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ONTOLOGY REPORT - ANNOTATIONS


Term:respiratory system development
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Accession:GO:0060541 term browser browse the term
Definition:The progression of the respiratory system over time from its formation to its mature structure. The respiratory system carries out respiratory gaseous exchange.


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respiratory system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:1346729 NCBI chr 9:41,045,352...41,051,979
Ensembl chr 9:41,045,363...41,052,024
JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA acts_upstream_of_or_within ISO MGI:5563522 (MGI:5788088|PMID:25909911) RGD PMID:25909911 MGI:5788088 NCBI chr19:52,991,283...53,010,509 JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO (MGI:1934408|PMID:11287183) RGD PMID:11287183 MGI:1934408 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO MGI:2182358|MGI:2182361|MGI:2182363 (MGI:1344237|PMID:10482234) RGD PMID:10482234 MGI:1344237 NCBI chr 4:2,376,350...2,381,308
Ensembl chr 4:2,376,958...2,381,271
JBrowse link
G Phox2b paired-like homeobox 2b involved_in ISO (MGI:4418003|PMID:19940179) RGD PMID:19940179 MGI:4418003 NCBI chr14:42,711,169...42,718,707
Ensembl chr14:42,714,315...42,717,010
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO MGI:1856877 (MGI:5469952|PMID:22945695) RGD PMID:22945695 MGI:5469952 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO MGI:5295267 (MGI:5292446|PMID:21715716) RGD PMID:21715716 MGI:5292446 NCBI chr 2:58,901,937...59,084,194
Ensembl chr 2:58,901,939...59,181,863
Ensembl chr 2:58,901,939...59,181,863
JBrowse link
G Speg striated muscle enriched protein kinase acts_upstream_of_or_within ISO MGI:4830540 (MGI:4830240|PMID:19118250) RGD PMID:19118250 MGI:4830240 NCBI chr 9:82,571,333...82,628,684
Ensembl chr 9:82,571,269...82,628,709
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO (MGI:1934408|PMID:11287183) RGD PMID:11287183 MGI:1934408 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:10572052 GO_REF:0000024 MGI:1347485 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5558098 (MGI:5544506|PMID:24302887)
Ensembl
RGD
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
alveolar primary septum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
alveolar secondary septum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:95525 (MGI:1309575|PMID:9716527) RGD PMID:9716527 MGI:1309575 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO MGI:95524 (MGI:1309575|PMID:9716527) RGD PMID:9716527 MGI:1309575 NCBI chr17:9,990,072...10,004,339
Ensembl chr17:9,990,078...10,004,321
JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653543 (MGI:3613241|PMID:16214823)
Ensembl
RGD
PMID:16214823 GO_REF:0000107 MGI:3613241 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
bronchiole development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (MGI:1195049|PMID:9441679) RGD PMID:9441679 MGI:1195049 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO MGI:1926484 (MGI:3040752|PMID:12634787) RGD PMID:12634787 MGI:3040752 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926484|MGI:2386174 (MGI:3040752|PMID:12634787)
Ensembl
RGD
PMID:12634787 GO_REF:0000107 MGI:3040752 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:10572052 GO_REF:0000024 MGI:1347485 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO MGI:1926484|MGI:2386174 (MGI:3040752|PMID:12634787) RGD PMID:12634787 MGI:3040752 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
bronchiole morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647|MGI:3629660 (MGI:3578606|PMID:15800000) RGD PMID:15800000 MGI:3578606 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
bronchus cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2429649 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
bronchus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513 (MGI:3829327|PMID:18990706) RGD PMID:18990706 MGI:3829327 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
bronchus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513 (MGI:3829327|PMID:18990706) RGD PMID:18990706 MGI:3829327 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3788965|PMID:18367557)
Ensembl
RGD
PMID:18367557 GO_REF:0000107 MGI:3788965 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1345138|MGI:1345139 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3629660 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within ISO MGI:1099809|MGI:1345138 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr 2:124,400,689...124,405,331
Ensembl chr 2:124,400,679...124,405,331
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO MGI:1099809|MGI:1345139 (MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:5052190 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO MGI:3053959|MGI:5316446 (MGI:5586932|PMID:25043473) RGD PMID:25043473 MGI:5586932 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl
RGD
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO MGI:4124060 (MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:5300435 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Tnc tenascin C IMP RGD PMID:16928692 RGD:4889612 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
club cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108067 (MGI:3695537|PMID:17164424)
Ensembl
RGD
PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:5049839|PMID:21513708)
UniProt
RGD
PMID:21513708 GO_REF:0000024 MGI:5049839 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107516 (MGI:3695537|PMID:17164424)
Ensembl
RGD
PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (MGI:5440802|PMID:22797898) RGD PMID:22797898 MGI:5440802 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
diaphragm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase IEP RGD PMID:9618389 RGD:4139909 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP RGD PMID:9618389 RGD:4139909 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Disp1 dispatched RND transporter family member 1 involved_in ISO (PMID:20799323) RGD PMID:20799323 NCBI chr13:101,451,932...101,597,570
Ensembl chr13:101,451,932...101,597,570
JBrowse link
G Fgfrl1 fibroblast growth factor receptor-like 1 acts_upstream_of_or_within ISO MGI:3771861 (MGI:3771403|PMID:17986259) RGD PMID:17986259 MGI:3771403 NCBI chr14:2,020,110...2,032,169
Ensembl chr14:2,018,500...2,032,593
JBrowse link
G Kcnab1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 IEP RGD PMID:12652645 RGD:9743957 NCBI chr 2:155,555,798...156,011,438
Ensembl chr 2:155,718,359...156,009,526
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO MGI:2182358|MGI:2182361|MGI:2182363 (MGI:1344237|PMID:10482234) RGD PMID:10482234 MGI:1344237 NCBI chr 4:2,376,350...2,381,308
Ensembl chr 4:2,376,958...2,381,271
JBrowse link
G Msc musculin involved_in ISO UniProtKB:O35437 (MGI:3653784|PMID:12493912) RGD PMID:12493912 MGI:3653784 NCBI chr 5:3,954,902...3,956,974
Ensembl chr 5:3,955,227...3,956,572
JBrowse link
G Myt1 myelin transcription factor 1 acts_upstream_of_or_within ISO MGI:3765054 (MGI:3763794|PMID:17928203) RGD PMID:17928203 MGI:3763794 NCBI chr 3:177,281,365...177,341,550
Ensembl chr 3:177,310,753...177,341,547
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA
ISO
GO_REF:0000107
(PMID:17273977)
Ensembl
RGD
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:O88940 (MGI:3653784|PMID:12493912)
UniProt
RGD
PMID:12493912 GO_REF:0000024 MGI:3653784 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:62488|PMID:8395349)
UniProt
RGD
PMID:8395349 GO_REF:0000024 MGI:62488 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsh cathepsin H involved_in ISS
ISO
GO_REF:0000024
(MGI:3722010|PMID:17500053)
UniProt
RGD
PMID:17500053 GO_REF:0000024 MGI:3722010 NCBI chr 8:97,439,155...97,458,293
Ensembl chr 8:97,439,161...97,458,287
JBrowse link
epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346867 (MGI:5588044|PMID:25100655)
Ensembl
RGD
PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 acts_upstream_of_or_within ISO MGI:1346866 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr 7:11,458,971...11,478,520
Ensembl chr 7:11,458,967...11,478,489
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEP RGD PMID:8769111 RGD:2306315 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567 (MGI:3773938|PMID:18231602)
Ensembl
RGD
PMID:18231602 GO_REF:0000107 MGI:3773938 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctsd cathepsin D NOT|involved_in ISO (MGI:3722010|PMID:17500053) RGD PMID:17500053 MGI:3722010 NCBI chr 1:215,541,570...215,553,446
Ensembl chr 1:215,541,542...215,553,451
JBrowse link
G Ctsl cathepsin L NOT|involved_in ISO (MGI:3722010|PMID:17500053) RGD PMID:17500053 MGI:3722010 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Ctsz cathepsin Z acts_upstream_of_or_within ISO (PMID:17500053) RGD PMID:17500053 NCBI chr 3:172,527,107...172,537,877
Ensembl chr 3:172,527,107...172,537,877
JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within ISO (MGI:2156962|PMID:11798066) RGD PMID:11798066 MGI:2156962 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO MGI:3757646 (MGI:5487693|PMID:23466739) RGD PMID:23466739 MGI:5487693 NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO MGI:1924661 (MGI:5699497|PMID:26371508) RGD PMID:26371508 MGI:5699497 NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1917326 (MGI:5699497|PMID:26371508)
Ensembl
RGD
PMID:26371508 GO_REF:0000107 MGI:5699497 NCBI chr19:38,113,412...38,120,578
Ensembl chr19:38,113,412...38,120,578
