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ONTOLOGY REPORT - ANNOTATIONS


Term:skeletal muscle organ development
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Accession:GO:0060538 term browser browse the term
Definition:The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue.


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skeletal muscle organ development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTFR ciliary neurotrophic factor receptor acts_upstream_of_or_within ISO (MGI:1352080|PMID:10526311) MGI PMID:10526311 MGI:1352080 NCBI chr 9:34,387,929...34,426,907
Ensembl chr 9:35,197,474...35,214,977
JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in ISO (PMID:30770808)
(MGI:6287080|PMID:30770808)
UniProt PMID:30770808 MGI:6287080 NCBI chr 3:177,948,040...178,012,705 JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 involved_in ISO (MGI:5547845|PMID:24132234) UniProt PMID:24132234 MGI:5547845 NCBI chr22:14,077,463...14,929,250 JBrowse link
G MYMX myomixer, myoblast fusion factor involved_in ISO (MGI:5903126|PMID:28569755), (MGI:5903127|PMID:28569745), (MGI:5904374|PMID:28386024) UniProt PMID:28386024 PMID:28569745 PMID:28569755 MGI:5903126 MGI:5903127 MGI:5904374 NCBI chr 6:43,812,606...43,814,252
Ensembl chr 6:45,097,114...45,097,368
JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (MGI:5568003|PMID:24443808) MGI PMID:24443808 MGI:5568003 NCBI chr2B:109,441,938...109,541,449
Ensembl chr2B:228,022,453...228,121,874
JBrowse link
branchiomeric skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSC musculin involved_in ISO (MGI:3653784|PMID:12493912) UniProt PMID:12493912 MGI:3653784 NCBI chr 8:68,365,708...68,368,628 JBrowse link
G PITX1 paired like homeodomain 1 acts_upstream_of_or_within ISO (MGI:3706272|PMID:17384148) MGI PMID:17384148 MGI:3706272 NCBI chr 5:130,422,920...130,429,828
Ensembl chr 5:136,565,285...136,570,350
JBrowse link
G TCF21 transcription factor 21 involved_in ISO (MGI:3653784|PMID:12493912) UniProt PMID:12493912 MGI:3653784 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294
JBrowse link
diaphragm development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase ISO RGD PMID:9618389 RGD:4139909 NCBI chr 7:59,971,529...59,988,722
Ensembl chr 7:73,142,842...73,157,472
JBrowse link
G ASS1 argininosuccinate synthase 1 ISO RGD PMID:9618389 RGD:4139909 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
G DISP1 dispatched RND transporter family member 1 involved_in ISO (PMID:20799323) UniProt PMID:20799323 NCBI chr 1:198,488,047...198,679,013
Ensembl chr 1:203,628,338...203,692,218
JBrowse link
G FGFRL1 fibroblast growth factor receptor like 1 acts_upstream_of_or_within ISO (MGI:3771403|PMID:17986259) MGI PMID:17986259 MGI:3771403 NCBI chr 4:1,125,623...1,142,884
Ensembl chr 4:1,045,583...1,059,936
JBrowse link
G KCNAB1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ISO RGD PMID:12652645 RGD:9743957 NCBI chr 3:153,175,465...153,594,375
Ensembl chr 3:161,402,134...161,651,524
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (MGI:1344237|PMID:10482234) MGI PMID:10482234 MGI:1344237 NCBI chr 7:148,622,701...148,628,532 JBrowse link
G MSC musculin involved_in ISO (MGI:3653784|PMID:12493912) UniProt PMID:12493912 MGI:3653784 NCBI chr 8:68,365,708...68,368,628 JBrowse link
G MYT1 myelin transcription factor 1 acts_upstream_of_or_within ISO (MGI:3763794|PMID:17928203) MGI PMID:17928203 MGI:3763794 Ensembl chr20:62,108,924...62,151,936 JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) DFLAT PMID:17273977 NCBI chr15:53,117,891...53,150,790
Ensembl chr15:72,741,482...72,770,876
JBrowse link
G TCF21 transcription factor 21 involved_in ISO (MGI:3653784|PMID:12493912) UniProt PMID:12493912 MGI:3653784 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294
JBrowse link
G WT1 WT1 transcription factor involved_in ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249
JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1S calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:3613415|PMID:14618389) MGI PMID:14618389 MGI:3613415 NCBI chr 1:176,639,189...176,712,171
Ensembl chr 1:180,941,836...181,014,823
JBrowse link
G FOXL2 forkhead box L2 involved_in ISO (PMID:12630957) UniProt PMID:12630957 NCBI chr 3:135,968,040...135,980,063 JBrowse link
G MYH15 myosin heavy chain 15 ISO RGD PMID:19948655 RGD:2317122 NCBI chr 3:105,498,196...105,635,979
Ensembl chr 3:112,432,417...112,586,559
JBrowse link
G MYOM1 myomesin 1 ISO RGD PMID:12878677 RGD:633368 NCBI chr18:11,057,733...11,215,998
Ensembl chr18:13,368,052...13,523,834
JBrowse link
G MYOM2 myomesin 2 ISO RGD PMID:12878677 RGD:633368 NCBI chr 8:5,189,688...5,319,538
Ensembl chr 8:1,924,661...2,057,695
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:4881620|PMID:21035439)
(MGI:3624183|PMID:16638982)
MGI PMID:16638982 PMID:21035439 MGI:3624183 MGI:4881620 NCBI chr 4:103,112,624...103,137,356 JBrowse link
negative regulation of satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKIRIN1 akirin 1 involved_in ISO (MGI:6201977|PMID:18255059) UniProt PMID:18255059 MGI:6201977 NCBI chr 1:38,269,096...38,283,920
Ensembl chr 1:39,616,036...39,629,300
JBrowse link
G EPHB1 EPH receptor B1 involved_in ISO (MGI:5897527|PMID:27446912) UniProt PMID:27446912 MGI:5897527 NCBI chr 3:131,841,459...132,309,082
Ensembl chr 3:139,313,387...139,776,802
JBrowse link
G SIX4 SIX homeobox 4 involved_in ISO (MGI:4836102|PMID:20696153) UniProt PMID:20696153 MGI:4836102 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
