Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:lung cell differentiation
go back to main search page
Accession:GO:0060479 term browser browse the term
Definition:The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate.
Synonyms:exact_synonym: pulmonary cell differentiation



show annotations for term's descendants           Sort by:
lung cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19805295) Ensembl
MGI
PMID:19805295 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311
JBrowse link
club cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17164424) Ensembl
MGI
PMID:17164424 GO_REF:0000107 NCBI chr 6:107,282,709...107,314,725
Ensembl chr 6:107,282,849...107,314,626
JBrowse link
G NFIB nuclear factor I B involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17164424) Ensembl
MGI
PMID:17164424 GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22797898) Ensembl
MGI
PMID:22797898 GO_REF:0000107 NCBI chr 8:19,933,035...20,166,746
Ensembl chr 8:19,922,779...20,166,754
JBrowse link
lung ciliated cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFIB nuclear factor I B involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602
JBrowse link
lung epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:16040629) Ensembl
MGI
PMID:16040629 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311
JBrowse link
G DHCR7 7-dehydrocholesterol reductase acts_upstream_of_or_within ISO (PMID:15005800) MGI PMID:15005800 NCBI chr 2:2,377,352...2,391,846
Ensembl chr 2:2,377,416...2,391,447
JBrowse link
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15668254) Ensembl
MGI
PMID:15668254 GO_REF:0000107 NCBI chr 7:62,471,233...62,479,638
Ensembl chr 7:62,471,249...62,479,220
JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:15668254) MGI PMID:15668254 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919
JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:31837950) MGI PMID:31837950 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16998587) Ensembl
MGI
PMID:16998587 GO_REF:0000107 NCBI chr 3:74,004,620...74,068,173
Ensembl chr 3:74,000,517...74,068,172
JBrowse link
G PTHLH parathyroid hormone like hormone acts_upstream_of_or_within ISO (PMID:15162506) MGI PMID:15162506 NCBI chr 5:45,750,968...45,763,421
Ensembl chr 5:45,751,292...45,763,415
JBrowse link
G SAV1 salvador family WW domain containing protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18369314) Ensembl
MGI
PMID:18369314 GO_REF:0000107 NCBI chr 1:180,404,871...180,434,458
Ensembl chr 1:180,406,162...180,434,196
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24191021) Ensembl
MGI
PMID:24191021 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G TMEM38B transmembrane protein 38B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19515693) Ensembl
MGI
PMID:19515693 GO_REF:0000107 NCBI chr 1:246,973,447...247,024,019
Ensembl chr 1:246,973,436...247,027,527
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25043473) Ensembl
MGI
PMID:25043473 GO_REF:0000107 NCBI chr 9:32,811,629...32,924,926
Ensembl chr 9:32,811,226...32,925,606
JBrowse link
lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGR2 anterior gradient 2, protein disulphide isomerase family member involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22675208) Ensembl
MGI
PMID:22675208 GO_REF:0000107 NCBI chr 9:86,042,070...86,053,893
Ensembl chr 9:86,041,369...86,053,857
JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17003488) Ensembl
MGI
PMID:17003488 GO_REF:0000107 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885
JBrowse link
G SPDEF SAM pointed domain containing ETS transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17347682) Ensembl
MGI
PMID:17347682 GO_REF:0000107 NCBI chr 7:30,515,925...30,538,095
Ensembl chr 7:30,515,925...30,524,470
JBrowse link
lung neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9126746) Ensembl
MGI
PMID:9126746 GO_REF:0000107 NCBI chr 5:81,357,431...81,360,335
Ensembl chr 5:81,358,969...81,359,673
JBrowse link
lung secretory cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chr13:52,346,844...52,974,358
Ensembl chr13:52,348,234...52,876,892
JBrowse link
G FOXP4 forkhead box P4 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chr 7:36,760,643...36,793,620
Ensembl chr 7:36,742,752...36,793,619
JBrowse link
negative regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chr13:52,346,844...52,974,358
Ensembl chr13:52,348,234...52,876,892
JBrowse link
G FOXP4 forkhead box P4 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chr 7:36,760,643...36,793,620
Ensembl chr 7:36,742,752...36,793,619