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5912649|PMID:28859094) RGD PMID:28859094 MGI:5912649 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647|MGI:1927833|MGI:3629660 (MGI:1101385|PMID:9428423), (MGI:1309706|PMID:9784490), (MGI:1327513|PMID:9916808), (MGI:3578606|PMID:15800000), (MGI:3609523|PMID:16169547), (MGI:3613102|PMID:16375885), (MGI:3716020|PMID:17560563) RGD PMID:9428423 PMID:9784490 PMID:9916808 PMID:15800000 PMID:16169547 PMID:16375885 PMID:17560563 MGI:1101385 MGI:1309706 MGI:1327513 MGI:3578606 MGI:3609523 MGI:3613102 MGI:3716020 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3044679 (MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:5523405 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1347476 (MGI:3579763|PMID:15668254)
Ensembl
RGD
PMID:15668254 GO_REF:0000107 MGI:3579763 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347472 (MGI:3579763|PMID:15668254) RGD PMID:15668254 MGI:3579763 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Hhip Hedgehog-interacting protein acts_upstream_of_or_within ISO MGI:2450891 (MGI:2450020|PMID:12569124) RGD PMID:12569124 MGI:2450020 NCBI chr19:31,525,134...31,614,487
Ensembl chr19:31,524,671...31,614,246
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO (MGI:5638831|PMID:24661562) RGD PMID:24661562 MGI:5638831 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (MGI:1195049|PMID:9441679) RGD PMID:9441679 MGI:1195049 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
G Kras KRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:98371 (MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:5523405 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO (MGI:2156962|PMID:11798066), (MGI:80991|PMID:1907584) RGD PMID:1907584 PMID:11798066 MGI:2156962 MGI:80991 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO
IEA
(PMID:8675988)
GO_REF:0000107
RGD
Ensembl
PMID:8675988 GO_REF:0000107 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:3045965 (MGI:3774879|PMID:18256198) RGD PMID:18256198 MGI:3774879 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within IEP
ISO
MGI:1857796 (MGI:1277744|PMID:9731532), (MGI:1346236|PMID:10500184) RGD PMID:9731532 PMID:10500184, PMID:8769111 MGI:1277744 MGI:1346236, RGD:2306315 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3795352|PMID:18374910) RGD PMID:18374910 MGI:3795352 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2385468|MGI:96680 (MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:5523405 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
larynx morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1917550 (MGI:5897919|PMID:28177282) RGD PMID:28177282 MGI:5897919 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:3531090|MGI:99604 (MGI:5897919|PMID:28177282) RGD PMID:28177282 MGI:5897919 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:5897919|PMID:28177282) RGD PMID:28177282 MGI:5897919 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:2668337 (MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
left lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1346236|PMID:10500184)
Ensembl
RGD
PMID:10500184 GO_REF:0000107 MGI:1346236 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
left lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:1346729 NCBI chr 9:41,045,352...41,051,979
Ensembl chr 9:41,045,363...41,052,024
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:2136268 (MGI:2135655|PMID:11493526) RGD PMID:11493526 MGI:2135655 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
lobar bronchus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (MGI:3788965|PMID:18367557) RGD PMID:18367557 MGI:3788965 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
lobar bronchus epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamtsl2 ADAMTS-like 2 acts_upstream_of_or_within ISO (MGI:5638958|PMID:25762570) RGD PMID:25762570 MGI:5638958 NCBI chr 3:5,624,473...5,654,890
Ensembl chr 3:5,624,506...5,654,910
JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (MGI:1195049|PMID:9441679) RGD PMID:9441679 MGI:1195049 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
lung alveolus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 NOT|acts_upstream_of_or_within ISO MGI:3528440 (MGI:3829841|PMID:18957418)
MGI:3809668 (MGI:3807143|PMID:18632686)
RGD PMID:18632686 PMID:18957418 MGI:3807143 MGI:3829841 NCBI chr 9:78,521,477...78,693,421
Ensembl chr 9:78,522,464...78,693,028
JBrowse link
G Ace angiotensin I converting enzyme IMP RGD PMID:22587910 RGD:6893470 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117|MGI:2683027 (MGI:1861066|PMID:10899903) RGD PMID:10899903 MGI:1861066 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097 (MGI:54141|PMID:937819) RGD PMID:937819 MGI:54141 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Atxn1 ataxin 1 acts_upstream_of_or_within ISO MGI:1918972|MGI:3694797 (MGI:5298126|PMID:22014525) RGD PMID:22014525 MGI:5298126 NCBI chr17:19,160,986...19,533,814
Ensembl chr17:19,249,952...19,533,814
JBrowse link
G Atxn1l ataxin 1-like acts_upstream_of_or_within ISO MGI:104783|MGI:1918972|MGI:5301616 (MGI:5298126|PMID:22014525) RGD PMID:22014525 MGI:5298126 NCBI chr19:41,932,356...41,939,456 JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (MGI:3799581|PMID:18552156) RGD PMID:18552156 MGI:3799581 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Cic capicua transcriptional repressor acts_upstream_of_or_within ISO MGI:104783|MGI:3694797|MGI:4125985 (MGI:5298126|PMID:22014525) RGD PMID:22014525 MGI:5298126 NCBI chr 1:82,135,440...82,163,007
Ensembl chr 1:82,151,669...82,163,005
JBrowse link
G Dbn1 drebrin 1 IEP RGD PMID:15928322 RGD:10398812 NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820
JBrowse link
G Edn2 endothelin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5519239 (MGI:5514104|PMID:23676500)
Ensembl
RGD
PMID:23676500 GO_REF:0000107 MGI:5514104 NCBI chr 5:139,098,472...139,106,396
Ensembl chr 5:139,100,898...139,105,792
JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366137|PMID:19710174)
UniProt
RGD
PMID:19710174 GO_REF:0000024 MGI:4366137 NCBI chr 5:167,951,564...167,966,011
Ensembl chr 5:167,952,728...167,966,009
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:3629660|MGI:95523 (MGI:3688953|PMID:16989802), (MGI:3716020|PMID:17560563) RGD PMID:16989802 PMID:17560563 MGI:3688953 MGI:3716020 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:1099809|MGI:3629660 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856694 (MGI:5582954|PMID:24733830)
Ensembl
RGD
PMID:24733830 GO_REF:0000107 MGI:5582954 NCBI chr10:35,078,782...35,120,296
Ensembl chr10:35,078,726...35,121,599
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:3584266 (MGI:3710027|PMID:17428829) RGD PMID:17428829 MGI:3710027 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
JBrowse link
G Fzd1 frizzled class receptor 1 IEP RGD PMID:17911382 RGD:2304247 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Gh1 growth hormone 1 IMP RGD PMID:18985281 RGD:2315627 NCBI chr10:94,486,204...94,488,181
Ensembl chr10:94,486,205...94,488,180
JBrowse link
G Hopx HOP homeobox acts_upstream_of_or_within ISO MGI:2389244 (MGI:3709528|PMID:16510470) RGD PMID:16510470 MGI:3709528 NCBI chr14:33,354,803...33,362,547
Ensembl chr14:33,354,807...33,362,551
JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (MGI:3606710|PMID:15295088), (MGI:3665532|PMID:17003488) RGD PMID:15295088 PMID:17003488 MGI:3606710 MGI:3665532 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3715259 (MGI:3715036|PMID:17405882) RGD PMID:17405882 MGI:3715036 NCBI chr 9:42,620,006...42,659,184
Ensembl chr 9:42,620,006...42,659,184
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO MGI:1926485|MGI:96787 (MGI:3640953|PMID:16691571) RGD PMID:16691571 MGI:3640953 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 involved_in ISO (MGI:3039207|PMID:15010534) RGD PMID:15010534 MGI:3039207 NCBI chr 9:80,154,230...80,166,813
Ensembl chr 9:80,150,211...80,167,033
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO MGI:1926484 (MGI:3040752|PMID:12634787) RGD PMID:12634787 MGI:3040752 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within ISO (MGI:2181852|PMID:12053176) RGD PMID:12053176 MGI:2181852 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96432 (MGI:3640953|PMID:16691571)
Ensembl
RGD
PMID:16691571 GO_REF:0000107 MGI:3640953 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Man1a2 mannosidase, alpha, class 1A, member 2 acts_upstream_of_or_within ISO MGI:3703789 (MGI:3703634|PMID:17121831) RGD PMID:17121831 MGI:3703634 NCBI chr 2:202,891,537...203,043,847
Ensembl chr 2:202,891,537...203,043,847
JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 acts_upstream_of_or_within ISO MGI:2150656 (MGI:3652665|PMID:16754854) RGD PMID:16754854 MGI:3652665 NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within ISO MGI:3527900 (MGI:3796918|PMID:18324732) RGD PMID:18324732 MGI:3796918 NCBI chr10:14,259,394...14,299,276
Ensembl chr10:14,260,787...14,299,167
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:21425435 RGD:8552971 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386174 (MGI:3040752|PMID:12634787)
Ensembl
RGD
PMID:12634787 GO_REF:0000107 MGI:3040752 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3052940 (MGI:4941650|PMID:21357509)
Ensembl
RGD
PMID:21357509 GO_REF:0000107 MGI:4941650 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Pdgfa platelet derived growth factor subunit A involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:1098909|PMID:9374392)
MGI:1926817|MGI:5548172 (MGI:3622881|PMID:11803579), (MGI:5543868|PMID:23938297)
UniProt
RGD
PMID:9374392 PMID:11803579 PMID:23938297 GO_REF:0000024 MGI:1098909 MGI:3622881 MGI:5543868 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
G Pdpn podoplanin acts_upstream_of_or_within ISO MGI:2657021 (MGI:3703126|PMID:16869965) RGD PMID:16869965 MGI:3703126 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Pgr progesterone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3032652 (MGI:5576858|PMID:24190884)