negative regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100984344 calpain-3 acts_upstream_of_or_within ISO (MGI:5476405|PMID:23300487) MGI PMID:23300487 MGI:5476405 NCBI chr15:21,227,371...21,372,406
Ensembl chr15:39,476,302...39,528,820
JBrowse link
G MYOCD myocardin involved_in ISO (PMID:18451334) BHF-UCL PMID:18451334 NCBI chr17:38,880,120...38,983,246
Ensembl chr17:43,584,259...43,681,659
JBrowse link
G S100B S100 calcium binding protein B ISO RGD PMID:20069545 RGD:5508829 NCBI chr21:33,063,845...33,070,073
Ensembl chr21:46,197,750...46,203,953
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRAS NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 1:87,837,146...87,850,013
Ensembl chr 1:122,890,505...122,903,585
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISO (PMID:9770491) UniProt PMID:9770491 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TSC22D3 TSC22 domain family member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chr  X:96,806,179...96,870,020
Ensembl chr  X:107,179,077...107,242,902
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) MGI PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G USP19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5315325|PMID:21971047) UniProt PMID:21971047 MGI:5315325 NCBI chr 3:49,032,373...49,045,238
Ensembl chr 3:50,100,216...50,125,112
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868
JBrowse link
G YBX3 Y-box binding protein 3 acts_upstream_of_or_within ISO (MGI:3808638|PMID:18676817) MGI PMID:18676817 MGI:3808638 NCBI chr12:10,728,049...10,752,267
Ensembl chr12:10,996,380...11,018,172
JBrowse link
negative regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSTN myostatin acts_upstream_of_or_within
involved_in
ISO (MGI:3776975|PMID:18286185)
(MGI:2176357|PMID:11877467), (MGI:4948370|PMID:21390326), (MGI:5544527|PMID:24076600), (MGI:87393|PMID:9139826)
(PMID:15215484)
RGD
MGI
CACAO
PMID:9139826 PMID:11877467 PMID:15215484 PMID:16575154 PMID:18286185 PMID:21390326 PMID:24076600 MGI:2176357 MGI:3776975 MGI:4948370 MGI:5544527 MGI:87393 RGD:1601299 NCBI chr2B:77,364,927...77,452,426
Ensembl chr2B:195,283,903...195,290,922
JBrowse link
G TLL2 tolloid like 2 acts_upstream_of_or_within ISO (MGI:3776975|PMID:18286185) MGI PMID:18286185 MGI:3776975 NCBI chr10:92,978,334...93,129,098
Ensembl chr10:96,483,401...96,633,281
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:5605930|PMID:25014022) MGI PMID:25014022 MGI:5605930 NCBI chr17:36,389,549...36,425,161
Ensembl chr17:41,038,302...41,073,872
JBrowse link
positive regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARNTL aryl hydrocarbon receptor nuclear translocator like involved_in ISO (MGI:5553223|PMID:23525013) UniProt PMID:23525013 MGI:5553223 NCBI chr11:13,436,580...13,547,135
Ensembl chr11:13,163,028...13,240,376
JBrowse link
G GPC1 glypican 1 acts_upstream_of_or_within ISO (PMID:20100867) UniProt PMID:20100867 NCBI chr2B:127,684,839...127,717,294
Ensembl chr2B:246,511,082...246,523,569
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:21556048) UniProt PMID:21556048 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) UniProt PMID:18178581 MGI:3778600 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G LMOD3 leiomodin 3 involved_in ISO (PMID:25250574) UniProt PMID:25250574 NCBI chr 3:69,042,870...69,058,704
Ensembl chr 3:70,410,288...70,424,702
JBrowse link
G MYOG myogenin involved_in ISO (MGI:62381|PMID:8393145) UniProt PMID:8393145 MGI:62381 NCBI chr 1:178,684,933...178,687,971
Ensembl chr 1:182,979,700...182,982,611
JBrowse link
G SHOX2 short stature homeobox 2 involved_in ISO (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chr 3:155,138,969...155,149,619
Ensembl chr 3:163,190,284...163,199,239
JBrowse link
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RBM24 RNA binding motif protein 24 involved_in ISO (MGI:6148527|PMID:25313962) UniProt PMID:25313962 MGI:6148527 NCBI chr 6:17,140,450...17,153,035 JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (MGI:3522534|PMID:15572127) MGI PMID:15572127 MGI:3522534 NCBI chr11:120,772,160...120,877,529
Ensembl chr11:124,685,084...124,786,091
JBrowse link
G CTNNB1 catenin beta 1 involved_in ISO (MGI:5619733|PMID:23460868) CACAO PMID:23460868 MGI:5619733 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G FLOT1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
UniProt PMID:24046456 MGI:5634880 NCBI chr 6:30,472,839...30,487,809
Ensembl chr 6:31,342,033...31,357,559
JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:19388010 RGD:2317940 NCBI chr 5:39,936,630...39,961,519
Ensembl chr 5:40,548,919...40,573,785
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:9770491) UniProt PMID:9770491 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within ISO (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1929969|PMID:11171399) MGI PMID:11171399 MGI:1929969 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868
JBrowse link
G WNT3A Wnt family member 3A involved_in ISO (MGI:2179189|PMID:11856745) CACAO PMID:11856745 MGI:2179189 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) UniProt PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5608606|PMID:25220152) UniProt PMID:25220152 MGI:5608606 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
JBrowse link
G IGF2 insulin like growth factor 2 involved_in ISO (MGI:6120647|PMID:29440408) UniProt PMID:29440408 MGI:6120647 NCBI chr11:2,170,190...2,199,442
Ensembl chr11:2,202,743...2,228,890
JBrowse link
G MTM1 myotubularin 1 acts_upstream_of_or_within ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chr  X:140,218,742...140,323,495
