ONTOLOGY REPORT - ANNOTATIONS
Term: mesenchyme development
Accession: GO:0060485
browse the term
Definition: The process whose specific outcome is the progression of a mesenchymal tissue over time, from its formation to the mature structure. A mesenchymal tissue is made up of loosely packed stellate cells.
Synonyms: exact_synonym: mesenchymal development
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Bmp2
bone morphogenetic protein 2
involved_in
ISO
(PMID:20890042)
RGD
PMID:20890042
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Bmp7
bone morphogenetic protein 7
involved_in
ISO
(MGI:1289719|PMID:9693150)
RGD
PMID:9693150
MGI:1289719
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
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Bnc2
basonuclin 2
acts_upstream_of_or_within
ISO
MGI:3639337 (MGI:4355754|PMID:19706529)
RGD
PMID:19706529
MGI:4355754
NCBI chr 5:98,679,071...99,079,742
Ensembl chr 5:98,687,410...99,079,426
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(MGI:5912649|PMID:28859094)
RGD
PMID:28859094
MGI:5912649
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
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Hand1
heart and neural crest derivatives expressed 1
acts_upstream_of_or_within
ISO
MGI:103580 (MGI:3765375|PMID:17764670)
RGD
PMID:17764670
MGI:3765375
NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
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Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO
MGI:103577 (MGI:3765375|PMID:17764670)
RGD
PMID:17764670
MGI:3765375
NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
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Prickle1
prickle planar cell polarity protein 1
involved_in
ISO IEA
MGI:5645931 (MGI:6117543|PMID:29450535) GO_REF:0000107
RGD Ensembl
PMID:29450535
GO_REF:0000107 MGI:6117543
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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Sox4
SRY-box transcription factor 4
involved_in
ISO
(MGI:5285157|PMID:20596238)
RGD
PMID:20596238
MGI:5285157
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
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Tead2
TEA domain transcription factor 2
involved_in
ISO
UniProtKB:Q7M6Y2 (MGI:5285157|PMID:20596238)
RGD
PMID:20596238
MGI:5285157
NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186
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Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(MGI:3814273|PMID:18924235)
RGD
PMID:18924235
MGI:3814273
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:2156191 (MGI:4413394|PMID:19705442)
RGD
PMID:19705442
MGI:4413394
NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
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Ctnnb1
catenin beta 1
involved_in
ISO IEA ISS
(PMID:17072303) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:17072303
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Tcf7l2
transcription factor 7 like 2
involved_in
ISO
(PMID:17072303)
RGD
PMID:17072303
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
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Sema3c
semaphorin 3C
involved_in
ISO
(MGI:5693177|PMID:26053665)
RGD
PMID:26053665
MGI:5693177
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
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Adam15
ADAM metallopeptidase domain 15
acts_upstream_of_or_within
ISO
(MGI:4458867|PMID:19156209)
RGD
PMID:19156209
MGI:4458867
NCBI chr 2:174,754,631...174,765,136
Ensembl chr 2:174,754,633...174,765,113
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Bmp2
bone morphogenetic protein 2
involved_in
ISO IEA
(PMID:18184661) GO_REF:0000107
RGD Ensembl
PMID:18184661
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO
UniProtKB:Q9WV93 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
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Notch1
notch receptor 1
involved_in
ISO
(MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
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Rtn4
reticulon 4
acts_upstream_of_or_within
ISO
(MGI:4458867|PMID:19156209)
RGD
PMID:19156209
MGI:4458867
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
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Tbx3
T-box transcription factor 3
involved_in
ISO
(PMID:22130515)
RGD
PMID:22130515
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
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Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10092230)
UniProt RGD
PMID:10092230
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
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Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:18184661)
RGD
PMID:18184661
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
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Wnt16
Wnt family member 16
acts_upstream_of_or_within
ISO
(MGI:4458867|PMID:19156209)
RGD
PMID:19156209
MGI:4458867
NCBI chr 4:50,820,968...50,831,380
Ensembl chr 4:50,820,968...50,831,380
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Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:4361155 (MGI:4439199|PMID:20159597)
RGD
PMID:20159597
MGI:4439199
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2179740 (MGI:2179743|PMID:11694877)
RGD
PMID:11694877
MGI:2179743
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
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Mapk1
mitogen activated protein kinase 1
acts_upstream_of_or_within
ISO
MGI:1346859 (MGI:3832113|PMID:18952847)
RGD
PMID:18952847
MGI:3832113
NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
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Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (MGI:3832113|PMID:18952847)
RGD
PMID:18952847
MGI:3832113
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
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Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3589208 (MGI:4849577|PMID:21098571)
RGD
PMID:21098571
MGI:4849577
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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Hand2
heart and neural crest derivatives expressed 2
involved_in
ISO
(MGI:4413411|PMID:19008477)
RGD
PMID:19008477
MGI:4413411
NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
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Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:4354447|PMID:19609448)
Ensembl RGD
PMID:19609448
GO_REF:0000107 MGI:4354447
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:4359139|PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107 MGI:4359139
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (MGI:3805126|PMID:18539270)
RGD
PMID:18539270
MGI:3805126
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
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Cdc42
cell division cycle 42
involved_in
ISO
(MGI:6362316|PMID:31219639)
RGD
PMID:31219639
MGI:6362316
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
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Edn1
endothelin 1
involved_in
ISO
(MGI:6362316|PMID:31219639)
RGD
PMID:31219639
MGI:6362316
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
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Ednra
endothelin receptor type A
involved_in
ISO
MGI:1857473|MGI:2687362 (MGI:6362316|PMID:31219639)
RGD
PMID:31219639
MGI:6362316
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
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Folr1
folate receptor alpha
involved_in
ISO
(MGI:3721767|PMID:17286298)
RGD
PMID:17286298
MGI:3721767
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
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Hand2
heart and neural crest derivatives expressed 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386570|MGI:3803647 (MGI:4453274|PMID:20144608)
Ensembl RGD
PMID:20144608
GO_REF:0000107 MGI:4453274
NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
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Nrp1
neuropilin 1
NOT|involved_in
ISO
(MGI:5693177|PMID:26053665)
RGD
PMID:26053665
MGI:5693177
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Pitx2
paired-like homeodomain 2
involved_in
ISO
(MGI:2446944|PMID:12464179)
RGD
PMID:12464179
MGI:2446944
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (MGI:3805126|PMID:18539270)
RGD
PMID:18539270
MGI:3805126
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
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Dchs1
dachsous cadherin-related 1
involved_in
ISO
(PMID:26258302)
RGD
PMID:26258302
NCBI chr 1:160,104,931...160,138,958
Ensembl chr 1:160,104,931...160,124,808
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Eng
endoglin
acts_upstream_of_or_within
ISO
MGI:2177824 (MGI:4368063|PMID:19703439)
RGD
PMID:19703439
MGI:4368063
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
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Notch1
notch receptor 1
involved_in
ISO
(MGI:4837019|PMID:20890042)
RGD
PMID:20890042
MGI:4837019
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Snai2
snail family transcriptional repressor 2
involved_in
ISO
(MGI:3808643|PMID:18663143)
RGD
PMID:18663143
MGI:3808643
NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
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Tgfbr2
transforming growth factor, beta receptor 2
NOT|involved_in
ISO
(MGI:4821522|PMID:20652948)
RGD
PMID:20652948
MGI:4821522
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
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Dand5
DAN domain BMP antagonist family member 5
involved_in
ISO
(MGI:3055649|PMID:15466485)
RGD
PMID:15466485
MGI:3055649
NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
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Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO
GO_REF:0000107 (MGI:5142377|PMID:11517919)
Ensembl RGD
PMID:11517919
GO_REF:0000107 MGI:5142377
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Smo
smoothened, frizzled class receptor
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5142377|PMID:11517919) GO_REF:0000024
Ensembl RGD UniProt
PMID:11517919
GO_REF:0000024 GO_REF:0000107 MGI:5142377
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
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Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:4359139|PMID:19509466)
Ensembl RGD
PMID:19509466
GO_REF:0000107 MGI:4359139
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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Acvr1
activin A receptor type 1
involved_in
ISO
(PMID:19506109)
RGD
PMID:19506109
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
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Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:3814273|PMID:18924235)
Ensembl RGD
PMID:18924235
GO_REF:0000107 MGI:3814273
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(MGI:2429424|PMID:12441304)
RGD
PMID:12441304
MGI:2429424
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
acts_upstream_of_or_within
ISO
MGI:2176158 (MGI:3574743|PMID:15750185)
RGD
PMID:15750185
MGI:3574743
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
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Epha3
Eph receptor A3
involved_in
ISO
(MGI:3703403|PMID:17046737)
RGD
PMID:17046737
MGI:3703403
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
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Erbb3
erb-b2 receptor tyrosine kinase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1928828 (MGI:1194988|PMID:9362461)
Ensembl RGD
PMID:9362461
GO_REF:0000107 MGI:1194988
NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
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Erg
ETS transcription factor ERG
acts_upstream_of_or_within
ISO
MGI:5443838 (MGI:5442628|PMID:22932696)
RGD
PMID:22932696
MGI:5442628
