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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelium development
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Accession:GO:0060429 term browser browse the term
Definition:The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.



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epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:83672|PMID:8898217) MGI
Ensembl
PMID:8898217 GO_REF:0000107 MGI:83672 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3843558|PMID:19279158) MGI
Ensembl
Ensembl
PMID:19279158 GO_REF:0000107 MGI:3843558 NCBI chr 8:60,678,740...60,868,028
Ensembl chr 8:60,678,740...60,868,028
JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5766597|PMID:26024086), (MGI:6160687|PMID:29700203) MGI
Ensembl
PMID:26024086 PMID:29700203 GO_REF:0000107 MGI:5766597 MGI:6160687 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826
JBrowse link
G FOXJ1 forkhead box J1 involved_in ISS
IEA
(PMID:9073514) BHF-UCL
Ensembl
BHF-UCL
PMID:9073514 GO_REF:0000107 NCBI chr17:76,136,333...76,141,245
Ensembl chr17:76,136,333...76,141,245
JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807614|PMID:18635606) MGI
Ensembl
PMID:18635606 GO_REF:0000107 MGI:3807614 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G HPN hepsin involved_in ISO (MGI:5306336|PMID:8346233) UniProt PMID:8346233 MGI:5306336 NCBI chr19:35,040,506...35,066,573
Ensembl chr19:35,040,506...35,066,573
JBrowse link
G KRT12 keratin 12 acts_upstream_of_or_within ISO (MGI:85415|PMID:8977471) MGI PMID:8977471 MGI:85415 NCBI chr17:40,861,303...40,867,223
Ensembl chr17:40,861,303...40,867,223
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G NFIX nuclear factor I X involved_in ISO (MGI:3801392|PMID:18477394) MGI PMID:18477394 MGI:3801392 NCBI chr19:12,995,475...13,098,796
Ensembl chr19:12,995,475...13,098,796
JBrowse link
G RARG retinoic acid receptor gamma acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:60925|PMID:8388780) MGI
Ensembl
PMID:8388780 GO_REF:0000107 MGI:60925 NCBI chr12:53,210,569...53,232,209
Ensembl chr12:53,210,567...53,232,980
JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in ISS
IEA
(PMID:18716062) BHF-UCL
Ensembl
BHF-UCL
PMID:18716062 GO_REF:0000107 NCBI chr 8:48,917,598...48,921,429
Ensembl chr 8:48,917,598...48,921,740
JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:40,844,048...40,858,207
Ensembl chr15:40,844,018...40,858,207
JBrowse link
G WNT7B Wnt family member 7B involved_in IEA UniProt GO_REF:0000117 NCBI chr22:45,920,366...45,977,162
Ensembl chr22:45,920,366...45,977,162
JBrowse link
acinar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCN2 chloride voltage-gated channel 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2182239|PMID:11976342) Ensembl
MGI
PMID:11976342 GO_REF:0000107 MGI:2182239 NCBI chr 3:184,346,185...184,361,605
Ensembl chr 3:184,346,185...184,361,650
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3607950|PMID:16192304) Ensembl
MGI
PMID:16192304 GO_REF:0000107 MGI:3607950 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5588050|PMID:25063451) Ensembl
MGI
PMID:25063451 GO_REF:0000107 MGI:5588050 NCBI chr 1:200,027,710...200,177,415
Ensembl chr 1:200,027,614...200,177,420
JBrowse link
G PROX1 prospero homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5317511|PMID:22178591) MGI
Ensembl
Ensembl
PMID:22178591 GO_REF:0000107 MGI:5317511 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G ZNF800 zinc finger protein 800 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6716121|PMID:33653874) MGI
Ensembl
PMID:33653874 GO_REF:0000107 MGI:6716121 NCBI chr 7:127,342,859...127,392,708
Ensembl chr 7:127,346,790...127,431,924
JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714080|PMID:17317769) MGI
Ensembl
Ensembl
PMID:17317769 GO_REF:0000107 MGI:3714080 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619
JBrowse link
adrenal chromaffin cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2387977|PMID:12361965) MGI
Ensembl
Ensembl
PMID:12361965 GO_REF:0000107 MGI:2387977 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513
JBrowse link
G INSM1 INSM transcriptional repressor 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:20,368,104...20,370,949
Ensembl chr20:20,368,104...20,370,949
JBrowse link
alveolar primary septum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IMP (PMID:17273977) DFLAT
DFLAT
PMID:17273977 NCBI chr15:74,179,466...74,212,259
Ensembl chr15:74,179,466...74,212,267
JBrowse link
alveolar secondary septum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:1309575|PMID:9716527) MGI PMID:9716527 MGI:1309575 NCBI chr 4:1,793,293...1,808,867