Ensembl chr  X:150,174,758...150,255,381
JBrowse link
G NACA nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chr12:32,180,823...32,195,645
Ensembl chr12:32,434,366...32,447,510
JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chr17:53,958,807...54,014,752
Ensembl chr17:58,799,069...58,853,653
JBrowse link
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in ISO (MGI:3809313|PMID:18816858) UniProt PMID:18816858 MGI:3809313 NCBI chr2A:72,172,658...72,191,410
Ensembl chr2A:73,670,830...73,686,433
JBrowse link
G TBX1 T-box transcription factor 1 involved_in ISO (MGI:3809313|PMID:18816858) UniProt PMID:18816858 MGI:3809313 NCBI chr22:2,521,080...2,541,267 JBrowse link
regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX17 DEAD-box helicase 17 involved_in ISO (PMID:17011493) UniProt PMID:17011493 NCBI chr22:19,398,801...19,421,587
Ensembl chr22:37,218,884...37,241,425
JBrowse link
G DDX5 DEAD-box helicase 5 involved_in ISO (MGI:5315343|PMID:17011493) UniProt PMID:17011493 MGI:5315343 NCBI chr17:58,594,956...58,603,570
Ensembl chr17:63,689,082...63,696,142
JBrowse link
G KLHL41 kelch like family member 41 acts_upstream_of_or_within ISO (MGI:5424274|PMID:22562206) MGI PMID:22562206 MGI:5424274 NCBI chr2B:56,778,475...56,798,317
Ensembl chr2B:174,248,884...174,265,508
JBrowse link
G LOC100982351 ubiquinol-cytochrome-c reductase complex assembly factor 2 involved_in ISO (MGI:5520038|PMID:22363741) UniProt PMID:22363741 MGI:5520038 NCBI chr 6:33,270,785...33,284,931
Ensembl chr 6:34,379,212...34,393,373
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 involved_in ISO (MGI:5526938|PMID:15623503) UniProt PMID:15623503 MGI:5526938 NCBI chr 3:23,857,317...23,892,533
Ensembl chr 3:24,185,798...24,215,831
JBrowse link
G RBFOX1 RNA binding fox-1 homolog 1 acts_upstream_of_or_within ISO (MGI:5485311|PMID:23349951) MGI PMID:23349951 MGI:5485311 NCBI chr16:4,162,659...6,640,962
Ensembl chr16:5,418,607...7,889,215
JBrowse link
G SIX1 SIX homeobox 1 involved_in ISO (MGI:4836102|PMID:20696153) UniProt PMID:20696153 MGI:4836102 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXO22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chr15:54,817,076...54,849,271
Ensembl chr15:74,410,213...74,441,609
JBrowse link
G HDAC4 histone deacetylase 4 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chr2B:126,287,745...126,649,815
Ensembl chr2B:245,123,061...245,427,054
JBrowse link
G HDAC5 histone deacetylase 5 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chr17:13,273,052...13,319,695
Ensembl chr17:13,446,836...13,479,140
JBrowse link
G HDAC9 histone deacetylase 9 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chr 7:18,740,580...19,653,615
Ensembl chr 7:18,138,761...18,970,717
JBrowse link
G NACA nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chr12:32,180,823...32,195,645
Ensembl chr12:32,434,366...32,447,510
JBrowse link
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLN neurolysin acts_upstream_of_or_within ISO (MGI:5588076|PMID:24719333) MGI PMID:24719333 MGI:5588076 NCBI chr 5:48,180,768...48,283,281
Ensembl chr 5:49,840,482...49,938,192
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr2B:44,994,175...45,133,490
Ensembl chr2B:162,234,823...162,297,805
JBrowse link
G MEGF10 multiple EGF like domains 10 involved_in ISO (PMID:22101682) UniProt PMID:22101682 NCBI chr 5:122,639,155...122,877,324
Ensembl chr 5:128,466,095...128,641,043
JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281
JBrowse link
G WNT10B Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chr12:39,771,163...39,785,411
Ensembl chr12:40,659,106...40,665,734
JBrowse link
regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:3701154|PMID:17194759) UniProt PMID:17194759 MGI:3701154 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
JBrowse link
skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD1 ankyrin repeat domain 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr10:87,652,254...87,661,173
Ensembl chr10:91,180,034...91,188,165
JBrowse link
G ANKRD2 ankyrin repeat domain 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr10:94,192,920...94,204,400
Ensembl chr10:97,686,121...97,697,238
JBrowse link
G ANKRD33 ankyrin repeat domain 33 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr12:36,870,696...36,875,247 JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr14:74,566,607...74,608,905
Ensembl chr14:93,900,914...93,930,527
JBrowse link
G ATF3 activating transcription factor 3 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 1:188,176,728...188,188,842
Ensembl chr 1:193,036,793...193,049,150
JBrowse link
G BCL9 BCL9 transcription coactivator acts_upstream_of_or_within ISO (MGI:4368064|PMID:19699733) MGI PMID:19699733 MGI:4368064 NCBI chr 1:122,982,604...123,067,299
Ensembl chr 1:112,463,904...112,478,264
JBrowse link
G BCL9L BCL9 like acts_upstream_of_or_within ISO (MGI:4368064|PMID:19699733) MGI PMID:19699733 MGI:4368064 NCBI chr11:113,735,852...113,765,811
Ensembl chr11:117,666,995...117,678,598
JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 1:178,907,317...178,911,410
Ensembl chr 1:183,201,297...183,205,404
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 6:137,134,142...137,136,550 JBrowse link
G COPS2 COP9 signalosome subunit 2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr15:28,073,237...28,103,615
Ensembl chr15:46,396,077...46,426,396
JBrowse link
G DMRTA2 DMRT like family A2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 1:49,659,379...49,665,262 JBrowse link
