Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:respiratory system development
go back to main search page
Accession:GO:0060541 term browser browse the term
Definition:The progression of the respiratory system over time from its formation to its mature structure. The respiratory system carries out respiratory gaseous exchange.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
respiratory system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287183) Ensembl
MGI		 PMID:11287183 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chrNW_004624800:1,426,773...1,431,510
Ensembl chrNW_004624800:1,426,998...1,431,631 		JBrowse link
G Phox2b paired like homeobox 2B involved_in ISO (MGI:4418003|PMID:19940179) BHF-UCL PMID:19940179 MGI:4418003 NCBI chrNW_004624761:25,234,048...25,238,725
Ensembl chrNW_004624761:25,234,372...25,237,102 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22945695) Ensembl
MGI		 PMID:22945695 GO_REF:0000107 NCBI chrNW_004624746:17,857,779...17,948,469
Ensembl chrNW_004624746:17,920,835...17,948,468 		JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO (PMID:21715716) MGI PMID:21715716 NCBI chrNW_004624759:19,135,629...19,298,966 JBrowse link
G Speg striated muscle enriched protein kinase acts_upstream_of_or_within ISO (PMID:19118250) MGI PMID:19118250 NCBI chrNW_004624823:5,563,687...5,618,786
Ensembl chrNW_004624823:5,564,550...5,618,786 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287183) Ensembl
MGI		 PMID:11287183 GO_REF:0000107 NCBI chrNW_004624751:20,091,612...20,096,581
Ensembl chrNW_004624751:20,091,609...20,096,563 		JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10572052) Ensembl
MGI		 PMID:10572052 GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO (PMID:24302887) MGI PMID:24302887 NCBI chrNW_004624762:9,901,021...10,303,217
Ensembl chrNW_004624762:9,970,904...10,303,046 		JBrowse link
alveolar primary septum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:304,890...413,655
Ensembl chrNW_004624781:389,481...413,728 		JBrowse link
alveolar secondary septum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:9716527) MGI PMID:9716527 NCBI chrNW_004624755:25,633,690...25,647,361
Ensembl chrNW_004624755:25,635,165...25,646,932 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (PMID:9716527) MGI PMID:9716527 NCBI chrNW_004624733:12,964,893...12,979,198
Ensembl chrNW_004624733:12,964,746...12,976,732 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:28818870) MGI PMID:28818870 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO (PMID:16214823) MGI PMID:16214823 NCBI chrNW_004624955:234,289...239,541
Ensembl chrNW_004624955:231,506...239,508 		JBrowse link
bronchiole development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441679) Ensembl
MGI		 PMID:9441679 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Itgb6 integrin subunit beta 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12634787) Ensembl
MGI		 PMID:12634787 GO_REF:0000107 NCBI chrNW_004624732:5,348,589...5,499,826
Ensembl chrNW_004624732:5,403,956...5,499,855 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12634787) Ensembl
MGI		 PMID:12634787 GO_REF:0000107 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445 		JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10572052) Ensembl
MGI		 PMID:10572052 GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12634787) Ensembl
MGI		 PMID:12634787 GO_REF:0000107 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605 		JBrowse link
bronchiole morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15800000) Ensembl
MGI		 PMID:15800000 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
bronchus cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
bronchus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:18990706) MGI PMID:18990706 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
bronchus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:18990706) MGI PMID:18990706 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chrNW_004624860:232,838...301,299
Ensembl chrNW_004624860:232,936...299,225 		JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21764747) Ensembl
MGI		 PMID:21764747 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16989802) MGI PMID:16989802 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) MGI PMID:17473173 NCBI chrNW_004624744:17,838,047...17,868,423
Ensembl chrNW_004624744:17,837,609...17,868,431 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21764747) Ensembl
MGI		 PMID:21764747 GO_REF:0000107 NCBI chrNW_004624777:3,728,984...3,735,373
Ensembl chrNW_004624777:3,731,299...3,735,373 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21764747) Ensembl
MGI		 PMID:21764747 GO_REF:0000107 NCBI chrNW_004624751:20,091,612...20,096,581
Ensembl chrNW_004624751:20,091,609...20,096,563 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (PMID:25043473) MGI PMID:25043473 NCBI chrNW_004624878:621,214...776,363 JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9740653) MGI
Ensembl		 PMID:9740653 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:9731532) MGI PMID:9731532 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO (PMID:21956870) MGI PMID:21956870 NCBI chrNW_004624837:7,139,006...7,205,077
Ensembl chrNW_004624837:7,138,419...7,190,194 		JBrowse link
G Tnc tenascin C ISO RGD PMID:16928692 RGD:4889612 NCBI chrNW_004624760:20,044,900...20,137,260
Ensembl chrNW_004624760:20,044,826...20,137,616 		JBrowse link
club cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 acts_upstream_of_or_within ISO (PMID:17164424) MGI PMID:17164424 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Nfib nuclear factor I B involved_in ISO (MGI:5049839|PMID:21513708) UniProt PMID:21513708 MGI:5049839 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17164424) MGI PMID:17164424 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (PMID:22797898) MGI PMID:22797898 NCBI chrNW_004624755:6,176,497...6,298,034
Ensembl chrNW_004624755:6,176,497...6,298,225 		JBrowse link
diaphragm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase ISO RGD PMID:9618389 RGD:4139909 NCBI chrNW_004624740:8,414,664...8,423,797
Ensembl chrNW_004624740:8,414,733...8,423,777 		JBrowse link
G Ass1 argininosuccinate synthase 1 ISO RGD PMID:9618389 RGD:4139909 NCBI chrNW_004624760:5,180,095...5,221,677
Ensembl chrNW_004624760:5,180,095...5,221,732 		JBrowse link
G Disp1 dispatched RND transporter family member 1 involved_in ISO (PMID:20799323) UniProt PMID:20799323 NCBI chrNW_004624835:5,316,620...5,468,179
Ensembl chrNW_004624835:5,316,585...5,468,156 		JBrowse link
G Fgfrl1 fibroblast growth factor receptor like 1 acts_upstream_of_or_within ISO (PMID:17986259) MGI PMID:17986259 NCBI chrNW_004624755:26,134,957...26,145,746
Ensembl chrNW_004624755:26,135,505...26,144,325 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:27711214) MGI PMID:27711214 NCBI chrNW_004624832:6,849,001...6,858,931
Ensembl chrNW_004624832:6,849,005...6,857,898 		JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ISO RGD PMID:12652645 RGD:9743957 NCBI chrNW_004624730:33,701,386...34,141,269
Ensembl chrNW_004624730:33,876,381...34,139,594 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chrNW_004624800:1,426,773...1,431,510
Ensembl chrNW_004624800:1,426,998...1,431,631 		JBrowse link
G Msc musculin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:19,268,734...19,272,611
Ensembl chrNW_004624744:19,269,944...19,273,768 		JBrowse link
G Myt1 myelin transcription factor 1 acts_upstream_of_or_within ISO (PMID:17928203) MGI PMID:17928203 NCBI chrNW_004624741:29,779,177...29,837,606
Ensembl chrNW_004624741:29,775,504...29,837,606 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:304,890...413,655
Ensembl chrNW_004624781:389,481...413,728 		JBrowse link
G Tcf21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chrNW_004624766:20,899,546...20,937,084
Ensembl chrNW_004624766:20,900,676...20,937,202 		JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsh cathepsin H involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chrNW_004624941:82,209...98,156
Ensembl chrNW_004624941:82,209...98,182 		JBrowse link
epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of ISO (PMID:17428829) MGI PMID:17428829 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624828:5,489,085...5,511,166
Ensembl chrNW_004624828:5,488,814...5,511,445 		JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of ISO (PMID:19686689) MGI PMID:19686689 NCBI chrNW_004624827:2,045,733...2,088,284
Ensembl chrNW_004624827:2,045,595...2,089,442 		JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI
RGD		 PMID:8674409 PMID:8769111 RGD:2306315 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18231602)
(PMID:18533146)		 Ensembl
MGI		 PMID:18231602 PMID:18533146 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Ctsd cathepsin D NOT|involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chrNW_004624767:14,661,058...14,671,116
Ensembl chrNW_004624767:14,660,936...14,671,671 		JBrowse link
G Ctsz cathepsin Z involved_in ISO (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chrNW_004624741:25,280,916...25,301,724
Ensembl chrNW_004624741:25,280,916...25,301,800 		JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within ISO (PMID:11798066) MGI PMID:11798066 NCBI chrNW_004624730:3,417,356...3,488,300
Ensembl chrNW_004624730:3,417,347...3,488,879 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO (PMID:23466739) MGI PMID:23466739 NCBI chrNW_004624754:11,033,649...11,155,271
Ensembl chrNW_004624754:11,036,716...11,155,256 		JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO (PMID:26371508) MGI PMID:26371508 NCBI chrNW_004624763:1,998,560...2,073,854
Ensembl chrNW_004624763:1,998,579...2,073,950 		JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 acts_upstream_of_or_within ISO (PMID:26371508) MGI PMID:26371508 NCBI chrNW_004624746:18,075,755...18,090,011
Ensembl chrNW_004624746:18,075,742...18,085,572 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:28859094) MGI PMID:28859094 NCBI chrNW_004624763:16,126,582...16,393,476
Ensembl chrNW_004624763:16,126,938...16,392,804 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15800000)
(PMID:9784490)
(PMID:9916808)
(PMID:16169547), (PMID:16375885), (PMID:9428423)