NCBI chr11:34,678,614...34,900,951
Ensembl chr11:34,678,618...34,845,871
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Foxf1
forkhead box F1
involved_in
ISO
(PMID:19500772)
RGD
PMID:19500772
NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
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Gata4
GATA binding protein 4
involved_in acts_upstream_of_or_within
ISO
(PMID:21330551) MGI:102541 (MGI:3833786|PMID:19084512) (MGI:3769320|PMID:17643447)
RGD
PMID:17643447 PMID:19084512 PMID:21330551
MGI:3769320 MGI:3833786
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
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Nedd4
NEDD4 E3 ubiquitin protein ligase
acts_upstream_of_or_within
ISO
MGI:3799317|MGI:98737 (MGI:4452597|PMID:20026598)
RGD
PMID:20026598
MGI:4452597
NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
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Nfatc1
nuclear factor of activated T-cells 1
involved_in
ISO
UniProtKB:P61022 (MGI:5319103|PMID:22300732)
RGD
PMID:22300732
MGI:5319103
NCBI chr18:74,046,421...74,156,041
Ensembl chr18:74,046,904...74,156,028
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Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:1857230 (MGI:3027664|PMID:14701881)
RGD
PMID:14701881
MGI:3027664
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Rbm24
RNA binding motif protein 24
involved_in
ISO
(MGI:6149097|PMID:29358667)
RGD
PMID:29358667
MGI:6149097
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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Tbx5
T-box transcription factor 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:95664 (MGI:3833786|PMID:19084512)
Ensembl RGD
PMID:19084512
GO_REF:0000107 MGI:3833786
NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
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Thbs1
thrombospondin 1
acts_upstream_of_or_within
ISO
MGI:97297 (MGI:4452597|PMID:20026598)
RGD
PMID:20026598
MGI:4452597
NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
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Tmem100
transmembrane protein 100
acts_upstream_of_or_within
ISO
MGI:5432904 (MGI:5613881|PMID:25318679)
RGD
PMID:25318679
MGI:5613881
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
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Aplnr
apelin receptor
involved_in
ISO
(MGI:5584055|PMID:23603510)
RGD
PMID:23603510
MGI:5584055
NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
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Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:3640731|PMID:16730346)
Ensembl RGD
PMID:16730346
GO_REF:0000107 MGI:3640731
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Bmp5
bone morphogenetic protein 5
involved_in
ISO
UniProtKB:P23359 (MGI:1332253|PMID:10079236)
RGD
PMID:10079236
MGI:1332253
NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
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Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P49003 (MGI:1332253|PMID:10079236)
RGD
PMID:10079236
MGI:1332253
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
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Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
(MGI:3611958|PMID:16314491)
RGD
PMID:16314491
MGI:3611958
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Robo1
roundabout guidance receptor 1
involved_in
ISO
UniProtKB:Q7TPD3 (MGI:5913048|PMID:25691540)
RGD
PMID:25691540
MGI:5913048
NCBI chr11:10,580,863...11,621,672
Ensembl chr11:10,580,908...11,620,203
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Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (MGI:5913048|PMID:25691540)
RGD
PMID:25691540
MGI:5913048
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
G
Tbx2
T-box transcription factor 2
involved_in
ISO
(PMID:22130515)
RGD
PMID:22130515
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
ISO
(MGI:3604925|PMID:15843409), (MGI:5299248|PMID:21983003)
RGD
PMID:15843409 PMID:21983003
MGI:3604925 MGI:5299248
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
G
Tbx3
T-box transcription factor 3
involved_in
ISO
(PMID:22130515)
RGD
PMID:22130515
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
G
Acvr1
activin A receptor type 1
involved_in
ISO
(MGI:3610266|PMID:16140292)
RGD
PMID:16140292
MGI:3610266
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Cplane2
ciliogenesis and planar polarity effector complex subunit 2
acts_upstream_of_or_within
ISO
MGI:6887373 (MGI:6107986|PMID:29038301)
RGD
PMID:29038301
MGI:6107986
NCBI chr 5:153,515,507...153,516,455
Ensembl chr 5:153,515,376...153,522,508
G
Gata5
GATA binding protein 5
involved_in
ISO
(MGI:5286818|PMID:21633169)
RGD
PMID:21633169
MGI:5286818
NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3609313|PMID:11390347)
RGD
PMID:11390347
MGI:3609313
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(MGI:4821522|PMID:20652948)
RGD
PMID:20652948
MGI:4821522
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Acvr1
activin A receptor type 1
involved_in
ISO
(MGI:3610266|PMID:16140292)
RGD
PMID:16140292
MGI:3610266
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Acvrl1
activin A receptor like type 1
involved_in
ISO
(MGI:2674189|PMID:12941632)
RGD
PMID:12941632
MGI:2674189
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Adamts5
ADAM metallopeptidase with thrombospondin type 1 motif, 5
involved_in
ISO
UniProtKB:Q62432 (MGI:5693221|PMID:23531444)
RGD
PMID:23531444
MGI:5693221
NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
ISO
(MGI:4837019|PMID:20890042) MGI:3583785 (MGI:3611958|PMID:16314491)
RGD
PMID:16314491 PMID:20890042
MGI:3611958 MGI:4837019
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(MGI:2175930|PMID:11854453), (MGI:3040576|PMID:15073157)
RGD
PMID:11854453 PMID:15073157
MGI:2175930 MGI:3040576
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Eng
endoglin
involved_in
ISO
(MGI:2674189|PMID:12941632), (MGI:4368063|PMID:19703439)
RGD
PMID:12941632 PMID:19703439
MGI:2674189 MGI:4368063
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO
UniProtKB:Q9WV93 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Isl1
ISL LIM homeobox 1
involved_in
ISO
UniProtKB:Q02248 (MGI:3829137|PMID:17519333)
RGD
PMID:17519333
MGI:3829137
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
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Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO
MGI:107934|MGI:2385439 (MGI:5440773|PMID:22821713)
RGD
PMID:22821713
MGI:5440773
NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
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Mdm4
MDM4 regulator of p53
acts_upstream_of_or_within
ISO
MGI:96952 (MGI:5440773|PMID:22821713)
RGD
PMID:22821713
MGI:5440773
NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226
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Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (MGI:3783944|PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107 MGI:3783944
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Nos3
nitric oxide synthase 3
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q01705 (MGI:6158784|PMID:27107132)
Ensembl RGD
PMID:27107132
GO_REF:0000107 MGI:6158784
NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
G
Notch1
notch receptor 1
involved_in
ISO
UniProtKB:P70313 (MGI:3027664|PMID:14701881), (MGI:6158784|PMID:27107132)
RGD
PMID:14701881 PMID:27107132
MGI:3027664 MGI:6158784
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Smad2
SMAD family member 2
involved_in
ISO
UniProtKB:Q9R001 (MGI:5693221|PMID:23531444)
RGD
PMID:23531444
MGI:5693221
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2385468|MGI:2450311 (MGI:3709802|PMID:11951052)
UniProt RGD
PMID:11951052
GO_REF:0000024 MGI:3709802
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tbx2
T-box transcription factor 2
involved_in
ISO
(MGI:3487212|PMID:15459098)
RGD
PMID:15459098
MGI:3487212
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
ISO
(MGI:3579960|PMID:15901664)
RGD
PMID:15901664
MGI:3579960
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3609313|PMID:11390347), (MGI:3830400|PMID:19161227)
RGD
PMID:11390347 PMID:19161227
MGI:3609313 MGI:3830400
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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Twist1
twist family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857265 (MGI:3805126|PMID:18539270)
RGD
PMID:18539270
MGI:3805126
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Acvrl1
activin A receptor like type 1
NOT|involved_in
ISO
(MGI:2674189|PMID:12941632)
RGD
PMID:12941632
MGI:2674189
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Eng
endoglin
NOT|involved_in
ISO
(MGI:2674189|PMID:12941632)
RGD
PMID:12941632
MGI:2674189
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Has2
hyaluronan synthase 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:1861536|PMID:10930438)
UniProt RGD
PMID:10930438
GO_REF:0000024 MGI:1861536
NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
G
Efna1
ephrin A1
involved_in
ISO
(MGI:4847981|PMID:20960543)
RGD
PMID:20960543
MGI:4847981
NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
G
Erg
ETS transcription factor ERG
acts_upstream_of_or_within
ISO
MGI:5443838 (MGI:5442628|PMID:22932696)
RGD
PMID:22932696
MGI:5442628
NCBI chr11:34,678,614...34,900,951
Ensembl chr11:34,678,618...34,845,871
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1341884 (MGI:3530185|PMID:15680351)
RGD
PMID:15680351
MGI:3530185
NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO
MGI:1341800 (MGI:3530185|PMID:15680351)
RGD
PMID:15680351
MGI:3530185
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Akna
AT-hook transcription factor
involved_in
ISO IBA
(MGI:6294240|PMID:30787442) PMID:21873635
RGD
PMID:30787442 PMID:21873635
MGI:6294240 , RGD:13792537
NCBI chr 5:76,777,415...76,824,380
Ensembl chr 5:76,777,415...76,816,017
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:15110716) (PMID:18184661) (MGI:3640731|PMID:16730346), (MGI:5299248|PMID:21983003)
UniProt RGD
PMID:15110716 PMID:16730346 PMID:18184661 PMID:21983003
GO_REF:0000024 MGI:3640731 MGI:5299248
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Cul7
cullin 7
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20139075)
UniProt Ensembl RGD
PMID:20139075
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:14,319,102...14,333,035
Ensembl chr 9:14,319,108...14,332,741
G
Dact3
dishevelled-binding antagonist of beta-catenin 3
acts_upstream_of
ISO
MGI:5515616 (MGI:5503293|PMID:23580654)
RGD
PMID:23580654
MGI:5503293
NCBI chr 1:77,546,900...77,558,631
Ensembl chr 1:77,546,900...77,558,630
G
Ddx17
DEAD-box helicase 17
involved_in
ISO
(PMID:24910439)
RGD
PMID:24910439
NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
G
Ddx5
DEAD-box helicase 5
involved_in
ISO
(PMID:24910439)
RGD
PMID:24910439
NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
G
Dlg5
discs large MAGUK scaffold protein 5
involved_in
ISO
(PMID:28169360)
RGD
PMID:28169360
NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
G
Epb41l5
erythrocyte membrane protein band 4.1 like 5
involved_in
ISO
MGI:3578147 (MGI:3714667|PMID:17507402), (MGI:3821807|PMID:18794329)
RGD
PMID:17507402 PMID:18794329
MGI:3714667 MGI:3821807
NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
G
Fam83d
family with sequence similarity 83, member D
involved_in
ISO
(PMID:24344117)
RGD
PMID:24344117
NCBI chr 3:147,421,941...147,441,211
Ensembl chr 3:147,421,908...147,441,192
G
Fgfr1
Fibroblast growth factor receptor 1
involved_in
ISO
(PMID:26451614)
RGD
PMID:26451614
NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
G
Fgfr2
fibroblast growth factor receptor 2
IDA
RGD
PMID:7803853
RGD:632663
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Flna
filamin A
acts_upstream_of_or_within
ISO
MGI:1923816 (MGI:5085960|PMID:21709252)