G EEF2 eukaryotic translation elongation factor 2 ISO RGD PMID:16682826 RGD:10401256 NCBI chr19:3,000,608...3,009,918
Ensembl chr19:3,950,772...3,960,172
JBrowse link
G EGR1 early growth response 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
G EGR2 early growth response 2 acts_upstream_of_or_within
involved_in
ISO (MGI:5300631|PMID:22147266)
(MGI:3695113|PMID:11509834)
MGI
UniProt
PMID:11509834 PMID:22147266 MGI:3695113 MGI:5300631 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846
JBrowse link
G EMD emerin acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741) MGI PMID:19720741 MGI:4366679 NCBI chr  X:143,792,178...143,794,530 JBrowse link
G EOMES eomesodermin acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766
JBrowse link
G FOXN2 forkhead box N2 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr2A:48,441,683...48,506,631
Ensembl chr2A:49,364,147...49,428,502
JBrowse link
G GTF3C5 general transcription factor IIIC subunit 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 9:104,150,392...104,178,242
Ensembl chr 9:132,779,664...132,807,518
JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 1:38,913,549...38,929,798
Ensembl chr 1:40,240,118...40,256,933
JBrowse link
G HIVEP3 HIVEP zinc finger 3 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 1:40,805,355...41,335,290
Ensembl chr 1:42,120,741...42,203,313
JBrowse link
G HLF HLF transcription factor, PAR bZIP family member acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr17:49,353,790...49,413,676
Ensembl chr17:54,218,399...54,278,044
JBrowse link
G HMG20B high mobility group 20B acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr19:2,598,588...2,604,799
Ensembl chr19:3,548,451...3,554,725
JBrowse link
G KLF5 Kruppel like factor 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr13:54,287,578...54,310,216 JBrowse link
G KLHL41 kelch like family member 41 involved_in ISO (MGI:5424274|PMID:22562206) UniProt PMID:22562206 MGI:5424274 NCBI chr2B:56,778,475...56,798,317
Ensembl chr2B:174,248,884...174,265,508
JBrowse link
G LEMD2 LEM domain nuclear envelope protein 2 acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741)
(PMID:19720741)
MGI PMID:19720741 MGI:4366679 NCBI chr 6:33,344,372...33,363,143 JBrowse link
G LEMD3 LEM domain containing 3 acts_upstream_of_or_within ISO (MGI:4366679|PMID:19720741) MGI PMID:19720741 MGI:4366679 NCBI chr12:23,668,368...23,747,369
Ensembl chr12:24,172,749...24,252,314
JBrowse link
G MAFF MAF bZIP transcription factor F acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr22:19,114,929...19,129,901 JBrowse link
G MED20 mediator complex subunit 20 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 6:41,489,079...41,504,572
Ensembl chr 6:42,790,975...42,806,538
JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G MEF2D myocyte enhancer factor 2D acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 1:131,806,705...131,844,420
Ensembl chr 1:135,637,801...135,653,866
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G MYF5 myogenic factor 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr12:78,236,945...78,239,701
Ensembl chr12:81,347,324...81,350,389
JBrowse link
G MYF6 myogenic factor 6 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr12:78,226,562...78,229,470
Ensembl chr12:81,338,339...81,340,176
JBrowse link
G MYLK2 myosin light chain kinase 2 involved_in ISO (PMID:21556048) UniProt PMID:21556048 NCBI chr20:28,113,024...28,128,142
Ensembl chr20:29,243,391...29,258,508
JBrowse link
G MYOD1 myogenic differentiation 1 acts_upstream_of_or_within
involved_in
ISO (MGI:5300631|PMID:22147266)
(MGI:5706660|PMID:26658965)
MGI PMID:22147266 PMID:26658965 MGI:5300631 MGI:5706660 NCBI chr11:17,772,317...17,774,884
Ensembl chr11:17,456,124...17,458,690
JBrowse link
G NGFR nerve growth factor receptor ISO RGD PMID:16723531 RGD:1580249 NCBI chr17:8,089,600...8,109,361
Ensembl chr17:8,075,316...8,094,966
JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
JBrowse link
G NR4A1 nuclear receptor subfamily 4 group A member 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr12:36,703,903...36,740,211
Ensembl chr12:37,480,300...37,501,188
JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator acts_upstream_of_or_within ISO (MGI:4360820|PMID:19723804) MGI PMID:19723804 MGI:4360820 Ensembl chr16:29,015,155...29,016,987 JBrowse link
G PAX5 paired box 5 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 9:36,677,369...36,876,678
Ensembl chr 9:37,474,267...37,673,684
JBrowse link
G PHOX2B paired like homeobox 2B acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449
JBrowse link
G PLAGL1 PLAG1 like zinc finger 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 6:141,715,599...141,841,862
Ensembl chr 6:146,435,622...146,480,224
JBrowse link
G RB1 RB transcriptional corepressor 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr13:29,453,872...29,624,665
Ensembl chr13:48,155,795...48,324,575
JBrowse link
G SAP30 Sin3A associated protein 30 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 4:165,598,765...165,605,737 JBrowse link
G SCX scleraxis bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr 8:141,027,765...141,031,194 JBrowse link
G SMYD1 SET and MYND domain containing 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr2A:87,201,207...87,246,416
Ensembl chr2A:89,108,642...89,155,797
JBrowse link
G SNW1 SNW domain containing 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315
JBrowse link
G SOX11 SRY-box transcription factor 11 acts_upstream_of_or_within ISO (MGI:5297659|PMID:20847309) MGI PMID:20847309 MGI:5297659 NCBI chr2A:5,699,738...5,711,210 JBrowse link