(PMID:17560563)		 Ensembl
MGI		 PMID:9428423 PMID:9784490 PMID:9916808 PMID:15800000 PMID:16169547 More... GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:24058167) MGI PMID:24058167 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO (PMID:15668254) MGI PMID:15668254 NCBI chrNW_004624955:234,289...239,541
Ensembl chrNW_004624955:231,506...239,508 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:15668254) MGI PMID:15668254 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:11493558) MGI PMID:11493558 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Hhip hedgehog interacting protein acts_upstream_of_or_within ISO (PMID:12569124) MGI PMID:12569124 NCBI chrNW_004624853:3,649,974...3,739,344
Ensembl chrNW_004624853:3,649,967...3,735,834 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:24661562) MGI PMID:24661562 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990 		JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441679) Ensembl
MGI		 PMID:9441679 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Kras KRAS proto-oncogene, GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24058167) Ensembl
MGI		 PMID:24058167 GO_REF:0000107 NCBI chrNW_004624752:13,809,741...13,847,020
Ensembl chrNW_004624752:13,809,775...13,844,166 		JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO (PMID:11798066), (PMID:1907584) MGI PMID:1907584 PMID:11798066 NCBI chrNW_004624770:16,358,952...16,490,986
Ensembl chrNW_004624770:16,359,255...16,462,817 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO (PMID:8675988) UniProt PMID:8675988 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO (PMID:18256198) MGI PMID:18256198 NCBI chrNW_004624763:23,067,682...23,182,945
Ensembl chrNW_004624763:23,067,691...23,182,059 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10500184), (PMID:9731532) RGD
MGI		 PMID:8769111 PMID:9731532 PMID:10500184 RGD:2306315 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:18374910) MGI PMID:18374910 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24058167) MGI PMID:24058167 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:5805984|PMID:27720610) UniProt PMID:27720610 MGI:5805984 NCBI chrNW_004624871:2,428,757...2,437,447
Ensembl chrNW_004624871:2,429,407...2,437,447 		JBrowse link
G Tmem67 transmembrane protein 67 involved_in ISO (MGI:5648757|PMID:26035863) UniProt PMID:26035863 MGI:5648757 NCBI chrNW_004624763:1,219,779...1,281,297
Ensembl chrNW_004624763:1,219,827...1,264,071 		JBrowse link
larynx morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:28177282) MGI PMID:28177282 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:28177282) MGI PMID:28177282 NCBI chrNW_004624832:4,509,118...4,514,180
Ensembl chrNW_004624832:4,509,505...4,514,183 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:28177282) MGI PMID:28177282 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900 		JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (PMID:20223754) MGI PMID:20223754 NCBI chrNW_004624752:3,426,317...3,537,219
Ensembl chrNW_004624752:3,425,901...3,535,400 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:20223754) MGI PMID:20223754 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708 		JBrowse link
left lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10500184) MGI PMID:10500184 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
left lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chrNW_004624754:4,557,407...4,564,580
Ensembl chrNW_004624754:4,557,952...4,564,644 		JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:11493526) MGI PMID:11493526 NCBI chrNW_004624838:4,872,279...4,889,780
Ensembl chrNW_004624838:4,871,511...4,886,384 		JBrowse link
lobar bronchus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027 		JBrowse link
lobar bronchus epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamtsl2 ADAMTS like 2 acts_upstream_of_or_within ISO (PMID:25762570) MGI PMID:25762570 NCBI chrNW_004624760:1,948,302...1,977,459
Ensembl chrNW_004624760:1,949,907...1,976,894 		JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441679) Ensembl
MGI		 PMID:9441679 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
lung alveolus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 ISO (PMID:18632686)
(PMID:18957418)		 MGI PMID:18632686 PMID:18957418 NCBI chrNW_004624765:1,009,883...1,198,225
Ensembl chrNW_004624765:1,010,287...1,197,910 		JBrowse link
G Ace angiotensin I converting enzyme ISO RGD PMID:22587910 RGD:6893470 NCBI chrNW_004624849:998,262...1,019,305
Ensembl chrNW_004624849:998,277...1,019,521 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:10899903) MGI PMID:10899903 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:937819) MGI PMID:937819 NCBI chrNW_004624836:2,804,349...3,058,125
Ensembl chrNW_004624836:2,808,681...2,993,452 		JBrowse link
G Atxn1 ataxin 1 acts_upstream_of_or_within ISO (PMID:22014525) MGI PMID:22014525 NCBI chrNW_004624756:9,770,261...10,167,560
Ensembl chrNW_004624756:10,011,250...10,160,469 		JBrowse link
G Atxn1l ataxin 1 like acts_upstream_of_or_within ISO (PMID:22014525) MGI PMID:22014525 NCBI chrNW_004624746:14,119,413...14,130,622
Ensembl chrNW_004624746:14,119,440...14,130,429 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:16439805), (PMID:19381131) MGI PMID:16439805 PMID:19381131 NCBI chrNW_004624731:13,775,414...13,789,380
Ensembl chrNW_004624731:13,777,656...13,785,366 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (MGI:3799581|PMID:18552156) BHF-UCL PMID:18552156 MGI:3799581 NCBI chrNW_004624765:13,849,689...13,950,839
Ensembl chrNW_004624765:13,857,062...13,947,683 		JBrowse link
G Cic capicua transcriptional repressor acts_upstream_of_or_within ISO (PMID:22014525) MGI PMID:22014525 NCBI chrNW_004624907:458,447...486,482
Ensembl chrNW_004624907:454,948...486,565 		JBrowse link
G Cldn18 claudin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:14,500,379...14,522,047
Ensembl chrNW_004624730:14,489,585...14,522,042 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31837950) Ensembl
MGI		 PMID:31837950 GO_REF:0000107 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318 		JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:15928322 RGD:10398812 NCBI chrNW_004624733:12,616,537...12,631,967
Ensembl chrNW_004624733:12,616,423...12,632,133 		JBrowse link
G Edn2 endothelin 2 acts_upstream_of_or_within ISO (PMID:23676500) MGI PMID:23676500 NCBI chrNW_004624892:861,976...879,044
Ensembl chrNW_004624892:870,259...877,387 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in ISO (MGI:4366137|PMID:19710174) UniProt PMID:19710174 MGI:4366137 NCBI chrNW_004624818:3,868,089...3,882,960
Ensembl chrNW_004624818:3,868,814...3,882,960 		JBrowse link
G Fbn1 fibrillin 1 acts_upstream_of_or_within ISO (PMID:16439805) MGI PMID:16439805 NCBI chrNW_004624731:11,086,240...11,318,111
Ensembl chrNW_004624731:11,086,844...11,318,102 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16989802)
(PMID:17560563)		 Ensembl
MGI		 PMID:16989802 PMID:17560563 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16989802) MGI PMID:16989802 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
G Flt4 fms related receptor tyrosine kinase 4 acts_upstream_of_or_within ISO (PMID:24733830) MGI PMID:24733830 NCBI chrNW_004624733:43,203,311...43,238,664
Ensembl chrNW_004624733:43,204,651...43,238,674 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:28818870) MGI PMID:28818870 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:11493558) MGI PMID:11493558 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:17428829) MGI PMID:17428829 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488 		JBrowse link
G Fzd1 frizzled class receptor 1 ISO RGD PMID:17911382 RGD:2304247 NCBI chrNW_004624809:2,021,118...2,025,826
Ensembl chrNW_004624809:2,021,124...2,025,589 		JBrowse link
G Hopx HOP homeobox acts_upstream_of_or_within ISO (PMID:16510470) MGI PMID:16510470 NCBI chrNW_004624761:12,776,215...12,806,879
Ensembl chrNW_004624761:12,776,137...12,807,042 		JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15295088), (PMID:17003488) Ensembl
MGI		 PMID:15295088 PMID:17003488 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within ISO (PMID:17405882) MGI PMID:17405882 NCBI chrNW_004624732:17,210,315...17,249,930
Ensembl chrNW_004624732:17,209,984...17,250,358 		JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Igfbp5 insulin like growth factor binding protein 5 involved_in ISO (MGI:3039207|PMID:15010534) BHF-UCL PMID:15010534 MGI:3039207 NCBI chrNW_004624823:8,434,614...8,454,879
Ensembl chrNW_004624823:8,434,635...8,454,747 		JBrowse link
G Itgb6 integrin subunit beta 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12634787) Ensembl
MGI		 PMID:12634787 GO_REF:0000107 NCBI chrNW_004624732:5,348,589...5,499,826
Ensembl chrNW_004624732:5,403,956...5,499,855 		JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within ISO (PMID:12053176) MGI PMID:12053176 NCBI chrNW_004624761:14,330,224...14,380,680
Ensembl chrNW_004624761:14,330,489...14,379,051 		JBrowse link
G Lif LIF interleukin 6 family cytokine acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624747:6,558,872...6,565,207
Ensembl chrNW_004624747:6,558,817...6,565,281 		JBrowse link
G Man1a2 mannosidase alpha class 1A member 2 acts_upstream_of_or_within ISO (PMID:17121831) MGI PMID:17121831 NCBI chrNW_004624772:13,103,698...13,253,215
Ensembl chrNW_004624772:13,103,855...13,253,408 		JBrowse link
G Man2a1 mannosidase alpha class 2A member 1 acts_upstream_of_or_within ISO (PMID:16754854) MGI PMID:16754854 NCBI chrNW_004624743:27,607,094...27,791,612 JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within ISO (PMID:18324732) MGI PMID:18324732 NCBI chrNW_004624913:481,236...529,083
Ensembl chrNW_004624913:481,207...529,070 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:21425435 RGD:8552971 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12634787) Ensembl
MGI		 PMID:12634787 GO_REF:0000107 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445 		JBrowse link
G Myocd myocardin acts_upstream_of_or_within ISO (PMID:21357509) MGI PMID:21357509 NCBI chrNW_004624877:618,789...647,471 JBrowse link
G Nkiras1 NFKB inhibitor interacting Ras like 1 acts_upstream_of_or_within ISO (PMID:25220458) MGI PMID:25220458 NCBI chrNW_004624788:1,590,441...1,639,059