Ensembl chr 4:1,793,293...1,808,872
JBrowse link
G FGFR4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (MGI:1309575|PMID:9716527) MGI PMID:9716527 MGI:1309575 NCBI chr 5:177,086,915...177,098,144
Ensembl chr 5:177,086,905...177,098,144
JBrowse link
G FOXA1 forkhead box A1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3613241|PMID:16214823) MGI
Ensembl
Ensembl
PMID:16214823 GO_REF:0000107 MGI:3613241 NCBI chr14:37,589,552...37,595,249
Ensembl chr14:37,589,552...37,596,059
JBrowse link
ameloblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL5 achaete-scute family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:201,113,943...201,127,184
Ensembl chr 1:201,113,943...201,127,184
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of
IEA
ISO
(MGI:3513220|PMID:15525533) Ensembl
MGI
PMID:15525533 GO_REF:0000107 MGI:3513220 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of
IEA
ISO
(MGI:3513220|PMID:15525533) Ensembl
MGI
PMID:15525533 GO_REF:0000107 MGI:3513220 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of
IEA
ISO
(MGI:3513220|PMID:15525533) Ensembl
MGI
PMID:15525533 GO_REF:0000107 MGI:3513220 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:5912858|PMID:25027178) MGI PMID:25027178 MGI:5912858 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873
JBrowse link
G ENAM enamelin involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5647983|PMID:24603688)
GO_Central
GO_Central
MGI
PMID:21873635 PMID:24603688 MGI:5647983 NCBI chr 4:70,628,744...70,646,824
Ensembl chr 4:70,628,744...70,646,824
JBrowse link
G FST follistatin involved_in
acts_upstream_of
IEA
ISO
(MGI:3513220|PMID:15525533) Ensembl
MGI
PMID:15525533 GO_REF:0000107 MGI:3513220 NCBI chr 5:53,480,629...53,487,134
Ensembl chr 5:53,480,626...53,487,134
JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:3848106|PMID:19233155), (MGI:4848250|PMID:20816801) MGI PMID:19233155 PMID:20816801 MGI:3848106 MGI:4848250 NCBI chr22:19,756,703...19,783,593
Ensembl chr22:19,756,703...19,783,593
JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP3 caspase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5050793|PMID:21515572) MGI
Ensembl
Ensembl
PMID:21515572 GO_REF:0000107 MGI:5050793 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,650,062
JBrowse link
G FOLR1 folate receptor alpha involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5050793|PMID:21515572) Ensembl
Ensembl
MGI
PMID:21515572 GO_REF:0000107 MGI:5050793 NCBI chr 8:101,492,439...101,681,200
Ensembl chr 8:101,492,439...101,669,726
JBrowse link
G SPECC1L sperm antigen with calponin homology and coiled-coil domains 1 like acts_upstream_of_or_within ISO (MGI:6101898|PMID:26787558) MGI PMID:26787558 MGI:6101898 NCBI chr22:24,270,831...24,417,738
Ensembl chr22:24,270,817...24,417,739
JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATAD2A GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (MGI:3762244|PMID:17565372) MGI PMID:17565372 MGI:3762244 NCBI chr19:19,385,843...19,508,932
Ensembl chr19:19,385,826...19,508,932
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:80520|PMID:8622765) MGI PMID:8622765 MGI:80520 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC88C coiled-coil domain containing 88C involved_in IDA (PMID:30948426) UniProt
UniProt
PMID:30948426 NCBI chr14:91,271,323...91,417,820
Ensembl chr14:91,271,323...91,417,844
JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4438998|PMID:20103536) MGI
Ensembl
Ensembl
PMID:20103536 GO_REF:0000107 MGI:4438998 NCBI chr 2:120,013,077...120,179,119
Ensembl chr 2:120,013,077...120,179,119
JBrowse link
G FRMD6 FERM domain containing 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5086051|PMID:21685893) Ensembl
MGI
Ensembl
PMID:21685893 GO_REF:0000107 MGI:5086051 NCBI chr14:51,396,431...51,730,727
Ensembl chr14:51,489,100...51,730,727
JBrowse link
G PARD3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chr10:34,109,561...34,815,296
Ensembl chr10:34,109,560...34,815,325
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5086051|PMID:21685893) MGI
Ensembl
Ensembl
PMID:21685893 GO_REF:0000107 MGI:5086051 NCBI chr18:20,946,906...21,111,813
Ensembl chr18:20,946,906...21,111,813
JBrowse link
arterial endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,762,371...79,767,857
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
G NOTCH1 notch receptor 1 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G TMEM100 transmembrane protein 100 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432418|PMID:22783020) MGI
Ensembl
Ensembl
PMID:22783020 GO_REF:0000107 MGI:5432418 NCBI chr17:55,719,627...55,732,081