RGD
PMID:21709252
MGI:5085960
NCBI chr X:152,007,758...152,034,266
Ensembl chr X:152,007,758...152,031,052
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO IEA ISS
(PMID:15448698) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:15448698
GO_REF:0000024 GO_REF:0000107
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
ISO IEA
(MGI:3772289|PMID:18037992) GO_REF:0000107
RGD Ensembl
PMID:18037992
GO_REF:0000107 MGI:3772289
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hmga2
high mobility group AT-hook 2
involved_in
ISO ISS
(PMID:18832382) GO_REF:0000024
RGD UniProt
PMID:18832382
GO_REF:0000024
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
G
Hnrnpab
heterogeneous nuclear ribonucleoprotein A/B
involved_in
ISO ISS
(MGI:3698386|PMID:17273560) GO_REF:0000024
RGD HGNC-UCL
PMID:17273560
GO_REF:0000024 MGI:3698386
NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344
G
Lef1
lymphoid enhancer binding factor 1
involved_in
ISO
(MGI:2683382|PMID:14691138)
RGD
PMID:14691138
MGI:2683382
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Lims1
LIM zinc finger domain containing 1
NOT|involved_in
ISO
(PMID:20926685)
RGD
PMID:20926685
NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
G
Loxl2
lysyl oxidase-like 2
involved_in
ISO ISS IEA
(PMID:16096638) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:16096638
GO_REF:0000024 GO_REF:0000107
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
G
Loxl3
lysyl oxidase-like 3
involved_in
ISO
(PMID:16096638)
RGD
PMID:16096638
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
G
Mir326
microRNA 326
involved_in
ISO
(PMID:24279830)
RGD
PMID:24279830
NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
G
Msx1
msh homeobox 1
involved_in
ISO
(MGI:4418636|PMID:11023873)
RGD
PMID:11023873
MGI:4418636
NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
G
Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181762 (MGI:3053252|PMID:15339668)
RGD
PMID:15339668
MGI:3053252
NCBI chr18:74,046,421...74,156,041
Ensembl chr18:74,046,904...74,156,028
G
Nog
noggin
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:3783944|PMID:17218603) GO_REF:0000024
Ensembl RGD UniProt
PMID:17218603
GO_REF:0000024 GO_REF:0000107 MGI:3783944
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Notch1
notch receptor 1
involved_in acts_upstream_of_or_within
ISO
(PMID:17984306) MGI:1857230 (MGI:3027664|PMID:14701881)
RGD
PMID:14701881 PMID:17984306
MGI:3027664
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Notch4
notch receptor 4
involved_in
ISO
(PMID:17984306)
RGD
PMID:17984306
NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
G
Ppp3r1
protein phosphatase 3, regulatory subunit B, alpha
acts_upstream_of_or_within
ISO
MGI:3044031 (MGI:3053252|PMID:15339668)
RGD
PMID:15339668
MGI:3053252
NCBI chr14:91,556,743...91,606,230
Ensembl chr14:91,604,121...91,606,907
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:1857411 (MGI:3027664|PMID:14701881)
RGD
PMID:14701881
MGI:3027664
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Rflnb
refilin B
acts_upstream_of_or_within
ISO
MGI:95556 (MGI:5085960|PMID:21709252)
RGD
PMID:21709252
MGI:5085960
NCBI chr10:60,893,693...60,899,970
Ensembl chr10:60,893,713...60,899,976
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P70336 (MGI:3513217|PMID:15464581)
Ensembl RGD
PMID:15464581
GO_REF:0000107 MGI:3513217
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
ISO
UniProtKB:P70335 (MGI:3513217|PMID:15464581)
RGD
PMID:15464581
MGI:3513217
NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
G
Sdhaf2
succinate dehydrogenase complex assembly factor 2
acts_upstream_of
ISO
(MGI:5529200|PMID:23983127)
RGD
PMID:23983127
MGI:5529200
NCBI chr 1:207,139,070...207,167,830
Ensembl chr 1:207,139,112...207,168,616
G
Slc39a10
solute carrier family 39 member 10
involved_in
ISO
(PMID:27274087)
RGD
PMID:27274087
NCBI chr 9:54,836,841...54,960,325
Ensembl chr 9:54,876,141...54,960,325
G
Smad4
SMAD family member 4
involved_in
ISO
(PMID:30741461)
RGD
PMID:30741461
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Snai1
snail family transcriptional repressor 1
involved_in
TAS ISO
(MGI:1352954|PMID:10655586), (MGI:2153695|PMID:11689706), (MGI:5294539|PMID:18832382) (PMID:16096638)
RGD
PMID:10655586 PMID:11689706 PMID:16096638 PMID:18832382 PMID:15155580
MGI:1352954 MGI:2153695 MGI:5294539 , RGD:1302246
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
G
Snai2
snail family transcriptional repressor 2
involved_in acts_upstream_of_or_within
ISO
(PMID:17984306), (PMID:9182671) MGI:2447175 (MGI:3762325|PMID:17916597) (MGI:892810|PMID:9182671)
RGD
PMID:9182671 PMID:17916597 PMID:17984306
MGI:3762325 MGI:892810
NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2429649 (MGI:3041362|PMID:15096597)
UniProt RGD
PMID:15096597
GO_REF:0000024 MGI:3041362
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Sp6
Sp6 transcription factor
involved_in
ISO
(MGI:6305509|PMID:30504223)
RGD
PMID:30504223
MGI:6305509
NCBI chr10:82,005,518...82,009,699
Ensembl chr10:82,005,294...82,011,013
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Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within involved_in
IDA ISO
(PMID:29529050) (PMID:25893292)
RGD
PMID:25893292 PMID:29529050 PMID:10504497
RGD:1578678
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10092230), (PMID:18223299)
UniProt RGD
PMID:10092230 PMID:18223299
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO
(PMID:15761148)
RGD
PMID:15761148
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
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Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:18184661)
RGD
PMID:18184661
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
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Trim28
tripartite motif-containing 28
involved_in
ISS ISO
GO_REF:0000024 (MGI:3698386|PMID:17273560)
HGNC-UCL RGD
PMID:17273560
GO_REF:0000024 MGI:3698386
NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
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Trip10
thyroid hormone receptor interactor 10
IMP
RGD
PMID:23819628
RGD:11535143
NCBI chr 9:2,133,085...2,147,795
Ensembl chr 9:2,133,671...2,147,799
G
Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO
MGI:98958 (MGI:5634837|PMID:25813538)
RGD
PMID:25813538
MGI:5634837
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
G
Wnt4
Wnt family member 4
involved_in
ISO IEA
(PMID:12841867) GO_REF:0000107
RGD Ensembl
PMID:12841867
GO_REF:0000107
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
G
Wnt5a
Wnt family member 5A
involved_in
ISO
(PMID:12841867)
RGD
PMID:12841867
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
G
Mir21
microRNA 21
involved_in
ISO
(PMID:23441172)
RGD
PMID:23441172
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
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Pdcd4
programmed cell death 4
involved_in
IGI
PMID:23441172
BHF-UCL
PMID:23441172
RGD:10400865
NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
G
Spry1
sprouty RTK signaling antagonist 1
involved_in
IGI
PMID:23441172
BHF-UCL
PMID:23441172
RGD:10400865
NCBI chr 2:120,557,276...120,561,918
Ensembl chr 2:120,556,706...120,566,189
G
Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(MGI:3814273|PMID:18924235)
RGD
PMID:18924235
MGI:3814273
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Eng
endoglin
involved_in
ISO
(MGI:4368063|PMID:19703439)
RGD
PMID:19703439
MGI:4368063
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Fgf8
fibroblast growth factor 8
involved_in acts_upstream_of_or_within
ISO
(MGI:4359139|PMID:19509466) (MGI:5002778|PMID:21364285)
RGD
PMID:19509466 PMID:21364285
MGI:4359139 MGI:5002778
NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1860511 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
acts_upstream_of_or_within
ISO
MGI:1341800 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
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Msx1
msh homeobox 1
acts_upstream_of_or_within
ISO
MGI:97169 (MGI:3810851|PMID:18667074)
RGD
PMID:18667074
MGI:3810851
NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966
G
Msx2
msh homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97168 (MGI:3810851|PMID:18667074)
Ensembl RGD
PMID:18667074
GO_REF:0000107 MGI:3810851
NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
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Notch1
notch receptor 1
involved_in
ISO
(MGI:3027664|PMID:14701881)
RGD
PMID:14701881
MGI:3027664
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(MGI:3027664|PMID:14701881)
RGD
PMID:14701881
MGI:3027664
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
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Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:4946551|PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107 MGI:4946551
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Snai1
snail family transcriptional repressor 1
involved_in
ISO
UniProtKB:Q3UZ96 (MGI:3808643|PMID:18663143)
RGD
PMID:18663143
MGI:3808643
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
G
Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within
ISO
MGI:2447175 (MGI:3808643|PMID:18663143)
RGD
PMID:18663143
MGI:3808643
NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
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Tmem100
transmembrane protein 100
acts_upstream_of_or_within
ISO
MGI:5432904 (MGI:5613881|PMID:25318679)
RGD
PMID:25318679
MGI:5613881
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
G
Amh
anti-Mullerian hormone
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 7:8,906,776...8,909,184
Ensembl chr 7:8,906,836...8,909,282
G
Tspy1
testis specific protein, Y-linked 1
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(MGI:3801267|PMID:17050629)
RGD
PMID:17050629
MGI:3801267
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:2158343 (MGI:3702797|PMID:16943278)
RGD
PMID:16943278
MGI:3702797
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Fendrr
FOXF1 adjacent non-coding developmental regulatory RNA
acts_upstream_of_or_within
ISO
MGI:5470087 (MGI:5462100|PMID:23369715)
RGD
PMID:23369715
MGI:5462100
NCBI chr19:49,127,225...49,152,779
Ensembl chr19:49,121,214...49,153,240
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(MGI:1339460|PMID:10393122)
RGD
PMID:10393122
MGI:1339460
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
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Tead1
TEA domain transcription factor 1
acts_upstream_of_or_within
ISO
MGI:103262|MGI:104904 (MGI:3773640|PMID:18332127)
RGD
PMID:18332127
MGI:3773640
NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
G
Tead2
TEA domain transcription factor 2
acts_upstream_of_or_within
ISO
MGI:101876|MGI:103262 (MGI:3773640|PMID:18332127)
RGD
PMID:18332127
MGI:3773640
NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186
G
Yap1
Yes1 associated transcriptional regulator
acts_upstream_of_or_within
ISO
MGI:101876|MGI:104904 (MGI:3773640|PMID:18332127)
RGD
PMID:18332127
MGI:3773640
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Foxf1
forkhead box F1
acts_upstream_of_or_within
ISO
MGI:1929432 (MGI:1928688|PMID:11124112)
RGD
PMID:11124112
MGI:1928688
NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Taf10
TATA-box binding protein associated factor 10
involved_in
ISO
MGI:3606185 (MGI:5918349|PMID:28893950)
RGD
PMID:28893950
MGI:5918349
NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2148567 (MGI:3801531|PMID:18533146) GO_REF:0000107
RGD Ensembl
PMID:18533146
GO_REF:0000107 MGI:3801531
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dppa2
developmental pluripotency-associated 2
acts_upstream_of_or_within
ISO
MGI:2157525|MGI:5298642 (MGI:5298147|PMID:21896782)
RGD
PMID:21896782
MGI:5298147
NCBI chr11:52,549,024...52,556,740
G
Dppa4