Ensembl chrNW_004624788:1,608,247...1,639,083 		JBrowse link
G Nkiras2 NFKB inhibitor interacting Ras like 2 acts_upstream_of_or_within ISO (PMID:25220458) MGI PMID:25220458 NCBI chrNW_004624795:1,828,046...1,830,880
Ensembl chrNW_004624795:1,828,046...1,830,483 		JBrowse link
G Pdgfa platelet derived growth factor subunit A involved_in
acts_upstream_of_or_within		 ISO (MGI:1098909|PMID:9374392)
(PMID:23938297)
(PMID:11803579)		 UniProt
MGI		 PMID:9374392 PMID:11803579 PMID:23938297 MGI:1098909 NCBI chrNW_004624740:26,172,808...26,191,557
Ensembl chrNW_004624740:26,169,064...26,188,866 		JBrowse link
G Pdpn podoplanin acts_upstream_of_or_within ISO (PMID:16869965) MGI PMID:16869965 NCBI chrNW_004624764:163,370...192,770 JBrowse link
G Pgr progesterone receptor acts_upstream_of_or_within ISO (PMID:24190884) MGI PMID:24190884 NCBI chrNW_004624878:1,714,196...1,769,302
Ensembl chrNW_004624878:1,714,559...1,762,421 		JBrowse link
G Phf14 PHD finger protein 14 acts_upstream_of_or_within ISO (PMID:22730381) MGI PMID:22730381 NCBI chrNW_004624827:8,122,179...8,337,721
Ensembl chrNW_004624827:8,122,307...8,366,113 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in ISO (MGI:4438146|PMID:19465597) UniProt PMID:19465597 MGI:4438146 NCBI chrNW_004624738:23,759,382...23,768,743
Ensembl chrNW_004624738:23,759,398...23,771,639 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:10518543) MGI PMID:10518543 NCBI chrNW_004624771:17,183,538...17,205,460
Ensembl chrNW_004624771:17,183,447...17,224,188 		JBrowse link
G Pthlh parathyroid hormone like hormone acts_upstream_of_or_within ISO (PMID:15162506) MGI PMID:15162506 NCBI chrNW_004624778:8,007,358...8,019,538
Ensembl chrNW_004624778:8,008,056...8,019,612 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23583643) Ensembl
MGI		 PMID:23583643 GO_REF:0000107 NCBI chrNW_004624760:12,025,206...12,074,548 JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO (PMID:23325319) MGI PMID:23325319 NCBI chrNW_004624764:9,892,161...9,905,984
Ensembl chrNW_004624764:9,892,176...9,903,990 		JBrowse link
G Sftpd surfactant protein D involved_in ISO (PMID:9751757) UniProt PMID:9751757 NCBI chrNW_004624841:6,917,067...6,938,594
Ensembl chrNW_004624841:6,916,849...6,936,077 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:23085521) MGI PMID:23085521 NCBI chrNW_004624777:18,540,006...18,619,881
Ensembl chrNW_004624777:18,546,799...18,619,947 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22945695) Ensembl
MGI		 PMID:22945695 GO_REF:0000107 NCBI chrNW_004624746:17,857,779...17,948,469
Ensembl chrNW_004624746:17,920,835...17,948,468 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:18374910) MGI PMID:18374910 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871 		JBrowse link
G Stk40 serine/threonine kinase 40 acts_upstream_of_or_within ISO (PMID:23293024) MGI PMID:23293024 NCBI chrNW_004624764:19,255,300...19,298,956
Ensembl chrNW_004624764:19,255,300...19,287,162 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:304,890...413,655
Ensembl chrNW_004624781:389,481...413,728 		JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10572052) Ensembl
MGI		 PMID:10572052 GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12634787) Ensembl
MGI		 PMID:12634787 GO_REF:0000107 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605 		JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO (MGI:77427|PMID:7493022) BHF-UCL PMID:7493022 MGI:77427 NCBI chrNW_004624734:25,717,011...25,739,942
Ensembl chrNW_004624734:25,716,972...25,739,199 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (PMID:19515693) MGI PMID:19515693 NCBI chrNW_004624758:5,664,287...5,720,061
Ensembl chrNW_004624758:5,662,661...5,719,865 		JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO (PMID:21956870) MGI PMID:21956870 NCBI chrNW_004624837:7,139,006...7,205,077
Ensembl chrNW_004624837:7,138,419...7,190,194 		JBrowse link
G Tns3 tensin 3 acts_upstream_of_or_within ISO (PMID:15733665) MGI PMID:15733665 NCBI chrNW_004624740:5,776,883...5,928,434
Ensembl chrNW_004624740:5,824,510...5,930,478 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:16230500 RGD:1580552 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
G Wnt5a Wnt family member 5A ISO RGD PMID:17911382 RGD:2304247 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Znf157 zinc finger protein 157 acts_upstream_of_or_within ISO (PMID:22588720) MGI PMID:22588720 NCBI chrNW_004624887:4,117,433...4,149,442
Ensembl chrNW_004624887:4,117,635...4,149,416 		JBrowse link
lung cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19805295) Ensembl
MGI		 PMID:19805295 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
lung ciliated cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfib nuclear factor I B involved_in ISO (MGI:5049839|PMID:21513708) UniProt PMID:21513708 MGI:5049839 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424 		JBrowse link
lung connective tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:31135379) MGI PMID:31135379 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Rxfp1 relaxin family peptide receptor 1 acts_upstream_of_or_within ISO (PMID:15256493) MGI PMID:15256493 NCBI chrNW_004624848:10,648...115,474
Ensembl chrNW_004624848:10,918...115,310 		JBrowse link
lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP binding cassette subfamily A member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:85,369...144,053
Ensembl chrNW_004624824:84,430...144,062 		JBrowse link
G Ace angiotensin I converting enzyme ISO RGD PMID:7977726 RGD:8158036 NCBI chrNW_004624849:998,262...1,019,305
Ensembl chrNW_004624849:998,277...1,019,521 		JBrowse link
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:17849440) MGI PMID:17849440 NCBI chrNW_004624731:2,557,993...2,600,250
Ensembl chrNW_004624731:2,566,063...2,600,035 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7670465) MGI PMID:7670465 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883 		JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 acts_upstream_of_or_within ISO (PMID:16556917) MGI PMID:16556917 NCBI chrNW_004624733:42,070,069...42,264,882
Ensembl chrNW_004624733:42,070,087...42,264,849 		JBrowse link
G Ager advanced glycosylation end-product specific receptor ISO RGD PMID:17343756 RGD:1625339 NCBI chrNW_004624754:24,138,086...24,140,900 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (PMID:16427040), (PMID:16806149) MGI PMID:16427040 PMID:16806149 NCBI chrNW_004624781:13,756,469...13,845,253
Ensembl chrNW_004624781:13,756,390...13,845,479 		JBrowse link
G Anxa2 annexin A2 acts_upstream_of_or_within ISO (PMID:24357721) MGI PMID:24357721 NCBI chrNW_004624781:11,781,893...11,820,440
Ensembl chrNW_004624781:11,781,886...11,821,816 		JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO (PMID:12777251) MGI PMID:12777251 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328 		JBrowse link
G Arg1 arginase 1 ISO RGD PMID:18192591 RGD:4143284 NCBI chrNW_004624753:5,737,720...5,749,313
Ensembl chrNW_004624753:5,737,237...5,752,966 		JBrowse link
G Arg2 arginase 2 ISO RGD PMID:18192591 RGD:4143284 NCBI chrNW_004624734:33,321,161...33,352,306
Ensembl chrNW_004624734:33,321,295...33,352,277 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 ISO RGD PMID:9160843 RGD:1599262 NCBI chrNW_004624769:21,112,705...21,140,004
Ensembl chrNW_004624769:21,112,851...21,138,831 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chrNW_004624754:24,559,483...24,571,073
Ensembl chrNW_004624754:24,559,801...24,571,073 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:16439805) MGI PMID:16439805 NCBI chrNW_004624731:13,775,414...13,789,380
Ensembl chrNW_004624731:13,777,656...13,785,366 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:16414041) MGI PMID:16414041 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (PMID:16414041) MGI PMID:16414041 NCBI chrNW_004624841:218,642...304,744
Ensembl chrNW_004624841:219,133...265,397 		JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 acts_upstream_of_or_within ISO (PMID:24733830) MGI PMID:24733830 NCBI chrNW_004624792:4,863,978...5,146,907
Ensembl chrNW_004624792:4,867,858...5,146,839 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO (PMID:22693285) BHF-UCL PMID:22693285 NCBI chrNW_004624730:58,436,427...58,471,926
Ensembl chrNW_004624730:58,436,469...58,471,799 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO (MGI:4936771|PMID:21131974)
(PMID:22693285)		 BHF-UCL PMID:21131974 PMID:22693285 MGI:4936771 NCBI chrNW_004624801:9,160,852...9,217,033
Ensembl chrNW_004624801:9,160,805...9,217,756 		JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO (PMID:18213577) RGD
MGI		 PMID:18213577 PMID:19361631 RGD:2314526 NCBI chrNW_004624753:6,022,033...6,024,866
Ensembl chrNW_004624753:6,023,069...6,024,833 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha involved_in
acts_upstream_of_or_within		 ISO (MGI:83240|PMID:8798745)
(PMID:16467360)		 UniProt
MGI		 PMID:8798745 PMID:16467360 MGI:83240 NCBI chrNW_004624794:9,809,007...9,813,418 JBrowse link
G Cftr CF transmembrane conductance regulator ISO RGD PMID:15694001 RGD:1599597 NCBI chrNW_004624827:1,704,733...1,893,579 JBrowse link
G Chi3l1 chitinase 3 like 1 involved_in ISO (PMID:18403759) UniProt PMID:18403759 NCBI chrNW_004624807:7,655,777...7,664,484
Ensembl chrNW_004624807:7,655,620...7,662,362 		JBrowse link
G Clcn2 chloride voltage-gated channel 2 ISO RGD PMID:14711803 RGD:1358647 NCBI chrNW_004624730:72,228,912...72,242,636
Ensembl chrNW_004624730:72,228,189...72,244,332 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:17960558) MGI PMID:17960558 NCBI chrNW_004624899:1,192,078...1,230,528
Ensembl chrNW_004624899:1,192,360...1,230,404 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24357721) Ensembl
MGI		 PMID:24357721 GO_REF:0000107 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318 		JBrowse link
G Cp ceruloplasmin ISO RGD PMID:2332446 RGD:728241 NCBI chrNW_004624730:26,458,554...26,510,796
Ensembl chrNW_004624730:26,462,550...26,511,078 		JBrowse link
G Crh corticotropin releasing hormone acts_upstream_of_or_within ISO (PMID:10861000) MGI PMID:10861000 NCBI chrNW_004624744:25,194,458...25,196,658
Ensembl chrNW_004624744:25,194,495...25,196,488 		JBrowse link