Ensembl chr17:55,719,627...55,732,121
JBrowse link
arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG10B ALG10 alpha-1,2-glucosyltransferase B acts_upstream_of_or_within ISO (MGI:5568671|PMID:24303013) MGI PMID:24303013 MGI:5568671 NCBI chr12:38,316,687...38,329,721
Ensembl chr12:38,316,762...38,329,721
JBrowse link
G CLRN1 clarin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3849925|PMID:19414487) MGI
Ensembl
PMID:19414487 GO_REF:0000107 MGI:3849925 NCBI chr 3:150,926,163...150,972,999
Ensembl chr 3:150,926,163...150,972,727
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3527944|PMID:15630379) MGI PMID:15630379 MGI:3527944 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:2,445,008...2,849,110
Ensembl chr11:2,444,684...2,849,105
JBrowse link
G LRTOMT leucine rich transmembrane and O-methyltransferase domain containing involved_in ISS (PMID:18794526) UniProt
UniProt
PMID:18794526 NCBI chr11:72,080,850...72,110,782
Ensembl chr11:72,080,331...72,110,782
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:2,593,183...2,685,615
Ensembl chr17:2,593,210...2,685,615
JBrowse link
G PDZD7 PDZ domain containing 7 acts_upstream_of_or_within
involved_in
ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,007,679...101,031,129
Ensembl chr10:101,007,679...101,032,295
JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:2680888|PMID:12808454)
(PMID:21873635)
MGI
GO_Central
GO_Central
PMID:12808454 PMID:21873635 MGI:2680888 NCBI chr 3:27,372,723...27,484,384
Ensembl chr 3:27,372,721...27,484,420
JBrowse link
G TMC1 transmembrane channel like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5320864|PMID:22105175) Ensembl
Ensembl
MGI
PMID:22105175 GO_REF:0000107 MGI:5320864 NCBI chr 9:72,521,608...72,838,297
Ensembl chr 9:72,521,608...72,838,297
JBrowse link
G TOMT transmembrane O-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:72,105,924...72,109,596
Ensembl chr11:72,105,924...72,109,596
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 involved_in ISS
IEA
(PMID:10080181) UniProt
Ensembl
UniProt
PMID:10080181 GO_REF:0000107 NCBI chr14:105,140,995...105,168,776
Ensembl chr14:105,140,982...105,168,824
JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833041|PMID:19154718) MGI
Ensembl
Ensembl
PMID:19154718 GO_REF:0000107 MGI:3833041 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3833041|PMID:19154718) Ensembl
MGI
Ensembl
PMID:19154718 GO_REF:0000107 MGI:3833041 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH1 atonal bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611666|PMID:16407553) MGI
Ensembl
Ensembl
PMID:16407553 GO_REF:0000107 MGI:3611666 NCBI chr 4:93,828,753...93,830,964
Ensembl chr 4:93,828,753...93,830,964
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH1 atonal bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1339217|PMID:10364557) MGI
Ensembl
Ensembl
PMID:10364557 GO_REF:0000107 MGI:1339217 NCBI chr 4:93,828,753...93,830,964
Ensembl chr 4:93,828,753...93,830,964
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR96 microRNA 96 acts_upstream_of_or_within ISO (MGI:4353582|PMID:19363478) MGI PMID:19363478 MGI:4353582 NCBI chr 7:129,774,692...129,774,769
Ensembl chr 7:129,774,692...129,774,769
JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:4430014|PMID:20016102) MGI PMID:20016102 MGI:4430014 NCBI chr 7:6,374,527...6,403,967
Ensembl chr 7:6,374,527...6,403,967
JBrowse link
G SCRIB scribble planar cell polarity protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439427|PMID:20215345) MGI
Ensembl
PMID:20215345 GO_REF:0000107 MGI:4439427 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773
JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439427|PMID:20215345) MGI
Ensembl
PMID:20215345 GO_REF:0000107 MGI:4439427 NCBI chr 4:109,433,815...109,540,896
Ensembl chr 4:109,433,772...109,540,896
JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4413621|PMID:19936227) Ensembl
Ensembl
MGI
PMID:19936227 GO_REF:0000107 MGI:4413621 NCBI chr13:85,792,790...85,799,419
Ensembl chr13:85,792,790...85,806,683
JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5544506|PMID:24302887) Ensembl
Ensembl
MGI
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr 2:63,119,559...63,840,826
Ensembl chr 2:63,119,559...63,827,843
JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:3709803|PMID:11875276) MGI PMID:11875276 MGI:3709803 NCBI chr 3:10,324,023...10,708,007
Ensembl chr 3:10,324,023...10,708,007
JBrowse link
G CDH23 cadherin related 23 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3526751|PMID:15537665)
(MGI:75953|PMID:7610888), (MGI:81497|PMID:8790740), (MGI:86134|PMID:9039475)