developmental pluripotency associated 4
acts_upstream_of_or_within
ISO
MGI:2157523|MGI:5298639 (MGI:5298147|PMID:21896782)
RGD
PMID:21896782
MGI:5298147
NCBI chr11:52,568,939...52,578,800
Ensembl chr11:52,570,286...52,578,797
G
Fgf9
fibroblast growth factor 9
acts_upstream_of_or_within
ISO
MGI:2135961 (MGI:3801531|PMID:18533146)
RGD
PMID:18533146
MGI:3801531
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:95523 (MGI:3801531|PMID:18533146)
RGD
PMID:18533146
MGI:3801531
NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3629660|MGI:95522 (MGI:3688953|PMID:16989802), (MGI:3801531|PMID:18533146)
RGD
PMID:16989802 PMID:18533146
MGI:3688953 MGI:3801531
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Hoxa5
homeo box A5
acts_upstream_of_or_within
ISO
MGI:2150397 (MGI:1195049|PMID:9441679)
RGD
PMID:9441679
MGI:1195049
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
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Ptk7
protein tyrosine kinase 7
acts_upstream_of_or_within
ISO
MGI:3640803 (MGI:4830023|PMID:20704721)
RGD
PMID:20704721
MGI:4830023
NCBI chr 9:14,352,155...14,418,494
Ensembl chr 9:14,351,202...14,418,494
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl RGD
PMID:9731532
GO_REF:0000107 MGI:1277744
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Wnt11
Wnt family member 11
involved_in
ISO
(PMID:9757009)
RGD
PMID:9757009
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
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Wnt7b
Wnt family member 7B
acts_upstream_of_or_within
ISO
MGI:3793280 (MGI:3788965|PMID:18367557)
RGD
PMID:18367557
MGI:3788965
NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
G
Alx1
ALX homeobox 1
acts_upstream_of_or_within
ISO
MGI:1857553 (MGI:81193|PMID:8673125)
RGD
PMID:8673125
MGI:81193
NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220
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Bcl2
BCL2, apoptosis regulator
acts_upstream_of_or_within
ISO
MGI:2156165 (MGI:81253|PMID:8623928)
RGD
PMID:8623928
MGI:81253
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Foxc1
forkhead box C1
involved_in
ISO
(MGI:5569870|PMID:24590069)
RGD
PMID:24590069
MGI:5569870
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO
UniProtKB:Q9WV93 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Notch1
notch receptor 1
involved_in
ISO
(MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tbx20
T-box transcription factor 20
involved_in
ISO
(MGI:5299248|PMID:21983003)
RGD
PMID:21983003
MGI:5299248
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
G
Bmp2
bone morphogenetic protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:9693150)
UniProt RGD
PMID:9693150
GO_REF:0000024
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
(PMID:9693150)
RGD
PMID:9693150
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:95523 (MGI:3620275|PMID:16442091)
RGD
PMID:16442091
MGI:3620275
NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:95522 (MGI:3620275|PMID:16442091)
RGD
PMID:16442091
MGI:3620275
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO
MGI:1857869 (MGI:1261705|PMID:9635428)
RGD
PMID:9635428
MGI:1261705
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Hmga2
high mobility group AT-hook 2
involved_in
ISO ISS
(PMID:17624332), (PMID:7606786) GO_REF:0000024
RGD UniProt
PMID:7606786 PMID:17624332
GO_REF:0000024
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
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Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182246 (MGI:85032|PMID:9000074)
RGD
PMID:9000074
MGI:85032
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Nog
noggin
acts_upstream_of_or_within
IMP ISO
MGI:1862000 (MGI:3771245|PMID:18028901)
RGD
PMID:18028901 PMID:21238590
MGI:3771245 , RGD:12801486
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Plaur
plasminogen activator, urokinase receptor
IMP
RGD
PMID:11798065
RGD:729659
NCBI chr 1:80,053,441...80,068,384
Ensembl chr 1:80,050,324...80,068,595
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Wwtr1
WW domain containing transcription regulator 1
acts_upstream_of_or_within
ISO
MGI:3759999 (MGI:3758168|PMID:17636028)
RGD
PMID:17636028
MGI:3758168
NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
G
Zfp64
zinc finger protein 64
involved_in
ISO
(PMID:18430783)
RGD
PMID:18430783
NCBI chr 3:157,666,819...157,695,774
Ensembl chr 3:157,633,211...157,695,809
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(MGI:4834113|PMID:20404326)
RGD
PMID:20404326
MGI:4834113
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Mir222
microRNA 222
IMP
RGD
PMID:31691506
RGD:151893486
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Ranbp3l
RAN binding protein 3-like
involved_in
ISO
(MGI:5883200|PMID:25755279)
RGD
PMID:25755279
MGI:5883200
NCBI chr 2:58,057,887...58,113,158
Ensembl chr 2:58,058,263...58,113,172
G
Timp3
TIMP metallopeptidase inhibitor 3
IMP
RGD
PMID:31691506
RGD:151893486
NCBI chr 7:17,520,827...17,571,871
Ensembl chr 7:17,521,919...17,571,839
G
Amer1
APC membrane recruitment protein 1
acts_upstream_of_or_within
ISO
MGI:2446599|MGI:5086003 (MGI:5013668|PMID:21571217)
RGD
PMID:21571217
MGI:5013668
NCBI chr X:60,300,595...60,316,480
Ensembl chr X:60,295,751...60,316,440
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:3710018|PMID:17442697)
Ensembl RGD
PMID:17442697
GO_REF:0000107 MGI:3710018
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Six2
SIX homeobox 2
involved_in
ISO
(MGI:3691408|PMID:17036046)
RGD
PMID:17036046
MGI:3691408
NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:95523 (MGI:3688953|PMID:16989802)
RGD
PMID:16989802
MGI:3688953
NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:1099809 (MGI:3688953|PMID:16989802)
RGD
PMID:16989802
MGI:3688953
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO
(MGI:3710018|PMID:17442697)
RGD
PMID:17442697
MGI:3710018
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Chrd
chordin
involved_in
ISO
(MGI:2178923|PMID:11969257)
RGD
PMID:11969257
MGI:2178923
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Acta1
actin, alpha 1, skeletal muscle
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr19:51,883,713...51,886,725
Ensembl chr19:51,883,715...51,886,742
G
Acta2
actin alpha 2, smooth muscle
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
G
Actc1
actin, alpha, cardiac muscle 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
G
Actg2
actin gamma 2, smooth muscle
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 4:116,021,832...116,046,475
Ensembl chr 4:116,021,832...116,046,465
G
Foxf1
forkhead box F1
acts_upstream_of_or_within
ISO
MGI:2179135 (MGI:3709924|PMID:17261592)
RGD
PMID:17261592
MGI:3709924
NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Eomes
eomesodermin
involved_in
ISO
(MGI:3772748|PMID:18171685)
RGD
PMID:18171685
MGI:3772748
NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
G
Tasor
transcription activation suppressor
involved_in
ISO
(MGI:6109647|PMID:28839193)
RGD
PMID:28839193
MGI:6109647
NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292
G
Wnt5a
Wnt family member 5A
acts_upstream_of_or_within
ISO
MGI:101948 (MGI:5634837|PMID:25813538)
RGD
PMID:25813538
MGI:5634837
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3826342|PMID:18835385)
UniProt RGD
PMID:18835385
GO_REF:0000024 MGI:3826342
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
G
Pkd2
polycystin 2, transient receptor potential cation channel
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3697513|PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024 MGI:3697513
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:3663200|PMID:16368682)
UniProt RGD
PMID:16368682
GO_REF:0000024 MGI:3663200
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
G
Tcf21
transcription factor 21
involved_in
ISS ISO
GO_REF:0000024 (MGI:2651771|PMID:12619136)
UniProt RGD
PMID:12619136
GO_REF:0000024 MGI:2651771
NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P97471 (MGI:3623046|PMID:15342483)
RGD
PMID:15342483
MGI:3623046
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (MGI:2388350|PMID:12399320)
Ensembl UniProt RGD
PMID:12399320
GO_REF:0000024 GO_REF:0000107 MGI:2388350
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISO ISS
(MGI:5009359|PMID:20171952) GO_REF:0000024
RGD UniProt
PMID:20171952
GO_REF:0000024 MGI:5009359
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5009359|PMID:20171952)
UniProt RGD
PMID:20171952
GO_REF:0000024 MGI:5009359
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
G
Pdgfrb
platelet derived growth factor receptor beta
involved_in
IEP
PMID:10734101
UniProt
PMID:10734101
RGD:8554631
NCBI chr18:54,500,002...54,538,843
Ensembl chr18:54,499,964...54,538,843
G
Pkd2
polycystin 2, transient receptor potential cation channel
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
G
Six1
SIX homeobox 1
involved_in
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Six4
SIX homeobox 4
involved_in
ISO
(MGI:5009396|PMID:17300925)
RGD
PMID:17300925
MGI:5009396
NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
G
Wt1
WT1 transcription factor
involved_in
ISS ISO
GO_REF:0000024 (MGI:62488|PMID:8395349)
UniProt RGD
PMID:8395349
GO_REF:0000024 MGI:62488
NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P97471 (MGI:3623046|PMID:15342483)
RGD
PMID:15342483
MGI:3623046
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3697513|PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024 MGI:3697513
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:3623046|PMID:15342483)
Ensembl RGD
PMID:15342483
GO_REF:0000107 MGI:3623046
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Adipor1
adiponectin receptor 1
involved_in
ISO
(PMID:23776679)
RGD
PMID:23776679
NCBI chr13:45,859,461...45,879,248
Ensembl chr13:45,859,533...45,879,241
G
Dab2ip
DAB2 interacting protein
involved_in
ISO ISS
(PMID:20080667), (PMID:20154697) GO_REF:0000024
RGD UniProt
PMID:20080667 PMID:20154697
GO_REF:0000024
NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
G
Dact3
dishevelled-binding antagonist of beta-catenin 3
acts_upstream_of_or_within
ISO
MGI:5515616 (MGI:5503293|PMID:23580654)
RGD
PMID:23580654
MGI:5503293
NCBI chr 1:77,546,900...77,558,631
Ensembl chr 1:77,546,900...77,558,630
G
Efna1
ephrin A1
involved_in
ISO
(MGI:4847981|PMID:20960543)
RGD
PMID:20960543
MGI:4847981
NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
G
Epha4
Eph receptor A4
involved_in
ISO
(PMID:29093007)
RGD
PMID:29093007
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Foxa1
forkhead box A1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20160041)
Ensembl RGD
PMID:20160041
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Foxa2
forkhead box A2
involved_in
IEA ISO
GO_REF:0000107 (PMID:20160041)
Ensembl RGD
PMID:20160041
GO_REF:0000107
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Gata3
GATA binding protein 3
acts_upstream_of
ISO
(PMID:26451614)
RGD
PMID:26451614
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Hpn
hepsin
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:19843851)
UniProt RGD
PMID:19843851 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
G
Il17rd
interleukin 17 receptor D
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr16:2,228,467...2,295,126
Ensembl chr16:2,228,287...2,292,556
G
Ldlrad4
low density lipoprotein receptor class A domain containing 4
involved_in
ISO
(PMID:24627487)
RGD
PMID:24627487
NCBI chr18:61,519,253...61,848,403
Ensembl chr18:61,521,428...61,843,238
G
Mad2l2
mitotic arrest deficient 2 like 2
involved_in
ISO
(PMID:19443654)
RGD
PMID:19443654
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
G
Mark1
microtubule affinity regulating kinase 1
involved_in
ISO
(PMID:31281935)
RGD
PMID:31281935
NCBI chr13:96,450,189...96,555,304
Ensembl chr13:96,451,487...96,555,173
G
Mir130a
microRNA 130a
