor |
acts_upstream_of |
ISO |
MGI:3522206 (PMID:24623780) |
RGD |
PMID:24623780 |
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NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
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Ssna1 |
SS nuclear autoantigen 1 |
involved_in |
ISO IBA |
(PMID:25390646) GO_REF:0000033 (PMID:30250060) |
RGD GO_Central |
PMID:25390646 PMID:30250060 |
GO_REF:0000033 |
NCBI chr 3:8,084,949...8,086,417
Ensembl chr 3:8,084,974...8,086,356
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Tnr |
tenascin R |
acts_upstream_of |
ISO |
(PMID:16831557) |
RGD |
PMID:16831557 |
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NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
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Ulk1 |
unc-51 like autophagy activating kinase 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:17389358) |
GO_Central RGD |
PMID:17389358 |
GO_REF:0000033 |
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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Ulk2 |
unc-51 like autophagy activating kinase 2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:17389358) |
GO_Central RGD |
PMID:17389358 |
GO_REF:0000033 |
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
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Usp9x |
ubiquitin specific peptidase 9, X-linked |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:24607389) MGI:5438072 (PMID:23861879) |
RGD |
PMID:23861879 PMID:24607389 |
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NCBI chr X:9,588,825...9,726,993
Ensembl chr X:9,588,825...9,696,711
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Vcl |
vinculin |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:106658|MGI:1861437 (PMID:24623780) |
Ensembl RGD |
PMID:24623780 |
GO_REF:0000107 |
NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
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Alcam |
activated leukocyte cell adhesion molecule |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
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Nrp1 |
neuropilin 1 |
acts_upstream_of involved_in |
ISO |
(PMID:9753685) (PMID:22790009) |
RGD |
PMID:9753685 PMID:22790009 |
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NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Nrp2 |
neuropilin 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:22790009) |
Ensembl RGD |
PMID:22790009 |
GO_REF:0000107 |
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
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Plxna3 |
plexin A3 |
acts_upstream_of |
ISO |
MGI:107558|MGI:1096347 (PMID:11683995) |
RGD |
PMID:11683995 |
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NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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Ryk |
receptor-like tyrosine kinase |
acts_upstream_of |
ISO |
MGI:98958 (PMID:16723543) |
RGD |
PMID:16723543 |
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NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
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Sema3a |
semaphorin 3A |
acts_upstream_of involved_in |
ISO |
MGI:104518|MGI:107683|MGI:96721 (PMID:11683995), (PMID:18550718), (PMID:7748561), (PMID:9753685) (PMID:22790009) |
RGD |
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 PMID:22790009 |
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NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema3f |
semaphorin 3F |
acts_upstream_of involved_in |
ISO |
MGI:107683 (PMID:11683995), (PMID:9753685) (PMID:22790009) |
RGD |
PMID:9753685 PMID:11683995 PMID:22790009 |
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NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
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Slit1 |
slit guidance ligand 1 |
involved_in |
ISO IEA |
(PMID:16840550) GO_REF:0000107 |
RGD Ensembl |
PMID:16840550 |
GO_REF:0000107 |
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
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Slit2 |
slit guidance ligand 2 |
involved_in |
ISO IEA |
(PMID:16840550) GO_REF:0000107 |
RGD Ensembl |
PMID:16840550 |
GO_REF:0000107 |
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Slit3 |
slit guidance ligand 3 |
involved_in |
ISO IEA |
(PMID:16840550) GO_REF:0000107 |
RGD Ensembl |
PMID:16840550 |
GO_REF:0000107 |
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
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Smo |
smoothened, frizzled class receptor |
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IMP |
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RGD |
PMID:19447091 |
RGD:2324988 |
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
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Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of |
IEA ISO |
GO_REF:0000107 MGI:101766 (PMID:16723543) |
Ensembl RGD |
PMID:16723543 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Lamb2 |
laminin subunit beta 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856026 (PMID:9396756) |
Ensembl RGD |
PMID:9396756 |
GO_REF:0000107 |
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
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Ntrk3 |
neurotrophic receptor tyrosine kinase 3 |
acts_upstream_of |
ISO |
MGI:97380 (PMID:16142215) |
RGD |
PMID:16142215 |
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NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
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Tnr |
tenascin R |
involved_in acts_upstream_of |
IEA ISO |
GO_REF:0000107 MGI:2154583 (PMID:16870730) |
Ensembl RGD |
PMID:16870730 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
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G |
Tgfb1 |
transforming growth factor, beta 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857258 (PMID:18614704) |
RGD |
PMID:18614704 |
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NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
MGI:1859647 (PMID:15972105) |
RGD |
PMID:15972105 |
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NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
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G |
Fgfr2 |
fibroblast growth factor receptor 2 |
acts_upstream_of_or_within |
ISO |
MGI:1099809|MGI:2153811 (PMID:15972105) |
RGD |
PMID:15972105 |
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NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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G |
Fgf1 |
fibroblast growth factor 1 |
involved_in |
ISO ISS |
(PMID:11731227) GO_REF:0000024 |
RGD UniProt |
PMID:11731227 |
GO_REF:0000024 |
NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357
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G |
Hoxd13 |
homeo box D13 |
acts_upstream_of_or_within |
ISO |
MGI:1857871 (PMID:9097018) |
RGD |
PMID:9097018 |
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NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963
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G |
Bmp4 |
bone morphogenetic protein 4 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:8674409) GO_REF:0000107 |
RGD Ensembl |
PMID:8674409 |
GO_REF:0000107 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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G |
Bmp4 |
bone morphogenetic protein 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:18367557) |
Ensembl RGD |
PMID:18367557 |
GO_REF:0000107 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
MGI:1345138|MGI:1345139 (PMID:21764747) |
RGD |
PMID:21764747 |
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NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
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G |
Fgfr2 |
fibroblast growth factor receptor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3629660 (PMID:16989802) |
RGD |
PMID:16989802 |
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NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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G |
Rdh10 |
retinol dehydrogenase 10 |
acts_upstream_of_or_within |
ISO |
(PMID:17473173) |
RGD |
PMID:17473173 |
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NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
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G |
Spry1 |
sprouty RTK signaling antagonist 1 |
acts_upstream_of_or_within |
ISO |
MGI:1099809|MGI:1345138 (PMID:21764747) |
RGD |
PMID:21764747 |
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NCBI chr 2:120,557,256...120,561,917
Ensembl chr 2:120,556,706...120,566,189
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G |
Spry2 |
sprouty RTK signaling antagonist 2 |
acts_upstream_of_or_within |
ISO |
MGI:1099809|MGI:1345139 (PMID:21764747) |
RGD |
PMID:21764747 |
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NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
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G |
Yap1 |
Yes1 associated transcriptional regulator |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3053959|MGI:5316446 (PMID:25043473) |
Ensembl RGD |
PMID:25043473 |
GO_REF:0000107 |
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
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G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
(PMID:9740653) |
RGD |
PMID:9740653 |
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NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
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G |
Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857796 (PMID:9731532) |
Ensembl RGD |
PMID:9731532 |
GO_REF:0000107 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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G |
Tmtc3 |
transmembrane O-mannosyltransferase targeting cadherins 3 |
acts_upstream_of_or_within |
ISO |
MGI:4124060 (PMID:21956870) |
RGD |
PMID:21956870 |
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NCBI chr 7:35,264,886...35,310,010
Ensembl chr 7:35,264,892...35,310,385
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G |
Tnc |
tenascin C |
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IMP |
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RGD |
PMID:16928692 |
RGD:4889612 |
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
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G |
Adprhl1 |