(MGI:1929001|PMID:11138008), (MGI:3686545|PMID:17050716), (MGI:5468200|PMID:23217710)
(MGI:3625226|PMID:12121736)
(MGI:1933915|PMID:11322776)
MGI
Ensembl
Ensembl
PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... GO_REF:0000107 MGI:1929001 MGI:1933915 MGI:3526751 MGI:3625226 MGI:3686545 MGI:5468200 MGI:75953 MGI:81497 MGI:86134 NCBI chr10:71,396,920...71,815,947
Ensembl chr10:71,396,920...71,815,947
JBrowse link
G CLIC5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (MGI:3663248|PMID:17021174) MGI PMID:17021174 MGI:3663248 NCBI chr 6:45,880,827...46,129,819
Ensembl chr 6:45,880,827...46,080,348
JBrowse link
G CLRN1 clarin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3849925|PMID:19414487), (MGI:4353469|PMID:19423712) MGI
Ensembl
Ensembl
PMID:19414487 PMID:19423712 GO_REF:0000107 MGI:3849925 MGI:4353469 NCBI chr 3:150,926,163...150,972,999
Ensembl chr 3:150,926,163...150,972,727
JBrowse link
G CLRN2 clarin 2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:17,515,165...17,527,104
Ensembl chr 4:17,515,165...17,527,104
JBrowse link
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6278501|PMID:30380417) MGI
Ensembl
Ensembl
PMID:30380417 GO_REF:0000107 MGI:6278501 NCBI chr 5:145,857,670...145,931,673
Ensembl chr 5:145,858,521...145,937,126
JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578102|PMID:15905332)
(MGI:3759710|PMID:17876667), (MGI:5468200|PMID:23217710)
MGI
Ensembl
Ensembl
PMID:15905332 PMID:17876667 PMID:23217710 GO_REF:0000107 MGI:3578102 MGI:3759710 MGI:5468200 NCBI chr 6:35,805,352...35,824,070
Ensembl chr 6:35,797,206...35,845,397
JBrowse link
G MYO3A myosin IIIA involved_in ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chr10:25,934,229...26,212,532
Ensembl chr10:25,934,229...26,212,532
JBrowse link
G MYO3B myosin IIIB involved_in ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chr 2:170,178,147...170,655,167
Ensembl chr 2:170,178,145...170,655,171
JBrowse link
G MYO7A myosin VIIA acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3686545|PMID:17050716)
(MGI:2156358|PMID:11753415)
(MGI:3625226|PMID:12121736)
MGI
Ensembl
Ensembl
PMID:11753415 PMID:12121736 PMID:17050716 GO_REF:0000107 MGI:2156358 MGI:3625226 MGI:3686545 NCBI chr11:77,128,246...77,215,241
Ensembl chr11:77,128,246...77,215,241
JBrowse link
G NHERF1 NHERF family PDZ scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5578076|PMID:24920589) Ensembl
Ensembl
MGI
PMID:24920589 GO_REF:0000107 MGI:5578076 NCBI chr17:74,748,628...74,769,353
Ensembl chr17:74,748,628...74,769,353
JBrowse link
G PCDH15 protocadherin related 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3619110|PMID:11124469)
(MGI:1928787|PMID:10978835)
(MGI:5468200|PMID:23217710)
(MGI:3654702|PMID:16887306)
(MGI:3526751|PMID:15537665)
Ensembl
MGI
Ensembl
PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 GO_REF:0000107 MGI:1928787 MGI:3526751 MGI:3619110 MGI:3654702 MGI:5468200 NCBI chr10:53,802,771...55,627,942
Ensembl chr10:53,802,771...55,627,942
JBrowse link
G PDZD7 PDZ domain containing 7 acts_upstream_of_or_within
involved_in
ISS
IBA
IEA
(PMID:21873635) UniProt
GO_Central
UniProt
Ensembl
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr10:101,007,679...101,031,129
Ensembl chr10:101,007,679...101,032,295
JBrowse link
G PLS1 plastin 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:142,596,393...142,713,664
Ensembl chr 3:142,596,393...142,713,664
JBrowse link
G REST RE1 silencing transcription factor involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 4:56,907,900...56,935,844
Ensembl chr 4:56,907,876...56,966,808
JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:24,804,284...25,042,168
Ensembl chr 6:24,804,282...25,042,170
JBrowse link
G SCRIB scribble planar cell polarity protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439427|PMID:20215345) MGI
Ensembl
Ensembl
PMID:20215345 GO_REF:0000107 MGI:4439427 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773
JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439427|PMID:20215345) MGI
Ensembl
Ensembl
PMID:20215345 GO_REF:0000107 MGI:4439427 NCBI chr 4:109,433,815...109,540,896
Ensembl chr 4:109,433,772...109,540,896
JBrowse link
G SOD1 superoxide dismutase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:1344578|PMID:10466888), (MGI:3700629|PMID:10464373) MGI
Ensembl
UniProt
UniProt
PMID:10464373 PMID:10466888 GO_REF:0000024 GO_REF:0000107 MGI:1344578 MGI:3700629 NCBI chr21:31,659,693...31,668,931
Ensembl chr21:31,659,666...31,668,931
JBrowse link
G STRC stereocilin involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3818235|PMID:18849963) UniProt