Ensembl
RGD
PMID:24190884 GO_REF:0000107 MGI:5576858 NCBI chr 8:7,128,656...7,187,796
Ensembl chr 8:7,128,656...7,187,796
JBrowse link
G Phf14 PHD finger protein 14 acts_upstream_of_or_within ISO MGI:5426539 (MGI:5426441|PMID:22730381) RGD PMID:22730381 MGI:5426441 NCBI chr 4:38,241,189...38,420,199
Ensembl chr 4:38,240,728...38,420,205
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in ISO (MGI:4438146|PMID:19465597) RGD PMID:19465597 MGI:4438146 NCBI chr 6:6,427,657...6,436,974
Ensembl chr 6:6,427,657...6,436,974
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:2149117 (MGI:1346745|PMID:10518543) RGD PMID:10518543 MGI:1346745 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Pthlh parathyroid hormone-like hormone acts_upstream_of_or_within ISO MGI:2154515 (MGI:3042805|PMID:15162506) RGD PMID:15162506 MGI:3042805 NCBI chr 4:181,663,425...181,674,181 JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within ISO MGI:4364357 (MGI:5486592|PMID:23583643) RGD PMID:23583643 MGI:5486592 NCBI chr 3:21,621,976...21,676,789
Ensembl chr 3:21,623,041...21,670,014
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO (MGI:5494499|PMID:23325319) RGD PMID:23325319 MGI:5494499 NCBI chr 5:152,748,497...152,765,489
Ensembl chr 5:152,750,284...152,762,165
JBrowse link
G Sftpd surfactant protein D involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:9751757)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9751757 GO_REF:0000024 GO_REF:0000107 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (MGI:5469541|PMID:23085521) RGD PMID:23085521 MGI:5469541 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
G Slfn4 schlafen family member 4 IEP RGD PMID:17911382 RGD:2304247 NCBI chr10:70,411,686...70,435,162
Ensembl chr10:70,411,738...70,435,156
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:5469952|PMID:22945695)
Ensembl
RGD
PMID:22945695 GO_REF:0000107 MGI:5469952 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3795352|PMID:18374910) RGD PMID:18374910 MGI:3795352 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Stk40 serine/threonine kinase 40 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5496282 (MGI:5486391|PMID:23293024)
Ensembl
RGD
PMID:23293024 GO_REF:0000107 MGI:5486391 NCBI chr 5:144,112,612...144,150,653
Ensembl chr 5:144,114,012...144,150,647
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:10572052 GO_REF:0000024 MGI:1347485 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:3040752|PMID:12634787) RGD PMID:12634787 MGI:3040752 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO (MGI:77427|PMID:7493022) RGD PMID:7493022 MGI:77427 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:3716065 (MGI:3850579|PMID:19515693) RGD PMID:19515693 MGI:3850579 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO MGI:4124060 (MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:5300435 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Tns3 tensin 3 acts_upstream_of_or_within ISO MGI:3574415 (MGI:3531231|PMID:15733665) RGD PMID:15733665 MGI:3531231 NCBI chr14:88,673,922...88,907,874
Ensembl chr14:88,673,881...88,886,198
JBrowse link
G Vegfa vascular endothelial growth factor A IMP RGD PMID:16230500 RGD:1580552 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt5a Wnt family member 5A IEP RGD PMID:17911382 RGD:2304247 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Zfp157 zinc finger protein 157 acts_upstream_of_or_within ISO MGI:4124834 (MGI:5424261|PMID:22588720) RGD PMID:22588720 MGI:5424261 NCBI chr12:18,461,283...18,495,871
Ensembl chr12:18,464,781...18,487,178
JBrowse link
lung cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148569 (MGI:4361775|PMID:19805295)
Ensembl
RGD
PMID:19805295 GO_REF:0000107 MGI:4361775 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
lung ciliated cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:5049839|PMID:21513708)
UniProt
RGD
PMID:21513708 GO_REF:0000024 MGI:5049839 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
lung connective tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxfp1 relaxin family peptide receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3054831 (MGI:3054144|PMID:15256493)
Ensembl
RGD
PMID:15256493 GO_REF:0000107 MGI:3054144 NCBI chr 2:178,402,411...178,520,213
Ensembl chr 2:178,399,274...178,521,038
JBrowse link
lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aard alanine and arginine rich domain containing protein IEP RGD PMID:11997109 RGD:1304244 NCBI chr 7:91,588,458...91,593,299
Ensembl chr 7:91,588,458...91,593,297
JBrowse link
G Abca3 ATP binding cassette subfamily A member 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3722561|PMID:17540762), (MGI:6356490|PMID:20190032)
UniProt
RGD
PMID:17540762 PMID:20190032 GO_REF:0000024 MGI:3722561 MGI:6356490 NCBI chr10:13,723,365...13,780,558
Ensembl chr10:13,723,405...13,779,963
JBrowse link
G Ace angiotensin I converting enzyme IEP RGD PMID:7977726 RGD:8158036 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Acvr2b activin A receptor type 2B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108051 (MGI:3758991|PMID:17849440)
Ensembl
RGD
PMID:17849440 GO_REF:0000107 MGI:3758991 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:2155977 (MGI:74163|PMID:7670465) RGD PMID:7670465 MGI:74163 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 acts_upstream_of_or_within ISO MGI:2388161 (MGI:3621082|PMID:16556917) RGD PMID:16556917 MGI:3621082 NCBI chr10:36,098,051...36,304,416
Ensembl chr10:36,098,051...36,304,409
JBrowse link
G Ager advanced glycosylation end product-specific receptor IEP RGD PMID:17343756 RGD:1625339 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1857891 (MGI:3618454|PMID:16427040), (MGI:3663954|PMID:16806149) RGD PMID:16427040 PMID:16806149 MGI:3618454 MGI:3663954 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO MGI:2177763 (MGI:2675181|PMID:12777251) RGD PMID:12777251 MGI:2675181 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:18192591 RGD:4143284 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:18192591 RGD:4143284 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 IDA RGD PMID:9160843 RGD:1599262 NCBI chr16:53,998,604...54,030,006
Ensembl chr16:53,998,560...54,040,836
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:3703386|PMID:16287848)
UniProt
RGD
PMID:16287848 GO_REF:0000024 MGI:3703386 NCBI chr20:5,124,512...5,138,084
Ensembl chr20:5,125,349...5,138,084
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:2181190|MGI:3574949 (MGI:3618437|PMID:16414041) RGD PMID:16414041 MGI:3618437 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158390|MGI:3574949 (MGI:3618437|PMID:16414041) RGD PMID:16414041 MGI:3618437 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Casp1 caspase 1 IEP RGD PMID:12396474 RGD:5130192 NCBI chr 8:2,605,743...2,614,637
Ensembl chr 8:2,604,962...2,614,631
JBrowse link
G Ccbe1 collagen and calcium binding EGF domains 1 acts_upstream_of_or_within ISO MGI:5495674 (MGI:5582954|PMID:24733830) RGD PMID:24733830 MGI:5582954 NCBI chr18:61,758,754...62,013,194
Ensembl chr18:61,759,289...61,788,863
JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:120,278,605...120,367,829
Ensembl chr 2:120,278,605...120,316,600
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:22693285)
(MGI:4936771|PMID:21131974)
RGD PMID:21131974 PMID:22693285 MGI:4936771 NCBI chr10:108,055,270...108,393,408
Ensembl chr10:108,340,240...108,372,862
JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within IEP
ISO
MGI:2663631 (MGI:3771125|PMID:18213577) RGD PMID:18213577, PMID:19361631 MGI:3771125, RGD:2314526 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(MGI:83240|PMID:8798745)
MGI:2177133|MGI:2445716 (MGI:3618952|PMID:16467360)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:8798745 PMID:16467360 GO_REF:0000024 GO_REF:0000107 MGI:3618952 MGI:83240 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Cftr CF transmembrane conductance regulator IMP RGD PMID:15694001 RGD:1599597 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Chi3l1 chitinase 3 like 1 involved_in ISO
ISS
(PMID:18403759)
GO_REF:0000024
RGD
UniProt
PMID:18403759 GO_REF:0000024 NCBI chr13:51,022,844...51,030,797
Ensembl chr13:51,022,681...51,030,802
JBrowse link
G Clcn2 chloride voltage-gated channel 2 IMP RGD PMID:14711803 RGD:1358647 NCBI chr11:82,862,664...82,876,165
Ensembl chr11:83,883,879...83,897,394
JBrowse link
G Cp ceruloplasmin IEP RGD PMID:2332446 RGD:728241 NCBI chr 2:104,744,249...104,803,034
Ensembl chr 2:104,744,461...104,799,853
JBrowse link
G Crh corticotropin releasing hormone acts_upstream_of_or_within ISO MGI:1857392 (MGI:1860037|PMID:10861000) RGD PMID:10861000 MGI:1860037 NCBI chr 2:104,459,999...104,461,863
Ensembl chr 2:104,459,999...104,461,863
JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 IEP RGD PMID:10362728 RGD:633294 NCBI chr19:52,647,038...52,705,118
Ensembl chr19:52,647,070...52,705,131
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567|MGI:2148594 (MGI:2677587|PMID:12885771), (MGI:3773938|PMID:18231602) RGD PMID:12885771 PMID:18231602 MGI:2677587 MGI:3773938 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cux1 cut-like homeobox 1 acts_upstream_of_or_within ISO MGI:2388352 (MGI:2149924|PMID:11544187) RGD PMID:11544187 MGI:2149924 NCBI chr12:23,150,886...23,470,095
Ensembl chr12:23,151,180...23,445,074
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 acts_upstream_of_or_within ISO MGI:1861917 (MGI:73448|PMID:7761462) RGD PMID:7761462 MGI:73448 NCBI chr 8:62,451,360...62,458,244
Ensembl chr 8:62,451,329...62,458,301
JBrowse link
G Dhcr7 7-dehydrocholesterol reductase acts_upstream_of_or_within ISO MGI:2387406 (MGI:3056828|PMID:15005800) RGD PMID:15005800 MGI:3056828 NCBI chr 1:217,018,916...217,034,890