ADP-ribosylhydrolase like 1 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr16:76,283,186...76,315,075
Ensembl chr16:76,283,103...76,354,440
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G |
S1pr1 |
sphingosine-1-phosphate receptor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21668976) |
UniProt RGD |
PMID:21668976 |
GO_REF:0000024 |
NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681
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G |
Edn2 |
endothelin 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:24043815) |
Ensembl RGD |
PMID:24043815 |
GO_REF:0000107 |
NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
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G |
Ahr |
aryl hydrocarbon receptor |
involved_in |
ISO |
(PMID:14644620) |
RGD |
PMID:14644620 |
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NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
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G |
Bdnf |
brain-derived neurotrophic factor |
involved_in |
ISO IEA |
(PMID:19036963) GO_REF:0000107 |
RGD Ensembl |
PMID:19036963 |
GO_REF:0000107 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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G |
Cd2ap |
CD2-associated protein |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:27076424) |
Ensembl RGD |
PMID:27076424 |
GO_REF:0000107 |
NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199
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G |
Dvl1 |
dishevelled segment polarity protein 1 |
acts_upstream_of_or_within |
ISO |
(PMID:18716223) |
RGD |
PMID:18716223 |
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NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
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G |
Efna5 |
ephrin A5 |
involved_in |
ISO |
(PMID:19036963) |
RGD |
PMID:19036963 |
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NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
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G |
Hdac6 |
histone deacetylase 6 |
acts_upstream_of_or_within |
ISO |
(PMID:24113571) |
RGD |
PMID:24113571 |
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NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
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G |
Ist1 |
IST1 factor associated with ESCRT-III |
involved_in acts_upstream_of |
IEA ISO |
GO_REF:0000107 MGI:2139806 (PMID:22619377) |
Ensembl RGD |
PMID:22619377 |
GO_REF:0000107 |
NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956
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G |
Lpar3 |
lysophosphatidic acid receptor 3 |
involved_in acts_upstream_of |
IEA ISO |
GO_REF:0000107 (PMID:22465231) |
Ensembl RGD |
PMID:22465231 |
GO_REF:0000107 |
NCBI chr 2:235,125,234...235,193,916
Ensembl chr 2:235,149,065...235,193,357
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G |
Nfix |
nuclear factor I X |
acts_upstream_of_or_within |
ISO |
MGI:3802570 (PMID:30272140) |
RGD |
PMID:30272140 |
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NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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G |
Nin |
ninein |
acts_upstream_of_or_within |
ISO |
MGI:1344407 (PMID:25741725) |
RGD |
PMID:25741725 |
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NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
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G |
Npr2 |
natriuretic peptide receptor 2 |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:1856702|MGI:5567995 (PMID:17954614), (PMID:24431432), (PMID:25473838) |
Ensembl RGD |
PMID:17954614 PMID:24431432 PMID:25473838 |
GO_REF:0000107 |
NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
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G |
Prkg1 |
protein kinase cGMP-dependent 1 |
involved_in |
ISO |
MGI:2668650 (PMID:17954614) |
RGD |
PMID:17954614 |
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NCBI chr 1:228,409,605...229,638,794
Ensembl chr 1:228,408,947...229,639,080
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G |
Rnd2 |
Rho family GTPase 2 |
acts_upstream_of |
ISO |
(PMID:22465231) |
RGD |
PMID:22465231 |
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NCBI chr10:86,399,151...86,402,750
Ensembl chr10:86,399,148...86,402,742
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G |
Septin7 |
septin 7 |
acts_upstream_of_or_within |
ISO |
(PMID:24113571) |
RGD |
PMID:24113571 |
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NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
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G |
Spg21 |
SPG21 abhydrolase domain containing, maspardin |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:20661613), (PMID:26978163) GO_REF:0000107 |
RGD Ensembl |
PMID:20661613 PMID:26978163 |
GO_REF:0000107 |
NCBI chr 8:65,980,992...66,008,537
Ensembl chr 8:65,980,962...66,008,536
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G |
Ulk1 |
unc-51 like autophagy activating kinase 1 |
acts_upstream_of |
ISO |
(PMID:17389358) |
RGD |
PMID:17389358 |
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NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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G |
Ulk2 |
unc-51 like autophagy activating kinase 2 |
acts_upstream_of |
ISO |
(PMID:17389358) |
RGD |
PMID:17389358 |
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NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
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G |
Zeb2 |
zinc finger E-box binding homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2387499|MGI:2668659 (PMID:25741725) |
RGD |
PMID:25741725 |
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NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
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G |
App |
amyloid beta precursor protein |
involved_in acts_upstream_of_or_within |
ISS ISO IEA |
GO_REF:0000024 MGI:88047 (PMID:15689559) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:15689559 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
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G |
Cobl |
cordon-bleu WH2 repeat protein |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:17956734) |
Ensembl RGD |
PMID:17956734 |
GO_REF:0000107 |
NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800
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G |
Spart |
spartin |
acts_upstream_of |
ISO |
MGI:1919205|MGI:5430946 (PMID:22619377) |
RGD |
PMID:22619377 |
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NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248
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G |
Sfrp2 |
secreted frizzled-related protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:108078|MGI:1860298 (PMID:18257070) |
RGD |
PMID:18257070 |
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NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
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G |
Sfrp5 |
secreted frizzled-related protein 5 |
acts_upstream_of_or_within |
ISO |
MGI:108078|MGI:892014 (PMID:18257070) |
RGD |
PMID:18257070 |
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NCBI chr 1:241,006,762...241,011,224
Ensembl chr 1:241,006,762...241,011,224
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G |
Trim28 |
tripartite motif-containing 28 |
acts_upstream_of_or_within |
ISO |
MGI:1928907 (PMID:22110054) |
RGD |
PMID:22110054 |
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NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
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G |
Vangl2 |
VANGL planar cell polarity protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857642 (PMID:17229766) |
RGD |
PMID:17229766 |
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NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
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G |
Wnt11 |
Wnt family member 11 |
acts_upstream_of_or_within |
ISO |
MGI:98958 (PMID:25813538) |
RGD |
PMID:25813538 |
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NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
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G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:101948|MGI:1857617 (PMID:25813538) |
Ensembl RGD |
PMID:25813538 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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G |
Zfp568 |
zinc finger protein 568 |
acts_upstream_of_or_within |
ISO |
MGI:3578538 (PMID:18701545) |
RGD |
PMID:18701545 |
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NCBI chr 1:85,206,643...85,257,759
Ensembl chr 1:85,207,579...85,257,505
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G |
Sfrp1 |
secreted frizzled-related protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:108078|MGI:1860298 (PMID:18257070) |
Ensembl RGD |
PMID:18257070 |
GO_REF:0000107 |
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
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G |
Auts2 |
activator of transcription and developmental regulator AUTS2 |
involved_in |
ISO |
(PMID:25533347) |
RGD |
PMID:25533347 |
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NCBI chr12:24,104,187...25,194,123
Ensembl chr12:24,104,192...25,194,416
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G |
Bdnf |
brain-derived neurotrophic factor |
acts_upstream_of_or_within |
ISO |
(PMID:24035762) |
RGD |
PMID:24035762 |
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NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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G |
Cdkl3 |
cyclin-dependent kinase-like 3 |
acts_upstream_of_or_within involved_in |
IMP ISO IBA |
PMID:20347982 (PMID:20347982) GO_REF:0000033 |
RGD GO_Central |
PMID:20347982 PMID:20347982 |
GO_REF:0000033, RGD:8693354 |
NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
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G |
Cyfip1 |
cytoplasmic FMR1 interacting protein 1 |
involved_in |
ISO |
(PMID:27605705) |
RGD |
PMID:27605705 |
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NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
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G |
Cyfip2 |
cytoplasmic FMR1 interacting protein 2 |
involved_in |
ISO |
(PMID:27605705) |
RGD |
PMID:27605705 |
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NCBI chr10:30,621,318...30,741,113
Ensembl chr10:30,621,318...30,741,113