UniProt
Ensembl
MGI
PMID:18849963 GO_REF:0000024 GO_REF:0000107 MGI:3818235 NCBI chr15:43,599,563...43,618,800
Ensembl chr15:43,599,563...43,618,800
JBrowse link
G TPRN taperin involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:6278501|PMID:30380417)
GO_Central
GO_Central
Ensembl
MGI
PMID:21873635 PMID:30380417 GO_REF:0000107 MGI:6278501 NCBI chr 9:137,191,619...137,200,741
Ensembl chr 9:137,191,617...137,204,193
JBrowse link
G TRIOBP TRIO and F-actin binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4881391|PMID:20510926) MGI
Ensembl
Ensembl
PMID:20510926 GO_REF:0000107 MGI:4881391 NCBI chr22:37,697,048...37,776,556
Ensembl chr22:37,697,048...37,776,556
JBrowse link
G WHRN whirlin acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:5796227|PMID:27117407)
(PMID:21873635)
MGI
Ensembl
GO_Central
GO_Central
PMID:21873635 PMID:27117407 GO_REF:0000107 MGI:5796227 NCBI chr 9:114,402,080...114,505,473
Ensembl chr 9:114,402,080...114,505,473
JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:1891551|PMID:11029008) MGI PMID:11029008 MGI:1891551 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G MED12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4839483|PMID:20630950) Ensembl
Ensembl
MGI
PMID:20630950 GO_REF:0000107 MGI:4839483 NCBI chr  X:71,118,596...71,142,450
Ensembl chr  X:71,118,543...71,144,103
JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1891551|PMID:11029008) MGI
Ensembl
Ensembl
PMID:11029008 GO_REF:0000107 MGI:1891551 NCBI chr 1:228,006,998...228,061,271
Ensembl chr 1:228,006,998...228,061,271
JBrowse link
blood vessel endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCM2 CCM2 scaffold protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3837878|PMID:19151727) MGI
Ensembl
Ensembl
PMID:19151727 GO_REF:0000107 MGI:3837878 NCBI chr 7:44,999,746...45,076,470
Ensembl chr 7:44,999,475...45,076,469
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO (MGI:3040159|PMID:15107403) MGI PMID:15107403 MGI:3040159 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,762,371...79,767,857
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3040159|PMID:15107403) Ensembl
MGI
PMID:15107403 GO_REF:0000107 MGI:3040159 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269
JBrowse link
G KDR kinase insert domain receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3529425|PMID:15644447) Ensembl
MGI
PMID:15644447 GO_REF:0000107 MGI:3529425 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G PROX1 prospero homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2177970|PMID:11927535) Ensembl
MGI
PMID:11927535 GO_REF:0000107 MGI:2177970 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
blood vessel endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131
JBrowse link
blood vessel lumenization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131
JBrowse link
BMP signaling pathway involved in nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IDA (PMID:10021330) UniProt
UniProt
PMID:10021330 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3814777|PMID:18614704) MGI
Ensembl
Ensembl
PMID:18614704 GO_REF:0000107 MGI:3814777 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
branch elongation involved in salivary gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703378|PMID:15972105) MGI
Ensembl
Ensembl
PMID:15972105 GO_REF:0000107 MGI:3703378 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3703378|PMID:15972105) UniProt
UniProt
MGI
PMID:15972105 GO_REF:0000024 MGI:3703378 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in IDA (PMID:11731227) UniProt
UniProt
PMID:11731227 NCBI chr 5:142,592,178...142,698,070
Ensembl chr 5:142,592,178...142,698,070
JBrowse link
branch elongation of an epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXD13 homeobox D13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:86772|PMID:9097018) Ensembl
Ensembl
MGI
PMID:9097018 GO_REF:0000107 MGI:86772 NCBI chr 2:176,087,487...176,095,944
Ensembl chr 2:176,092,721...176,095,944
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703113|PMID:17078885) Ensembl
MGI
Ensembl
PMID:17078885 GO_REF:0000107 MGI:3703113 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:1889403 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IMP (PMID:20818663) BHF-UCL
BHF-UCL
PMID:20818663 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,157
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IMP
IEA
IC
(MGI:2675534|PMID:12975353)
(PMID:20123964)
(MGI:3833040|PMID:19154719)
MGI
BHF-UCL
Ensembl
BHF-UCL
PMID:12975353 PMID:19154719 PMID:20123964 GO_REF:0000107 MGI:2675534 MGI:3833040 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chr10:44,370,165...44,385,097