G Crispld2 cysteine rich secretory protein LCCL domain containing 2 ISO RGD PMID:10362728 RGD:633294 NCBI chrNW_004624746:1,648,753...1,691,722
Ensembl chrNW_004624746:1,648,685...1,691,849 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18231602)
(PMID:12885771)		 Ensembl
MGI		 PMID:12885771 PMID:18231602 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Cux1 cut like homeobox 1 acts_upstream_of_or_within ISO (PMID:11544187) MGI PMID:11544187 NCBI chrNW_004624740:15,289,616...15,664,090
Ensembl chrNW_004624740:15,287,421...15,664,077 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase acts_upstream_of_or_within ISO (PMID:15005800) MGI PMID:15005800 NCBI chrNW_004624767:16,118,157...16,132,225
Ensembl chrNW_004624767:16,118,052...16,132,834 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:16452165) MGI PMID:16452165 NCBI chrNW_004624734:7,604,049...7,681,481
Ensembl chrNW_004624734:7,608,273...7,651,819 		JBrowse link
G Dnaaf1 dynein axonemal assembly factor 1 involved_in ISO (PMID:19944405) BHF-UCL PMID:19944405 NCBI chrNW_004624746:3,412,888...3,441,710 JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:20118217 RGD:5131869 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271 		JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ISO RGD PMID:18952566 RGD:2307417 NCBI chrNW_004624780:5,543,117...5,561,285
Ensembl chrNW_004624780:5,543,117...5,561,261 		JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 ISO RGD PMID:15388509 RGD:2307418 NCBI chrNW_004624730:72,251,840...72,271,724 JBrowse link
G Elk1 ETS transcription factor ELK1 acts_upstream_of_or_within ISO (PMID:31877385) MGI PMID:31877385 NCBI chrNW_004624978:194,985...208,105
Ensembl chrNW_004624978:194,992...208,103 		JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12053176) Ensembl
MGI		 PMID:12053176 GO_REF:0000107 NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054 		JBrowse link
G Fbn1 fibrillin 1 acts_upstream_of_or_within ISO (PMID:16439805) MGI PMID:16439805 NCBI chrNW_004624731:11,086,240...11,318,111
Ensembl chrNW_004624731:11,086,844...11,318,102 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 acts_upstream_of_or_within ISO (PMID:21503901) MGI PMID:21503901 NCBI chrNW_004624858:3,778,842...3,974,351
Ensembl chrNW_004624858:3,775,795...3,873,336 		JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15576401) Ensembl
TreeGrafter
MGI		 PMID:15576401 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624774:1,779,168...1,867,321
Ensembl chrNW_004624774:1,779,170...1,867,300 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9916808)
(PMID:17560563)
(PMID:16375885), (PMID:9428423)		 Ensembl
MGI		 PMID:9428423 PMID:9916808 PMID:16375885 PMID:17560563 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15336546) Ensembl
MGI		 PMID:15336546 GO_REF:0000107 NCBI chrNW_004624733:18,599,186...18,633,065
Ensembl chrNW_004624733:18,599,557...18,633,016 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:15576401)
(PMID:17187775)		 MGI PMID:15576401 PMID:17187775 NCBI chrNW_004624777:3,268,674...3,321,424
Ensembl chrNW_004624777:3,268,953...3,321,145 		JBrowse link
G Fgf7 fibroblast growth factor 7 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11316745 GO_REF:0000118 RGD:68696 NCBI chrNW_004624731:10,413,715...10,468,660
Ensembl chrNW_004624731:10,413,645...10,468,690 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:10411502) MGI PMID:10411502 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741 		JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16540513)
(PMID:11493531)		 Ensembl
TreeGrafter
MGI		 PMID:11493531 PMID:16540513 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624776:16,022,118...16,055,413
Ensembl chrNW_004624776:16,019,835...16,055,498 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:15576401)
(PMID:16540513)		 MGI PMID:15576401 PMID:16540513 NCBI chrNW_004624780:5,161,245...5,212,641
Ensembl chrNW_004624780:5,161,073...5,213,870 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16540513)
(PMID:10518547)		 MGI PMID:10518547 PMID:16540513 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (PMID:15576401) MGI PMID:15576401 NCBI chrNW_004624733:12,964,893...12,979,198
Ensembl chrNW_004624733:12,964,746...12,976,732 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:30181393) MGI PMID:30181393 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO (PMID:15668254) MGI PMID:15668254 NCBI chrNW_004624955:234,289...239,541
Ensembl chrNW_004624955:231,506...239,508 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:15668254) MGI PMID:15668254 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854 		JBrowse link
G Foxf1 forkhead box F1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19500772)
(PMID:11493558)
(PMID:11437453)		 DFLAT
MGI		 PMID:11437453 PMID:11493558 PMID:19500772 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:17428829) MGI PMID:17428829 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:17428829) MGI PMID:17428829 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488 		JBrowse link
G Fstl3 follistatin like 3 ISO RGD PMID:14692692 RGD:1302294 NCBI chrNW_004624828:7,842,903...7,848,181
Ensembl chrNW_004624828:7,843,906...7,848,134 		JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (PMID:10725236) MGI PMID:10725236 NCBI chrNW_004624802:10,483,279...10,494,539
Ensembl chrNW_004624802:10,483,219...10,498,609 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:10725236)
(PMID:9731531)		 MGI PMID:9731531 PMID:10725236 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (PMID:15136151)
(PMID:9268579)		 MGI PMID:9268579 PMID:15136151 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900 		JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10402475) Ensembl
MGI		 PMID:10402475 GO_REF:0000107 NCBI chrNW_004624797:13,234,741...13,678,542
Ensembl chrNW_004624797:13,230,932...13,678,742 		JBrowse link
G Heg1 heart development protein with EGF like domains 1 acts_upstream_of_or_within ISO (PMID:19151727) MGI PMID:19151727 NCBI chrNW_004624731:1,015,889...1,092,875
Ensembl chrNW_004624731:1,020,805...1,092,995 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:10952889) MGI PMID:10952889 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781 		JBrowse link
G Hikeshi heat shock protein nuclear import factor hikeshi acts_upstream_of_or_within ISO (PMID:16157679) MGI PMID:16157679 NCBI chrNW_004624845:3,650,180...3,676,805
Ensembl chrNW_004624845:3,647,783...3,676,814 		JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within ISO (PMID:10391216) MGI PMID:10391216 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:7911291 RGD:2326221 NCBI chrNW_004624772:15,432,612...15,464,343
Ensembl chrNW_004624772:15,432,198...15,467,797 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:9457472 RGD:10045983 NCBI chrNW_004624904:2,314,197...2,320,900
Ensembl chrNW_004624904:2,314,249...2,318,791 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:9761751 RGD:9685418 NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17417799) Ensembl
MGI		 PMID:17417799 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Hps1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (PMID:12777251) MGI PMID:12777251 NCBI chrNW_004624737:10,008,807...10,042,928
Ensembl chrNW_004624737:10,007,777...10,041,100 		JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 acts_upstream_of_or_within ISO (PMID:12439781) MGI PMID:12439781 NCBI chrNW_004624807:2,260,702...2,293,962
Ensembl chrNW_004624807:2,261,006...2,293,804 		JBrowse link
G Ift25 intraflagellar transport 25 acts_upstream_of_or_within ISO (PMID:22595669) MGI PMID:22595669 NCBI chrNW_004624934:533,112...567,896
Ensembl chrNW_004624934:543,847...568,122 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983) MGI PMID:19036983 NCBI chrNW_004624776:16,954,368...17,086,377
Ensembl chrNW_004624776:16,954,507...17,086,337 		JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Il18 interleukin 18 ISO RGD PMID:18952566 RGD:2307417 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687 		JBrowse link
G Itga3 integrin subunit alpha 3 involved_in ISO (PMID:24621570) UniProt PMID:24621570 NCBI chrNW_004624795:6,062,438...6,092,556
Ensembl chrNW_004624795:6,062,290...6,092,557 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase acts_upstream_of_or_within ISO (PMID:14645847)
(PMID:15345036)		 MGI PMID:14645847 PMID:15345036 NCBI chrNW_004624801:6,560,746...6,571,190
Ensembl chrNW_004624801:6,563,756...6,571,196 		JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within ISO (PMID:16375885) MGI PMID:16375885 NCBI chrNW_004624761:14,330,224...14,380,680
Ensembl chrNW_004624761:14,330,489...14,379,051 		JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (PMID:12051813) MGI PMID:12051813 NCBI chrNW_004624741:28,156,956...28,217,133
Ensembl chrNW_004624741:28,157,172...28,217,113 		JBrowse link
G Lhx3 LIM homeobox 3 ISO RGD PMID:16798779 RGD:1600300 NCBI chrNW_004624760:1,428,496...1,435,414
Ensembl chrNW_004624760:1,429,384...1,435,414 		JBrowse link
G Lif LIF interleukin 6 family cytokine acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624747:6,558,872...6,565,207
Ensembl chrNW_004624747:6,558,817...6,565,281 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:14644759) MGI PMID:14644759 NCBI chrNW_004624737:49,471...82,981
Ensembl chrNW_004624737:49,371...83,514 		JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO (PMID:16192629) MGI PMID:16192629 NCBI chrNW_004624774:20,116,625...20,137,767
Ensembl chrNW_004624774:20,116,970...20,134,355 		JBrowse link
G Loxl3 lysyl oxidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:28,959,682...28,980,428
Ensembl chrNW_004624749:28,960,593...28,980,428 		JBrowse link
G Mgp matrix Gla protein ISO RGD PMID:15136295 RGD:1582506 NCBI chrNW_004624752:23,146,025...23,149,266
Ensembl chrNW_004624752:23,146,166...23,149,048 		JBrowse link
G Mme membrane metalloendopeptidase ISO RGD PMID:1547865 RGD:13801036 NCBI chrNW_004624730:32,601,835...32,691,368
Ensembl chrNW_004624730:32,601,488...32,689,080 		JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO (PMID:15572153) MGI PMID:15572153 NCBI chrNW_004624820:9,667,371...9,677,488