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G |
Llph |
LLP homolog, long-term synaptic facilitation factor |
involved_in |
IBA ISO |
GO_REF:0000033 (PMID:26961175) |
GO_Central RGD |
PMID:26961175 |
GO_REF:0000033 |
NCBI chr 7:55,735,317...55,740,341
Ensembl chr 7:55,735,400...55,740,339
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G |
Sh3gl2 |
SH3 domain containing GRB2 like 2, endophilin A1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21849472) |
UniProt RGD |
PMID:21849472 |
GO_REF:0000024 |
NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
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G |
Slc9a6 |
solute carrier family 9 member A6 |
acts_upstream_of_or_within |
ISO |
(PMID:24035762) |
RGD |
PMID:24035762 |
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NCBI chr X:134,430,677...134,486,747
Ensembl chr X:134,420,756...134,485,375
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G |
Stk11 |
serine/threonine kinase 11 |
acts_upstream_of_or_within |
ISO |
MGI:2387402 (PMID:24367100) |
RGD |
PMID:24367100 |
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NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
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G |
Tmem108 |
transmembrane protein 108 |
involved_in |
IBA ISO |
GO_REF:0000033 (PMID:21849472), (PMID:27605705) |
GO_Central RGD |
PMID:21849472 PMID:27605705 |
GO_REF:0000033 |
NCBI chr 8:104,066,081...104,360,172
Ensembl chr 8:104,066,078...104,360,094
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G |
Wasf1 |
WASP family member 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:27605705) |
Ensembl RGD |
PMID:27605705 |
GO_REF:0000107 |
NCBI chr20:44,325,815...44,372,999
Ensembl chr20:44,325,795...44,372,996
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G |
Areg |
amphiregulin |
acts_upstream_of_or_within |
ISO |
MGI:2176531 (PMID:17369357) |
RGD |
PMID:17369357 |
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NCBI chr14:16,972,185...16,981,443
Ensembl chr14:16,972,187...16,981,535
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G |
Tfap2c |
transcription factor AP-2 gamma |
acts_upstream_of_or_within |
ISO |
MGI:3040993 (PMID:20131354) |
RGD |
PMID:20131354 |
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NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
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G |
Areg |
amphiregulin |
acts_upstream_of_or_within |
ISO |
MGI:2176531 (PMID:17369357) |
RGD |
PMID:17369357 |
|
NCBI chr14:16,972,185...16,981,443
Ensembl chr14:16,972,187...16,981,535
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G |
Esr1 |
estrogen receptor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2150897 (PMID:12021201) |
Ensembl RGD |
PMID:12021201 |
GO_REF:0000107 |
NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
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G |
Med1 |
mediator complex subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:3511276 (PMID:15647257) |
RGD |
PMID:15647257 |
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NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
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G |
Tfap2c |
transcription factor AP-2 gamma |
acts_upstream_of_or_within |
ISO |
MGI:3040993 (PMID:20131354) |
RGD |
PMID:20131354 |
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NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
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G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:17898001) |
Ensembl RGD |
PMID:17898001 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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G |
Sox9 |
SRY-box transcription factor 9 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2429649|MGI:3689997 (PMID:18325490) |
UniProt RGD |
PMID:18325490 |
GO_REF:0000024 |
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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G |
Mesp1 |
mesoderm posterior bHLH transcription factor 1 |
involved_in |
ISO |
(PMID:10393122) |
RGD |
PMID:10393122 |
|
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
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G |
Notch1 |
notch receptor 1 |
involved_in |
ISO |
(PMID:20007915) |
RGD |
PMID:20007915 |
|
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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G |
Cst5 |
cystatin D |
involved_in |
ISO |
MGI:3629665 (PMID:16680148) |
RGD |
PMID:16680148 |
|
NCBI chr 3:137,573,194...137,577,754
Ensembl chr 3:137,573,194...137,577,754
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G |
Rarg |
retinoic acid receptor, gamma |
involved_in |
ISO |
(PMID:19389355) |
RGD |
PMID:19389355 |
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NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
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G |
Sox9 |
SRY-box transcription factor 9 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22421045) |
UniProt RGD |
PMID:22421045 |
GO_REF:0000024 |
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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G |
Tgfbr2 |
transforming growth factor, beta receptor 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2384513 (PMID:21420963) |
Ensembl RGD |
PMID:21420963 |
GO_REF:0000107 |
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
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G |
Ahr |
aryl hydrocarbon receptor |
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IDA |
|
RGD |
PMID:26372666 |
RGD:407419879 |
NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
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|
G |
Ccl11 |
C-C motif chemokine ligand 11 |
acts_upstream_of_or_within |
ISO |
MGI:2384435 (PMID:10804170) |
RGD |
PMID:10804170 |
|
NCBI chr10:67,028,328...67,032,929
Ensembl chr10:67,028,328...67,032,926
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G |
Csf1 |
colony stimulating factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856333 (PMID:10804170) |
RGD |
PMID:10804170 |
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NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
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G |
Kdm5b |
lysine demethylase 5B |
acts_upstream_of_or_within |
ISO |
MGI:4329395 (PMID:24802759) |
RGD |
PMID:24802759 |
|
NCBI chr13:46,001,589...46,073,868
Ensembl chr13:46,002,542...46,073,872
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G |
Mst1 |
macrophage stimulating 1 |
acts_upstream_of_or_within |
ISO |
MGI:2445230 (PMID:25049204) |
RGD |
PMID:25049204 |
|
NCBI chr 8:108,767,886...108,773,425
Ensembl chr 8:108,768,839...108,773,416
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G |
Robo1 |
roundabout guidance receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:3043142 (PMID:16439476) |
RGD |
PMID:16439476 |
|
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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G |
Slc12a2 |
solute carrier family 12 member 2 |
acts_upstream_of_or_within |
ISO |
MGI:1935144 (PMID:12040017) |
RGD |
PMID:12040017 |
|
NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
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G |
Slit2 |
slit guidance ligand 2 |
acts_upstream_of_or_within |
ISO |
MGI:2179460 (PMID:16439476) |
RGD |
PMID:16439476 |
|
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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|
G |
Pthlh |
parathyroid hormone-like hormone |
acts_upstream_of_or_within |
ISO |
MGI:2154515 (PMID:9477327) |
RGD |
PMID:9477327 |
|
NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
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G |
Actr3 |
actin related protein 3 |
|
IMP |
|
RGD |
PMID:19846719 |
RGD:11530054 |
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
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G |
Arhgap4 |
Rho GTPase activating protein 4 |
|
IMP |
|
RGD |
PMID:17804252 |
RGD:2313143 |
NCBI chr X:151,636,071...151,651,528
Ensembl chr X:151,632,454...151,651,128
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G |
Ccr5 |
C-C motif chemokine receptor 5 |
|
IMP |
|
RGD |
PMID:16537566 |
RGD:4890441 |
NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
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G |
Cdh1 |
cadherin 1 |
|
IMP |
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
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|
G |
Cdk5 |
cyclin-dependent kinase 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1197518 (PMID:22573681) |
Ensembl RGD |
PMID:22573681 |
GO_REF:0000107 |
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
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G |
Cdkl3 |
cyclin-dependent kinase-like 3 |
acts_upstream_of_or_within involved_in |
IMP ISO IBA |
PMID:20347982 (PMID:20347982) GO_REF:0000033 |
RGD GO_Central |
PMID:20347982 PMID:20347982 |
GO_REF:0000033, RGD:8693354 |
NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
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G |
Dip2b |
disco-interacting protein 2 homolog B |
involved_in |
ISO |
(PMID:32153366) |
RGD |
PMID:32153366 |
|
NCBI chr 7:131,174,575...131,350,417
Ensembl chr 7:131,174,567...131,349,092
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G |
Draxin |
dorsal inhibitory axon guidance protein |
acts_upstream_of_or_within |
ISO |
(PMID:20621059) |
RGD |
PMID:20621059 |
|
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
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|
G |
Fstl4 |
follistatin-like 4 |
NOT|acts_upstream_of_or_within |
ISO |
(PMID:24573299) |
RGD |
PMID:24573299 |
|
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
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|
G |
Ifrd1 |
interferon-related developmental regulator 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97321 (PMID:18052984) |
Ensembl RGD |
PMID:18052984 |
GO_REF:0000107 |
NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
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G |
Kiaa0319 |
KIAA0319 homolog |
acts_upstream_of_or_within |
ISO |
(PMID:28334068) |
RGD |
PMID:28334068 |
|
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
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|
G |
Mag |
myelin-associated glycoprotein |
involved_in |
IMP |
PMID:9298990 |
UniProt |
PMID:9298990 |
RGD:12050149 |
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