Ensembl chr10:44,370,165...44,386,493
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:3578491 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,119,177
JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073
JBrowse link
G EDN1 endothelin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:74210|PMID:7615798) MGI
Ensembl
Ensembl
PMID:7615798 GO_REF:0000107 MGI:74210 NCBI chr 6:12,256,484...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EDNRA endothelin receptor type A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3606840|PMID:15664398) Ensembl
Ensembl
MGI
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954
JBrowse link
G ENG endoglin involved_in ISS
IEA
(PMID:8194490) BHF-UCL
BHF-UCL
Ensembl
PMID:8194490 GO_REF:0000107 NCBI chr 9:127,815,012...127,854,773
Ensembl chr 9:127,815,013...127,854,658
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588904|PMID:15996652) Ensembl
Ensembl
MGI
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:3045573 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145
JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3606840|PMID:15664398) MGI
Ensembl
Ensembl
PMID:15664398 GO_REF:0000107 MGI:3606840 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728
JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588904|PMID:15996652) MGI
Ensembl
Ensembl
PMID:15996652 GO_REF:0000107 MGI:3588904 NCBI chr 2:236,161,340...236,168,386
Ensembl chr 2:236,165,236...236,168,386
JBrowse link
G GDF2 growth differentiation factor 2 involved_in IDA
IEA
(PMID:20406889) DFLAT
DFLAT
Ensembl
PMID:20406889 GO_REF:0000107 NCBI chr10:47,322,454...47,327,588
Ensembl chr10:47,322,454...47,327,588
JBrowse link
G GNA13 G protein subunit alpha 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583513|PMID:15919816) Ensembl
MGI
Ensembl
PMID:15919816 GO_REF:0000107 MGI:3583513 NCBI chr17:65,009,289...65,056,740
Ensembl chr17:65,009,289...65,056,740
JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3574706|PMID:15689378) MGI
Ensembl
Ensembl
PMID:15689378 GO_REF:0000107 MGI:3574706 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within IMP (PMID:23688497) BHF-UCL
BHF-UCL
PMID:23688497 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833040|PMID:19154719) MGI
Ensembl
Ensembl
PMID:19154719 GO_REF:0000107 MGI:3833040 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956
JBrowse link
G MIR15B microRNA 15b acts_upstream_of IMP (PMID:23688497) BHF-UCL PMID:23688497 NCBI chr 3:160,404,588...160,404,685
Ensembl chr 3:160,404,588...160,404,685
JBrowse link
G MIR16-1 microRNA 16-1 acts_upstream_of IDA (PMID:23083510) BHF-UCL PMID:23083510 NCBI chr13:50,048,973...50,049,061
Ensembl chr13:50,048,973...50,049,061
JBrowse link
G MIR16-2 microRNA 16-2 acts_upstream_of IDA (PMID:23083510) BHF-UCL PMID:23083510 NCBI chr 3:160,404,745...160,404,825
Ensembl chr 3:160,404,745...160,404,825
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:2136698 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136698|PMID:11439183) MGI
Ensembl
Ensembl
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
G NOTCH4 notch receptor 4 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:32,194,843...32,224,067
Ensembl chr 6:32,194,843...32,224,067
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3833040|PMID:19154719)
GO_Central
GO_Central
Ensembl
MGI
PMID:19154719 PMID:21873635 GO_REF:0000107 MGI:3833040 NCBI chr 9:137,299,631...137,302,271
Ensembl chr 9:137,299,631...137,302,271
JBrowse link
G NRP1 neuropilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:3710026|PMID:17428830)
(PMID:24401374)
MGI
Ensembl
BHF-UCL
BHF-UCL
PMID:17428830 PMID:24401374 GO_REF:0000024 GO_REF:0000107 MGI:3710026 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:2389284|PMID:12397115) MGI PMID:12397115 MGI:2389284 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
G PLXND1 plexin D1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3050159|PMID:15239958)
(MGI:5509072|PMID:23918385)
MGI
Ensembl
Ensembl
PMID:15239958 PMID:23918385 GO_REF:0000107 MGI:3050159 MGI:5509072 NCBI chr 3:129,555,214...129,606,676
Ensembl chr 3:129,555,214...129,606,676
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2136698|PMID:11439183) Ensembl
MGI
PMID:11439183 GO_REF:0000107 MGI:2136698 NCBI chr 2:68,178,857...68,252,532
Ensembl chr 2:68,178,857...68,256,237
JBrowse link
G RBM15 RNA binding motif protein 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3833189|PMID:18981216) Ensembl
Ensembl
MGI
PMID:18981216 GO_REF:0000107 MGI:3833189 NCBI chr 1:110,339,377...110,346,677
Ensembl chr 1:110,338,506...110,346,681