G SOX8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631
G VAX1 ventral anterior homeobox 1 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr10:113,710,934...113,720,671 JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (MGI:4368064|PMID:19699733) MGI PMID:19699733 MGI:4368064 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469
JBrowse link
G ZNF689 zinc finger protein 689 acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) MGI PMID:22147266 MGI:5300631 NCBI chr16:24,356,711...24,365,116
Ensembl chr16:30,973,859...30,981,882
JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA1 actin alpha 1, skeletal muscle involved_in ISO (MGI:78319|PMID:2731651) UniProt PMID:2731651 MGI:78319 NCBI chr 1:204,975,646...204,978,523
Ensembl chr 1:210,007,622...210,010,469
JBrowse link
G BIN3 bridging integrator 3 acts_upstream_of_or_within ISO (MGI:5517720|PMID:23872330) MGI PMID:23872330 MGI:5517720 NCBI chr 8:21,870,784...21,919,077
Ensembl chr 8:18,809,582...18,858,912
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:66718|PMID:8143864)
(MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749)
MGI PMID:289331 PMID:8143864 PMID:8462749 MGI:3630139 MGI:53207 MGI:66718 NCBI chr 1:176,639,189...176,712,171
Ensembl chr 1:180,941,836...181,014,823
JBrowse link
G CAV2 caveolin 2 acts_upstream_of_or_within ISO (MGI:3695802|PMID:17200204) MGI PMID:17200204 MGI:3695802 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415
JBrowse link
G DNER delta/notch like EGF repeat containing acts_upstream_of_or_within ISO (MGI:3583881|PMID:15965470) MGI PMID:15965470 MGI:3583881 NCBI chr2B:116,604,193...116,963,026
Ensembl chr2B:235,409,108...235,642,161
JBrowse link
G GPX1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (MGI:3662804|PMID:16962942) MGI PMID:16962942 MGI:3662804 NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826
JBrowse link
G HOMER1 homer scaffold protein 1 acts_upstream_of_or_within ISO (MGI:3784629|PMID:18268005) MGI PMID:18268005 MGI:3784629 NCBI chr 5:35,794,627...35,936,111
Ensembl chr 5:36,064,665...36,205,928
JBrowse link
G KLHL40 kelch like family member 40 acts_upstream_of_or_within
involved_in
ISO (MGI:5586592|PMID:24960163)
(MGI:5700633|PMID:25940086)
MGI
UniProt
PMID:24960163 PMID:25940086 MGI:5586592 MGI:5700633 NCBI chr 3:42,592,977...42,600,100
Ensembl chr 3:43,657,128...43,664,055
JBrowse link
G LMOD3 leiomodin 3 involved_in ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) UniProt PMID:25774500 PMID:26035871 MGI:5644091 MGI:5648755 NCBI chr 3:69,042,870...69,058,704
Ensembl chr 3:70,410,288...70,424,702
JBrowse link
G LOC100989368 Kell metallo-endopeptidase (Kell blood group) acts_upstream_of_or_within ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chr 7:134,897,567...135,237,214
Ensembl chr 7:147,423,103...147,443,895
Ensembl chr 7:147,423,103...147,443,895
JBrowse link
G MYOD1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chr11:17,772,317...17,774,884
Ensembl chr11:17,456,124...17,458,690
JBrowse link
G MYOG myogenin acts_upstream_of_or_within ISO (MGI:62381|PMID:8393145) MGI PMID:8393145 MGI:62381 NCBI chr 1:178,684,933...178,687,971
Ensembl chr 1:182,979,700...182,982,611
JBrowse link
G MYORG myogenesis regulating glycosidase (putative) involved_in
acts_upstream_of_or_within
ISO (PMID:19706595)
(MGI:4422154|PMID:19706595)
UniProt
MGI
PMID:19706595 MGI:4422154 NCBI chr 9:34,205,177...34,213,351
Ensembl chr 9:35,015,847...35,017,991
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:1933051|PMID:11254352) MGI PMID:11254352 MGI:1933051 NCBI chr16:48,456,144...48,603,306
Ensembl chr16:67,888,806...67,996,274
JBrowse link
G P2RX2 purinergic receptor P2X 2 acts_upstream_of_or_within ISO (MGI:3766888|PMID:17706883) MGI PMID:17706883 MGI:3766888 NCBI chr12:129,969,793...129,974,399 JBrowse link
G PLEC plectin involved_in ISO (MGI:3797705|PMID:18490514)
(MGI:5567855|PMID:24487589)
MGI PMID:18490514 PMID:24487589 MGI:3797705 MGI:5567855 NCBI chr 8:140,681,252...140,742,753
Ensembl chr 8:143,674,696...143,712,433
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) MGI PMID:16024798 MGI:3586394 NCBI chr 4:93,447,095...93,770,339
Ensembl chr 4:104,113,520...104,435,394
JBrowse link
G RCAN1 regulator of calcineurin 1 acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) MGI PMID:16024798 MGI:3586394 NCBI chr21:20,889,123...20,987,964
Ensembl chr21:34,258,355...34,267,025
JBrowse link
G RYR1 ryanodine receptor 1 involved_in ISO (MGI:3764002|PMID:18003898) UniProt PMID:18003898 MGI:3764002 NCBI chr19:35,527,466...35,685,446
Ensembl chr19:44,106,036...44,256,327
JBrowse link
G SELENON selenoprotein N acts_upstream_of_or_within ISO (MGI:5494499|PMID:23325319) MGI PMID:23325319 MGI:5494499 NCBI chr 1:25,058,907...25,076,817
Ensembl chr 1:26,127,125...26,141,745
JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:1095997|PMID:9284043) MGI PMID:9284043 MGI:1095997 NCBI chr 1:944,428...1,029,695
Ensembl chr 1:2,091,620...2,174,080
JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (MGI:5438143|PMID:22987639) MGI PMID:22987639 MGI:5438143 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
G STAC3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within ISO (MGI:5508972|PMID:23626854) MGI PMID:23626854 MGI:5508972 NCBI chr12:31,674,537...31,683,917
Ensembl chr12:31,928,955...31,936,251
JBrowse link
G WNT10B Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chr12:39,771,163...39,785,411
Ensembl chr12:40,659,106...40,665,734
JBrowse link
G XK X-linked Kx blood group acts_upstream_of_or_within ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chr  X:30,136,046...30,182,541