Ensembl chrNW_004624820:9,667,262...9,677,774 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) MGI PMID:34486668 NCBI chrNW_004624782:7,455,770...7,513,931 JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:15716345) MGI PMID:15716345 NCBI chrNW_004624865:780,163...785,776 JBrowse link
G Nfib nuclear factor I B acts_upstream_of_or_within ISO (PMID:11850179)
(PMID:15632069)		 MGI PMID:11850179 PMID:15632069 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:15494458), (PMID:16960125)
(PMID:10706142)
(PMID:12829717)
(PMID:21350014)		 UniProt
MGI		 PMID:10706142 PMID:12829717 PMID:15494458 PMID:16960125 PMID:21350014 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517 		JBrowse link
G Nkx2-8 NK2 homeobox 8 acts_upstream_of_or_within ISO (PMID:17079460) MGI PMID:17079460 NCBI chrNW_004624838:227,941...234,431
Ensembl chrNW_004624838:228,153...229,728 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chrNW_004624754:4,557,407...4,564,580
Ensembl chrNW_004624754:4,557,952...4,564,644 		JBrowse link
G Nos3 nitric oxide synthase 3 acts_upstream_of_or_within ISO (PMID:15016731) MGI PMID:15016731 NCBI chrNW_004624800:5,600,215...5,619,020
Ensembl chrNW_004624800:5,600,212...5,619,004 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:15064243) MGI PMID:15064243 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16371448 RGD:4892096 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632 		JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 acts_upstream_of_or_within ISO (PMID:27486780) MGI PMID:27486780 NCBI chrNW_004624795:1,861,985...1,876,766
Ensembl chrNW_004624795:1,861,991...1,876,737 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11803579) Ensembl
MGI		 PMID:11803579 GO_REF:0000107 NCBI chrNW_004624761:15,223,789...15,269,685
Ensembl chrNW_004624761:15,225,356...15,269,810 		JBrowse link
G Pdpn podoplanin acts_upstream_of_or_within ISO (PMID:12654292) RGD
MGI		 PMID:8652186 PMID:12654292 RGD:2292371 NCBI chrNW_004624764:163,370...192,770 JBrowse link
G Phex phosphate regulating endopeptidase X-linked ISO RGD PMID:11064151 RGD:11556272 NCBI chrNW_004624829:6,960,740...7,151,752
Ensembl chrNW_004624829:6,960,904...7,151,752 		JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:10499586)
(PMID:10498698)
(PMID:18231602)
(PMID:10572050)		 MGI PMID:10498698 PMID:10499586 PMID:10572050 PMID:18231602 NCBI chrNW_004624838:4,872,279...4,889,780
Ensembl chrNW_004624838:4,871,511...4,886,384 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15042703) Ensembl
MGI		 PMID:15042703 GO_REF:0000107 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) BHF-UCL PMID:8812486 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:2270483 RGD:9831441 NCBI chrNW_004624765:17,523,086...17,625,264
Ensembl chrNW_004624765:17,522,916...17,548,184 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:11359932) MGI PMID:11359932 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) BHF-UCL PMID:15994349 MGI:3604178 NCBI chrNW_004624737:4,795,054...4,800,830
Ensembl chrNW_004624737:4,791,628...4,800,989 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog ISO RGD PMID:12798936 RGD:9685563 NCBI chrNW_004624763:5,249,905...5,263,994
Ensembl chrNW_004624763:5,247,715...5,263,880 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:15136151)
(PMID:15136151), (PMID:17187775), (PMID:9731532)
(PMID:15305287)
(PMID:9768363)		 MGI PMID:9731532 PMID:9768363 PMID:15136151 PMID:15305287 PMID:17187775 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Sim2 SIM bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:12024028) MGI PMID:12024028 NCBI chrNW_004624745:26,851,423...26,891,590
Ensembl chrNW_004624745:26,852,980...26,891,176 		JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:32,169,051...32,186,618
Ensembl chrNW_004624743:32,174,922...32,186,697 		JBrowse link
G Smad2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17849440) Ensembl
MGI		 PMID:17849440 GO_REF:0000107 NCBI chrNW_004624778:11,380,656...11,460,566
Ensembl chrNW_004624778:11,384,769...11,501,078 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22945695) Ensembl
MGI		 PMID:22945695 GO_REF:0000107 NCBI chrNW_004624746:17,857,779...17,948,469
Ensembl chrNW_004624746:17,920,835...17,948,468 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chrNW_004624904:1,475,664...1,507,588 JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chrNW_004624787:11,144,581...11,193,520 JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO RGD PMID:7654384 RGD:2300073 NCBI chrNW_004624733:37,348,993...37,369,804
Ensembl chrNW_004624733:37,338,284...37,369,804 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10074434) Ensembl
MGI		 PMID:10074434 GO_REF:0000107 NCBI chrNW_004624751:20,091,612...20,096,581
Ensembl chrNW_004624751:20,091,609...20,096,563 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO RGD PMID:12896875 RGD:1304415 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465 		JBrowse link
G Stk40 serine/threonine kinase 40 acts_upstream_of_or_within ISO (PMID:23293024) MGI PMID:23293024 NCBI chrNW_004624764:19,255,300...19,298,956
Ensembl chrNW_004624764:19,255,300...19,287,162 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:304,890...413,655
Ensembl chrNW_004624781:389,481...413,728 		JBrowse link
G Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 acts_upstream_of_or_within ISO (PMID:12464436) MGI PMID:12464436 NCBI chrNW_004624752:8,912,467...8,937,313
Ensembl chrNW_004624752:8,913,900...8,937,329 		JBrowse link
G Tbx4 T-box transcription factor 4 acts_upstream_of_or_within ISO (PMID:12508227) MGI PMID:12508227 NCBI chrNW_004624871:2,365,836...2,390,269
Ensembl chrNW_004624871:2,366,823...2,390,269 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12508227) Ensembl
MGI		 PMID:12508227 GO_REF:0000107 NCBI chrNW_004624747:18,307,294...18,348,040
Ensembl chrNW_004624747:18,307,294...18,348,040 		JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 ISO RGD PMID:10835329 RGD:2302034 NCBI chrNW_004624825:1,773,158...1,899,120
Ensembl chrNW_004624825:1,839,178...1,899,156 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:18990706) RGD
MGI		 PMID:7573476 PMID:18990706 RGD:1601625 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
G Thra thyroid hormone receptor alpha ISO RGD PMID:17496154 RGD:2314319 NCBI chrNW_004624795:3,109,663...3,132,494
Ensembl chrNW_004624795:3,108,854...3,132,464 		JBrowse link
G Timeless timeless circadian regulator acts_upstream_of_or_within ISO (PMID:12950082) MGI PMID:12950082 NCBI chrNW_004624802:11,605,116...11,629,911 JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 ISO RGD PMID:10198159 RGD:2291962 NCBI chrNW_004624816:2,519,839...2,540,766 JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO (PMID:21956870) MGI PMID:21956870 NCBI chrNW_004624837:7,139,006...7,205,077
Ensembl chrNW_004624837:7,138,419...7,190,194 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chrNW_004624794:6,279,964...6,351,026
Ensembl chrNW_004624794:6,280,513...6,350,727 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (PMID:15927453)
(PMID:12053176)		 MGI PMID:12053176 PMID:15927453 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
G Wnt2 Wnt family member 2 ISO RGD PMID:1377452 RGD:2314905 NCBI chrNW_004624827:2,045,733...2,088,284
Ensembl chrNW_004624827:2,045,595...2,089,442 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (PMID:12142021) MGI PMID:12142021 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:18343501) MGI PMID:18343501 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027 		JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta involved_in ISO (PMID:29118970) MGI PMID:29118970 NCBI chrNW_004624763:7,722,275...7,723,482 JBrowse link
G Zfpm2 zinc finger protein, FOG family member 2 acts_upstream_of_or_within ISO (PMID:16103912) MGI PMID:16103912 NCBI chrNW_004624763:21,388,060...21,708,969
Ensembl chrNW_004624763:21,388,244...21,707,953 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) BHF-UCL PMID:9354794 NCBI chrNW_004624808:9,201,025...9,212,192
Ensembl chrNW_004624808:9,200,952...9,212,093 		JBrowse link
lung epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col6a1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31837950) Ensembl
MGI		 PMID:31837950 GO_REF:0000107 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16040629) Ensembl
MGI		 PMID:16040629 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase acts_upstream_of_or_within ISO (PMID:15005800) MGI PMID:15005800 NCBI chrNW_004624767:16,118,157...16,132,225
Ensembl chrNW_004624767:16,118,052...16,132,834 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO (PMID:21385765) MGI PMID:21385765 NCBI chrNW_004624744:19,782,174...19,975,496
Ensembl chrNW_004624744:19,782,790...19,977,335 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO (PMID:15668254) MGI PMID:15668254 NCBI chrNW_004624955:234,289...239,541
Ensembl chrNW_004624955:231,506...239,508 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:15668254) MGI PMID:15668254 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854 		JBrowse link
G Gpsm2 G protein signaling modulator 2 acts_upstream_of_or_within ISO (PMID:21385765) MGI PMID:21385765 NCBI chrNW_004624772:4,634,005...4,704,280
Ensembl chrNW_004624772:4,651,326...4,704,280 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in ISO (MGI:5613464|PMID:22955271) UniProt PMID:22955271 MGI:5613464 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358 		JBrowse link
G Insc INSC spindle orientation adaptor protein acts_upstream_of_or_within ISO (PMID:21385765) MGI PMID:21385765 NCBI chrNW_004624766:6,935,814...7,016,335
Ensembl chrNW_004624766:6,884,824...7,016,392 		JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 acts_upstream_of_or_within ISO (PMID:21385765) MGI PMID:21385765 NCBI chrNW_004624817:4,896,066...4,963,440
Ensembl chrNW_004624817:4,924,827...4,963,436 		JBrowse link
G Numb NUMB endocytic adaptor protein acts_upstream_of_or_within ISO (PMID:21385765) MGI PMID:21385765 NCBI chrNW_004624734:27,994,662...28,144,719 JBrowse link
G Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha acts_upstream_of_or_within ISO (PMID:16998587) MGI PMID:16998587 NCBI chrNW_004624762:5,087,726...5,156,526
Ensembl chrNW_004624762:5,087,705...5,156,922 		JBrowse link
G Pthlh parathyroid hormone like hormone acts_upstream_of_or_within ISO (PMID:15162506) MGI PMID:15162506 NCBI chrNW_004624778:8,007,358...8,019,538
