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ONTOLOGY REPORT - ANNOTATIONS

Term:trachea formation
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Accession:GO:0060440 term browser browse the term
Definition:The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches.


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trachea formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3797048 (MGI:3820452|PMID:18692041)		 Ensembl
RGD		 PMID:18692041 GO_REF:0000107 MGI:3820452 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2148569 (MGI:4361775|PMID:19805295)
GO_REF:0000107		 RGD
Ensembl		 PMID:19805295 GO_REF:0000107 MGI:4361775 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1346867 (MGI:5588044|PMID:25100655)		 Ensembl
RGD		 PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1346866 (MGI:5588044|PMID:25100655)
GO_REF:0000107		 RGD
Ensembl		 PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1346859 (MGI:5588044|PMID:25100655)
GO_REF:0000107		 RGD
Ensembl		 PMID:25100655 GO_REF:0000107 MGI:5588044 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (MGI:5588044|PMID:25100655) RGD PMID:25100655 MGI:5588044 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2384513 (MGI:3829327|PMID:18990706)
GO_REF:0000107		 RGD
Ensembl		 PMID:18990706 GO_REF:0000107 MGI:3829327 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    developmental process 6909
      anatomical structure formation involved in morphogenesis 1353
        animal organ formation 77
          trachea formation 7
Path 2
Term Annotations click to browse term
  biological_process 19553
    developmental process 6909
      anatomical structure development 6435
        multicellular organism development 5184
          system development 4463
            respiratory system development 317
              trachea development 22
                trachea morphogenesis 12
                  trachea formation 7
paths to the root