Ensembl chr 1:217,018,916...217,034,904
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3053959|MGI:3589209 (MGI:3617296|PMID:16452165) RGD PMID:16452165 MGI:3617296 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19944405)
Ensembl
RGD
PMID:19944405 GO_REF:0000107 NCBI chr19:52,217,427...52,245,930
Ensembl chr19:52,217,984...52,245,929
JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:20118217 RGD:5131869 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E IEP RGD PMID:18952566 RGD:2307417 NCBI chr 2:243,819,616...243,853,987
Ensembl chr 2:243,820,661...243,852,631
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 IEP RGD PMID:18952566 RGD:2307417 NCBI chr16:68,954,860...68,968,248
Ensembl chr16:68,954,875...68,968,248
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 IEP RGD PMID:15388509 RGD:2307418 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
G Elk1 ETS transcription factor ELK1 acts_upstream_of_or_within ISO (MGI:6472092|PMID:31877385) RGD PMID:31877385 MGI:6472092 NCBI chr  X:1,287,875...1,304,822
Ensembl chr  X:1,297,099...1,304,822
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO MGI:2679374 (MGI:2677590|PMID:14517255) RGD PMID:14517255 MGI:2677590 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2663583 (MGI:2181852|PMID:12053176)
Ensembl
RGD
PMID:12053176 GO_REF:0000107 MGI:2181852 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 acts_upstream_of_or_within ISO MGI:5007620 (MGI:5005005|PMID:21503901) RGD PMID:21503901 MGI:5005005 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3511765|PMID:15576401)
RGD PMID:15576401, PMID:21873635 MGI:3511765, RGD:13792537 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647|MGI:3629660 (MGI:1101385|PMID:9428423), (MGI:1327513|PMID:9916808), (MGI:3613102|PMID:16375885), (MGI:3716020|PMID:17560563) RGD PMID:9428423 PMID:9916808 PMID:16375885 PMID:17560563 MGI:1101385 MGI:1327513 MGI:3613102 MGI:3716020 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179607 (MGI:3051435|PMID:15336546)
Ensembl
RGD
PMID:15336546 GO_REF:0000107 MGI:3051435 NCBI chr10:18,047,109...18,082,290
Ensembl chr10:18,047,109...18,063,391
JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:98297 (MGI:3511765|PMID:15576401), (MGI:3701403|PMID:17187775)
RGD PMID:15576401 PMID:17187775, PMID:21873635 MGI:3511765 MGI:3701403, RGD:13792537 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgf7 fibroblast growth factor 7 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:11316745, PMID:21873635 RGD:68696, RGD:13792537 NCBI chr 3:118,315,859...118,368,464
Ensembl chr 3:118,317,761...118,366,872
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (MGI:1340887|PMID:10411502) RGD PMID:10411502 MGI:1340887 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2135961 (MGI:2135653|PMID:11493531), (MGI:3621094|PMID:16540513)
RGD PMID:11493531 PMID:16540513, PMID:21873635 MGI:2135653 MGI:3621094, RGD:13792537 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95523 (MGI:3511765|PMID:15576401), (MGI:3621094|PMID:16540513) RGD PMID:15576401 PMID:16540513 MGI:3511765 MGI:3621094 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153799|MGI:95522 (MGI:1346744|PMID:10518547), (MGI:3621094|PMID:16540513) RGD PMID:10518547 PMID:16540513 MGI:1346744 MGI:3621094 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (MGI:3511765|PMID:15576401) RGD PMID:15576401 MGI:3511765 NCBI chr17:9,990,072...10,004,339
Ensembl chr17:9,990,078...10,004,321
JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO MGI:1347476 (MGI:3579763|PMID:15668254) RGD PMID:15668254 MGI:3579763 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347472 (MGI:3579763|PMID:15668254) RGD PMID:15668254 MGI:3579763 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Foxf1 forkhead box F1 involved_in
acts_upstream_of_or_within
ISO (PMID:19500772)
MGI:1929432|MGI:2179135 (MGI:2135612|PMID:11493558), (MGI:2137114|PMID:11437453)
RGD PMID:11437453 PMID:11493558 PMID:19500772 MGI:2135612 MGI:2137114 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:2148705 (MGI:3710027|PMID:17428829) RGD PMID:17428829 MGI:3710027 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:1914004 (MGI:3710027|PMID:17428829) RGD PMID:17428829 MGI:3710027 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
JBrowse link
G Fstl3 follistatin like 3 IEP RGD PMID:14692692 RGD:1302294 NCBI chr 7:12,806,031...12,810,556
Ensembl chr 7:12,804,919...12,810,570
JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (MGI:1354188|PMID:10725236) RGD PMID:10725236 MGI:1354188 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509|MGI:95727 (MGI:1277743|PMID:9731531), (MGI:1354188|PMID:10725236) RGD PMID:9731531 PMID:10725236 MGI:1277743 MGI:1354188 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:98297 (MGI:1095776|PMID:9268579), (MGI:3051935|PMID:15136151) RGD PMID:9268579 PMID:15136151 MGI:1095776 MGI:3051935 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2159356 (MGI:2156986|PMID:10402475)
Ensembl
RGD
PMID:10402475 GO_REF:0000107 MGI:2156986 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:3838392 (MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:3837878 NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2149672 (MGI:1888698|PMID:10952889)
Ensembl
RGD
PMID:10952889 GO_REF:0000107 MGI:1888698 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hikeshi heat shock protein nuclear import factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2449650 (MGI:3614242|PMID:16157679)
Ensembl
RGD
PMID:16157679 GO_REF:0000107 MGI:3614242 NCBI chr 1:154,147,098...154,170,429
Ensembl chr 1:154,142,836...154,170,409
JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within ISO MGI:3530901 (MGI:1339514|PMID:10391216) RGD PMID:10391216 MGI:1339514 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:7911291 RGD:2326221 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IEP RGD PMID:9457472 RGD:10045983 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IEP RGD PMID:9761751 RGD:9685418 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:16488668 RGD:10002779 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:3723623 (MGI:3723390|PMID:17417799) RGD PMID:17417799 MGI:3723390 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO MGI:1333879 (MGI:2675181|PMID:12777251) RGD PMID:12777251 MGI:2675181 NCBI chr 1:261,989,178...262,015,282
Ensembl chr 1:261,989,178...262,015,153
JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 acts_upstream_of_or_within ISO MGI:2385796 (MGI:2446008|PMID:12439781) RGD PMID:12439781 MGI:2446008 NCBI chr13:111,946,626...111,996,536
Ensembl chr13:111,926,442...111,972,603
JBrowse link
G Hspb11 heat shock protein family B (small), member 11 acts_upstream_of_or_within ISO MGI:4432759|MGI:5426875 (MGI:5426280|PMID:22595669) RGD PMID:22595669 MGI:5426280 NCBI chr 5:126,856,128...126,882,913
Ensembl chr 5:126,856,705...126,882,909
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:3823090 (MGI:3821634|PMID:19036983) RGD PMID:19036983 MGI:3821634 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO MGI:96787 (MGI:3640953|PMID:16691571) RGD PMID:16691571 MGI:3640953 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18952566 RGD:2307417 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Itga3 integrin subunit alpha 3 involved_in ISO (PMID:24621570) RGD PMID:24621570 NCBI chr10:82,855,841...82,887,755
Ensembl chr10:82,855,613...82,887,497
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase acts_upstream_of_or_within ISO MGI:2686850|MGI:3580706 (MGI:2682078|PMID:14645847), (MGI:3580691|PMID:15345036) RGD PMID:14645847 PMID:15345036 MGI:2682078 MGI:3580691 NCBI chr10:105,781,752...105,787,803
Ensembl chr10:105,781,753...105,787,803
JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within ISO (MGI:3613102|PMID:16375885) RGD PMID:16375885 MGI:3613102 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lama5 laminin subunit alpha 5 acts_upstream_of_or_within ISO MGI:1934917 (MGI:2181263|PMID:12051813) RGD PMID:12051813 MGI:2181263 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lhx3 LIM homeobox 3 IEP RGD PMID:16798779 RGD:1600300 NCBI chr 3:3,653,861...3,662,509
Ensembl chr 3:3,654,755...3,661,810
JBrowse link
G Lif LIF, interleukin 6 family cytokine acts_upstream_of_or_within ISO MGI:96432 (MGI:3640953|PMID:16691571) RGD PMID:16691571 MGI:3640953 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2451080 (MGI:3603471|PMID:14644759)
Ensembl
RGD
PMID:14644759 GO_REF:0000107 MGI:3603471 NCBI chr 1:252,816,536...252,959,348
Ensembl chr 1:252,816,527...252,849,904
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO MGI:3610732 (MGI:3604822|PMID:16192629) RGD PMID:16192629 MGI:3604822 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in ISO (MGI:5825408|PMID:27645581) RGD PMID:27645581 MGI:5825408 NCBI chr 4:113,866,782...113,883,713
Ensembl chr 4:113,866,804...113,883,477
JBrowse link
G Mgp matrix Gla protein IMP RGD PMID:15136295 RGD:1582506 NCBI chr 4:170,856,783...170,860,105
Ensembl chr 4:170,856,751...170,860,225
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:100,179,879...100,179,962
Ensembl chr15:100,179,879...100,179,962
JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:100,180,015...100,180,110
Ensembl chr15:100,180,015...100,180,110
JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3619065|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:100,180,162...100,180,243
Ensembl chr15:100,180,162...100,180,243
JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:100,180,464...100,180,550
Ensembl chr15:100,180,464...100,180,550
JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO MGI:2676844|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:100,180,334...100,180,418