Ensembl chr  X:37,846,539...37,892,348
JBrowse link
skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLHL40 kelch like family member 40 involved_in
acts_upstream_of_or_within
ISO (MGI:5700633|PMID:25940086)
(MGI:5565628|PMID:24361185)
UniProt
MGI
PMID:24361185 PMID:25940086 MGI:5565628 MGI:5700633 NCBI chr 3:42,592,977...42,600,100
Ensembl chr 3:43,657,128...43,664,055
JBrowse link
G SIX4 SIX homeobox 4 involved_in ISO (MGI:5298278|PMID:21884692) UniProt PMID:21884692 MGI:5298278 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
skeletal muscle satellite cell commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX7 paired box 7 acts_upstream_of_or_within ISO (MGI:1889987|PMID:11030621) MGI PMID:11030621 MGI:1889987 NCBI chr 1:17,589,513...17,707,442
Ensembl chr 1:18,639,641...18,756,952
JBrowse link
skeletal muscle satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (MGI:3522534|PMID:15572127) MGI PMID:15572127 MGI:3522534 NCBI chr11:120,772,160...120,877,529
Ensembl chr11:124,685,084...124,786,091
JBrowse link
G KLF5 Kruppel like factor 5 acts_upstream_of_or_within ISO (MGI:5823533|PMID:27743478) MGI PMID:27743478 MGI:5823533 NCBI chr13:54,287,578...54,310,216 JBrowse link
G MEGF10 multiple EGF like domains 10 involved_in ISO (PMID:22101682)
(MGI:5319607|PMID:18056409)
UniProt PMID:18056409 PMID:22101682 MGI:5319607 NCBI chr 5:122,639,155...122,877,324
Ensembl chr 5:128,466,095...128,641,043
JBrowse link
G MYLK2 myosin light chain kinase 2 involved_in ISO (MGI:5013486|PMID:21556048) UniProt PMID:21556048 MGI:5013486 NCBI chr20:28,113,024...28,128,142
Ensembl chr20:29,243,391...29,258,508
JBrowse link
G SELENON selenoprotein N acts_upstream_of_or_within ISO (MGI:4936779|PMID:21131290) MGI PMID:21131290 MGI:4936779 NCBI chr 1:25,058,907...25,076,817
Ensembl chr 1:26,127,125...26,141,745
JBrowse link
skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BVES blood vessel epicardial substance involved_in ISO (PMID:26642364) UniProt PMID:26642364 NCBI chr 6:102,915,148...102,951,141
Ensembl chr 6:106,787,615...106,822,050
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:52955|PMID:14300095), (MGI:56113|PMID:6500174), (MGI:63119|PMID:14300096), (MGI:76166|PMID:7635187) MGI PMID:6500174 PMID:7635187 PMID:14300095 PMID:14300096 MGI:52955 MGI:56113 MGI:63119 MGI:76166 NCBI chr 1:176,639,189...176,712,171
Ensembl chr 1:180,941,836...181,014,823
JBrowse link
G CASQ1 calsequestrin 1 ISO RGD PMID:8600158 RGD:2313254 NCBI chr 1:135,544,249...135,555,545
Ensembl chr 1:139,465,605...139,476,969
JBrowse link
G CAV1 caveolin 1 acts_upstream_of_or_within ISO (MGI:3695802|PMID:17200204) MGI PMID:17200204 MGI:3695802 NCBI chr 7:108,497,125...108,533,090
Ensembl chr 7:121,193,424...121,229,655
JBrowse link
G CCNT2 cyclin T2 involved_in ISO (MGI:5706910|PMID:23060074) UniProt PMID:23060074 MGI:5706910 NCBI chr2B:24,903,389...24,943,122
Ensembl chr2B:138,994,868...139,035,301
JBrowse link
G CDK5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (MGI:892714|PMID:9191048) RGD
MGI
PMID:9191048 PMID:15208659 MGI:892714 RGD:1598429 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499
JBrowse link
G CFL2 cofilin 2 involved_in ISO (MGI:5784971|PMID:24598388) UniProt PMID:24598388 MGI:5784971 NCBI chr14:15,468,532...15,473,094
Ensembl chr14:33,655,744...33,659,473
JBrowse link
G CFLAR CASP8 and FADD like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) BHF-UCL PMID:21364645 MGI:5707584 NCBI chr2B:88,373,057...88,429,959
Ensembl chr2B:206,528,943...206,577,045
JBrowse link
G CKMT2 creatine kinase, mitochondrial 2 ISO RGD PMID:8086475 RGD:11565082 NCBI chr 5:34,013,387...34,046,522
Ensembl chr 5:34,324,529...34,356,919
JBrowse link
G COL19A1 collagen type XIX alpha 1 chain acts_upstream_of_or_within ISO (MGI:3053247|PMID:15302855) MGI PMID:15302855 MGI:3053247 NCBI chr 6:67,706,969...68,049,323
Ensembl chr 6:71,006,284...71,340,612
JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:1389227 RGD:727559 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415
JBrowse link
G CTSB cathepsin B ISO RGD PMID:16497156 RGD:1599532 NCBI chr 8:7,333,498...7,359,264 JBrowse link
G DCN decorin ISO RGD PMID:17679144 RGD:2303553 NCBI chr12:88,678,791...88,715,677
Ensembl chr12:91,994,129...92,031,413
JBrowse link
G DMD dystrophin acts_upstream_of_or_within ISO (MGI:3623691|PMID:16371353)
(MGI:3586427|PMID:12895031)
MGI PMID:12895031 PMID:16371353 MGI:3586427 MGI:3623691 NCBI chr  X:23,728,650...26,338,849
Ensembl chr  X:31,282,415...33,492,733
JBrowse link
G DYSF dysferlin acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) MGI PMID:22174839 MGI:5315068 NCBI chr2A:71,495,573...71,730,073
Ensembl chr2A:72,994,888...73,228,846
JBrowse link
G ELN elastin acts_upstream_of_or_within ISO (MGI:3027647|PMID:14614988) MGI PMID:14614988 MGI:3027647
G EP300 E1A binding protein p300 acts_upstream_of_or_within ISO (MGI:2677591|PMID:14517256) MGI PMID:14517256 MGI:2677591 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:8846777 RGD:2289973 NCBI chr17:17,560,337...17,600,808
Ensembl chr17:17,777,434...17,805,862
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:8846777 RGD:2289973 NCBI chr12:32,811,533...32,834,958
Ensembl chr12:33,063,434...33,084,994
JBrowse link
G FLNB filamin B acts_upstream_of_or_within ISO (MGI:2446071|PMID:11807098) MGI PMID:11807098 MGI:2446071 NCBI chr 3:57,943,263...58,107,115
Ensembl chr 3:59,359,234...59,521,989
JBrowse link