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|
G |
Map2 |
microtubule-associated protein 2 |
involved_in |
IMP ISO |
PMID:28426968 (PMID:28426968) |
RGD |
PMID:28426968 PMID:28426968 |
RGD:13514087 |
NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
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G |
Mt3 |
metallothionein 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:16601975), (PMID:17712581) |
UniProt RGD |
PMID:16601975 PMID:17712581 |
GO_REF:0000024 |
NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
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|
G |
Nrp1 |
neuropilin 1 |
acts_upstream_of_or_within |
ISO |
MGI:107558 (PMID:12852851) |
RGD |
PMID:12852851 |
|
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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|
G |
Ntn1 |
netrin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:10704383) |
Ensembl RGD |
PMID:10704383 |
GO_REF:0000107 |
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
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G |
Ptprs |
protein tyrosine phosphatase, receptor type, S |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:19780196) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:19780196 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
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G |
Rnf6 |
ring finger protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:104572 (PMID:16204183) |
RGD |
PMID:16204183 |
|
NCBI chr12:8,816,797...8,826,870
Ensembl chr12:8,816,833...8,826,847
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G |
Rtn4 |
reticulon 4 |
involved_in |
ISS ISO IEA IDA |
PMID:10667797 (PMID:20573699) GO_REF:0000107 (PMID:10667797) |
RGD Ensembl |
PMID:10667797 PMID:20573699 PMID:10667797 PMID:20573699 |
GO_REF:0000107, RGD:8553459, RGD:8554113 |
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
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G |
Rtn4r |
reticulon 4 receptor |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22923615) |
UniProt RGD |
PMID:22923615 |
GO_REF:0000024 |
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
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|
G |
Sema3a |
semaphorin 3A |
acts_upstream_of_or_within |
IDA ISO |
MGI:106206 (PMID:12852851) |
RGD |
PMID:12852851 PMID:12077190 |
RGD:628318 |
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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G |
Sema3g |
semaphorin 3G |
involved_in |
ISO |
(PMID:16098142) |
RGD |
PMID:16098142 |
|
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
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|
G |
Sema4f |
ssemaphorin 4F |
acts_upstream_of_or_within |
IDA |
PMID:10051670 |
MGI |
PMID:10051670 |
RGD:69991 |
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
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|
G |
Sema6c |
semaphorin 6C |
involved_in |
ISO |
(PMID:12110693) |
RGD |
PMID:12110693 |
|
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
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G |
Sema6d |
semaphorin 6D |
involved_in |
ISO |
(PMID:12110693) |
RGD |
PMID:12110693 |
|
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
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G |
Slit2 |
slit guidance ligand 2 |
acts_upstream_of_or_within |
ISO |
(PMID:12879062) |
RGD |
PMID:12879062 |
|
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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G |
Tnr |
tenascin R |
acts_upstream_of_or_within |
ISO |
(PMID:16831557) |
RGD |
PMID:16831557 |
|
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
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|
G |
Trim46 |
tripartite motif-containing 46 |
involved_in |
IMP |
PMID:28426968 |
ARUK-UCL |
PMID:28426968 |
RGD:13514087 |
NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
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|
G |
Ttc3 |
tetratricopeptide repeat domain 3 |
involved_in |
ISO |
(PMID:17488780) |
RGD |
PMID:17488780 |
|
NCBI chr11:33,689,119...33,788,976
Ensembl chr11:33,688,952...33,788,975
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|
G |
Hdac6 |
histone deacetylase 6 |
|
IMP |
|
RGD |
PMID:19884510 |
RGD:9681717 |
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
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|
G |
Nrp1 |
neuropilin 1 |
acts_upstream_of_or_within |
IMP ISO |
(PMID:9753685) |
RGD |
PMID:9753685 PMID:9288754 |
RGD:633436 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
|
|
G |
Plxna3 |
plexin A3 |
acts_upstream_of_or_within |
ISO |
MGI:107558|MGI:1096347 (PMID:11683995) |
RGD |
PMID:11683995 |
|
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
|
|
G |
Ryk |
receptor-like tyrosine kinase |
acts_upstream_of_or_within |
ISO |
MGI:98958 (PMID:16723543) |
RGD |
PMID:16723543 |
|
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
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|
G |
Sema3a |
semaphorin 3A |
acts_upstream_of_or_within |
ISO |
MGI:104518|MGI:107683|MGI:96721 (PMID:11683995), (PMID:18550718), (PMID:7748561), (PMID:9753685) |
RGD |
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 |
|
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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|
G |
Sema3f |
semaphorin 3F |
acts_upstream_of_or_within |
ISO |
MGI:107683 (PMID:11683995), (PMID:9753685) |
RGD |
PMID:9753685 PMID:11683995 |
|
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
|
|
G |
Sema5a |
semaphorin 5A |
involved_in |
IMP |
PMID:15603739 |
UniProt |
PMID:15603739 |
RGD:8553809 |
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
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G |
Slit1 |
slit guidance ligand 1 |
|
IDA |
|
RGD |
PMID:15632296 |
RGD:1358459 |
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
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|
G |
Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
(PMID:18716223) |
RGD |
PMID:18716223 |
|
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
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|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
(PMID:18716223) |
RGD |
PMID:18716223 |
|
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
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G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:101766 (PMID:16723543) |
Ensembl RGD |
PMID:16723543 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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|
|
G |
Kiaa0319 |
KIAA0319 homolog |
acts_upstream_of_or_within |
ISO |
(PMID:28334068) MGI:4362922 (PMID:28334068) |
RGD |
PMID:28334068 |
|
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
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|
G |
Tnr |
tenascin R |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2154583 (PMID:16870730) |
Ensembl RGD |
PMID:16870730 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
|
|
|
G |
Bcl11a |
BCL11 transcription factor A |
involved_in |
ISO |
(PMID:19616629) |
RGD |
PMID:19616629 |
|
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
|
|
G |
Epha7 |
Eph receptor A7 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:19036963) |
Ensembl RGD |
PMID:19036963 |
GO_REF:0000107 |
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
|
|
G |
Fgf13 |
fibroblast growth factor 13 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22726441) |
UniProt RGD |
PMID:22726441 |
GO_REF:0000024 |
NCBI chr X:137,276,498...137,800,056
Ensembl chr X:137,276,511...137,800,391
|
|
G |
Fstl4 |
follistatin-like 4 |
acts_upstream_of_or_within |
ISO |
(PMID:24573299) |
RGD |
PMID:24573299 |
|
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
|
|
G |
Ifrd1 |
interferon-related developmental regulator 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97321 (PMID:18052984) |
Ensembl RGD |
PMID:18052984 |
GO_REF:0000107 |
NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
|
|
G |
Ptprs |
protein tyrosine phosphatase, receptor type, S |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:22519304) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:22519304 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
|
|
G |
Rgma |
repulsive guidance molecule BMP co-receptor a |
|
IMP |
|
RGD |
PMID:23744345 |
RGD:9850124 |
NCBI chr 1:127,128,934...127,172,918
Ensembl chr 1:127,128,934...127,172,918
|
|
G |
Ulk1 |
unc-51 like autophagy activating kinase 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:17389358) |
GO_Central RGD |
PMID:17389358 |
GO_REF:0000033 |
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
|
|
G |
Ulk2 |
unc-51 like autophagy activating kinase 2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:17389358) |
GO_Central RGD |
PMID:17389358 |
GO_REF:0000033 |
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
|
|
|
G |
Spart |
spartin |
acts_upstream_of_or_within |
ISO |
MGI:1919205|MGI:5430946 (PMID:22619377) |
RGD |
PMID:22619377 |
|
NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248
|
|
|
G |
Spp1 |
secreted phosphoprotein 1 |
|
IEP |
|
RGD |
PMID:15625076 |
RGD:1581125 |
NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
|
|
|
G |
Atg16l1 |
autophagy related 16-like 1 |
|
IMP |
|
RGD |
PMID:32554807 |
RGD:407532699 |
NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
|
|
G |
Atg7 |
autophagy related 7 |
|
IMP |
|
RGD |
PMID:32554807 |
RGD:407532699 |
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
|
|
G |
Bcl11a |
BCL11 transcription factor A |
|
IMP |
|
RGD |
PMID:19616629 |
RGD:11100018 |
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
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G |
Mecp2 |
methyl CpG binding protein 2 |
|
IMP |
|
RGD |
PMID:24636259 |
RGD:12789709 |
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
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G |
Ostn |
osteocrin |
involved_in |
ISO |
(PMID:27830782) |
RGD |
PMID:27830782 |
|
NCBI chr11:73,442,167...73,478,498
Ensembl chr11:73,442,487...73,468,603
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G |
Pten |
phosphatase and tensin homolog |
|
IMP |
|
RGD |
PMID:23028614 |
RGD:151893507 |
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
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G |
Spag9 |
sperm associated antigen 9 |
|
IMP |
|
RGD |
PMID:19959466 |
RGD:30296662 |
NCBI chr10:78,943,439...79,077,797
Ensembl chr10:78,943,479...79,077,797