Ensembl chr15:100,180,334...100,180,418
JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917 (MGI:3789916|PMID:18329372) RGD PMID:18329372 MGI:3789916 NCBI chr15:100,180,586...100,180,663
Ensembl chr15:100,180,586...100,180,663
JBrowse link
G Mme membrane metallo-endopeptidase IEP RGD PMID:1547865 RGD:13801036 NCBI chr 2:153,799,203...153,880,910
Ensembl chr 2:153,803,349...153,880,738
JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO MGI:2386246 (MGI:3527919|PMID:15572153) RGD PMID:15572153 MGI:3527919 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388717|MGI:3574949 (MGI:3574742|PMID:15716345)
Ensembl
RGD
PMID:15716345 GO_REF:0000107 MGI:3574742 NCBI chr 6:38,222,554...38,228,419
Ensembl chr 6:38,222,555...38,228,379
JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within ISO MGI:2178748|MGI:3530139 (MGI:2177381|PMID:11850179), (MGI:3528545|PMID:15632069) RGD PMID:11850179 PMID:15632069 MGI:2177381 MGI:3528545 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15494458), (PMID:16960125)
MGI:1857494|MGI:2677488|MGI:3619325|MGI:3619326|MGI:3619327|MGI:3619328|MGI:3619373 (MGI:1352993|PMID:10706142), (MGI:2675174|PMID:12829717), (MGI:4950308|PMID:21350014)
RGD PMID:10706142 PMID:12829717 PMID:15494458 PMID:16960125 PMID:21350014 MGI:1352993 MGI:2675174 MGI:4950308 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Nkx2-8 NK2 homeobox 8 acts_upstream_of_or_within ISO MGI:3692933 (MGI:3691961|PMID:17079460) RGD PMID:17079460 MGI:3691961 NCBI chr 6:77,506,882...77,508,585
Ensembl chr 6:77,506,882...77,508,585
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857229 (MGI:3580728|PMID:15016731)
Ensembl
RGD
PMID:15016731 GO_REF:0000107 MGI:3580728 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:3529381|PMID:15064243) RGD PMID:15064243 MGI:3529381 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:112,526,553...112,575,745
Ensembl chr 8:112,526,553...112,575,745
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IEP RGD PMID:16371448 RGD:4892096 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 acts_upstream_of_or_within ISO MGI:6110171 (MGI:5913140|PMID:27486780) RGD PMID:27486780 MGI:5913140 NCBI chr10:88,459,490...88,488,237
Ensembl chr10:88,459,490...88,488,237
JBrowse link
G Pde4d phosphodiesterase 4D IEP RGD PMID:20652950 RGD:7327159 NCBI chr 2:40,219,999...41,468,551
Ensembl chr 2:40,554,146...41,464,264
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926728 (MGI:3622881|PMID:11803579)
Ensembl
RGD
PMID:11803579 GO_REF:0000107 MGI:3622881 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pdpn podoplanin acts_upstream_of_or_within
involved_in
IEP
ISO
ISS
IBA
MGI:2657021 (MGI:2654393|PMID:12654292)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:12654292, PMID:8652186, PMID:21873635 GO_REF:0000024 MGI:2654393, RGD:2292371, RGD:13792537 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked IEP RGD PMID:11064151 RGD:11556272 NCBI chr  X:40,460,047...40,717,982
Ensembl chr  X:40,460,047...40,717,982
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857844|MGI:1857846|MGI:1857880|MGI:2136268|MGI:2384494 (MGI:1344731|PMID:10498698), (MGI:1345532|PMID:10499586), (MGI:1347482|PMID:10572050), (MGI:3773938|PMID:18231602) RGD PMID:10498698 PMID:10499586 PMID:10572050 PMID:18231602 MGI:1344731 MGI:1345532 MGI:1347482 MGI:3773938 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:3039057|PMID:15042703) RGD PMID:15042703 MGI:3039057 NCBI chr 1:219,439,953...219,443,570
Ensembl chr 1:219,439,953...219,443,570
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) RGD PMID:8812486 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:2270483 RGD:9831441 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within ISO MGI:3762127 (MGI:3762126|PMID:11359932) RGD PMID:11359932 MGI:3762126 NCBI chr16:20,435,098...20,439,206
Ensembl chr16:20,435,101...20,439,206
JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) RGD PMID:15994349 MGI:3604178 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711
JBrowse link
G Rida reactive intermediate imine deaminase A homolog IEP RGD PMID:12798936 RGD:9685563 NCBI chr 7:73,256,506...73,270,308
Ensembl chr 7:73,256,508...73,270,308
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857796|MGI:1934261|MGI:1934268|MGI:2679524|MGI:95729 (MGI:1277744|PMID:9731532), (MGI:1289788|PMID:9768363), (MGI:3050270|PMID:15305287), (MGI:3051935|PMID:15136151), (MGI:3701403|PMID:17187775)
UniProt
RGD
PMID:9731532 PMID:9768363 PMID:15136151 PMID:15305287 PMID:17187775 GO_REF:0000024 MGI:1277744 MGI:1289788 MGI:3050270 MGI:3051935 MGI:3701403 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sim2 SIM bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2180881 (MGI:2180275|PMID:12024028) RGD PMID:12024028 MGI:2180275 NCBI chr11:34,315,739...34,355,183
Ensembl chr11:34,316,295...34,354,027
JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:2178849|PMID:11984597)
Ensembl
RGD
PMID:11984597 GO_REF:0000107 MGI:2178849 NCBI chr18:28,413,910...28,428,133
Ensembl chr18:28,414,009...28,428,117
JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:87912 (MGI:3758991|PMID:17849440) RGD PMID:17849440 MGI:3758991 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO MGI:1856877 (MGI:5469952|PMID:22945695) RGD PMID:22945695 MGI:5469952 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692
JBrowse link
G Sparc secreted protein acidic and cysteine rich IMP RGD PMID:7654384 RGD:2300073 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO (MGI:1331548|PMID:10074434) RGD PMID:10074434 MGI:1331548 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 IEP RGD PMID:12896875 RGD:1304415 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Srebf1_v2 sterol regulatory element binding factor 1, variant 2 IEP RGD PMID:12896875 RGD:1304415
G Stk40 serine/threonine kinase 40 acts_upstream_of_or_within ISO MGI:5496282 (MGI:5486391|PMID:23293024) RGD PMID:23293024 MGI:5486391 NCBI chr 5:144,112,612...144,150,653
Ensembl chr 5:144,114,012...144,150,647
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 acts_upstream_of_or_within ISO MGI:2667182 (MGI:2447107|PMID:12464436) RGD PMID:12464436 MGI:2447107 NCBI chr 7:121,350,953...121,382,100
Ensembl chr 7:121,350,965...121,382,088
JBrowse link
G Tbx4 T-box transcription factor 4 acts_upstream_of_or_within ISO (MGI:2448119|PMID:12508227) RGD PMID:12508227 MGI:2448119 NCBI chr10:73,331,864...73,362,784
Ensembl chr10:73,333,119...73,362,783
JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2448119|PMID:12508227)
Ensembl
RGD
PMID:12508227 GO_REF:0000107 MGI:2448119 NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
JBrowse link
G Tgfb1 transforming growth factor, beta 1 TAS RGD PMID:7852342 RGD:70296 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 TAS RGD PMID:7852342 RGD:70296 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfb3 transforming growth factor, beta 3 NAS RGD PMID:7852342 RGD:70296 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 IEP RGD PMID:10835329 RGD:2302034 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within IEP
ISO
MGI:2384513 (MGI:3829327|PMID:18990706) RGD PMID:18990706, PMID:7573476 MGI:3829327, RGD:1601625 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Thra thyroid hormone receptor alpha IEP RGD PMID:17496154 RGD:2314319 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
G Thra_v1 thyroid hormone receptor alpha, variant 1 IEP RGD PMID:17496154 RGD:2314319
G Thra_v2 thyroid hormone receptor alpha, variant 2 IEP RGD PMID:17496154 RGD:2314319
G Timeless timeless circadian regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2675515|PMID:12950082)
Ensembl
RGD
PMID:12950082 GO_REF:0000107 MGI:2675515 NCBI chr 7:2,643,288...2,667,329
Ensembl chr 7:2,643,288...2,667,628
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 IEP RGD PMID:10198159 RGD:2291962 NCBI chr 7:141,039,433...141,070,269
Ensembl chr 7:141,034,982...141,069,989
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO MGI:4124060 (MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:5300435 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:3806378 NCBI chr 1:92,703,180...92,775,020
Ensembl chr 1:92,703,080...92,774,975
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931047 (MGI:2181852|PMID:12053176), (MGI:3583398|PMID:15927453)
(MGI:3613102|PMID:16375885)
RGD PMID:12053176 PMID:15927453 PMID:16375885 MGI:2181852 MGI:3583398 MGI:3613102 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt2 Wnt family member 2 IEP RGD PMID:1377452 RGD:2314905 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857617 (MGI:2384338|PMID:12142021)
Ensembl
RGD
PMID:12142021 GO_REF:0000107 MGI:2384338 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (MGI:3788975|PMID:18343501) RGD PMID:18343501 MGI:3788975 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta involved_in IEA
ISO
GO_REF:0000107
(MGI:6109167|PMID:29118970)
Ensembl
RGD
PMID:29118970 GO_REF:0000107 MGI:6109167 NCBI chr 7:75,573,553...75,598,295
Ensembl chr 7:75,574,967...75,597,276
JBrowse link
G Zfpm2 zinc finger protein, multitype 2 acts_upstream_of_or_within ISO MGI:3587413 (MGI:3586963|PMID:16103912) RGD PMID:16103912 MGI:3586963 NCBI chr 7:79,471,277...79,964,405
Ensembl chr 7:79,638,046...79,964,405
JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:140,875,191...140,888,344
Ensembl chr  X:140,878,216...140,888,795
JBrowse link
lung epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:107423|MGI:1917942|MGI:1923373|MGI:2443665 (MGI:4950299|PMID:21385765) RGD PMID:21385765 MGI:4950299 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1347476 (MGI:3579763|PMID:15668254)
Ensembl
RGD