Ensembl chrNW_004624778:8,008,056...8,019,612 		JBrowse link
G Sav1 salvador family WW domain containing protein 1 acts_upstream_of_or_within ISO (PMID:18369314) MGI PMID:18369314 NCBI chrNW_004624731:18,262,110...18,282,386 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24191021) MGI PMID:24191021 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (PMID:19515693) MGI PMID:19515693 NCBI chrNW_004624758:5,664,287...5,720,061
Ensembl chrNW_004624758:5,662,661...5,719,865 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (PMID:25043473) MGI PMID:25043473 NCBI chrNW_004624878:621,214...776,363 JBrowse link
lung epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (PMID:21408140) MGI PMID:21408140 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in ISO (MGI:4366137|PMID:19710174) UniProt PMID:19710174 MGI:4366137 NCBI chrNW_004624818:3,868,089...3,882,960
Ensembl chrNW_004624818:3,868,814...3,882,960 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9740653) MGI
Ensembl		 PMID:9740653 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:24661562) MGI PMID:24661562 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chrNW_004624913:118,520...166,939
Ensembl chrNW_004624913:118,733...165,859 		JBrowse link
G Rcn3 reticulocalbin 3 involved_in ISO (MGI:6201885|PMID:26252542) UniProt PMID:26252542 MGI:6201885 NCBI chrNW_004624832:4,699,294...4,709,188
Ensembl chrNW_004624832:4,699,299...4,709,150 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:9731532) MGI PMID:9731532 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027 		JBrowse link
lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agr2 anterior gradient 2, protein disulphide isomerase family member acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chrNW_004624739:13,428,049...13,440,949
Ensembl chrNW_004624739:13,428,130...13,442,070 		JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17003488) Ensembl
MGI		 PMID:17003488 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Spdef SAM pointed domain containing ETS transcription factor acts_upstream_of_or_within ISO (PMID:17347682) MGI PMID:17347682 NCBI chrNW_004624754:22,714,181...22,721,113
Ensembl chrNW_004624754:22,714,432...22,720,504 		JBrowse link
lung growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggcx gamma-glutamyl carboxylase ISO RGD PMID:2717270 RGD:11040517 NCBI chrNW_004624749:17,579,690...17,595,111
Ensembl chrNW_004624749:17,579,661...17,593,150 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO RGD PMID:8879189 RGD:11087558 NCBI chrNW_004624761:15,223,789...15,269,685
Ensembl chrNW_004624761:15,225,356...15,269,810 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO RGD PMID:8879189 RGD:11087558 NCBI chrNW_004624774:9,432,765...9,469,690
Ensembl chrNW_004624774:9,432,541...9,469,881 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO (PMID:18256198) MGI PMID:18256198 NCBI chrNW_004624763:23,067,682...23,182,945
Ensembl chrNW_004624763:23,067,691...23,182,059 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287183) Ensembl
MGI		 PMID:11287183 GO_REF:0000107 NCBI chrNW_004624751:20,091,612...20,096,581
Ensembl chrNW_004624751:20,091,609...20,096,563 		JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19686689)
(PMID:19805295)		 Ensembl
MGI		 PMID:19686689 PMID:19805295 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO (PMID:19686689) MGI PMID:19686689 NCBI chrNW_004624827:2,045,733...2,088,284
Ensembl chrNW_004624827:2,045,595...2,089,442 		JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO (PMID:19686689) MGI PMID:19686689 NCBI chrNW_004624772:8,305,042...8,319,882
Ensembl chrNW_004624772:8,304,708...8,319,349 		JBrowse link
lung lobe development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO RGD PMID:15991191 RGD:8916959 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
lung lobe formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:17142311) MGI PMID:17142311 NCBI chrNW_004624758:25,278,878...25,319,317
Ensembl chrNW_004624758:25,278,874...25,319,318 		JBrowse link
lung lobe morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16989802) MGI PMID:16989802 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:11493558) MGI PMID:11493558 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within ISO (PMID:21377456) MGI PMID:21377456 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358 		JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Lif LIF interleukin 6 family cytokine acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624747:6,558,872...6,565,207
Ensembl chrNW_004624747:6,558,817...6,565,281 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (PMID:20215345) MGI PMID:20215345 NCBI chrNW_004624830:268,764...334,660 JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:9731532) MGI PMID:9731532 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:18990706) MGI PMID:18990706 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO (PMID:12777251) MGI PMID:12777251 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31837950) Ensembl
MGI		 PMID:31837950 GO_REF:0000107 NCBI chrNW_004624745:31,125,136...31,140,126
Ensembl chrNW_004624745:31,125,265...31,139,318 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16937369) MGI PMID:16937369 NCBI chrNW_004624872:4,096,001...4,102,392 JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15800000) Ensembl
MGI		 PMID:15800000 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:10411502) MGI PMID:10411502 NCBI chrNW_004624831:1,251,991...1,259,247
Ensembl chrNW_004624831:1,253,044...1,257,741 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO (PMID:16214823) MGI PMID:16214823 NCBI chrNW_004624955:234,289...239,541
Ensembl chrNW_004624955:231,506...239,508 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:11493558) MGI PMID:11493558 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within ISO (PMID:31582725) MGI PMID:31582725 NCBI chrNW_004624765:19,912,623...20,105,016
Ensembl chrNW_004624765:19,923,297...20,042,840 		JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:31582725) MGI PMID:31582725 NCBI chrNW_004624754:22,888,052...22,900,685
Ensembl chrNW_004624754:22,892,226...22,898,807 		JBrowse link
G Hps1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (PMID:12777251) MGI PMID:12777251 NCBI chrNW_004624737:10,008,807...10,042,928
Ensembl chrNW_004624737:10,007,777...10,041,100 		JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (PMID:17717145) MGI PMID:17717145 NCBI chrNW_004624741:897,038...898,249
Ensembl chrNW_004624741:896,932...898,343 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624828:5,489,085...5,511,166
Ensembl chrNW_004624828:5,488,814...5,511,445 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624782:13,150,824...13,158,327
Ensembl chrNW_004624782:13,152,039...13,159,113 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within ISO (PMID:18324732) MGI PMID:18324732 NCBI chrNW_004624913:481,236...529,083
Ensembl chrNW_004624913:481,207...529,070 		JBrowse link
G Nog noggin acts_upstream_of_or_within ISO (PMID:16712836) MGI PMID:16712836 NCBI chrNW_004624795:11,696,102...11,697,367
Ensembl chrNW_004624795:11,696,353...11,697,051 		JBrowse link
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO (PMID:16467571) MGI PMID:16467571 NCBI chrNW_004624740:16,074,027...16,082,139
Ensembl chrNW_004624740:16,074,141...16,082,223 		JBrowse link
G Rpl13a ribosomal protein L13a acts_upstream_of_or_within ISO (PMID:23460747) MGI PMID:23460747 NCBI chrNW_004624832:4,728,298...4,732,397
Ensembl chrNW_004624832:4,727,899...4,732,367 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (PMID:20215345) MGI PMID:20215345 NCBI chrNW_004624830:268,764...334,660 JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10500184) MGI PMID:10500184 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chrNW_004624846:4,043,010...4,046,660
Ensembl chrNW_004624846:4,044,893...4,046,248 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287183) Ensembl
MGI		 PMID:11287183 GO_REF:0000107 NCBI chrNW_004624751:20,091,612...20,096,581
Ensembl chrNW_004624751:20,091,609...20,096,563 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
G Stk40 serine/threonine kinase 40 acts_upstream_of_or_within ISO (PMID:23293024) MGI PMID:23293024 NCBI chrNW_004624764:19,255,300...19,298,956
Ensembl chrNW_004624764:19,255,300...19,287,162 		JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10572052) Ensembl
MGI		 PMID:10572052 GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:18990706) MGI PMID:18990706 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027 		JBrowse link
lung neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:9126746) MGI PMID:9126746 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339 		JBrowse link
lung proximal/distal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15531758) Ensembl
MGI		 PMID:15531758 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
lung saccule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 acts_upstream_of_or_within ISO (PMID:24860998) MGI PMID:24860998 NCBI chrNW_004624741:188,985...258,065
Ensembl chrNW_004624741:188,745...250,142 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (PMID:21408140) MGI PMID:21408140 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within ISO (PMID:17164424) MGI PMID:17164424 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within ISO (PMID:16049328) MGI PMID:16049328 NCBI chrNW_004624767:20,845,949...20,861,169
Ensembl chrNW_004624767:20,845,949...20,860,673 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17164424) MGI PMID:17164424 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517 		JBrowse link
G Ptges3 prostaglandin E synthase 3 acts_upstream_of_or_within ISO (PMID:17438133) MGI PMID:17438133 NCBI chrNW_004624802:11,360,056...11,392,911
Ensembl chrNW_004624802:11,360,041...11,395,390 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO (PMID:28811219) MGI PMID:28811219 NCBI chrNW_004624801:7,552,644...7,644,755
Ensembl chrNW_004624801:7,552,030...7,638,834 		JBrowse link
lung secretory cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Foxp4 forkhead box P4 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chrNW_004624754:17,402,788...17,445,469