JBrowse link
G SEMA3E semaphorin 3E involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:83,363,238...83,649,139
Ensembl chr 7:83,363,238...83,649,139
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chr 5:9,035,033...9,546,075
Ensembl chr 5:9,035,033...9,546,075
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:3583396|PMID:15936751) MGI
Ensembl
UniProt
UniProt
PMID:15936751 GO_REF:0000024 GO_REF:0000107 MGI:3583396 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3811944|PMID:18804439) Ensembl
Ensembl
MGI
PMID:18804439 GO_REF:0000107 MGI:3811944 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G STK4 serine/threonine kinase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412133|PMID:19786569) MGI
Ensembl
Ensembl
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr20:44,966,512...45,080,021
Ensembl chr20:44,966,494...45,080,021
JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578574|PMID:15843414) Ensembl
Ensembl
MGI
PMID:15843414 GO_REF:0000107 MGI:3578574 NCBI chr 7:35,202,430...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:3703113|PMID:17078885) MGI
Ensembl
BHF-UCL
BHF-UCL
PMID:17078885 GO_REF:0000024 GO_REF:0000107 MGI:3703113 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,601...30,694,142
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
IMP (PMID:23083510), (PMID:23688497)
(PMID:23688497)
ComplexPortal
BHF-UCL
BHF-UCL
PMID:23083510 PMID:23688497 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3689296|PMID:16981008) MGI
Ensembl
Ensembl
PMID:16981008 GO_REF:0000107 MGI:3689296 NCBI chr11:10,305,073...10,307,397
Ensembl chr11:10,305,073...10,307,397
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:1197797|PMID:9435295) MGI
UniProt
UniProt
PMID:9435295 GO_REF:0000024 MGI:1197797 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FZD5 frizzled class receptor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5494335|PMID:23610556) MGI
Ensembl
Ensembl
PMID:23610556 GO_REF:0000107 MGI:5494335 NCBI chr 2:207,762,598...207,769,906
Ensembl chr 2:207,762,598...207,769,906
JBrowse link
G GCM1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1860502|PMID:10888880) Ensembl
Ensembl
MGI
PMID:10888880 GO_REF:0000107 MGI:1860502 NCBI chr 6:53,126,961...53,148,841
Ensembl chr 6:53,126,961...53,148,841
JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1934095|PMID:11369229) Ensembl
Ensembl
MGI
PMID:11369229 GO_REF:0000107 MGI:1934095 NCBI chr17:75,318,076...75,405,678
Ensembl chr17:75,318,076...75,405,709
JBrowse link
G IL10 interleukin 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3664708|PMID:12842419) MGI
Ensembl
Ensembl
PMID:12842419 GO_REF:0000107 MGI:3664708 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO (MGI:5052233|PMID:21606200) MGI PMID:21606200 MGI:5052233 NCBI chr17:75,525,002...75,575,209
Ensembl chr17:75,525,080...75,575,209
JBrowse link
G RSPO3 R-spondin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695333|PMID:16963017) MGI
Ensembl
Ensembl
PMID:16963017 GO_REF:0000107 MGI:3695333 NCBI chr 6:127,118,671...127,199,481
Ensembl chr 6:127,118,671...127,199,481
JBrowse link
G SOCS3 suppressor of cytokine signaling 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2137984|PMID:11481489) MGI
Ensembl
Ensembl
PMID:11481489 GO_REF:0000107 MGI:2137984 NCBI chr17:78,356,778...78,360,925
Ensembl chr17:78,356,778...78,360,077
JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3700412|PMID:17174946) MGI
Ensembl
Ensembl
PMID:17174946 GO_REF:0000107 MGI:3700412 NCBI chr15:40,844,048...40,858,207
Ensembl chr15:40,844,018...40,858,207
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6260081|PMID:30236446) MGI
Ensembl
Ensembl
PMID:30236446 GO_REF:0000107 MGI:6260081 NCBI chr12:123,584,552...123,598,582
Ensembl chr12:123,584,533...123,598,582
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:3848105 NCBI chr18:79,395,930...79,529,323
Ensembl chr18:79,395,856...79,529,325
JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:43,300,982...43,323,108
Ensembl chr 1:43,300,982...43,323,108
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3054694|PMID:15340078) MGI
Ensembl
Ensembl
PMID:15340078 GO_REF:0000107 MGI:3054694 NCBI chr10:101,354,048...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CCL11 C-C motif chemokine ligand 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3640884|PMID:10804170) MGI
Ensembl
Ensembl
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr17:34,285,742...34,288,334
Ensembl chr17:34,285,742...34,288,334
JBrowse link
G CSF1 colony stimulating factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3640884|PMID:10804170) MGI
Ensembl
Ensembl