acts_upstream_of
ISO
UniProtKB:Q13485 (PMID:30741461)
RGD
PMID:30741461
NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629
G
Mir144
microRNA 144
acts_upstream_of
ISO
(PMID:27785072)
RGD
PMID:27785072
NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
G
Mir145
microRNA 145
acts_upstream_of
ISO
(PMID:24384875)
RGD
PMID:24384875
NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
G
Mir29b1
microRNA 29b-1
involved_in
ISO
(PMID:25032858)
RGD
PMID:25032858
NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
G
Mir29b2
microRNA 29b-2
involved_in
ISO
(PMID:25032858)
RGD
PMID:25032858
NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
G
Mir31
microRNA 31
IMP
RGD
PMID:23270756
RGD:13210526
NCBI chr 5:103,599,038...103,599,143
G
Nkx2-1
NK2 homeobox 1
involved_in
ISO IEA
(PMID:19293183) GO_REF:0000107
RGD Ensembl
PMID:19293183
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Ovol2
ovo-like zinc finger 2
involved_in
ISO
(MGI:5574425|PMID:24735879), (MGI:6284898|PMID:28455959)
RGD
PMID:24735879 PMID:28455959
MGI:5574425 MGI:6284898
NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359
G
Ppp2ca
protein phosphatase 2 catalytic subunit alpha
involved_in
ISO
(PMID:20080667)
RGD
PMID:20080667
NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:27919618)
RGD
PMID:27919618
NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
G
Sdhaf2
succinate dehydrogenase complex assembly factor 2
acts_upstream_of_or_within
ISO
(MGI:5529200|PMID:23983127) (PMID:23983127)
RGD
PMID:23983127
MGI:5529200
NCBI chr 1:207,139,070...207,167,830
Ensembl chr 1:207,139,112...207,168,616
G
Sfrp1
secreted frizzled-related protein 1
involved_in
ISO IEA
(PMID:19095296) GO_REF:0000107
RGD Ensembl
PMID:19095296
GO_REF:0000107
NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO
(PMID:19095296)
RGD
PMID:19095296
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Spred1
sprouty-related, EVH1 domain containing 1
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718
G
Spred2
sprouty-related, EVH1 domain containing 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6414689|PMID:25576668)
UniProt RGD
PMID:25576668
GO_REF:0000024 MGI:6414689
NCBI chr14:94,226,312...94,248,162
Ensembl chr14:94,148,837...94,249,162
G
Spred3
sprouty-related, EVH1 domain containing 3
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 1:84,458,779...84,470,425
Ensembl chr 1:84,459,314...84,470,249
G
Spry1
sprouty RTK signaling antagonist 1
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 2:120,557,276...120,561,918
Ensembl chr 2:120,556,706...120,566,189
G
Spry2
sprouty RTK signaling antagonist 2
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr15:82,692,312...82,697,408
Ensembl chr15:82,692,143...82,698,009
G
Tgfbr3
transforming growth factor beta receptor 3
acts_upstream_of_or_within
ISO
(MGI:3762085|PMID:17823118)
RGD
PMID:17823118
MGI:3762085
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
G
Trim62
tripartite motif-containing 62
acts_upstream_of_or_within
ISO
MGI:5538538 (MGI:5585203|PMID:24890125)
RGD
PMID:24890125
MGI:5585203
NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915
G
Tsc2
TSC complex subunit 2
IMP
RGD
PMID:20813961
RGD:11568680
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Usf3
upstream transcription factor family member 3
involved_in
ISO IBA
(PMID:28011713) PMID:21873635
RGD
PMID:28011713 PMID:21873635
RGD:13792537
NCBI chr11:56,470,738...56,529,736
Ensembl chr11:56,476,122...56,529,884
G
Vasn
vasorin
involved_in
ISO
(PMID:21170088)
RGD
PMID:21170088
NCBI chr10:10,917,750...10,928,259
Ensembl chr10:10,917,605...10,928,357
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(MGI:5502250|PMID:23863481)
RGD
PMID:23863481
MGI:5502250
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Znf750
zinc finger protein 750
involved_in
ISO
(PMID:32042337)
RGD
PMID:32042337
NCBI chr10:106,772,162...106,781,186
Ensembl chr10:106,772,669...106,781,200
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (MGI:3783944|PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107 MGI:3783944
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Fuz
fuzzy planar cell polarity protein
involved_in
ISS ISO
GO_REF:0000024 (MGI:5498583|PMID:23806618)
UniProt RGD
PMID:23806618
GO_REF:0000024 MGI:5498583
NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530
G
Cer1
cerberus 1, DAN family BMP antagonist
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783
G
Dand5
DAN domain BMP antagonist family member 5
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
G
Foxd1
forkhead box D1
involved_in
IEA ISO
GO_REF:0000107 (MGI:3525902|PMID:15634693)
Ensembl RGD
PMID:15634693
GO_REF:0000107 MGI:3525902
NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P97471 (MGI:3623046|PMID:15342483)
RGD
PMID:15342483
MGI:3623046
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:3623046|PMID:15342483)
Ensembl RGD
PMID:15342483
GO_REF:0000107 MGI:3623046
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Aldh1a2
aldehyde dehydrogenase 1 family, member A2
acts_upstream_of_or_within
ISO
MGI:1096359|MGI:1857891|MGI:2679699 (MGI:3612223|PMID:16368932), (MGI:3703483|PMID:17067568)
RGD
PMID:16368932 PMID:17067568
MGI:3612223 MGI:3703483
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
(MGI:4366654|PMID:19793887)
RGD
PMID:19793887
MGI:4366654
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Cdh2
cadherin 2
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:6216737|PMID:26750727) GO_REF:0000024
Ensembl RGD UniProt
PMID:26750727
GO_REF:0000024 GO_REF:0000107 MGI:6216737
NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
G
Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:2679699 (MGI:3703483|PMID:17067568)
RGD
PMID:17067568
MGI:3703483
NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204
G
Cyp26c1
cytochrome P450, family 26, subfamily C, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:1096359 (MGI:3703483|PMID:17067568)
RGD
PMID:17067568
MGI:3703483
NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842
G
Edn1
endothelin 1
acts_upstream_of_or_within
ISO
MGI:1857637 (MGI:1277800|PMID:9671575), (MGI:3510064|PMID:15327783)
RGD
PMID:9671575 PMID:15327783
MGI:1277800 MGI:3510064
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
acts_upstream_of_or_within
ISO
MGI:1857473 (MGI:1201717|PMID:9449664), (MGI:3056210|PMID:15306564), (MGI:3510064|PMID:15327783)
RGD
PMID:9449664 PMID:15306564 PMID:15327783
MGI:1201717 MGI:3056210 MGI:3510064
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Fam172a
family with sequence similarity 172, member A
involved_in
ISO
(MGI:6113784|PMID:29311329)
RGD
PMID:29311329
MGI:6113784
NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
G
Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO
MGI:1347481 (MGI:3701735|PMID:16839542)
RGD
PMID:16839542
MGI:3701735
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (MGI:3701735|PMID:16839542)
RGD
PMID:16839542
MGI:3701735
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
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Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_or_within
ISO
MGI:1857639 (MGI:1277800|PMID:9671575)
RGD
PMID:9671575
MGI:1277800
NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
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Kbtbd8
kelch repeat and BTB domain containing 8
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:26399832) GO_REF:0000107
UniProt RGD Ensembl
PMID:26399832
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:127,675,967...127,688,785
Ensembl chr 4:127,676,141...127,687,697
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Klhl12
kelch-like family member 12
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:27716508)
UniProt Ensembl RGD
PMID:27716508
GO_REF:0000024 GO_REF:0000107
NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
G
Mapk1
mitogen activated protein kinase 1
acts_upstream_of_or_within
ISO
MGI:1346859 (MGI:3832113|PMID:18952847)
RGD
PMID:18952847
MGI:3832113
NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
G
Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
MGI:1346858 (MGI:3832113|PMID:18952847)
RGD
PMID:18952847
MGI:3832113
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
G
Nolc1
nucleolar and coiled-body phosphoprotein 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:26399832)
UniProt RGD
PMID:26399832
GO_REF:0000024
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
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Pdcd6
programmed cell death 6
involved_in
ISO ISS
(PMID:27716508) GO_REF:0000024
RGD UniProt
PMID:27716508
GO_REF:0000024
NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
G
Pef1
penta-EF hand domain containing 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:27716508)
UniProt RGD
PMID:27716508
GO_REF:0000024
NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
G
Rdh10
retinol dehydrogenase 10
acts_upstream_of_or_within
ISO
(MGI:3709664|PMID:17473173)
RGD
PMID:17473173
MGI:3709664
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
G
Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:12444107)
RGD
PMID:12444107
NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
G
Sox8
SRY-box transcription factor 8
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:3041881 (MGI:3613316|PMID:15691760)
RGD
PMID:15691760
MGI:3613316
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tcof1
treacle ribosome biogenesis factor 1
involved_in
ISO
(PMID:26399832)
RGD
PMID:26399832
NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324
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Tfap2a
transcription factor AP-2 alpha
acts_upstream_of_or_within
ISO
MGI:2176682 (MGI:80519|PMID:8622766)
RGD
PMID:8622766
MGI:80519
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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Edn1
endothelin 1
involved_in
ISO
MGI:1857637 (MGI:5532613|PMID:23933587)
RGD
PMID:23933587
MGI:5532613
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
ISO
MGI:102780|MGI:2687362|MGI:3773698|MGI:4867385 (MGI:3847842|PMID:19185569), (MGI:5532613|PMID:23933587), (MGI:5903136|PMID:28455376)
RGD
PMID:19185569 PMID:23933587 PMID:28455376
MGI:3847842 MGI:5532613 MGI:5903136
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(MGI:5907444|PMID:26295701)
RGD
PMID:26295701
MGI:5907444
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Frzb
frizzled-related protein
involved_in
ISO
(MGI:1349347|PMID:10654605)
RGD
PMID:10654605
MGI:1349347
NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
G
Htr2b
5-hydroxytryptamine receptor 2B
involved_in
ISS ISO
GO_REF:0000024 (MGI:707955|PMID:9165122)
UniProt RGD
PMID:9165122
GO_REF:0000024 MGI:707955
NCBI chr 9:86,735,793...86,756,640
Ensembl chr 9:86,742,102...86,755,108
G
Lrp6
LDL receptor related protein 6
involved_in
ISO
(PMID:11029007)
RGD
PMID:11029007
NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (MGI:5049797|PMID:21610032)
UniProt RGD
PMID:21610032
GO_REF:0000024 MGI:5049797
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
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Otud5
OTU deubiquitinase 5
involved_in
ISO ISS
(PMID:33523931) GO_REF:0000024
RGD UniProt
PMID:33523931
GO_REF:0000024
NCBI chr X:14,626,173...14,659,331
Ensembl chr X:14,626,164...14,659,573
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Rps7
ribosomal protein S7
acts_upstream_of_or_within
ISO
MGI:3043039 (MGI:3056222|PMID:15384171)
RGD
PMID:15384171
MGI:3056222
NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145
G
Six1
SIX homeobox 1
involved_in
ISO
MGI:105923 (MGI:5903136|PMID:28455376)
RGD
PMID:28455376
MGI:5903136
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Smad4
SMAD family member 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:4366654|PMID:19793887)
Ensembl RGD
PMID:19793887
GO_REF:0000107 MGI:4366654