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (MGI:3710027|PMID:17428829) MGI PMID:17428829 MGI:3710027 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173
JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (MGI:3710027|PMID:17428829) MGI PMID:17428829 MGI:3710027 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893
JBrowse link
G GPCPD1 glycerophosphocholine phosphodiesterase 1 acts_upstream_of_or_within ISO (MGI:4839873|PMID:20576599) MGI PMID:20576599 MGI:4839873 NCBI chr20:5,547,190...5,613,849
Ensembl chr20:5,336,003...5,397,448
JBrowse link
G HDAC6 histone deacetylase 6 acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) MGI PMID:22174839 MGI:5315068 NCBI chr  X:41,099,539...41,122,650
Ensembl chr  X:48,960,430...48,982,642
JBrowse link
G HLX H2.0 like homeobox acts_upstream_of_or_within ISO (MGI:79044|PMID:8557196) MGI PMID:8557196 MGI:79044 NCBI chr 1:196,465,704...196,471,803
Ensembl chr 1:201,500,470...201,506,222
JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within ISO (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr2B:63,395,636...63,399,704
Ensembl chr2B:181,104,876...181,110,963
JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within ISO (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr2B:63,401,813...63,404,731
Ensembl chr2B:181,112,002...181,113,415
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:12909603 RGD:10059373 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
G ITGA7 integrin subunit alpha 7 ISO RGD PMID:1315319 RGD:70774 NCBI chr12:33,195,602...33,226,796
Ensembl chr12:33,923,549...33,950,886
JBrowse link
G KCNAB1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ISO RGD PMID:12652645 RGD:9743957 NCBI chr 3:153,175,465...153,594,375
Ensembl chr 3:161,402,134...161,651,524
JBrowse link
G LOC100977039 supervillin involved_in ISO (PMID:12711699) UniProt PMID:12711699 NCBI chr10:29,609,492...29,886,920
Ensembl chr10:29,965,792...30,064,765
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 acts_upstream_of_or_within ISO (MGI:3581988|PMID:15890335) MGI PMID:15890335 MGI:3581988 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114
JBrowse link
G MBNL1 muscleblind like splicing regulator 1 acts_upstream_of_or_within ISO (MGI:3655436|PMID:16717059) MGI PMID:16717059 MGI:3655436 NCBI chr 3:149,288,323...149,487,635
Ensembl chr 3:156,888,763...157,054,207
JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G MEOX2 mesenchyme homeobox 2 acts_upstream_of_or_within ISO (MGI:1340181|PMID:10403250) MGI PMID:10403250 MGI:1340181 NCBI chr 7:16,268,225...16,343,914
Ensembl chr 7:15,598,466...15,673,935
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:76093|PMID:7651534) MGI PMID:7651534 MGI:76093 NCBI chr 7:108,646,278...108,772,238
Ensembl chr 7:121,365,438...121,468,159
JBrowse link
G METTL21C methyltransferase 21C, AARS1 lysine acts_upstream_of_or_within ISO (MGI:5781029|PMID:24677265) MGI PMID:24677265 MGI:5781029 NCBI chr13:83,845,572...83,855,215
Ensembl chr13:102,981,536...102,990,336
JBrowse link
G METTL8 methyltransferase 8, methylcytidine acts_upstream_of_or_within ISO (MGI:3582105|PMID:15992539) MGI PMID:15992539 MGI:3582105 NCBI chr2B:58,605,042...58,725,999
Ensembl chr2B:176,070,609...176,183,862
JBrowse link
G MYF5 myogenic factor 5 acts_upstream_of_or_within ISO (MGI:3849775|PMID:19531352)
(MGI:64468|PMID:8269513)
MGI PMID:8269513 PMID:19531352 MGI:3849775 MGI:64468 NCBI chr12:78,236,945...78,239,701
Ensembl chr12:81,347,324...81,350,389
JBrowse link
G MYF6 myogenic factor 6 acts_upstream_of_or_within ISO (MGI:72107|PMID:7720708)
(MGI:76810|PMID:7588068)
(MGI:3849775|PMID:19531352)
MGI PMID:7588068 PMID:7720708 PMID:19531352 MGI:3849775 MGI:72107 MGI:76810 NCBI chr12:78,226,562...78,229,470
Ensembl chr12:81,338,339...81,340,176
JBrowse link
G MYH14 myosin heavy chain 14 involved_in ISO (PMID:21480433) UniProt PMID:21480433 NCBI chr19:47,169,303...47,273,815
Ensembl chr19:56,081,644...56,177,902
JBrowse link
G MYL3 myosin light chain 3 ISO RGD PMID:2717409 RGD:633442 NCBI chr 3:46,758,058...46,782,425
Ensembl chr 3:47,859,467...47,865,084
JBrowse link
G MYLPF myosin light chain, phosphorylatable, fast skeletal muscle involved_in ISO (MGI:3773777|PMID:17356007) RGD
BHF-UCL
PMID:6179945 PMID:17356007 MGI:3773777 RGD:633441 NCBI chr16:24,591,731...24,598,807
Ensembl chr16:30,747,060...30,751,165
JBrowse link
G MYOD1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:3586427|PMID:12895031)
(MGI:2180395|PMID:12037571), (MGI:3027696|PMID:14762206)
(MGI:3849775|PMID:19531352)
(MGI:64468|PMID:8269513)
MGI PMID:8269513 PMID:12037571 PMID:12895031 PMID:14762206 PMID:19531352 MGI:2180395 MGI:3027696 MGI:3586427 MGI:3849775 MGI:64468 NCBI chr11:17,772,317...17,774,884
Ensembl chr11:17,456,124...17,458,690
JBrowse link
G MYOG myogenin acts_upstream_of_or_within ISO (MGI:3027696|PMID:14762206) MGI PMID:14762206 MGI:3027696 NCBI chr 1:178,684,933...178,687,971
Ensembl chr 1:182,979,700...182,982,611
JBrowse link
G MYOZ1 myozenin 1 involved_in ISO (MGI:3831256|PMID:18846255) BHF-UCL PMID:18846255 MGI:3831256 NCBI chr10:70,179,020...70,194,885
Ensembl chr10:72,635,720...72,645,602
JBrowse link
G MYOZ2 myozenin 2 involved_in ISO (MGI:3513659|PMID:15543153) BHF-UCL PMID:15543153 MGI:3513659 NCBI chr 4:111,330,427...111,382,323
Ensembl chr 4:121,880,721...121,931,558
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:9839950 RGD:5688344 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 ISO RGD PMID:12213446 RGD:2302390 NCBI chr10:100,093,614...100,192,485 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (MGI:66069|PMID:7926784) MGI PMID:7926784 MGI:66069 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin involved_in ISO (MGI:3849657|PMID:19470472) UniProt PMID:19470472 MGI:3849657 NCBI chr19:32,742,802...32,770,600