PMID:15668254 GO_REF:0000107 MGI:3579763 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347472 (MGI:3579763|PMID:15668254) RGD PMID:15668254 MGI:3579763 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Gpsm2 G-protein signaling modulator 2 acts_upstream_of_or_within ISO (MGI:4950299|PMID:21385765) RGD PMID:21385765 MGI:4950299 NCBI chr 2:211,480,120...211,528,096
Ensembl chr 2:211,480,400...211,527,919
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (MGI:5613464|PMID:22955271) RGD PMID:22955271 MGI:5613464 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Insc INSC, spindle orientation adaptor protein acts_upstream_of_or_within ISO (MGI:4950299|PMID:21385765) RGD PMID:21385765 MGI:4950299 NCBI chr 1:184,299,200...184,407,487
Ensembl chr 1:184,299,250...184,407,480
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 acts_upstream_of_or_within ISO (MGI:4950299|PMID:21385765) RGD PMID:21385765 MGI:4950299 NCBI chr 1:167,044,544...167,091,453
Ensembl chr 1:167,051,209...167,091,453
JBrowse link
G Numb NUMB, endocytic adaptor protein acts_upstream_of_or_within ISO (MGI:4950299|PMID:21385765) RGD PMID:21385765 MGI:4950299 NCBI chr 6:107,279,917...107,325,345
Ensembl chr 6:107,279,920...107,325,345
JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha acts_upstream_of_or_within ISO MGI:3044031 (MGI:3689244|PMID:16998587) RGD PMID:16998587 MGI:3689244 NCBI chr14:100,311,224...100,360,879
Ensembl chr14:100,311,173...100,360,879
JBrowse link
G Sav1 salvador family WW domain containing protein 1 acts_upstream_of_or_within ISO MGI:3790763 (MGI:3785211|PMID:18369314) RGD PMID:18369314 MGI:3785211 NCBI chr 6:92,376,470...92,398,678
Ensembl chr 6:92,376,093...92,398,525
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:5523731|PMID:24191021) RGD PMID:24191021 MGI:5523731 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:3716065 (MGI:3850579|PMID:19515693) RGD PMID:19515693 MGI:3850579 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO MGI:3053959|MGI:5316446 (MGI:5586932|PMID:25043473) RGD PMID:25043473 MGI:5586932 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
lung epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO MGI:4999627 (MGI:4950818|PMID:21408140) RGD PMID:21408140 MGI:4950818 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366137|PMID:19710174)
UniProt
RGD
PMID:19710174 GO_REF:0000024 MGI:4366137 NCBI chr 5:167,951,564...167,966,011
Ensembl chr 5:167,952,728...167,966,009
JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (PMID:9530170) RGD PMID:9530170 NCBI chr10:105,282,090...105,289,396 JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:1858043 (MGI:5638831|PMID:24661562) RGD PMID:24661562 MGI:5638831 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) RGD PMID:11891195 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Rcn3 reticulocalbin 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6201885|PMID:26252542)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26252542 GO_REF:0000024 GO_REF:0000107 MGI:6201885 NCBI chr 1:101,076,971...101,086,198
Ensembl chr 1:101,076,898...101,086,198
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl
RGD
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (MGI:3788965|PMID:18367557) RGD PMID:18367557 MGI:3788965 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agr2 anterior gradient 2, protein disulphide isomerase family member acts_upstream_of_or_within ISO (MGI:5429471|PMID:22675208) RGD PMID:22675208 MGI:5429471 NCBI chr 6:55,465,782...55,487,087
Ensembl chr 6:55,465,782...55,487,714
JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (MGI:3665532|PMID:17003488) RGD PMID:17003488 MGI:3665532 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
G Spdef SAM pointed domain containing ets transcription factor acts_upstream_of_or_within ISO (MGI:3709719|PMID:17347682) RGD PMID:17347682 MGI:3709719 NCBI chr20:7,292,823...7,308,053
Ensembl chr20:7,292,824...7,307,284
JBrowse link
lung growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggcx gamma-glutamyl carboxylase IEP RGD PMID:2717270 RGD:11040517 NCBI chr 4:100,277,345...100,293,097
Ensembl chr 4:100,277,391...100,293,250
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IMP RGD PMID:8879189 RGD:11087558 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta IMP RGD PMID:8879189 RGD:11087558 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:3045965 (MGI:3774879|PMID:18256198) RGD PMID:18256198 MGI:3774879 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO (MGI:1934408|PMID:11287183) RGD PMID:11287183 MGI:1934408 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567|MGI:2148569 (MGI:4360856|PMID:19686689), (MGI:4361775|PMID:19805295)
Ensembl
RGD
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO MGI:1261834 (MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:4360856 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO MGI:98954 (MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:4360856 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
lung lobe development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEP RGD PMID:15991191 RGD:8916959 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
lung lobe formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2386764 (MGI:3784878|PMID:17142311) RGD PMID:17142311 MGI:3784878 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
lung lobe morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3629660 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4942413 (MGI:4943100|PMID:21377456) RGD PMID:21377456 MGI:4943100 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO MGI:1926485|MGI:96787 (MGI:3640953|PMID:16691571) RGD PMID:16691571 MGI:3640953 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96432 (MGI:3640953|PMID:16691571)
Ensembl
RGD
PMID:16691571 GO_REF:0000107 MGI:3640953 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl
RGD
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513 (MGI:3829327|PMID:18990706) RGD PMID:18990706 MGI:3829327 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO MGI:2177763 (MGI:2675181|PMID:12777251) RGD PMID:12777251 MGI:2675181 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (MGI:3686561|PMID:16937369) RGD PMID:16937369 MGI:3686561 NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647|MGI:3629660 (MGI:3578606|PMID:15800000) RGD PMID:15800000 MGI:3578606 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (MGI:1340887|PMID:10411502) RGD PMID:10411502 MGI:1340887 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO MGI:2653543 (MGI:3613241|PMID:16214823) RGD PMID:16214823 MGI:3613241 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO MGI:1333879 (MGI:2675181|PMID:12777251) RGD PMID:12777251 MGI:2675181 NCBI chr 1:261,989,178...262,015,282
Ensembl chr 1:261,989,178...262,015,153
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO MGI:2679939 (MGI:3759000|PMID:17717145) RGD PMID:17717145 MGI:3759000 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 acts_upstream_of_or_within ISO MGI:1346867 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 acts_upstream_of_or_within ISO MGI:1346866 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr 7:11,458,971...11,478,520
Ensembl chr 7:11,458,967...11,478,489
JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO MGI:1346859 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within ISO MGI:3527900 (MGI:3796918|PMID:18324732) RGD PMID:18324732 MGI:3796918 NCBI chr10:14,259,394...14,299,276
Ensembl chr10:14,260,787...14,299,167
JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1862000 (MGI:3640733|PMID:16712836)
Ensembl
RGD
PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO MGI:3620603 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982
JBrowse link
G Rpl13a ribosomal protein L13A acts_upstream_of_or_within ISO MGI:5502322 (MGI:5475059|PMID:23460747) RGD PMID:23460747 MGI:5475059 NCBI chr 1:101,120,325...101,123,401
Ensembl chr 1:101,120,325...101,123,402
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:1346236|PMID:10500184) RGD PMID:10500184 MGI:1346236 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:3052265|PMID:15254231)
UniProt
RGD
PMID:15254231 GO_REF:0000024 MGI:3052265 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO (MGI:1934408|PMID:11287183) RGD PMID:11287183 MGI:1934408 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Stk40 serine/threonine kinase 40 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5496282 (MGI:5486391|PMID:23293024)
Ensembl
RGD
PMID:23293024 GO_REF:0000107 MGI:5486391 NCBI chr 5:144,112,612...144,150,653
Ensembl chr 5:144,114,012...144,150,647
JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:10572052 GO_REF:0000024 MGI:1347485 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513 (MGI:3829327|PMID:18990706) RGD PMID:18990706 MGI:3829327 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (MGI:3788965|PMID:18367557) RGD PMID:18367557 MGI:3788965 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
lung neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3664178|PMID:9126746) RGD PMID:9126746 MGI:3664178 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
lung proximal/distal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO (MGI:3577664|PMID:15531758) RGD PMID:15531758 MGI:3577664 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
lung saccule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 acts_upstream_of_or_within ISO MGI:4431878 (MGI:5585348|PMID:24860998) RGD PMID:24860998 MGI:5585348 NCBI chr 3:148,832,231...148,902,356
Ensembl chr 3:148,837,814...148,900,452
JBrowse link
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO MGI:4999627 (MGI:4950818|PMID:21408140) RGD PMID:21408140 MGI:4950818 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO (PMID:17071719) RGD PMID:17071719 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108067 (MGI:3695537|PMID:17164424)