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Wnt10a
Wnt family member 10A
acts_upstream_of_or_within
ISO
(MGI:3712614|PMID:17286598)
RGD
PMID:17286598
MGI:3712614
NCBI chr 9:76,349,931...76,362,400
Ensembl chr 9:76,349,931...76,362,400
G
Zic2
Zic family member 2
acts_upstream_of_or_within
ISO
MGI:1862004 (MGI:3056222|PMID:15384171)
RGD
PMID:15384171
MGI:3056222
NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
G
Zic5
Zic family member 5
acts_upstream_of_or_within
ISO
MGI:3052154 (MGI:3051968|PMID:15136147)
RGD
PMID:15136147
MGI:3051968
NCBI chr15:99,558,229...99,567,035
Ensembl chr15:99,560,323...99,567,035
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637 (MGI:5532613|PMID:23933587)
RGD
PMID:23933587
MGI:5532613
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
ISO
MGI:1857473|MGI:3773698|MGI:4867385 (MGI:3700083|PMID:17294360), (MGI:5532613|PMID:23933587)
RGD
PMID:17294360 PMID:23933587
MGI:3700083 MGI:5532613
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Sfrp1
secreted frizzled-related protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3045799 (MGI:4437369|PMID:20130188)
Ensembl RGD
PMID:20130188
GO_REF:0000107 MGI:4437369
NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
G
Gsc
goosecoid homeobox
involved_in
ISO
(PMID:24290375)
RGD
PMID:24290375
NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111
G
Acvr1
activin A receptor type 1
acts_upstream_of_or_within
ISO
MGI:2651395 (MGI:3045641|PMID:15226263)
RGD
PMID:15226263
MGI:3045641
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Anxa6
annexin A6
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:39,101,395...39,156,483
Ensembl chr10:39,097,109...39,156,433
G
Cfl1
cofilin 1
acts_upstream_of_or_within
ISO
MGI:3574399 (MGI:3530675|PMID:15649475)
RGD
PMID:15649475
MGI:3530675
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
G
Coro1c
coronin 1C
involved_in
IBA ISO
PMID:21873635 (PMID:25074804)
RGD
PMID:25074804 PMID:21873635
RGD:13792537
NCBI chr12:42,712,960...42,785,179
Ensembl chr12:42,712,991...42,785,179
G
Edn3
endothelin 3
acts_upstream_of_or_within
ISO
MGI:1856392 (MGI:1267304|PMID:9624616)
RGD
PMID:9624616
MGI:1267304
NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
G
Ednrb
endothelin receptor type B
acts_upstream_of_or_within
ISO
(MGI:1349495|PMID:10591209)
RGD
PMID:10591209
MGI:1349495
NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
G
Efnb1
ephrin B1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3039290 (MGI:3037600|PMID:15037550)
Ensembl RGD
PMID:15037550
GO_REF:0000107 MGI:3037600
NCBI chr X:64,257,351...64,270,158
Ensembl chr X:64,257,351...64,270,157
G
Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:1352955|PMID:10655590)
UniProt RGD
PMID:10655590
GO_REF:0000024 MGI:1352955
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
G
Fgf19
fibroblast growth factor 19
acts_upstream_of_or_within
ISO
MGI:3044957 (MGI:3575218|PMID:15789410)
RGD
PMID:15789410
MGI:3575218
NCBI chr 1:200,056,656...200,059,944
Ensembl chr 1:200,056,644...200,060,287
G
Gbx2
gastrulation brain homeobox 2
acts_upstream_of_or_within
ISO
MGI:1857634 (MGI:3588904|PMID:15996652), (MGI:4358009|PMID:19700621), (MGI:5478665|PMID:23144817)
RGD
PMID:15996652 PMID:19700621 PMID:23144817
MGI:3588904 MGI:4358009 MGI:5478665
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
G
Gdnf
glial cell derived neurotrophic factor
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15242795)
UniProt Ensembl RGD
PMID:15242795
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179429 (MGI:3607736|PMID:14659802)
Ensembl RGD
PMID:14659802
GO_REF:0000107 MGI:3607736
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Htr2b
5-hydroxytryptamine receptor 2B
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:707955|PMID:9165122) GO_REF:0000024
Ensembl RGD UniProt
PMID:9165122
GO_REF:0000024 GO_REF:0000107 MGI:707955
NCBI chr 9:86,735,793...86,756,640
Ensembl chr 9:86,742,102...86,755,108
G
Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO
MGI:108075 (MGI:3640718|PMID:16687132)
RGD
PMID:16687132
MGI:3640718
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Kitlg
KIT ligand
acts_upstream_of_or_within
ISO
(MGI:1934508|PMID:11401406)
RGD
PMID:11401406
MGI:1934508
NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214
G
Lama5
laminin subunit alpha 5
acts_upstream_of_or_within
ISO
MGI:1934917 (MGI:3611396|PMID:16316641)
RGD
PMID:16316641
MGI:3611396
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
G
Nrp1
neuropilin 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrtn
neurturin
acts_upstream_of_or_within
ISO
(PMID:15242795)
RGD
PMID:15242795
NCBI chr 9:1,581,860...1,587,835
Ensembl chr 9:1,581,975...1,583,102
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3522498 (MGI:3618450|PMID:16423343)
RGD
PMID:16423343
MGI:3618450
NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359
G
Pax3
paired box 3
acts_upstream_of_or_within
ISO
MGI:3043030 (MGI:3056222|PMID:15384171)
RGD
PMID:15384171
MGI:3056222
NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042
G
Pax6
paired box 6
IMP
RGD
PMID:9079035
RGD:8552342
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Phactr4
phosphatase and actin regulator 4
involved_in
IBA ISO
PMID:21873635 (MGI:5302129|PMID:22215812)
RGD
PMID:22215812 PMID:21873635
MGI:5302129 , RGD:13792537
NCBI chr 5:144,549,350...144,621,259
Ensembl chr 5:144,549,363...144,620,865
G
Radil
Rap associating with DIL domain
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:12,024,395...12,088,540
Ensembl chr12:12,024,395...12,088,540
G
Ret
ret proto-oncogene
acts_upstream_of_or_within
ISO
MGI:2449909 (MGI:3617928|PMID:15242795)
RGD
PMID:15242795
MGI:3617928
NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176
G
Sema3a
semaphorin 3A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3b
semaphorin 3B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:108,271,663...108,280,326
Ensembl chr 8:108,271,666...108,282,919
G
Sema3c
semaphorin 3C
acts_upstream_of_or_within involved_in
ISO IBA
MGI:2150759 (MGI:2149435|PMID:11688556) PMID:21873635
RGD
PMID:11688556 PMID:21873635
MGI:2149435 , RGD:13792537
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
G
Sema3d
semaphorin 3D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:22,316,769...22,505,930
Ensembl chr 4:22,316,779...22,505,930
G
Sema3e
semaphorin 3E
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
G
Sema3f
semaphorin 3F
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
G
Sema3g
semaphorin 3G
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
G
Sema4a
semaphorin 4A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
G
Sema4b
semaphorin 4B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:134,136,646...134,177,777
Ensembl chr 1:134,149,536...134,177,775
G
Sema4c
semaphorin 4C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
G
Sema4d
semaphorin 4D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Sema4f
ssemaphorin 4F
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Sema4g
semaphorin 4G
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:243,849,979...243,865,343
Ensembl chr 1:243,853,854...243,865,341
G
Sema5a
semaphorin 5A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Sema5b
semaphorin 5B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:65,102,031...65,225,456
Ensembl chr11:65,102,031...65,225,311
G
Sema6a
semaphorin 6A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
G
Sema6b
semaphorin 6B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
G
Sema6c
semaphorin 6C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
G
Sema6d
semaphorin 6D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
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Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857796 (MGI:3583396|PMID:15936751)
UniProt RGD
PMID:15936751
GO_REF:0000024 MGI:3583396
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101791 (MGI:3640718|PMID:16687132)
Ensembl RGD
PMID:16687132
GO_REF:0000107 MGI:3640718
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
G
Sox10
SRY-box transcription factor 10
involved_in
IBA ISO
PMID:21873635 (MGI:3527299|PMID:15572147)
RGD
PMID:15572147 PMID:21873635
MGI:3527299 , RGD:13792537
NCBI chr 7:110,725,274...110,735,544
Ensembl chr 7:110,725,274...110,735,544
G
Sox8
SRY-box transcription factor 8
involved_in
ISS ISO
GO_REF:0000024 (MGI:3527299|PMID:15572147)
UniProt RGD
PMID:15572147
GO_REF:0000024 MGI:3527299
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
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Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179190|MGI:2179191 (MGI:3530686|PMID:15652707), (MGI:4822099|PMID:20501333)
UniProt RGD
PMID:15652707 PMID:20501333
GO_REF:0000024 MGI:3530686 MGI:4822099
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
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Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387501 (MGI:2450818|PMID:12522767)
RGD
PMID:12522767
MGI:2450818
NCBI chr 3:29,219,765...29,342,094
Ensembl chr 3:29,218,301...29,345,157
G
Fn1
fibronectin 1
involved_in
ISO IEA
(PMID:26571399) GO_REF:0000107
RGD Ensembl
PMID:26571399
GO_REF:0000107
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662), (MGI:5567908|PMID:19325129)
RGD
PMID:18356247 PMID:19325129 PMID:19386662
MGI:3788968 MGI:3848580 MGI:5567908
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
ISO
(MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662)
RGD
PMID:18356247 PMID:19386662
MGI:3788968 MGI:3848580
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
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Phox2b
paired-like homeobox 2b
involved_in
ISO
(MGI:1337891|PMID:10360575)
RGD
PMID:10360575
MGI:1337891
NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
G
Sema3a
semaphorin 3A
involved_in
ISO
(MGI:3788968|PMID:18356247), (MGI:3848580|PMID:19386662), (MGI:5567908|PMID:19325129)
RGD
PMID:18356247 PMID:19325129 PMID:19386662
MGI:3788968 MGI:3848580 MGI:5567908
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
G
Folr1
folate receptor alpha
involved_in
ISO
(MGI:3721767|PMID:17286298)
RGD
PMID:17286298
MGI:3721767
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
G
Sema3a
semaphorin 3A
involved_in
ISO
(MGI:5567908|PMID:19325129)
RGD
PMID:19325129
MGI:5567908
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Chrd
chordin
involved_in
ISO
MGI:2157350 (MGI:3721005|PMID:17685487)
RGD
PMID:17685487
MGI:3721005
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
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Kbtbd8
kelch repeat and BTB domain containing 8
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:26399832)
UniProt Ensembl RGD
PMID:26399832
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:127,675,967...127,688,785
Ensembl chr 4:127,676,141...127,687,697
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Klhl12
kelch-like family member 12
involved_in
ISO ISS IEA
(PMID:27716508) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:27716508
GO_REF:0000024 GO_REF:0000107
NCBI chr13:45,899,913...45,933,648
Ensembl chr13:45,899,928...45,933,643
G
Lrp6
LDL receptor related protein 6
involved_in
ISO
(PMID:11029007)
RGD
PMID:11029007
NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
G
Nolc1
nucleolar and coiled-body phosphoprotein 1
involved_in
ISO ISS
(PMID:26399832) GO_REF:0000024
RGD UniProt
PMID:26399832
GO_REF:0000024
NCBI chr 1:244,921,275...244,932,089
Ensembl chr 1:244,921,377...244,932,088
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Pdcd6
programmed cell death 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:27716508)
UniProt RGD
PMID:27716508
GO_REF:0000024
NCBI chr 1:28,966,518...28,982,188
Ensembl chr 1:28,966,518...28,982,189
G
Pef1
penta-EF hand domain containing 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:27716508)