Ensembl chrNW_004624754:17,404,125...17,428,736 		JBrowse link
lung smooth muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
lung vasculature development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO (PMID:17992660) UniProt PMID:17992660 NCBI chrNW_004624741:7,706,205...7,717,677
Ensembl chrNW_004624741:7,706,236...7,719,484 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:17992660) UniProt PMID:17992660 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:17992660) UniProt PMID:17992660 NCBI chrNW_004624765:13,849,689...13,950,839
Ensembl chrNW_004624765:13,857,062...13,947,683 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in ISO (MGI:4366137|PMID:19710174) UniProt PMID:19710174 MGI:4366137 NCBI chrNW_004624818:3,868,089...3,882,960
Ensembl chrNW_004624818:3,868,814...3,882,960 		JBrowse link
G Foxf1 forkhead box F1 involved_in ISO (PMID:19500772) DFLAT PMID:19500772 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (PMID:17717145) MGI PMID:17717145 NCBI chrNW_004624741:897,038...898,249
Ensembl chrNW_004624741:896,932...898,343 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983) MGI PMID:19036983 NCBI chrNW_004624776:16,954,368...17,086,377
Ensembl chrNW_004624776:16,954,507...17,086,337 		JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Lif LIF interleukin 6 family cytokine acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624747:6,558,872...6,565,207
Ensembl chrNW_004624747:6,558,817...6,565,281 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:304,890...413,655
Ensembl chrNW_004624781:389,481...413,728 		JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10572052) Ensembl
MGI		 PMID:10572052 GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (PMID:11169844) MGI PMID:11169844 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
lung-associated mesenchyme development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18533146) Ensembl
MGI		 PMID:18533146 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Dppa2 developmental pluripotency associated 2 acts_upstream_of_or_within ISO (PMID:21896782) MGI PMID:21896782 NCBI chrNW_004624731:39,749,759...39,757,389 JBrowse link
G Dppa4 developmental pluripotency associated 4 acts_upstream_of_or_within ISO (PMID:21896782) MGI PMID:21896782 NCBI chrNW_004624731:39,723,840...39,736,652 JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18533146) Ensembl
MGI		 PMID:18533146 GO_REF:0000107 NCBI chrNW_004624776:16,022,118...16,055,413
Ensembl chrNW_004624776:16,019,835...16,055,498 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (PMID:18533146) MGI PMID:18533146 NCBI chrNW_004624780:5,161,245...5,212,641
Ensembl chrNW_004624780:5,161,073...5,213,870 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:18533146)
(PMID:16989802)		 MGI PMID:16989802 PMID:18533146 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441679) Ensembl
MGI		 PMID:9441679 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within ISO (PMID:20704721) MGI PMID:20704721 NCBI chrNW_004624754:16,386,437...16,441,341
Ensembl chrNW_004624754:16,386,296...16,440,681 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:9731532) MGI PMID:9731532 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:9757009) UniProt PMID:9757009 NCBI chrNW_004624817:931,686...952,474
Ensembl chrNW_004624817:932,970...952,326 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027 		JBrowse link
mesenchymal cell differentiation involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16989802) Ensembl
MGI		 PMID:16989802 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16989802) MGI PMID:16989802 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
mesenchymal cell proliferation involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17128274), (PMID:18231602) Ensembl
MGI		 PMID:17128274 PMID:18231602 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16989802) MGI PMID:16989802 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
G Phf14 PHD finger protein 14 acts_upstream_of ISO (PMID:22730381) MGI PMID:22730381 NCBI chrNW_004624827:8,122,179...8,337,721
Ensembl chrNW_004624827:8,122,307...8,366,113 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:9006067) MGI PMID:9006067 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:5805984|PMID:27720610) UniProt PMID:27720610 MGI:5805984 NCBI chrNW_004624871:2,428,757...2,437,447
Ensembl chrNW_004624871:2,429,407...2,437,447 		JBrowse link
mesenchymal-epithelial cell signaling involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15531758) Ensembl
MGI		 PMID:15531758 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnf tumor necrosis factor involved_in ISO (PMID:17350185) UniProt PMID:17350185 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
negative regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfib nuclear factor I B involved_in ISO (MGI:5049839|PMID:21513708) UniProt PMID:21513708 MGI:5049839 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424 		JBrowse link
negative regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Foxp4 forkhead box P4 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chrNW_004624754:17,402,788...17,445,469
Ensembl chrNW_004624754:17,404,125...17,428,736 		JBrowse link
negative regulation of mesenchymal cell proliferation involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfib nuclear factor I B involved_in ISO (MGI:5049839|PMID:21513708) UniProt PMID:21513708 MGI:5049839 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424 		JBrowse link
G Phf14 PHD finger protein 14 acts_upstream_of_or_within ISO (PMID:22730381) MGI PMID:22730381 NCBI chrNW_004624827:8,122,179...8,337,721
Ensembl chrNW_004624827:8,122,307...8,366,113 		JBrowse link
nose development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:3,851,361...3,885,609
Ensembl chrNW_004624768:3,851,257...3,885,609 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 ISO (PMID:15300250)
(PMID:16207732)		 BHF-UCL
MGI		 PMID:15300250 PMID:16207732 NCBI chrNW_004624744:31,103,053...31,302,314
Ensembl chrNW_004624744:31,103,059...31,235,623 		JBrowse link
G Gng8 G protein subunit gamma 8 acts_upstream_of_or_within ISO (PMID:23836683) MGI PMID:23836683 NCBI chrNW_004624832:6,937,309...6,941,101
Ensembl chrNW_004624832:6,937,339...6,940,735 		JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (PMID:9620767) MGI PMID:9620767 NCBI chrNW_004624822:74,344...102,484
Ensembl chrNW_004624822:74,373...101,828 		JBrowse link
G Msx1 msh homeobox 1 involved_in ISO (MGI:65526|PMID:7914451) UniProt PMID:7914451 MGI:65526 NCBI chrNW_004624755:21,857,360...21,861,235
Ensembl chrNW_004624755:21,857,461...21,861,337 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) MGI PMID:17473173 NCBI chrNW_004624744:17,838,047...17,868,423
Ensembl chrNW_004624744:17,837,609...17,868,431 		JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (PMID:17553904) MGI PMID:17553904 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115 		JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:28067909), (PMID:28067911) UniProt PMID:28067909 PMID:28067911 NCBI chrNW_004624770:13,000,532...13,123,346
Ensembl chrNW_004624770:13,000,316...13,124,031 		JBrowse link
nose morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chrNW_004624818:7,674,184...7,736,249
Ensembl chrNW_004624818:7,673,203...7,736,255 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:304,890...413,655
Ensembl chrNW_004624781:389,481...413,728 		JBrowse link
olfactory pit development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17207476) Ensembl
MGI		 PMID:17207476 GO_REF:0000107 NCBI chrNW_004624768:3,851,361...3,885,609
Ensembl chrNW_004624768:3,851,257...3,885,609 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO (PMID:9108377) MGI PMID:9108377 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339 		JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12533617) Ensembl
MGI		 PMID:12533617 GO_REF:0000107 NCBI chrNW_004624813:3,760,890...3,765,309
Ensembl chrNW_004624813:3,760,661...3,765,517 		JBrowse link
olfactory placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou2f1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chrNW_004624826:5,334,365...5,501,421
Ensembl chrNW_004624826:5,334,366...5,493,821 		JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:3833798|PMID:19027001) UniProt PMID:19027001 MGI:3833798 NCBI chrNW_004624734:40,397,276...40,409,951
Ensembl chrNW_004624734:40,397,559...40,409,997 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871 		JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (PMID:20223754) MGI PMID:20223754 NCBI chrNW_004624752:3,426,317...3,537,219
Ensembl chrNW_004624752:3,425,901...3,535,400 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:20223754) MGI PMID:20223754 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708 		JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (PMID:20223754) MGI PMID:20223754 NCBI chrNW_004624752:3,426,317...3,537,219
Ensembl chrNW_004624752:3,425,901...3,535,400 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:20223754) MGI PMID:20223754 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708 		JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (MGI:4456940|PMID:17350185) UniProt PMID:17350185 MGI:4456940 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18533146) Ensembl
MGI		 PMID:18533146 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO RGD PMID:8879189 RGD:11087558 NCBI chrNW_004624761:15,223,789...15,269,685
Ensembl chrNW_004624761:15,225,356...15,269,810 		JBrowse link
positive regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISO (MGI:5467649|PMID:23219958) CACAO PMID:23219958 MGI:5467649 NCBI chrNW_004624764:6,874,453...6,891,952 JBrowse link
G Fgf7 fibroblast growth factor 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9740653) MGI
Ensembl		 PMID:9740653 GO_REF:0000107 NCBI chrNW_004624731:10,413,715...10,468,660
Ensembl chrNW_004624731:10,413,645...10,468,690 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:16989802) MGI PMID:16989802 NCBI chrNW_004624737:25,052,698...25,158,346
Ensembl chrNW_004624737:25,052,606...25,158,529 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:17428829) MGI PMID:17428829 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (PMID:24661562) MGI PMID:24661562 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23132731) MGI