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G |
Cfl1 |
cofilin 1 |
|
IMP |
|
RGD |
PMID:24093776 |
RGD:11570550 |
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
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G |
Lhx1 |
LIM homeobox 1 |
involved_in |
ISO |
(PMID:16216236) |
RGD |
PMID:16216236 |
|
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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G |
Adcy10 |
adenylate cyclase 10 |
|
IMP |
|
RGD |
PMID:25009261 |
RGD:329403055 |
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
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G |
Alcam |
activated leukocyte cell adhesion molecule |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
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G |
Aurka |
aurora kinase A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1919369|MGI:1932915|MGI:97602 (PMID:19668197) |
Ensembl RGD |
PMID:19668197 |
GO_REF:0000107 |
NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
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G |
Bcan |
brevican |
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IDA |
|
RGD |
PMID:11208904 |
RGD:14392798 |
NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
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G |
Bdnf |
brain-derived neurotrophic factor |
|
IDA |
|
RGD |
PMID:8469387 |
RGD:8655659 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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G |
Cpne1 |
copine 1 |
involved_in |
ISO IEA |
(PMID:23263657), (PMID:25450385) GO_REF:0000107 |
RGD Ensembl |
PMID:23263657 PMID:25450385 |
GO_REF:0000107 |
NCBI chr 3:144,587,531...144,629,911
Ensembl chr 3:144,588,995...144,598,636
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G |
Csf1r |
colony stimulating factor 1 receptor |
|
IMP |
|
RGD |
PMID:33450391 |
RGD:126781687 |
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
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G |
Ctnnb1 |
catenin beta 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:19830702) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:19830702 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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G |
Ddr1 |
discoidin domain receptor tyrosine kinase 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:10970885) GO_REF:0000107 |
RGD Ensembl |
PMID:10970885 |
GO_REF:0000107 |
NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
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G |
Eif2ak4 |
eukaryotic translation initiation factor 2 alpha kinase 4 |
involved_in |
ISO |
(PMID:23447528) |
RGD |
PMID:23447528 |
|
NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
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|
G |
Emx1 |
empty spiracles homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:894681 (PMID:23861879) |
RGD |
PMID:23861879 |
|
NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
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|
G |
Flrt1 |
fibronectin leucine rich transmembrane protein 1 |
involved_in |
ISO |
(PMID:20421966) |
RGD |
PMID:20421966 |
|
NCBI chr 1:204,275,785...204,292,844
Ensembl chr 1:204,275,367...204,353,750
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G |
Flrt3 |
fibronectin leucine rich transmembrane protein 3 |
involved_in |
ISO IMP |
(PMID:14706654) PMID:15485775 |
RGD |
PMID:14706654 PMID:15485775 |
RGD:1579783 |
NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
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|
G |
Garem2 |
GRB2 associated regulator of MAPK1 subtype 2 |
acts_upstream_of_or_within |
ISO |
(PMID:31718706) |
RGD |
PMID:31718706 |
|
NCBI chr 6:26,228,965...26,255,576
Ensembl chr 6:26,230,048...26,241,762
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|
G |
Impact |
impact RWD domain protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:23447528) |
UniProt RGD |
PMID:23447528 |
GO_REF:0000024 |
NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569
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G |
Iqgap1 |
IQ motif containing GTPase activating protein 1 |
involved_in |
ISO |
(PMID:15695813) |
RGD |
PMID:15695813 |
|
NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
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G |
Itga4 |
integrin subunit alpha 4 |
|
IMP |
|
RGD |
PMID:16181811 |
RGD:13593536 |
NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
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G |
Jade2 |
jade family PHD finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:1196256 (PMID:25018020) |
RGD |
PMID:25018020 |
|
NCBI chr10:36,075,239...36,124,210
Ensembl chr10:36,078,917...36,116,984
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|
G |
Kdm1a |
lysine demethylase 1A |
acts_upstream_of_or_within |
ISO |
MGI:1924151 (PMID:25018020) |
RGD |
PMID:25018020 |
|
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
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|
G |
Ndel1 |
nudE neurodevelopment protein 1-like 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1919369|MGI:894678|MGI:97602 (PMID:19668197) |
Ensembl RGD |
PMID:19668197 |
GO_REF:0000107 |
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
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|
G |
Nrn1 |
neuritin 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:18265009) |
GO_Central RGD |
PMID:18265009 |
GO_REF:0000033 |
NCBI chr17:28,129,969...28,138,898
Ensembl chr17:28,129,977...28,138,896
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G |
Nrn1l |
neuritin 1-like |
acts_upstream_of_or_within |
ISO |
(PMID:18265009) |
RGD |
PMID:18265009 |
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NCBI chr19:33,786,419...33,787,879
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G |
Pak6 |
p21 (RAC1) activated kinase 6 |
acts_upstream_of_or_within |
ISO |
(PMID:29117290) |
RGD |
PMID:29117290 |
|
NCBI chr 3:105,638,248...105,674,399
Ensembl chr 3:105,638,653...105,672,975
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G |
Plxna1 |
plexin A1 |
acts_upstream_of_or_within |
ISO |
MGI:107555|MGI:107683 (PMID:21835343) |
RGD |
PMID:21835343 |
|
NCBI chr 4:121,737,934...121,782,901
Ensembl chr 4:121,737,945...122,024,196
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|
G |
Plxna3 |
plexin A3 |
acts_upstream_of_or_within |
ISO |
MGI:107555|MGI:107685 (PMID:21835343) |
RGD |
PMID:21835343 |
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NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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G |
Postn |
periostin |
|
IMP |
|
RGD |
PMID:24523534 |
RGD:10041019 |
NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
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|
G |
Prickle1 |
prickle planar cell polarity protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:4941929 (PMID:28837644) |
Ensembl RGD |
PMID:28837644 |
GO_REF:0000107 |
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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G |
Prkcz |
protein kinase C, zeta |
acts_upstream_of_or_within |
ISO |
MGI:1919369|MGI:1932915|MGI:894678 (PMID:19668197) |
RGD |
PMID:19668197 |
|
NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
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G |
Rbm12 |
RNA binding motif protein 12 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:144,609,661...144,629,911
Ensembl chr 3:144,611,623...144,629,915
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G |
Robo1 |
roundabout guidance receptor 1 |
|
IMP |
|
RGD |
PMID:26738857 |
RGD:243048441 |
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
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|
G |
S100b |
S100 calcium binding protein B |
involved_in |
ISO |
(PMID:2592414) |
RGD |
PMID:2592414 |
|
NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
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|
G |
Sema5a |
semaphorin 5A |
acts_upstream_of_or_within |
ISO |
MGI:107683|MGI:107685 (PMID:21835343) |
RGD |
PMID:21835343 |
|
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
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|
G |
Sema5b |
semaphorin 5B |
acts_upstream_of_or_within |
ISO |
MGI:107683|MGI:107685 (PMID:21835343) |
RGD |
PMID:21835343 |
|
NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311
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G |
Slit2 |
slit guidance ligand 2 |
|
IMP |
|
RGD |
PMID:26738857 |
RGD:243048441 |
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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G |
Slitrk1 |
SLIT and NTRK-like family, member 1 |
acts_upstream_of_or_within |
ISO |
(PMID:36085162) |
RGD |
PMID:36085162 |
|
NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
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G |
Spag6 |
sperm associated antigen 6 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:81,352,372...81,401,504
Ensembl chr17:81,349,084...81,401,501
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G |
Spag6l |
sperm associated antigen 6-like |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2662475 (PMID:28819108) |
GO_Central RGD |
PMID:28819108 |
GO_REF:0000033 |
NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
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G |
St8sia2 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 |
|
IMP |
|
RGD |
PMID:16887122 |
RGD:27372880 |
NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091
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G |
Tiam1 |
TIAM Rac1 associated GEF 1 |
|
IMP |
|
RGD |
PMID:20333299 |
RGD:10043323 |
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
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G |
Tnn |
tenascin N |
involved_in |
ISO IBA |
GO_REF:0000024 GO_REF:0000033 (PMID:12812753) |
UniProt GO_Central RGD |
PMID:12812753 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
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|
G |
Tsc22d4 |
TSC22 domain family, member 4 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:20878296) |
UniProt RGD |
PMID:20878296 |
GO_REF:0000024 |
NCBI chr12:18,939,150...18,952,008
Ensembl chr12:18,914,398...18,952,008
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G |
Usp9x |
ubiquitin specific peptidase 9, X-linked |
acts_upstream_of_or_within |
ISO |
MGI:95387 (PMID:23861879) |
RGD |
PMID:23861879 |
|
NCBI chr X:9,588,825...9,726,993