UniProt RGD
PMID:27716508
GO_REF:0000024
NCBI chr 5:142,451,791...142,475,061
Ensembl chr 5:142,451,778...142,475,067
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Polr1b
RNA polymerase I subunit B
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 3:116,333,910...116,358,385
Ensembl chr 3:116,333,889...116,358,379
G
Tcof1
treacle ribosome biogenesis factor 1
involved_in
ISO
(PMID:26399832)
RGD
PMID:26399832
NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324
G
Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
involved_in
ISO
(MGI:3054669|PMID:15475956)
RGD
PMID:15475956
MGI:3054669
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
G
Nodal
nodal growth differentiation factor
involved_in
ISO
(MGI:5315339|PMID:17507406)
RGD
PMID:17507406
MGI:5315339
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:2158343|MGI:95522 (MGI:3702797|PMID:16943278)
RGD
PMID:16943278
MGI:3702797
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Dll3
delta like canonical Notch ligand 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857008 (MGI:3620337|PMID:15170697)
Ensembl RGD
PMID:15170697
GO_REF:0000107 MGI:3620337
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
G
Epb41l5
erythrocyte membrane protein band 4.1 like 5
acts_upstream_of_or_within
ISO
MGI:3578147 (MGI:3577662|PMID:15755804)
RGD
PMID:15755804
MGI:3577662
NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:1338938 (MGI:3702797|PMID:16943278)
RGD
PMID:16943278
MGI:3702797
NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
G
Nckap1
NCK-associated protein 1
acts_upstream_of_or_within
ISO
MGI:3578145 (MGI:3701029|PMID:16831833)
RGD
PMID:16831833
MGI:3701029
NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217
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Nup133
nucleoporin 133
acts_upstream_of_or_within
ISO
MGI:3578539 (MGI:3577662|PMID:15755804)
RGD
PMID:15755804
MGI:3577662
NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239
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Poglut1
protein O-glucosyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2137554 (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804)
Ensembl RGD
PMID:9636176 PMID:15755804
GO_REF:0000107 MGI:1267118 MGI:3577662
NCBI chr11:62,198,600...62,226,446
Ensembl chr11:62,198,513...62,226,434
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Tcf15
transcription factor 15
acts_upstream_of_or_within
ISO
MGI:1929775 (MGI:84545|PMID:8955271)
RGD
PMID:8955271
MGI:84545
NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
G
Tead1
TEA domain transcription factor 1
acts_upstream_of_or_within
ISO
MGI:103262|MGI:104904 (MGI:3773640|PMID:18332127)
RGD
PMID:18332127
MGI:3773640
NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
G
Tead2
TEA domain transcription factor 2
acts_upstream_of_or_within
ISO
MGI:101876|MGI:103262 (MGI:3773640|PMID:18332127)
RGD
PMID:18332127
MGI:3773640
NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186
G
Yap1
Yes1 associated transcriptional regulator
acts_upstream_of_or_within
ISO
MGI:101876|MGI:104904 (MGI:3773640|PMID:18332127)
RGD
PMID:18332127
MGI:3773640
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Zic2
Zic family member 2
involved_in
ISO
MGI:106676 (MGI:3714675|PMID:17490632)
RGD
PMID:17490632
MGI:3714675
NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
G
Zic3
Zic family member 3
involved_in
ISO
MGI:106679 (MGI:3714675|PMID:17490632)
RGD
PMID:17490632
MGI:3714675
NCBI chr X:136,123,662...136,134,295
Ensembl chr X:136,124,026...136,134,746
G
Exoc4
exocyst complex component 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4975171 (MGI:1195048|PMID:9441674)
Ensembl RGD
PMID:9441674
GO_REF:0000107 MGI:1195048
NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723
G
Foxc1
forkhead box C1
involved_in acts_upstream_of_or_within
ISO
(MGI:3047050|PMID:15196959) MGI:1347481 (MGI:2150572|PMID:11562355)
RGD
PMID:11562355 PMID:15196959
MGI:2150572 MGI:3047050
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1347466 (MGI:2150572|PMID:11562355)
RGD
PMID:11562355
MGI:2150572
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
G
Hnf1a
HNF1 homeobox A
acts_upstream_of_or_within
ISO
MGI:96770 (MGI:1334099|PMID:10090727)
RGD
PMID:10090727
MGI:1334099
NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
G
Htt
huntingtin
acts_upstream_of_or_within
ISO
MGI:1857180 (MGI:3609520|PMID:16109169)
RGD
PMID:16109169
MGI:3609520
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
G
Lef1
lymphoid enhancer binding factor 1
acts_upstream_of_or_within
ISO
MGI:98504 (MGI:1334099|PMID:10090727)
RGD
PMID:10090727
MGI:1334099
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
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Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO
MGI:98958 (MGI:5634837|PMID:25813538)
RGD
PMID:25813538
MGI:5634837
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
G
Wnt5a
Wnt family member 5A
acts_upstream_of_or_within
ISO
MGI:101948 (MGI:5634837|PMID:25813538)
RGD
PMID:25813538
MGI:5634837
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
G
Nckap1
NCK-associated protein 1
acts_upstream_of_or_within
ISO
MGI:3578145 (MGI:3701029|PMID:16831833)
RGD
PMID:16831833
MGI:3701029
NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217
G
Smad2
SMAD family member 2
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857691 (MGI:3039049|PMID:15084457)
UniProt RGD
PMID:15084457
GO_REF:0000024 MGI:3039049
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
G
Smad3
SMAD family member 3
acts_upstream_of_or_within
ISO
MGI:1857696 (MGI:3039049|PMID:15084457)
RGD
PMID:15084457
MGI:3039049
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:2158343 (MGI:3702797|PMID:16943278)
RGD
PMID:16943278
MGI:3702797
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1857865 (MGI:86990|PMID:9106663)
RGD
PMID:9106663
MGI:86990
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
MGI:1857489 (MGI:86727|PMID:9126297)
RGD
PMID:9126297
MGI:86727
NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
G
Gata5
GATA binding protein 5
involved_in
ISO
(MGI:5286818|PMID:21633169)
RGD
PMID:21633169
MGI:5286818
NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
G
Mir342
microRNA 342
involved_in
ISO
(PMID:26857067)
RGD
PMID:26857067
NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
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Emp2
epithelial membrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6443292|PMID:30773261)
UniProt RGD
PMID:30773261
GO_REF:0000024 MGI:6443292
NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
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Jag1
jagged canonical Notch ligand 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801
RGD:13601997
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Notch1
notch receptor 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801
RGD:13601997
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:5300829|PMID:22186728)
RGD
PMID:22186728
MGI:5300829
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P23359 (MGI:5502250|PMID:23863481)
Ensembl RGD
PMID:23863481
GO_REF:0000107 MGI:5502250
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P21275 (MGI:5502250|PMID:23863481)
RGD
PMID:23863481
MGI:5502250
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Sema3c
semaphorin 3C
involved_in
ISO
(MGI:5693177|PMID:26053665)
RGD
PMID:26053665
MGI:5693177
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(MGI:4838344|PMID:20804746)
RGD
PMID:20804746
MGI:4838344
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Adam8
ADAM metallopeptidase domain 8
involved_in
IEA ISO
GO_REF:0000107 (MGI:7444872|PMID:34615811)
Ensembl RGD
PMID:34615811
GO_REF:0000107 MGI:7444872
NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
G
Ager
advanced glycosylation end product-specific receptor
IMP
RGD
PMID:21743278
RGD:7243870
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
G
Agt
angiotensinogen
involved_in
ISS ISO
GO_REF:0000024 (MGI:7444872|PMID:34615811)
UniProt RGD
PMID:34615811
GO_REF:0000024 MGI:7444872
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Alx1
ALX homeobox 1
involved_in
ISO ISS
(PMID:23288509) GO_REF:0000024
RGD UniProt
PMID:23288509
GO_REF:0000024
NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220
G
Axin2
axin 2
involved_in
ISO IEA
(PMID:17072303) GO_REF:0000107
RGD Ensembl
PMID:17072303
GO_REF:0000107
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
G
Bambi
BMP and activin membrane-bound inhibitor
involved_in
ISO
(PMID:19328798)
RGD
PMID:19328798
NCBI chr17:54,121,251...54,125,816
Ensembl chr17:54,121,255...54,126,060
G
Bcl9l
BCL9 like
involved_in
ISO
(PMID:19328798)
RGD
PMID:19328798
NCBI chr 8:44,811,977...44,840,611
Ensembl chr 8:44,811,977...44,840,611
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3583785 (MGI:3611958|PMID:16314491) (PMID:20890042)
Ensembl RGD
PMID:16314491 PMID:20890042
GO_REF:0000107 MGI:3611958
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P23359 (MGI:5502250|PMID:23863481)
Ensembl RGD
PMID:23863481
GO_REF:0000107 MGI:5502250
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P21275 (MGI:5502250|PMID:23863481)
RGD
PMID:23863481
MGI:5502250
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Col1a1
collagen type I alpha 1 chain
involved_in
ISO
(PMID:20018240)
RGD
PMID:20018240
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
G
Crb2
crumbs cell polarity complex component 2
involved_in
ISO ISS
(MGI:5296388|PMID:22072575), (MGI:5823085|PMID:27870829) GO_REF:0000024
RGD CAFA
PMID:22072575 PMID:27870829
GO_REF:0000024 MGI:5296388 MGI:5823085
NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
UniProtKB:Q9NX18 (PMID:23983127)
RGD
PMID:23983127
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dab2
DAB adaptor protein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:15734730) (MGI:5442513|PMID:15734730)
Ensembl RGD
PMID:15734730
GO_REF:0000107 MGI:5442513
NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
involved_in
ISO
(PMID:20154697)
RGD
PMID:20154697
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
G
Fermt2
FERM domain containing kindlin 2
involved_in
ISO
(PMID:24226523)
RGD
PMID:24226523
NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
G
Foxc1
forkhead box C1
involved_in
ISO
(PMID:22991501)
RGD
PMID:22991501
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Gcnt2
glucosaminyl (N-acetyl) transferase 2
involved_in
ISO
(PMID:21750175) (MGI:5545971|PMID:21750175)
RGD
PMID:21750175
MGI:5545971
NCBI chr17:23,796,859...23,901,625 NCBI chr17:23,866,602...23,868,691
Ensembl chr17:23,796,859...23,901,611
G
Glipr2
GLI pathogenesis-related 2
involved_in
ISO
(PMID:23516513)
RGD
PMID:23516513
NCBI chr 5:58,170,417...58,200,947
Ensembl chr 5:58,170,425...58,202,272
G
Hdac2
histone deacetylase 2
IMP
RGD
PMID:19553350
RGD:9590229
NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
G
Il1b
interleukin 1 beta
involved_in
ISO
(PMID:25204733)
RGD
PMID:25204733
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Il6
interleukin 6
involved_in
ISO
(PMID:25916550)
RGD
PMID:25916550
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Isl1
ISL LIM homeobox 1
involved_in
IMP
PMID:23270756
BHF-UCL RGD
PMID:23270756 PMID:23270756
RGD:13210526 , RGD:13210526
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Lef1
lymphoid enhancer binding factor 1
involved_in
ISO
(PMID:20018240)
RGD
PMID:20018240
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Loxl2
lysyl oxidase-like 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:24239292)
UniProt Ensembl RGD
PMID:24239292
GO_REF:0000024 GO_REF:0000107
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
G
Lrg1
leucine-rich alpha-2-glycoprotein 1
involved_in
ISO
(PMID:32887674)
RGD
PMID:32887674
NCBI chr 9:947,516...949,773