Ensembl
RGD
PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within ISO MGI:2180017 (MGI:3584290|PMID:16049328) RGD PMID:16049328 MGI:3584290 NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107516 (MGI:3695537|PMID:17164424)
Ensembl
RGD
PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Ptges3 prostaglandin E synthase 3 acts_upstream_of_or_within ISO MGI:3701300 (MGI:3714109|PMID:17438133) RGD PMID:17438133 MGI:3714109 NCBI chr 7:2,479,267...2,497,024
Ensembl chr 7:2,479,311...2,497,013
JBrowse link
lung secretory cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:1921373 (MGI:5429471|PMID:22675208) RGD PMID:22675208 MGI:5429471 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Foxp4 forkhead box P4 acts_upstream_of_or_within ISO MGI:1914004 (MGI:5429471|PMID:22675208) RGD PMID:22675208 MGI:5429471 NCBI chr 9:15,068,378...15,124,962
Ensembl chr 9:15,068,399...15,125,318
JBrowse link
lung smooth muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2429649 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
lung vasculature development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4366137|PMID:19710174)
UniProt
RGD
PMID:19710174 GO_REF:0000024 MGI:4366137 NCBI chr 5:167,951,564...167,966,011
Ensembl chr 5:167,952,728...167,966,009
JBrowse link
G Foxf1 forkhead box F1 involved_in ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO MGI:2679939 (MGI:3759000|PMID:17717145) RGD PMID:17717145 MGI:3759000 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:3823090 (MGI:3821634|PMID:19036983) RGD PMID:19036983 MGI:3821634 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO MGI:1926485|MGI:96787 (MGI:3640953|PMID:16691571) RGD PMID:16691571 MGI:3640953 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:96432 (MGI:3640953|PMID:16691571)
Ensembl
RGD
PMID:16691571 GO_REF:0000107 MGI:3640953 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in IEA
ISO
GO_REF:0000107
(PMID:17273977)
Ensembl
RGD
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tcf21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2148207 (MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:10572052 GO_REF:0000024 MGI:1347485 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:1927039|PMID:11066091)
(MGI:1930390|PMID:11169844)
RGD PMID:11066091 PMID:11169844 MGI:1927039 MGI:1930390 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
lung-associated mesenchyme development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567 (MGI:3801531|PMID:18533146)
Ensembl
RGD
PMID:18533146 GO_REF:0000107 MGI:3801531 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dppa4 developmental pluripotency associated 4 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2157523|MGI:5298639 (MGI:5298147|PMID:21896782)
GO_REF:0000107
RGD
Ensembl
PMID:21896782 GO_REF:0000107 MGI:5298147 NCBI chr11:55,233,416...55,242,534
Ensembl chr11:55,234,545...55,240,241
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (MGI:3801531|PMID:18533146) RGD PMID:18533146 MGI:3801531 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95523 (MGI:3801531|PMID:18533146) RGD PMID:18533146 MGI:3801531 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3629660|MGI:95522 (MGI:3688953|PMID:16989802), (MGI:3801531|PMID:18533146) RGD PMID:16989802 PMID:18533146 MGI:3688953 MGI:3801531 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (MGI:1195049|PMID:9441679) RGD PMID:9441679 MGI:1195049 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3640803 (MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:4830023 NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl
RGD
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Wnt11 Wnt family member 11 involved_in ISO (PMID:9757009) RGD PMID:9757009 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (MGI:3788965|PMID:18367557) RGD PMID:18367557 MGI:3788965 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
mesenchymal cell differentiation involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:95523 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:1099809 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
mesenchymal cell proliferation involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567 (MGI:3696593|PMID:17128274), (MGI:3773938|PMID:18231602)
Ensembl
RGD
PMID:17128274 PMID:18231602 GO_REF:0000107 MGI:3696593 MGI:3773938 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3629660 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:85754|PMID:9006067)
Ensembl
RGD
PMID:9006067 GO_REF:0000107 MGI:85754 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
mesenchymal-epithelial cell signaling involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO (MGI:3577664|PMID:15531758) RGD PMID:15531758 MGI:3577664 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnf tumor necrosis factor involved_in ISO (PMID:17350185) RGD PMID:17350185 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:5049839|PMID:21513708)
UniProt
RGD
PMID:21513708 GO_REF:0000024 MGI:5049839 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
negative regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:1921373 (MGI:5429471|PMID:22675208) RGD PMID:22675208 MGI:5429471 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Foxp4 forkhead box P4 acts_upstream_of_or_within ISO MGI:1914004 (MGI:5429471|PMID:22675208) RGD PMID:22675208 MGI:5429471 NCBI chr 9:15,068,378...15,124,962
Ensembl chr 9:15,068,399...15,125,318
JBrowse link
negative regulation of mesenchymal cell proliferation involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:5049839|PMID:21513708)
UniProt
RGD
PMID:21513708 GO_REF:0000024 MGI:5049839 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Phf14 PHD finger protein 14 acts_upstream_of_or_within ISO MGI:5426539 (MGI:5426441|PMID:22730381) RGD PMID:22730381 MGI:5426441 NCBI chr 4:38,241,189...38,420,199
Ensembl chr 4:38,240,728...38,420,205
JBrowse link
nose development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in ISO (MGI:3042765|PMID:14623956) RGD PMID:14623956 MGI:3042765 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within
ISO (PMID:15300250)
MGI:3588650 (MGI:3611161|PMID:16207732)
RGD PMID:15300250 PMID:16207732 MGI:3611161 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Gng8 G protein subunit gamma 8 acts_upstream_of_or_within ISO MGI:5584308 (MGI:5582146|PMID:23836683) RGD PMID:23836683 MGI:5582146 NCBI chr 1:78,818,360...78,822,224
Ensembl chr 1:78,818,404...78,822,224
JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (MGI:1206234|PMID:9620767) RGD PMID:9620767 MGI:1206234 NCBI chr16:2,616,538...2,636,708
Ensembl chr16:2,634,603...2,636,708
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:3715393|PMID:17553904) RGD PMID:17553904 MGI:3715393 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:28067909), (PMID:28067911) RGD PMID:28067909 PMID:28067911 NCBI chr 9:119,675,750...119,818,620
Ensembl chr 9:119,676,628...119,818,310
JBrowse link
nose morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:2176418|PMID:11731796) RGD PMID:11731796 MGI:2176418 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
olfactory pit development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3512079 (MGI:3701419|PMID:17207476)
Ensembl
RGD
PMID:17207476 GO_REF:0000107 MGI:3701419 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:87534|PMID:9108377) RGD PMID:9108377 MGI:87534 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857789 (MGI:2449888|PMID:12533617)
Ensembl
RGD
PMID:12533617 GO_REF:0000107 MGI:2449888 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
olfactory placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou2f1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO MGI:98364 (MGI:3701404|PMID:17140559) RGD PMID:17140559 MGI:3701404 NCBI chr13:84,075,316...84,217,368
Ensembl chr13:84,083,632...84,217,366
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:3833798|PMID:19027001) RGD PMID:19027001 MGI:3833798 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:3833798|PMID:19027001) RGD PMID:19027001 MGI:3833798 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:101898 (MGI:3701404|PMID:17140559) RGD PMID:17140559 MGI:3701404 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:2668337 (MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:2668337 (MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4456940|PMID:17350185)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17350185 GO_REF:0000024 GO_REF:0000107 MGI:4456940 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148567 (MGI:3801531|PMID:18533146)
Ensembl
RGD
PMID:18533146 GO_REF:0000107 MGI:3801531 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IMP RGD PMID:8879189 RGD:11087558 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
positive regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISO (MGI:5467649|PMID:23219958) RGD PMID:23219958 MGI:5467649 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Fgf7 fibroblast growth factor 7 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:118,315,859...118,368,464
Ensembl chr 3:118,317,761...118,366,872
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3629660 (MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:1914004 (MGI:3710027|PMID:17428829) RGD PMID:17428829 MGI:3710027 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:1858043 (MGI:5638831|PMID:24661562) RGD PMID:24661562 MGI:5638831 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO MGI:4361155 (MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:4360856 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
positive regulation of lung alveolus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epas1 endothelial PAS domain protein 1 IEP RGD PMID:23962064 RGD:10395379 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