Ensembl chr X:9,588,825...9,696,711
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G |
Adcy10 |
adenylate cyclase 10 |
|
IMP |
|
RGD |
PMID:22649251 |
RGD:329347828 |
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
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G |
Adnp |
activity-dependent neuroprotector homeobox |
|
IDA |
|
RGD |
PMID:19047645 |
RGD:2312772 |
NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
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G |
Anapc2 |
anaphase promoting complex subunit 2 |
|
IMP |
|
RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
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G |
Apoe |
apolipoprotein E |
|
IDA |
|
RGD |
PMID:21040802 |
RGD:6904146 |
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
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G |
Arhgap32 |
Rho GTPase activating protein 32 |
|
IMP |
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454
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G |
Atp5mc1 |
ATP synthase membrane subunit c locus 1 |
|
IMP |
|
RGD |
PMID:22209705 |
RGD:13800744 |
NCBI chr10:81,024,056...81,026,780
Ensembl chr10:81,023,925...81,027,124 Ensembl chr10:81,023,925...81,027,124
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G |
Bdnf |
brain-derived neurotrophic factor |
NOT|acts_upstream_of_or_within |
ISO |
(PMID:24573299) |
RGD |
PMID:24573299 |
|
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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G |
Cdh4 |
cadherin 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:14586016) |
Ensembl RGD |
PMID:14586016 |
GO_REF:0000107 |
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
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G |
Cdkl5 |
cyclin-dependent kinase-like 5 |
involved_in |
IMP IBA |
PMID:20861382 GO_REF:0000033 |
GO_Central |
PMID:20861382 |
GO_REF:0000033, RGD:8554575 |
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
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G |
Ctnnd2 |
catenin delta 2 |
|
IMP |
|
RGD |
PMID:32554807 |
RGD:407532699 |
NCBI chr 2:81,168,525...82,016,495
Ensembl chr 2:81,167,117...82,015,764
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G |
Cyfip1 |
cytoplasmic FMR1 interacting protein 1 |
|
IMP |
|
RGD |
PMID:16260607 |
RGD:11557987 |
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
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G |
Dbn1 |
drebrin 1 |
involved_in |
IMP IBA |
GO_REF:0000033 |
GO_Central RGD |
PMID:19222710 |
GO_REF:0000033, RGD:10395284 |
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
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G |
Dbnl |
drebrin-like |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
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G |
Disc1 |
DISC1 scaffold protein |
|
IMP |
|
RGD |
PMID:17202468 |
RGD:4107038 |
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
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G |
Eif2b2 |
eukaryotic translation initiation factor 2B subunit beta |
|
IMP |
|
RGD |
PMID:23616526 |
RGD:11041877 |
NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
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G |
Eif4g2 |
eukaryotic translation initiation factor 4, gamma 2 |
|
IMP |
|
RGD |
PMID:23616526 |
RGD:11041877 |
NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
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G |
Ep300 |
E1A binding protein p300 |
|
IMP |
|
RGD |
PMID:19339625 |
RGD:2308917 |
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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G |
Fn1 |
fibronectin 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:12879062) |
Ensembl RGD |
PMID:12879062 |
GO_REF:0000107 |
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
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G |
Fxn |
frataxin |
|
IMP |
|
RGD |
PMID:18809400 |
RGD:2306797 |
NCBI chr 1:221,874,007...221,897,543
Ensembl chr 1:221,872,420...221,897,540
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G |
Gdi1 |
GDP dissociation inhibitor 1 |
|
IMP |
|
RGD |
PMID:9620768 |
RGD:13208823 |
NCBI chr X:152,087,611...152,094,274
Ensembl chr X:152,087,444...152,094,272
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|
G |
Golga4 |
golgin A4 |
involved_in |
ISO |
(PMID:22705394) |
RGD |
PMID:22705394 |
|
NCBI chr 8:118,208,200...118,285,003
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|
G |
Gsk3b |
glycogen synthase kinase 3 beta |
acts_upstream_of_or_within |
ISO |
MGI:106658|MGI:98927 (PMID:24623780) |
RGD |
PMID:24623780 |
|
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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G |
Ilk |
integrin-linked kinase |
|
IMP |
shorter axons following Ilk inhibition or knock-down |
RGD |
PMID:17490631 |
RGD:2301744 |
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
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|
G |
Islr2 |
immunoglobulin superfamily containing leucine-rich repeat 2 |
involved_in |
IBA ISO |
GO_REF:0000033 (PMID:19755105) |
GO_Central RGD |
PMID:19755105 |
GO_REF:0000033 |
NCBI chr 8:58,608,165...58,616,246
Ensembl chr 8:58,608,709...58,614,650
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|
G |
L1cam |
L1 cell adhesion molecule |
involved_in |
IMP |
PMID:18519736 |
UniProt |
PMID:18519736 |
RGD:10054086 |
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
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G |
Limk1 |
LIM domain kinase 1 |
involved_in acts_upstream_of_or_within |
ISS ISO IEA |
GO_REF:0000024 MGI:1921382 (PMID:16204183) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:16204183 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
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G |
Lrp1 |
LDL receptor related protein 1 |
|
IMP |
|
RGD |
PMID:21040802 |
RGD:6904146 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
|
|
G |
Macf1 |
microtubule-actin crosslinking factor 1 |
involved_in |
ISO |
(PMID:22705394) |
RGD |
PMID:22705394 |
|
NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
|
|
G |
Map1b |
microtubule-associated protein 1B |
|
IMP |
|
RGD |
PMID:8838670 |
RGD:2304034 |
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
|
|
G |
Map3k13 |
mitogen-activated protein kinase kinase kinase 13 |
involved_in |
ISO |
(PMID:27511108) |
RGD |
PMID:27511108 |
|
NCBI chr11:79,094,087...79,235,181
Ensembl chr11:79,097,247...79,235,181
|
|
G |
Mapt |
microtubule-associated protein tau |
involved_in |
ISO ISS |
(PMID:1389180) GO_REF:0000024 |
RGD UniProt |
PMID:1389180 |
GO_REF:0000024 |
NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
|
|
G |
Myo5b |
myosin Vb |
|
IMP |
|
RGD |
PMID:23770993 |
RGD:11533641 |
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
|
|
G |
Ndel1 |
nudE neurodevelopment protein 1-like 1 |
|
IMP |
|
RGD |
PMID:17202468 |
RGD:4107038 |
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
|
|
G |
Ngf |
nerve growth factor |
acts_upstream_of_or_within |
ISO |
(PMID:18052984), (PMID:8861722) |
RGD |
PMID:8861722 PMID:18052984 |
|
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
|
|
G |
Ntn1 |
netrin 1 |
involved_in acts_upstream_of_or_within |
IDA ISO IEA |
PMID:23453953 (PMID:10704383) GO_REF:0000107 |
RGD Ensembl |
PMID:10704383 PMID:23453953 |
GO_REF:0000107, RGD:10054078 |
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
|
|
G |
Pafah1b1 |
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 |
|
IMP |
|
RGD |
PMID:17522326 PMID:17202468 |
RGD:4107033, RGD:4107038 |
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
|
|
G |
Pak1 |
p21 (RAC1) activated kinase 1 |
|
IMP |
|
RGD |
PMID:23453953 |
RGD:10054078 |
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
|
|
G |
Pou4f2 |
POU class 4 homeobox 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:10357904) |
UniProt RGD |
PMID:10357904 |
GO_REF:0000024 |
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
|
|
G |
Rpl4 |
ribosomal protein L4 |
|
IMP |
|
RGD |
PMID:10964612 |
RGD:11039443 |
NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
|
|
G |
Rufy3 |
RUN and FYVE domain containing 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:24720729) |
UniProt RGD |
PMID:24720729 |
GO_REF:0000024 |
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
|
|
G |
Sema7a |
semaphorin 7A (John Milton Hagen blood group) |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:12879062) |
RGD |
PMID:12879062 |
|
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
|
|
G |
Shtn1 |
shootin 1 |
involved_in |
IDA |
PMID:23453953 PMID:18519736 |
UniProt |
PMID:23453953 PMID:18519736 |
RGD:10054078, RGD:10054086 |
NCBI chr 1:258,121,966...258,225,861
Ensembl chr 1:258,121,968...258,228,265
|
|
G |
Smurf1 |
SMAD specific E3 ubiquitin protein ligase 1 |
|
IMP |
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
|
|
G |
Srf |
serum response factor |
acts_upstream_of_or_within |
ISO |
MGI:1861437|MGI:3522206|MGI:98927 (PMID:24623780) |
RGD |
PMID:24623780 |
|
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
|
|
G |
Tnfrsf12a |
TNF receptor superfamily member 12A |
acts_upstream_of_or_within |
ISO |
(PMID:14573547) |
RGD |
PMID:14573547 |
|
NCBI chr10:12,707,077...12,709,071
Ensembl chr10:12,689,890...12,709,045
|
|
G |
Trpc5 |
transient receptor potential cation channel, subfamily C, member 5 |
|
IMP |
|
RGD |
PMID:21984481 |
RGD:10043835 |
NCBI chr X:107,946,163...108,230,991
Ensembl chr X:107,939,131...108,230,991
|
|
G |
Trpv2 |
transient receptor potential cation channel, subfamily V, member 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:20357111) |
Ensembl RGD |
PMID:20357111 |
GO_REF:0000107 |
NCBI chr10:47,265,524...47,294,263
Ensembl chr10:47,272,931...47,294,260
|
|
G |
Twf2 |
twinfilin actin-binding protein 2 |
involved_in |
ISO |
(PMID:17910947) |
RGD |
PMID:17910947 |
|
NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
|
|
G |
Zfyve27 |
zinc finger FYVE-type containing 27 |
involved_in |
ISS ISO IBA IEA |
GO_REF:0000024 (PMID:24251978) GO_REF:0000033 GO_REF:0000107 |
UniProt RGD GO_Central Ensembl |
PMID:24251978 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:240,979,831...241,003,193
Ensembl chr 1:240,979,842...241,003,193
|
|
|
G |
Bmpr2 |
bone morphogenetic protein receptor type 2 |
involved_in |
ISO |
UniProtKB:O35607 (PMID:24052814) |
RGD |
PMID:24052814 |
|
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