Ensembl		 PMID:23132731 GO_REF:0000107 NCBI chrNW_004624790:10,812,013...10,817,414
Ensembl chrNW_004624790:10,812,013...10,817,833 		JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO (PMID:19686689) MGI PMID:19686689 NCBI chrNW_004624827:2,045,733...2,088,284
Ensembl chrNW_004624827:2,045,595...2,089,442 		JBrowse link
positive regulation of lung alveolus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:23962064 RGD:10395379 NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054 		JBrowse link
positive regulation of lung ciliated cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486 		JBrowse link
G Tp73 tumor protein p73 involved_in ISO (PMID:34077761) UniProt PMID:34077761 NCBI chrNW_004624818:6,775,588...6,817,187
Ensembl chrNW_004624818:6,775,599...6,809,289 		JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:16364283) MGI PMID:16364283 NCBI chrNW_004624737:3,897,907...3,903,828
Ensembl chrNW_004624737:3,897,871...3,904,083 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) MGI PMID:17473173 NCBI chrNW_004624744:17,838,047...17,868,423
Ensembl chrNW_004624744:17,837,609...17,868,431 		JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24191021) MGI PMID:24191021 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24191021) MGI PMID:24191021 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Foxp4 forkhead box P4 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chrNW_004624754:17,402,788...17,445,469
Ensembl chrNW_004624754:17,404,125...17,428,736 		JBrowse link
right lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10500184) MGI PMID:10500184 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
right lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:11493558) MGI PMID:11493558 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
secretion by lung epithelial cell involved in lung growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fgf7 fibroblast growth factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:10,413,715...10,468,660
Ensembl chrNW_004624731:10,413,645...10,468,690 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (PMID:19515693) MGI PMID:19515693 NCBI chrNW_004624758:5,664,287...5,720,061
Ensembl chrNW_004624758:5,662,661...5,719,865 		JBrowse link
smoothened signaling pathway involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:28859094) MGI PMID:28859094 NCBI chrNW_004624763:16,126,582...16,393,476
Ensembl chrNW_004624763:16,126,938...16,392,804 		JBrowse link
trachea cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rara retinoic acid receptor alpha acts_upstream_of_or_within ISO (PMID:9376317) MGI PMID:9376317 NCBI chrNW_004624795:2,935,432...2,975,226
Ensembl chrNW_004624795:2,934,731...2,967,232 		JBrowse link
G Rarg retinoic acid receptor gamma acts_upstream_of_or_within ISO (PMID:8388780) MGI PMID:8388780 NCBI chrNW_004624904:1,255,854...1,277,946 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
trachea cartilage morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441679) Ensembl
MGI		 PMID:9441679 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18256198) MGI PMID:18256198 NCBI chrNW_004624752:25,605,444...25,756,573
Ensembl chrNW_004624752:25,605,302...25,751,893 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO (PMID:18256198) MGI PMID:18256198 NCBI chrNW_004624763:23,067,682...23,182,945
Ensembl chrNW_004624763:23,067,691...23,182,059 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chrNW_004624752:3,818,073...3,856,602
Ensembl chrNW_004624752:3,818,025...3,857,027 		JBrowse link
trachea development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano1 anoctamin 1 involved_in ISO (MGI:3805598|PMID:18585372) UniProt PMID:18585372 MGI:3805598 NCBI chrNW_004624767:17,070,989...17,246,822
Ensembl chrNW_004624767:17,072,515...17,174,970 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Foxf1 forkhead box F1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19500772)
(PMID:11493558)		 DFLAT
MGI		 PMID:11493558 PMID:19500772 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Hydin HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (PMID:18250199) MGI PMID:18250199 NCBI chrNW_004624746:12,997,012...13,417,034 JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:9731532) MGI PMID:9731532 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
trachea formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:18692041) MGI PMID:18692041 NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19805295) Ensembl
MGI		 PMID:19805295 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624828:5,489,085...5,511,166
Ensembl chrNW_004624828:5,488,814...5,511,445 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:25100655) MGI PMID:25100655 NCBI chrNW_004624782:13,150,824...13,158,327
Ensembl chrNW_004624782:13,152,039...13,159,113 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:18990706) MGI PMID:18990706 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
trachea gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eda ectodysplasin A acts_upstream_of_or_within ISO (PMID:15973734) MGI PMID:15973734 NCBI chrNW_004624891:55,310...489,072
Ensembl chrNW_004624891:58,991...488,788 		JBrowse link
G Edaradd EDAR associated via death domain acts_upstream_of_or_within ISO (PMID:15973734) MGI PMID:15973734 NCBI chrNW_004624775:14,132,455...14,191,604
Ensembl chrNW_004624775:14,132,710...14,191,423 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (PMID:10498680) MGI PMID:10498680 NCBI chrNW_004624830:1,320,034...1,422,774
Ensembl chrNW_004624830:1,321,387...1,424,389 		JBrowse link
trachea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18231602), (PMID:18692041) Ensembl
MGI		 PMID:18231602 PMID:18692041 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15295088), (PMID:9441679) Ensembl
MGI		 PMID:9441679 PMID:15295088 GO_REF:0000107 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:9731532) MGI PMID:9731532 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (PMID:18990706) MGI PMID:18990706 NCBI chrNW_004624788:8,447,679...8,535,821
Ensembl chrNW_004624788:8,447,542...8,535,959 		JBrowse link
type I pneumocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (PMID:21408140) MGI PMID:21408140 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Klf2 KLF transcription factor 2 acts_upstream_of_or_within ISO (PMID:22001906) MGI PMID:22001906 NCBI chrNW_004624908:1,021,865...1,023,279 JBrowse link
G Kras KRAS proto-oncogene, GTPase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:24058167) Ensembl
MGI		 PMID:24058167 GO_REF:0000107 NCBI chrNW_004624752:13,809,741...13,847,020
Ensembl chrNW_004624752:13,809,775...13,844,166 		JBrowse link
G Lta4h leukotriene A4 hydrolase ISO RGD PMID:15805137 RGD:2316585 NCBI chrNW_004624750:11,274,506...11,314,683
Ensembl chrNW_004624750:11,274,664...11,314,581 		JBrowse link
G Ncor2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:22001906) MGI PMID:22001906 NCBI chrNW_004624747:23,777,645...23,887,804
Ensembl chrNW_004624747:23,777,325...23,865,804 		JBrowse link
G Nfib nuclear factor I B involved_in ISO (MGI:5049839|PMID:21513708) UniProt PMID:21513708 MGI:5049839 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of ISO (PMID:24058167) MGI PMID:24058167 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Thra thyroid hormone receptor alpha acts_upstream_of_or_within ISO (PMID:22001906) MGI PMID:22001906 NCBI chrNW_004624795:3,109,663...3,132,494
Ensembl chrNW_004624795:3,108,854...3,132,464 		JBrowse link
G Thrb thyroid hormone receptor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22001906) Ensembl
MGI		 PMID:22001906 GO_REF:0000107 NCBI chrNW_004624788:1,950,888...2,348,895
Ensembl chrNW_004624788:1,950,890...2,349,343 		JBrowse link
type II pneumocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aimp2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 acts_upstream_of_or_within ISO (PMID:12819782) MGI PMID:12819782 NCBI chrNW_004624740:31,305,629...31,315,103
Ensembl chrNW_004624740:31,303,006...31,315,101 		JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15531758) Ensembl
MGI		 PMID:15531758 GO_REF:0000107 NCBI chrNW_004624759:10,904,626...10,983,509
Ensembl chrNW_004624759:10,904,989...10,983,574 		JBrowse link
G Fndc3b fibronectin type III domain containing 3B acts_upstream_of_or_within ISO (PMID:21704616) MGI PMID:21704616 NCBI chrNW_004624730:50,111,873...50,447,035
Ensembl chrNW_004624730:50,111,346...50,450,164 		JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within ISO (PMID:17164424) MGI PMID:17164424 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Igf1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Nfib nuclear factor I B involved_in ISO (MGI:5049839|PMID:21513708) UniProt PMID:21513708 MGI:5049839 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17164424) MGI PMID:17164424 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517 		JBrowse link
G Rbbp9 RB binding protein 9, serine hydrolase acts_upstream_of_or_within ISO (PMID:32484881) MGI PMID:32484881 NCBI chrNW_004624741:19,214,436...19,222,511
Ensembl chrNW_004624741:19,214,536...19,222,530 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15225
    multicellular organismal process 7138
      multicellular organism development 4723
        system development 4125
          respiratory system development 298
            bronchus development + 12
            diaphragm development + 12
            larynx development + 3
            lung development + 262
            nose development + 16
            open tracheal system development + 0
            trachea development + 22
Path 2
Term Annotations click to browse term
  biological_process 15225
    developmental process 6175
      anatomical structure development 5812
        multicellular organism development 4723
          system development 4125
            respiratory system development 298
              bronchus development + 12
              diaphragm development + 12
              larynx development + 3
              lung development + 262
              nose development + 16
              open tracheal system development + 0
              trachea development + 22
paths to the root