Ensembl chr19:41,492,444...41,518,471
JBrowse link
G NR2F2 nuclear receptor subfamily 2 group F member 2 acts_upstream_of_or_within ISO (MGI:3609470|PMID:16251273)
(MGI:3525754|PMID:15572686)
MGI PMID:15572686 PMID:16251273 MGI:3525754 MGI:3609470 NCBI chr15:75,008,879...75,021,981 JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (MGI:1889987|PMID:11030621) MGI PMID:11030621 MGI:1889987 NCBI chr 1:17,589,513...17,707,442
Ensembl chr 1:18,639,641...18,756,952
JBrowse link
G PDLIM3 PDZ and LIM domain 3 NOT|acts_upstream_of_or_within ISO (MGI:1930426|PMID:11238905) MGI PMID:11238905 MGI:1930426 NCBI chr 4:177,664,420...177,698,364
Ensembl chr 4:189,880,938...189,914,707
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:1347482|PMID:10572050) MGI PMID:10572050 MGI:1347482 NCBI chr 4:103,112,624...103,137,356 JBrowse link
G PLEC plectin involved_in ISO (MGI:1350765|PMID:9389647) MGI PMID:9389647 MGI:1350765 NCBI chr 8:140,681,252...140,742,753
Ensembl chr 8:143,674,696...143,712,433
JBrowse link
G RCAN1 regulator of calcineurin 1 ISO RGD PMID:15219871 RGD:1304341 NCBI chr21:20,889,123...20,987,964
Ensembl chr21:34,258,355...34,267,025
JBrowse link
G RHOA ras homolog family member A acts_upstream_of_or_within ISO (MGI:2175934|PMID:11877460) MGI PMID:11877460 MGI:2175934 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G RXRG retinoid X receptor gamma ISO RGD PMID:9389449 RGD:633976 NCBI chr 1:140,832,717...140,877,046
Ensembl chr 1:144,623,133...144,723,494
JBrowse link
G SGCE sarcoglycan epsilon ISO RGD PMID:14625080 RGD:1303966 NCBI chr 7:86,535,215...86,606,114 JBrowse link
G SIN3B SIN3 transcription regulator family member B involved_in ISO (MGI:3687784|PMID:10620510) UniProt PMID:10620510 MGI:3687784 NCBI chr19:16,317,329...16,367,320
Ensembl chr19:17,296,161...17,345,533
JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within
ISO (MGI:3715562|PMID:17592144)
(MGI:3578604|PMID:15788460)
UniProt
MGI
PMID:15788460 PMID:17592144 MGI:3578604 MGI:3715562 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within
ISO (MGI:3715562|PMID:17592144)
(MGI:3578604|PMID:15788460)
UniProt
MGI
PMID:15788460 PMID:17592144 MGI:3578604 MGI:3715562 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G SKIL SKI like proto-oncogene involved_in ISO (PMID:17202138) UniProt PMID:17202138 NCBI chr 3:167,372,104...167,411,287
Ensembl chr 3:175,562,007...175,600,181
JBrowse link
G SRPK3 SRSF protein kinase 3 acts_upstream_of_or_within ISO (MGI:3588628|PMID:16140986) MGI PMID:16140986 MGI:3588628 NCBI chr  X:143,331,213...143,336,426
Ensembl chr  X:153,216,794...153,222,273
JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:17043667) HGNC-UCL PMID:17043667 NCBI chr  X:143,853,054...143,863,491
Ensembl chr  X:153,725,294...153,734,046
JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:16439574 RGD:2302095 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041
JBrowse link
G VAMP5 vesicle associated membrane protein 5 acts_upstream_of_or_within ISO (MGI:1858282|PMID:9725904) MGI PMID:9725904 MGI:1858282 NCBI chr2A:85,634,555...85,646,120
Ensembl chr2A:87,187,569...87,196,532
JBrowse link
G VGLL2 vestigial like family member 2 acts_upstream_of_or_within ISO (MGI:3027696|PMID:14762206) MGI PMID:14762206 MGI:3027696 NCBI chr 6:115,073,919...115,082,212
Ensembl chr 6:119,215,683...119,223,541
JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 involved_in ISO (MGI:4418579|PMID:20059953) UniProt PMID:20059953 MGI:4418579 NCBI chr 1:219,660,496...219,669,134
Ensembl chr 1:225,042,281...225,050,259
JBrowse link
skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA1 cholinergic receptor nicotinic alpha 1 subunit involved_in ISO (PMID:18252226) BHF-UCL PMID:18252226 NCBI chr2B:62,022,498...62,039,370
Ensembl chr2B:179,476,677...179,504,763
JBrowse link
G CHRND cholinergic receptor nicotinic delta subunit involved_in ISO (PMID:18252226) BHF-UCL PMID:18252226 NCBI chr2B:119,757,722...119,768,254
Ensembl chr2B:238,676,495...238,686,987
JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:21235761 RGD:5130936 NCBI chr 7:31,265,619...31,313,902
Ensembl chr 7:31,386,026...31,434,220
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5442624|PMID:22940113) UniProt PMID:22940113 MGI:5442624 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12612
    developmental process 5882
      anatomical structure development 5485
        muscle structure development 659
          muscle organ development 320
            skeletal muscle organ development 210
              diaphragm development + 11
              extraocular skeletal muscle development + 6
              muscle attachment + 0
              skeletal muscle tissue development + 197
              somitomeric trunk muscle development + 0
Path 2
Term Annotations click to browse term
  biological_process 12612
    developmental process 5882
      anatomical structure development 5485
        multicellular organism development 5017
          system development 4723
            animal organ development 3650
              muscle organ development 320
                skeletal muscle organ development 210
                  diaphragm development + 11
                  extraocular skeletal muscle development + 6
                  muscle attachment + 0
                  skeletal muscle tissue development + 197
                  somitomeric trunk muscle development + 0
paths to the root