positive regulation of lung ciliated cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in ISO (PMID:20539013) RGD PMID:20539013 NCBI chr10:105,282,090...105,289,396 JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2177762 (MGI:3703395|PMID:16364283) RGD PMID:16364283 MGI:3703395 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:5523731|PMID:24191021) RGD PMID:24191021 MGI:5523731 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:5523731|PMID:24191021) RGD PMID:24191021 MGI:5523731 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:1344405|MGI:1921373 (MGI:5429471|PMID:22675208) RGD PMID:22675208 MGI:5429471 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Foxp4 forkhead box P4 acts_upstream_of_or_within ISO MGI:1344405|MGI:1914004 (MGI:5429471|PMID:22675208) RGD PMID:22675208 MGI:5429471 NCBI chr 9:15,068,378...15,124,962
Ensembl chr 9:15,068,399...15,125,318
JBrowse link
right lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1346236|PMID:10500184)
Ensembl
RGD
PMID:10500184 GO_REF:0000107 MGI:1346236 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
right lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
secretion by lung epithelial cell involved in lung growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in ISO
IBA
(PMID:10541313)
PMID:21873635
RGD PMID:10541313, PMID:21873635 RGD:13792537 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf7 fibroblast growth factor 7 involved_in ISO
IEA
(PMID:10541313)
GO_REF:0000107
RGD
Ensembl
PMID:10541313 GO_REF:0000107 NCBI chr 3:118,315,859...118,368,464
Ensembl chr 3:118,317,761...118,366,872
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:3716065 (MGI:3850579|PMID:19515693) RGD PMID:19515693 MGI:3850579 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
smoothened signaling pathway involved in lung development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5912649|PMID:28859094) RGD PMID:28859094 MGI:5912649 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
trachea cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:1857622 (MGI:1096258|PMID:9376317) RGD PMID:9376317 MGI:1096258 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:1932114|MGI:2445724 (MGI:1096258|PMID:9376317)
MGI:1931079 (MGI:60925|PMID:8388780)
RGD PMID:8388780 PMID:9376317 MGI:1096258 MGI:60925 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2429649 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:3522206 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
trachea cartilage morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (MGI:1195049|PMID:9441679) RGD PMID:9441679 MGI:1195049 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1922667 (MGI:3774879|PMID:18256198)
RGD PMID:18256198, PMID:21873635 MGI:3774879, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:1298218 (MGI:3774879|PMID:18256198) RGD PMID:18256198 MGI:3774879 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (MGI:3788965|PMID:18367557) RGD PMID:18367557 MGI:3788965 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
trachea development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano1 anoctamin 1 involved_in ISO (MGI:3805598|PMID:18585372) RGD PMID:18585372 MGI:3805598 NCBI chr 1:217,754,349...217,902,540
Ensembl chr 1:217,754,336...217,902,473
JBrowse link
G Foxf1 forkhead box F1 involved_in
acts_upstream_of_or_within
ISO (PMID:19500772)
MGI:1929432 (MGI:2135612|PMID:11493558)
RGD PMID:11493558 PMID:19500772 MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Hydin Hydin, axonemal central pair apparatus protein acts_upstream_of_or_within ISO MGI:1856913 (MGI:3793384|PMID:18250199) RGD PMID:18250199 MGI:3793384 NCBI chr19:41,036,507...41,379,634
Ensembl chr19:41,036,510...41,379,588
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:1277744|PMID:9731532) RGD PMID:9731532 MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
trachea formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3797048 (MGI:3820452|PMID:18692041)
Ensembl
RGD
PMID:18692041 GO_REF:0000107 MGI:3820452 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148569 (MGI:4361775|PMID:19805295)
Ensembl
RGD
PMID:19805295 GO_REF:0000107 MGI:4361775 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346867 (MGI:5588044|PMID:25100655)
Ensembl
RGD
PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 acts_upstream_of_or_within ISO MGI:1346866 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr 7:11,458,971...11,478,520
Ensembl chr 7:11,458,967...11,478,489
JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO MGI:1346859 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513 (MGI:3829327|PMID:18990706) RGD PMID:18990706 MGI:3829327 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
trachea gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eda ectodysplasin-A acts_upstream_of_or_within ISO MGI:1856197 (MGI:3703377|PMID:15973734) RGD PMID:15973734 MGI:3703377 NCBI chr  X:69,730,123...70,222,693
Ensembl chr  X:69,730,242...70,220,329
JBrowse link
G Edaradd EDAR-associated death domain acts_upstream_of_or_within ISO MGI:1856832 (MGI:3703377|PMID:15973734) RGD PMID:15973734 MGI:3703377 NCBI chr17:90,802,280...90,843,476
Ensembl chr17:90,802,393...90,843,485
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926601 (MGI:1345559|PMID:10498680)
Ensembl
RGD
PMID:10498680 GO_REF:0000107 MGI:1345559 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
trachea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567 (MGI:3773938|PMID:18231602), (MGI:3820452|PMID:18692041) RGD PMID:18231602 PMID:18692041 MGI:3773938 MGI:3820452 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within ISO MGI:2150397 (MGI:1195049|PMID:9441679), (MGI:3606710|PMID:15295088) RGD PMID:9441679 PMID:15295088 MGI:1195049 MGI:3606710 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl
RGD
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513 (MGI:3829327|PMID:18990706) RGD PMID:18990706 MGI:3829327 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
type I pneumocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO MGI:4999627 (MGI:4950818|PMID:21408140) RGD PMID:21408140 MGI:4950818 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO MGI:1926485 (MGI:3640953|PMID:16691571) RGD PMID:16691571 MGI:3640953 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Klf2 Kruppel-like factor 2 acts_upstream_of_or_within ISO (MGI:5297307|PMID:22001906) RGD PMID:22001906 MGI:5297307 NCBI chr16:19,223,087...19,225,037
Ensembl chr16:19,223,087...19,225,037
JBrowse link
G Lta4h leukotriene A4 hydrolase IEP RGD PMID:15805137 RGD:2316585 NCBI chr 7:34,288,333...34,320,243
Ensembl chr 7:34,288,365...34,320,235
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within ISO MGI:3829987|MGI:98742|MGI:98743 (MGI:5297307|PMID:22001906) RGD PMID:22001906 MGI:5297307 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:5049839|PMID:21513708)
UniProt
RGD
PMID:21513708 GO_REF:0000024 MGI:5049839 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Thra thyroid hormone receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1337080|MGI:98743 (MGI:5297307|PMID:22001906)
Ensembl
RGD
PMID:22001906 GO_REF:0000107 MGI:5297307 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
G Thrb thyroid hormone receptor beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1337080|MGI:98742 (MGI:5297307|PMID:22001906)
Ensembl
RGD
PMID:22001906 GO_REF:0000107 MGI:5297307 NCBI chr15:8,890,578...9,239,815
Ensembl chr15:8,890,578...9,086,282
JBrowse link
type II pneumocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aimp2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 acts_upstream_of_or_within ISO MGI:3497919 (MGI:2665161|PMID:12819782) RGD PMID:12819782 MGI:2665161 NCBI chr12:12,738,784...12,748,345
Ensembl chr12:12,738,812...12,748,345
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO (MGI:3577664|PMID:15531758) RGD PMID:15531758 MGI:3577664 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fndc3b fibronectin type III domain containing 3B acts_upstream_of_or_within ISO MGI:4822558 (MGI:5298325|PMID:21704616) RGD PMID:21704616 MGI:5298325 NCBI chr 2:113,109,949...113,415,171
Ensembl chr 2:113,112,902...113,345,577
JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108067 (MGI:3695537|PMID:17164424)
Ensembl
RGD
PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO MGI:1926485 (MGI:3640953|PMID:16691571) RGD PMID:16691571 MGI:3640953 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:5049839|PMID:21513708)
UniProt
RGD
PMID:21513708 GO_REF:0000024 MGI:5049839 NCBI chr 5:100,436,343...100,647,962
Ensembl chr 5:100,439,082...100,647,727
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107516 (MGI:3695537|PMID:17164424)
Ensembl
RGD
PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    multicellular organismal process 8912
      multicellular organism development 5734
        system development 5280
          respiratory system development 297
            bronchus development + 12
            diaphragm development + 11
            larynx development + 3
            lung development + 262
            nose development + 15
            open tracheal system development + 0
            trachea development + 22
Path 2
Term Annotations click to browse term
  biological_process 19638
    developmental process 6777
      anatomical structure development 6250
        multicellular organism development 5734
          system development 5280
            respiratory system development 297
              bronchus development + 12
              diaphragm development + 11
              larynx development + 3
              lung development + 262
              nose development + 15
              open tracheal system development + 0
              trachea development + 22
paths to the root