JBrowse link
positive regulation of lung ciliated cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,307,370...5,312,117
Ensembl chr12:5,307,374...5,312,106
JBrowse link
G TP73 tumor protein p73 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:65,169,770...65,228,997
Ensembl chr 6:65,182,456...65,228,990
JBrowse link
regulation of lung goblet cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXP1 forkhead box P1 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chr13:52,346,844...52,974,358
Ensembl chr13:52,348,234...52,876,892
JBrowse link
G FOXP4 forkhead box P4 acts_upstream_of_or_within ISO (PMID:22675208) MGI PMID:22675208 NCBI chr 7:36,760,643...36,793,620
Ensembl chr 7:36,742,752...36,793,619
JBrowse link
type I pneumocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREB1 cAMP responsive element binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21408140) Ensembl
MGI
PMID:21408140 GO_REF:0000107 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,705,496...110,771,728
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
JBrowse link
G KLF2 KLF transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22001906) Ensembl
MGI
PMID:22001906 GO_REF:0000107 NCBI chr 2:61,270,733...61,273,037
Ensembl chr 2:61,270,199...61,273,138
JBrowse link
G KRAS KRAS proto-oncogene, GTPase involved_in
acts_upstream_of
IEA
ISO
(PMID:24058167) Ensembl
MGI
PMID:24058167 GO_REF:0000107 NCBI chr 5:48,508,774...48,546,260
Ensembl chr 5:48,508,811...48,549,358
JBrowse link
G LTA4H leukotriene A4 hydrolase ISO RGD PMID:15805137 RGD:2316585 NCBI chr 5:87,486,552...87,518,520
Ensembl chr 5:87,486,512...87,518,515
JBrowse link
G NCOR2 nuclear receptor corepressor 2 acts_upstream_of_or_within ISO (PMID:22001906) MGI PMID:22001906 NCBI chr14:28,642,774...28,819,404
Ensembl chr14:28,624,702...28,819,404
JBrowse link
G NFIB nuclear factor I B involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of
IEA
ISO
(PMID:24058167) Ensembl
MGI
PMID:24058167 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G THRA thyroid hormone receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22001906) Ensembl
MGI
PMID:22001906 GO_REF:0000107 NCBI chr12:22,270,506...22,296,684
Ensembl chr12:22,270,062...22,296,618
JBrowse link
G THRB thyroid hormone receptor beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22001906) Ensembl
MGI
PMID:22001906 GO_REF:0000107 NCBI chr13:10,900,716...11,360,587
Ensembl chr13:10,900,724...11,359,544
JBrowse link
type II pneumocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIMP2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12819782) Ensembl
MGI
PMID:12819782 GO_REF:0000107 NCBI chr 3:5,109,617...5,117,919
Ensembl chr 3:5,109,618...5,117,958
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15531758) Ensembl
MGI
PMID:15531758 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509
JBrowse link
G FNDC3B fibronectin type III domain containing 3B acts_upstream_of_or_within ISO (PMID:21704616) MGI PMID:21704616 NCBI chr13:110,587,464...110,931,687
Ensembl chr13:110,587,463...110,928,465
JBrowse link
G GATA6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17164424) Ensembl
MGI
PMID:17164424 GO_REF:0000107 NCBI chr 6:107,282,709...107,314,725
Ensembl chr 6:107,282,849...107,314,626
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:16691571) MGI PMID:16691571 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033
JBrowse link
G NFIB nuclear factor I B involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17164424) Ensembl
MGI
PMID:17164424 GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575
JBrowse link
G RBBP9 RB binding protein 9, serine hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:32484881) Ensembl
MGI
PMID:32484881 GO_REF:0000107 NCBI chr17:26,740,559...26,749,698
Ensembl chr17:26,736,526...26,760,242
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18932
    cellular process 18474
      cellular developmental process 4566
        cell differentiation 4565
          lung cell differentiation 36
            lung basal cell differentiation 0
            lung epithelial cell differentiation + 36
Path 2
Term Annotations click to browse term
  biological_process 18932
    developmental process 6758
      anatomical structure development 6342
        multicellular organism development 5123
          system development 4469
            respiratory system development 310
              lung development 274
                lung cell differentiation 36
                  lung basal cell differentiation 0
                  lung epithelial cell differentiation + 36
paths to the root