|
|
G |
Cxcl12 |
C-X-C motif chemokine ligand 12 |
|
IMP |
|
RGD |
PMID:18701697 |
RGD:2306571 |
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
|
|
G |
Dscam |
DS cell adhesion molecule |
involved_in |
ISO IBA IEA IMP |
(PMID:18585357) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:18585357 PMID:18585357 |
GO_REF:0000033 GO_REF:0000107, RGD:8553710 |
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
|
|
G |
Megf8 |
multiple EGF-like-domains 8 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:24052814) GO_REF:0000107 |
CAFA RGD Ensembl |
PMID:24052814 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
|
|
G |
Nrp1 |
neuropilin 1 |
involved_in |
ISO |
(PMID:21658587) |
RGD |
PMID:21658587 |
|
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
|
|
G |
Sema5a |
semaphorin 5A |
involved_in |
IMP |
PMID:15603739 |
UniProt |
PMID:15603739 |
RGD:8553809 |
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
|
|
G |
Vegfa |
vascular endothelial growth factor A |
NOT|involved_in |
ISO |
(PMID:21658587) |
RGD |
PMID:21658587 |
|
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
|
|
|
G |
Lrp1 |
LDL receptor related protein 1 |
|
IDA |
|
RGD |
PMID:23867460 |
RGD:13800520 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
|
|
G |
Ntrk3 |
neurotrophic receptor tyrosine kinase 3 |
acts_upstream_of_or_within |
ISO |
MGI:97380 (PMID:16142215) |
RGD |
PMID:16142215 |
|
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
|
|
|
G |
Bcl11a |
BCL11 transcription factor A |
involved_in |
ISO |
(PMID:19616629) |
RGD |
PMID:19616629 |
|
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
|
|
G |
Bdnf |
brain-derived neurotrophic factor |
involved_in acts_upstream_of_or_within |
ISO IEA |
(PMID:19036963) (PMID:24573299) GO_REF:0000107 |
RGD Ensembl |
PMID:19036963 PMID:24573299 |
GO_REF:0000107 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
|
|
G |
Crabp2 |
cellular retinoic acid binding protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:18052984) |
Ensembl RGD |
PMID:18052984 |
GO_REF:0000107 |
NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
|
|
G |
Dcx |
doublecortin |
|
IMP |
|
RGD |
PMID:19726658 |
RGD:12904759 |
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
|
|
G |
Efna5 |
ephrin A5 |
involved_in |
ISO |
(PMID:19036963) |
RGD |
PMID:19036963 |
|
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
|
|
G |
Ist1 |
IST1 factor associated with ESCRT-III |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2139806 (PMID:22619377) |
Ensembl RGD |
PMID:22619377 |
GO_REF:0000107 |
NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956
|
|
G |
Lpar3 |
lysophosphatidic acid receptor 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:22465231) |
Ensembl RGD |
PMID:22465231 |
GO_REF:0000107 |
NCBI chr 2:235,125,234...235,193,916
Ensembl chr 2:235,149,065...235,193,357
|
|
G |
Ngf |
nerve growth factor |
acts_upstream_of_or_within |
ISO |
(PMID:18052984) |
RGD |
PMID:18052984 |
|
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
|
|
G |
Rnd2 |
Rho family GTPase 2 |
acts_upstream_of_or_within |
ISO |
(PMID:22465231) |
RGD |
PMID:22465231 |
|
NCBI chr10:86,399,151...86,402,750
Ensembl chr10:86,399,148...86,402,742
|
|
G |
Sema4d |
semaphorin 4D |
involved_in |
ISO |
(PMID:19788569) |
RGD |
PMID:19788569 |
|
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
|
|
|
G |
Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
(PMID:18716223) |
RGD |
PMID:18716223 |
|
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
|
|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
(PMID:18716223) |
RGD |
PMID:18716223 |
|
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
|
|
|
G |
Lrp1 |
LDL receptor related protein 1 |
|
IDA |
|
RGD |
PMID:23867460 |
RGD:13800520 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
|
|
|
G |
Afdn |
afadin, adherens junction formation factor |
|
IMP |
|
RGD |
PMID:22948147 |
RGD:13838731 |
NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
|
|
G |
Cacng7 |
calcium voltage-gated channel auxiliary subunit gamma 7 |
|
IMP |
|
RGD |
PMID:21610096 |
RGD:13524563 |
NCBI chr 1:65,800,059...65,831,246
Ensembl chr 1:65,800,355...65,831,006
|
|
G |
Cpne5 |
copine 5 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr20:7,206,742...7,289,309
Ensembl chr20:7,206,742...7,288,883
|
|
G |
Cpne6 |
copine 6 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr15:28,998,293...29,005,044
Ensembl chr15:28,998,293...29,005,044
|
|
G |
Cpne9 |
copine family member 9 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:23999003) |
Ensembl RGD |
PMID:23999003 |
GO_REF:0000107 |
NCBI chr 4:146,429,961...146,454,335
Ensembl chr 4:146,430,792...146,454,333
|
|
G |
Cxcr4 |
C-X-C motif chemokine receptor 4 |
|
IMP |
|
RGD |
PMID:28104461 |
RGD:13463105 |
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
|
|
G |
Hnrnpk |
heterogeneous nuclear ribonucleoprotein K |
|
IMP |
|
RGD |
PMID:24990929 |
RGD:10002784 |
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
|
|
G |
Itsn2 |
intersectin 2 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr 6:27,616,645...27,727,373
Ensembl chr 6:27,600,406...27,727,124
|
|
G |
Mecp2 |
methyl CpG binding protein 2 |
|
IMP |
|
RGD |
PMID:19442733 |
RGD:11069248 |
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
|
|
G |
Mir222 |
microRNA 222 |
|
IMP |
|
RGD |
PMID:23028614 |
RGD:151893507 |
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
|
|
G |
Mul1 |
mitochondrial E3 ubiquitin protein ligase 1 |
involved_in |
ISO |
UniProtKB:Q9WVS6 (PMID:24898855) |
RGD |
PMID:24898855 |
|
NCBI chr 5:150,652,812...150,661,863
Ensembl chr 5:150,652,812...150,661,863
|
|
G |
Nedd4l |
NEDD4 like E3 ubiquitin protein ligase |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr18:58,393,759...58,726,709
Ensembl chr18:58,393,509...58,723,137
|
|
G |
Picalm |
phosphatidylinositol binding clathrin assembly protein |
|
IMP |
|
RGD |
PMID:18842885 |
RGD:8554167 |
NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
|
|
G |
Plaa |
phospholipase A2, activating protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:28413018) |
UniProt RGD |
PMID:28413018 |
GO_REF:0000024 |
NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
|
|
G |
Prkn |
parkin RBR E3 ubiquitin protein ligase |
involved_in |
IEA ISO |
GO_REF:0000107 UniProtKB:Q8VCM5 (PMID:24898855) |
Ensembl RGD |
PMID:24898855 |
GO_REF:0000107 |
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
|
|
G |
Rasal1 |
RAS protein activator like 1 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr12:35,881,269...35,913,727
Ensembl chr12:35,881,270...35,913,727
|
|
G |
Reg1a |
regenerating family member 1 alpha |
|
IMP |
|
RGD |
PMID:22158612 |
RGD:9850120 |
NCBI chr 4:110,892,451...110,895,115
Ensembl chr 4:110,892,453...110,895,570
|
|
G |
Rims1 |
regulating synaptic membrane exocytosis 1 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr 9:24,696,959...25,196,404
Ensembl chr 9:24,698,854...25,196,631
|
|
G |
Rims2 |
regulating synaptic membrane exocytosis 2 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
|
|
G |
Rnf157 |
ring finger protein 157 |
involved_in |
IMP |
PMID:25342469 |
UniProt |
PMID:25342469 |
RGD:13825435 |
NCBI chr10:101,571,972...101,639,874
Ensembl chr10:101,566,295...101,639,942
|
|
G |
Sh3glb1 |
SH3 domain -containing GRB2-like endophilin B1 |
|
IMP |
|
RGD |
PMID:18768694 |
RGD:13504749 |
NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
|
|
G |
Slc23a2 |
solute carrier family 23 member 2 |
|
IMP |
|
RGD |
PMID:27085842 |
RGD:26884454 |
NCBI chr 3:119,302,651...119,395,289
Ensembl chr 3:119,302,666...119,460,343
|
|
G |
Smurf1 |
SMAD specific E3 ubiquitin protein ligase 1 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
|
|
G |
Syt1 |
synaptotagmin 1 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
|
|
G |
Syt17 |
synaptotagmin 17 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr 1:172,695,275...172,761,906
Ensembl chr 1:172,696,120...172,761,960
|
|
G |
Syt2 |
synaptotagmin 2 |
involved_in |
ISO IEA |
(PMID:23999003) GO_REF:0000107 |
RGD Ensembl |
PMID:23999003 |
GO_REF:0000107 |
NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
|
|
G |
Syt3 |
synaptotagmin 3 |
involved_in |
ISO IEA |
(PMID:23999003) GO_REF:0000107 |
RGD Ensembl |
PMID:23999003 |
GO_REF:0000107 |
NCBI chr 1:94,880,835...94,895,518
Ensembl chr 1:94,881,247...94,895,246
|
|
G |
Syt4 |
synaptotagmin 4 |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
|
|
G |
Unc13a |
unc-13 homolog A |
involved_in |
ISO |
(PMID:23999003) |
RGD |
PMID:23999003 |
|
NCBI chr16:18,333,910...18,381,813
Ensembl chr16:18,336,229...18,381,872
|
|
G |
Wnt5a |
Wnt family member 5A |
|
IMP |
|
RGD |
PMID:25424568 |
RGD:11060597 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Pum2 |
pumilio RNA-binding family member 2 |
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IMP |
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RGD |
PMID:31606248 |
RGD:242905203 |
NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
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Sirt6 |
sirtuin 6 |
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IMP |
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RGD |
PMID:22335191 |
RGD:9586060 |
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
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Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:10208740) |
Ensembl RGD |
PMID:10208740 |
GO_REF:0000107 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Lzts2 |
leucine zipper tumor suppressor 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:5302222 (PMID:21949185) |
Ensembl RGD |
PMID:21949185 |
GO_REF:0000107 |
NCBI chr 1:243,876,665...243,888,489
Ensembl chr 1:243,880,022...243,888,423
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Esr1 |
estrogen receptor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2150897 (PMID:18535112) |
Ensembl RGD |
PMID:18535112 |
GO_REF:0000107 |
NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
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Fgfr2 |
fibroblast growth factor receptor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3044679 (PMID:17215304) |
RGD |
PMID:17215304 |
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NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:15013801) |
Ensembl RGD |
PMID:15013801 |
GO_REF:0000107 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Abl1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