Ensembl chr 9:947,516...949,813
G
Mad2l2
mitotic arrest deficient 2 like 2
IMP
TGFb1
RGD
PMID:27488450
RGD:152995505
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
G
Mdk
midkine
involved_in
ISO ISS
(PMID:18469519) GO_REF:0000024
RGD UniProt
PMID:18469519
GO_REF:0000024
NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mir21
microRNA 21
involved_in
ISO
(PMID:24887517)
RGD
PMID:24887517
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir221
microRNA 221
involved_in
ISO
RNAcentral:URS00002C6949_9606 (PMID:21673316)
RGD
PMID:21673316
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir222
microRNA 222
involved_in
ISO
RNAcentral:URS0000170CF4_9606 (PMID:21673316)
RGD
PMID:21673316
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Mtor
mechanistic target of rapamycin kinase
involved_in
ISO
(PMID:27919618)
RGD
PMID:27919618
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Myocd
myocardin
involved_in
IMP
PMID:23270756
BHF-UCL
PMID:23270756
RGD:13210526
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Notch1
notch receptor 1
involved_in
ISO
(MGI:4837019|PMID:20890042)
RGD
PMID:20890042
MGI:4837019
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
G
Pdpn
podoplanin
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:17046996), (PMID:21376833)
UniProt RGD
PMID:17046996 PMID:21376833 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
G
Ptk2
protein tyrosine kinase 2
involved_in
ISO
RNAcentral:URS000060A1F4_9606 (PMID:26944318)
RGD
PMID:26944318
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Rgcc
regulator of cell cycle
involved_in
ISO
(PMID:19158077), (PMID:21307346)
RGD
PMID:19158077 PMID:21307346
NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
G
Sdcbp
syndecan binding protein
involved_in
ISO ISS
(PMID:25893292) GO_REF:0000024
RGD UniProt
PMID:25893292
GO_REF:0000024
NCBI chr 5:19,473,499...19,517,188
Ensembl chr 5:19,489,961...19,527,572
G
Serpinb3
serpin family B member 3
involved_in
ISO
(PMID:20527027)
RGD
PMID:20527027
NCBI chr13:23,274,120...23,280,082
Ensembl chr13:23,274,484...23,313,682
G
Smad2
SMAD family member 2
involved_in
ISO
(MGI:2683382|PMID:14691138)
RGD
PMID:14691138
MGI:2683382
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
G
Smad3
SMAD family member 3
involved_in
ISO
(PMID:18505915), (PMID:21307346)
RGD
PMID:18505915 PMID:21307346
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:2683382|PMID:14691138)
Ensembl RGD
PMID:14691138
GO_REF:0000107 MGI:2683382
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Snai1
snail family transcriptional repressor 1
involved_in
ISO
(PMID:20018240), (PMID:23288509) (MGI:4837019|PMID:20890042), (MGI:5548026|PMID:24239292)
RGD
PMID:20018240 PMID:20890042 PMID:23288509 PMID:24239292
MGI:4837019 MGI:5548026
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
G
Tbx20
T-box transcription factor 20
involved_in
ISO
(MGI:5299248|PMID:21983003)
RGD
PMID:21983003
MGI:5299248
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
G
Tgfb1
transforming growth factor, beta 1
involved_in acts_upstream_of_or_within
ISO ISS
(PMID:17999987), (PMID:18505915) (MGI:3821807|PMID:18794329) GO_REF:0000024
RGD UniProt
PMID:17999987 PMID:18505915 PMID:18794329
GO_REF:0000024 MGI:3821807
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb1i1
transforming growth factor beta 1 induced transcript 1
involved_in
ISO
(PMID:18762808)
RGD
PMID:18762808
NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:17999987), (PMID:18505915)
AgBase RGD
PMID:17999987 PMID:18505915
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfb3
transforming growth factor, beta 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:2683382|PMID:14691138) (PMID:18505915), (PMID:18718461)
AgBase RGD
PMID:14691138 PMID:18505915 PMID:18718461
GO_REF:0000024 MGI:2683382
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO
UniProtKB:P10600 (MGI:3820811|PMID:18718461)
RGD
PMID:18718461
MGI:3820811
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(PMID:26459119)
RGD
PMID:26459119
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:18297062) (MGI:4838344|PMID:20804746), (MGI:5284765|PMID:18297062), (MGI:5284780|PMID:17332324)
RGD
PMID:17332324 PMID:18297062 PMID:20804746
MGI:4838344 MGI:5284765 MGI:5284780
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Wwtr1
WW domain containing transcription regulator 1
involved_in
ISO
(PMID:18227151)
RGD
PMID:18227151
NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
G
Zfp703
zinc finger protein 703
involved_in
ISO
(MGI:4940410|PMID:21317240)
RGD
PMID:21317240
MGI:4940410
NCBI chr16:65,076,507...65,080,677
Ensembl chr16:65,076,507...65,080,677
G
Acvr1
activin A receptor type 1
involved_in
ISO
(MGI:3610266|PMID:16140292)
RGD
PMID:16140292
MGI:3610266
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Eng
endoglin
involved_in
ISO
(MGI:4368063|PMID:19703439)
RGD
PMID:19703439
MGI:4368063
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO
(MGI:3820811|PMID:18718461)
RGD
PMID:18718461
MGI:3820811
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(MGI:3801267|PMID:17050629)
RGD
PMID:17050629
MGI:3801267
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Myc
MYC proto-oncogene, bHLH transcription factor
involved_in
ISS ISO
GO_REF:0000024 (MGI:3830398|PMID:19161241)
UniProt RGD
PMID:19161241
GO_REF:0000024 MGI:3830398
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
G
Smad2
SMAD family member 2
involved_in
ISO
(PMID:17239842)
RGD
PMID:17239842
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
G
Zic2
Zic family member 2
acts_upstream_of_or_within
ISO
MGI:1862004 (MGI:5584215|PMID:24585447)
RGD
PMID:24585447
MGI:5584215
NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO
GO_REF:0000107 (PMID:10654605)
Ensembl RGD
PMID:10654605
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Nkx2-5
NK2 homeobox 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2654594 (MGI:3815254|PMID:18722343)
Ensembl RGD
PMID:18722343
GO_REF:0000107 MGI:3815254
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
G
Tgfbr1
transforming growth factor, beta receptor 1
NOT|involved_in
ISO
(MGI:3820811|PMID:18718461)
RGD
PMID:18718461
MGI:3820811
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Zfp36l1
zinc finger protein 36, C3H type-like 1
acts_upstream_of_or_within
ISO
MGI:3050540 (MGI:3047495|PMID:15226444)
RGD
PMID:15226444
MGI:3047495
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
G
Eng
endoglin
NOT|involved_in
ISO
(MGI:3721185|PMID:17628518)
RGD
PMID:17628518
MGI:3721185
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Aplf
aprataxin and PNKP like factor
involved_in
ISO
(MGI:6780835|PMID:33277378)
RGD
PMID:33277378
MGI:6780835
NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633
G
Clasp1
cytoplasmic linker associated protein 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
G
Clasp2
cytoplasmic linker associated protein 2
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
G
Dag1
dystroglycan 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Ell3
elongation factor for RNA polymerase II 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5438719|PMID:22768269)
UniProt RGD
PMID:22768269
GO_REF:0000024 MGI:5438719
NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132
G
Epha3
Eph receptor A3
involved_in
ISS ISO
GO_REF:0000024 (MGI:3703403|PMID:17046737)
UniProt RGD
PMID:17046737
GO_REF:0000024 MGI:3703403
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:16816361)
RGD
PMID:16816361
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
G
Mcrip1
MAPK regulated co-repressor interacting protein 1
involved_in
ISO ISS
(PMID:25728771) GO_REF:0000024
RGD UniProt
PMID:25728771
GO_REF:0000024
NCBI chr10:105,820,656...105,828,146
Ensembl chr10:105,820,656...105,828,271
G
Phldb1
pleckstrin homology-like domain, family B, member 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:45,003,538...45,051,541
Ensembl chr 8:45,003,538...45,051,522
G
Phldb2
pleckstrin homology-like domain, family B, member 2
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
G
Pofut2
protein O-fucosyltransferase 2
acts_upstream_of_or_within
ISO
MGI:3604508|MGI:4127173 (MGI:4838381|PMID:20637190)
RGD
PMID:20637190
MGI:4838381
NCBI chr20:11,367,073...11,377,788
Ensembl chr20:11,367,096...11,377,743
G
Smad7
SMAD family member 7
involved_in
ISO IEA
(PMID:24887517) GO_REF:0000107
RGD Ensembl
PMID:24887517
GO_REF:0000107
NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tiam1
TIAM Rac1 associated GEF 1
involved_in
ISO
(PMID:20826792)
RGD
PMID:20826792
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
G
Tgfb1
transforming growth factor, beta 1
NOT|involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb3
transforming growth factor, beta 3
NOT|involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:95522 (MGI:3702797|PMID:16943278)
RGD
PMID:16943278
MGI:3702797
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:1338938 (MGI:3702797|PMID:16943278)
RGD
PMID:16943278
MGI:3702797
NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(MGI:3040576|PMID:15073157)
RGD
PMID:15073157
MGI:3040576
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(MGI:3040576|PMID:15073157)
RGD
PMID:15073157
MGI:3040576
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Meox1
mesenchyme homeobox 1
involved_in
ISO
(MGI:3038036|PMID:15024065), (MGI:4360150|PMID:19520072)
RGD
PMID:15024065 PMID:19520072
MGI:3038036 MGI:4360150
NCBI chr10:86,818,450...86,837,563
Ensembl chr10:86,818,478...86,837,660
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Pax1
paired box 1
involved_in
ISO
(MGI:72077|PMID:7743923)
RGD
PMID:7743923
MGI:72077
NCBI chr 3:134,789,291...134,801,636
Ensembl chr 3:134,789,182...134,801,636
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Scx
scleraxis bHLH transcription factor
involved_in
ISO
(MGI:72077|PMID:7743923)
RGD
PMID:7743923
MGI:72077
NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
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Sfrp2
secreted frizzled-related protein 2
involved_in
ISO
(MGI:1349347|PMID:10654605)
RGD
PMID:10654605
MGI:1349347
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
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Tgfbr2
transforming growth factor, beta receptor 2
NOT|involved_in
ISO
(MGI:3801267|PMID:17050629)
RGD
PMID:17050629
MGI:3801267
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
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Lama5
laminin subunit alpha 5
acts_upstream_of_or_within
ISO
MGI:1934917 (MGI:3611396|PMID:16316641)
RGD
PMID:16316641
MGI:3611396
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
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Nrp2
neuropilin 2
acts_upstream_of_or_within
ISO
MGI:2137037 (MGI:3613099|PMID:16319111)
RGD
PMID:16319111
MGI:3613099
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
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Sema3f
semaphorin 3F
acts_upstream_of_or_within
ISO
MGI:2670663 (MGI:3613099|PMID:16319111)
RGD
PMID:16319111
MGI:3613099
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
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Shh
sonic hedgehog signaling molecule
acts_upstream_of involved_in
ISO IEA
(MGI:3053236|PMID:15337776) GO_REF:0000107
RGD Ensembl
PMID:15337776
GO_REF:0000107 MGI:3053236
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Nrp1
neuropilin 1
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Nrp2
neuropilin 2
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
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Sema3a
semaphorin 3A
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema3f
semaphorin 3F
involved_in
ISO
(MGI:3848580|PMID:19386662)
RGD
PMID:19386662
MGI:3848580
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
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