involved_in |
ISO |
(PMID:24520051) |
RGD |
PMID:24520051 |
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NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
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Barhl2 |
BarH-like homeobox 2 |
acts_upstream_of_or_within |
ISO |
(PMID:12657654) |
RGD |
PMID:12657654 |
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NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353
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Bdnf |
brain-derived neurotrophic factor |
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IMP |
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RGD |
PMID:14697662 |
RGD:8655852 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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Clasp2 |
cytoplasmic linker associated protein 2 |
involved_in |
ISO |
(PMID:24520051) |
RGD |
PMID:24520051 |
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NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
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Cttn |
cortactin |
involved_in |
IMP |
PMID:21210813 |
UniProt |
PMID:21210813 |
RGD:10047315 |
NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
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Dnm2 |
dynamin 2 |
involved_in |
IMP |
PMID:21210813 |
UniProt |
PMID:21210813 |
RGD:10047315 |
NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
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Dpysl2 |
dihydropyrimidinase-like 2 |
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NAS |
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RGD |
PMID:7472434 |
RGD:728576 |
NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829
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Gsk3b |
glycogen synthase kinase 3 beta |
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IMP |
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RGD |
PMID:15652487 |
RGD:10045567 |
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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Mgll |
monoglyceride lipase |
acts_upstream_of_or_within |
ISO |
(PMID:20962221) |
RGD |
PMID:20962221 |
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NCBI chr 4:121,192,186...121,294,187
Ensembl chr 4:121,192,195...121,294,179
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Nkx6-1 |
NK6 homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2386119 (PMID:19592574) |
RGD |
PMID:19592574 |
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NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
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Olfm1 |
olfactomedin 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22923615) |
UniProt RGD |
PMID:22923615 |
GO_REF:0000024 |
NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
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Rab21 |
RAB21, member RAS oncogene family |
involved_in |
IDA |
PMID:19745841 |
UniProt |
PMID:19745841 |
RGD:8554110 |
NCBI chr 7:50,904,050...50,928,890
Ensembl chr 7:50,904,057...50,928,839
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Sin3a |
SIN3 transcription regulator family member A |
involved_in |
ISO |
(PMID:27399968) |
RGD |
PMID:27399968 |
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NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
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Smurf1 |
SMAD specific E3 ubiquitin protein ligase 1 |
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ISO |
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RGD |
PMID:17728459 |
RGD:2302549 |
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
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Ttl |
tubulin tyrosine ligase |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3584264 (PMID:15899979) |
Ensembl RGD |
PMID:15899979 |
GO_REF:0000107 |
NCBI chr 3:116,298,813...116,328,538
Ensembl chr 3:116,298,797...116,328,538
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Wdr36 |
WD repeat domain 36 |
acts_upstream_of_or_within |
ISO |
(PMID:20631153) |
RGD |
PMID:20631153 |
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NCBI chr18:24,473,657...24,501,773
Ensembl chr18:24,473,663...24,508,092
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Nrp1 |
neuropilin 1 |
acts_upstream_of_or_within |
ISO |
(PMID:15814794) |
RGD |
PMID:15814794 |
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NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Plxna4 |
plexin A4 |
acts_upstream_of_or_within |
ISO |
MGI:3578655 (PMID:15814794) |
RGD |
PMID:15814794 |
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NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
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Sema3a |
semaphorin 3A |
involved_in |
ISO |
(PMID:18053124) (PMID:15155748) |
RGD |
PMID:15155748 PMID:18053124 |
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NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Hnf1b |
HNF1 homeobox B |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857856 (PMID:20040500) |
Ensembl RGD |
PMID:20040500 |
GO_REF:0000107 |
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
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Six1 |
SIX homeobox 1 |
involved_in |
ISO |
(PMID:17300925) |
RGD |
PMID:17300925 |
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NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
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Six4 |
SIX homeobox 4 |
involved_in |
ISO |
(PMID:17300925) |
RGD |
PMID:17300925 |
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NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992
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Ppp2r3a |
protein phosphatase 2, regulatory subunit B'', alpha |
involved_in |
ISO IBA |
UniProtKB:A0A803JG39 (PMID:15687260) GO_REF:0000033 |
RGD GO_Central |
PMID:15687260 |
GO_REF:0000033 |
NCBI chr 8:101,703,512...101,841,530
Ensembl chr 8:101,704,778...101,841,502
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Bdnf |
brain-derived neurotrophic factor |
acts_upstream_of_or_within |
ISO |
MGI:2443199 (PMID:24573299) |
RGD |
PMID:24573299 |
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NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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Fstl4 |
follistatin-like 4 |
acts_upstream_of_or_within |
ISO |
MGI:88145 (PMID:24573299) |
RGD |
PMID:24573299 |
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NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
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Omg |
oligodendrocyte-myelin glycoprotein |
acts_upstream_of_or_within |
ISO |
MGI:3821628 (PMID:18692574) |
RGD |
PMID:18692574 |
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NCBI chr10:64,461,350...64,464,084
Ensembl chr10:64,461,350...64,464,084
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Clstn3 |
calsyntenin 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:31043739) |
UniProt RGD |
PMID:31043739 |
GO_REF:0000024 |
NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769
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Nrp1 |
neuropilin 1 |
involved_in |
ISO |
(PMID:22790009) |
RGD |
PMID:22790009 |
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NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Nrp2 |
neuropilin 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:22790009) |
Ensembl RGD |
PMID:22790009 |
GO_REF:0000107 |
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
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S100b |
S100 calcium binding protein B |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:31043739) |
UniProt RGD |
PMID:31043739 |
GO_REF:0000024 |
NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
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Sema3a |
semaphorin 3A |
involved_in |
ISO |
(PMID:22790009) |
RGD |
PMID:22790009 |
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NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema3f |
semaphorin 3F |
involved_in |
ISO |
(PMID:22790009) |
RGD |
PMID:22790009 |
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NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
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Bin3 |
bridging integrator 3 |
involved_in |
ISO |
(PMID:11274158) |
RGD |
PMID:11274158 |
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NCBI chr15:45,173,725...45,212,607
Ensembl chr15:45,173,732...45,212,604
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Cadm1 |
cell adhesion molecule 1 |
acts_upstream_of_or_within |
ISO |
MGI:3769418 (PMID:18055550) |
RGD |
PMID:18055550 |
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NCBI chr 8:47,847,836...48,178,703
Ensembl chr 8:47,847,325...48,182,833
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Epb41l5 |
erythrocyte membrane protein band 4.1 like 5 |
acts_upstream_of_or_within |
ISO |
(PMID:20103536) |
RGD |
PMID:20103536 |
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NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
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Hnf1b |
HNF1 homeobox B |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857856 (PMID:20040500) |
Ensembl RGD |
PMID:20040500 |
GO_REF:0000107 |
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
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Fmn1 |
formin 1 |
acts_upstream_of_or_within |
ISO |
(PMID:7517224) |
RGD |
PMID:7517224 |
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NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220
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Kif26b |
kinesin family member 26B |
acts_upstream_of_or_within |
ISO |
MGI:4459557 (PMID:20439720) |
RGD |
PMID:20439720 |
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NCBI chr13:90,282,821...90,689,058
Ensembl chr13:90,283,404...90,682,811
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Sall1 |
spalt-like transcription factor 1 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:2388379 (PMID:16839447) (PMID:11688560), (PMID:16839447) |
RGD |
PMID:11688560 PMID:16839447 |
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NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
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Term paths to the root
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