PMID:10804170 GO_REF:0000107 MGI:3640884 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1932625|PMID:11283268) Ensembl
Ensembl
MGI
PMID:11283268 GO_REF:0000107 MGI:1932625 NCBI chr 6:30,880,970...30,900,156
Ensembl chr 6:30,876,421...30,900,156
JBrowse link
G EPHA2 EPH receptor A2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:16,124,337...16,156,069
Ensembl chr 1:16,124,337...16,156,069
JBrowse link
G ETV4 ETS variant transcription factor 4 acts_upstream_of_or_within ISO (MGI:2667785|PMID:12871699)
(MGI:3828920|PMID:18977342)
MGI PMID:12871699 PMID:18977342 MGI:2667785 MGI:3828920 NCBI chr17:43,527,846...43,546,340
Ensembl chr17:43,527,844...43,579,620
JBrowse link
G KDM5B lysine demethylase 5B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5619178|PMID:24802759) MGI
Ensembl
Ensembl
PMID:24802759 GO_REF:0000107 MGI:5619178 NCBI chr 1:202,724,495...202,808,421
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:3692480|PMID:16973609)
(PMID:21873635)
MGI
GO_Central
Ensembl
GO_Central
PMID:16973609 PMID:21873635 GO_REF:0000107 MGI:3692480 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275
JBrowse link
G LRP5L LDL receptor related protein 5 like (pseudogene) involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr22:25,351,418...25,405,408
Ensembl chr22:25,351,612...25,405,274
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G MSX2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1355063|PMID:10742104) Ensembl
MGI
Ensembl
PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chr 5:174,724,582...174,730,896
Ensembl chr 5:174,724,582...174,730,896
JBrowse link
G PML PML nuclear body scaffold acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3839212|PMID:19261859) MGI
Ensembl
Ensembl
PMID:19261859 GO_REF:0000107 MGI:3839212 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G SLC12A2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:2180693|PMID:8864124) MGI PMID:8864124 MGI:2180693 NCBI chr 5:128,083,766...128,189,677
Ensembl chr 5:128,083,766...128,189,677
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589531|PMID:16007215) MGI
Ensembl
Ensembl
PMID:16007215 GO_REF:0000107 MGI:3589531 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608166|PMID:16222716) MGI
Ensembl
Ensembl
PMID:16222716 GO_REF:0000107 MGI:3608166 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
branching involved in pancreas morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROX1 prospero homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5317511|PMID:22178591) MGI
Ensembl
Ensembl
PMID:22178591 GO_REF:0000107 MGI:5317511 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
branching involved in prostate gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934513|PMID:11401393) MGI
Ensembl
Ensembl
PMID:11401393 GO_REF:0000107 MGI:1934513 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CD44 CD44 molecule (Indian blood group) acts_upstream_of_or_within ISO (MGI:1098910|PMID:9374396) MGI PMID:9374396 MGI:1098910 NCBI chr11:35,139,171...35,232,402
Ensembl chr11:35,138,882...35,232,402
JBrowse link
G FEM1B fem-1 homolog B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3809320|PMID:18816836) Ensembl
Ensembl
MGI
PMID:18816836 GO_REF:0000107 MGI:3809320 NCBI chr15:68,277,745...68,295,862
Ensembl chr15:68,277,745...68,295,862
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3703455|PMID:17215304)
(MGI:2655013|PMID:12666202), (MGI:3703479|PMID:17202188)
UniProt
UniProt
MGI
PMID:12666202 PMID:17202188 PMID:17215304 GO_REF:0000024 MGI:2655013 MGI:3703455 MGI:3703479 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G HOXA13 homeobox A13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1336094|PMID:10210434) Ensembl
Ensembl
MGI
PMID:10210434 GO_REF:0000107 MGI:1336094 NCBI chr 7:27,194,364...27,200,091
Ensembl chr 7:27,193,503...27,200,091
JBrowse link
G NKX3-1 NK3 homeobox 1 acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:1891543|PMID:11002344)
(MGI:1335939|PMID:10215624)
(MGI:1861552|PMID:10906459)
MGI
UniProt
Ensembl
UniProt
PMID:10215624 PMID:10906459 PMID:11002344 GO_REF:0000024 GO_REF:0000107 MGI:1335939 MGI:1861552 MGI:1891543 NCBI chr 8:23,678,693...23,682,938
Ensembl chr 8:23,678,697...23,682,938
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335656|PMID:10208740) MGI
Ensembl
PMID:10208740 GO_REF:0000107 MGI:1335656 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
branching involved in salivary gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2158598|PMID:11731698) MGI
Ensembl
Ensembl
PMID:11731698 GO_REF:0000107 MGI:2158598 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G DAG1 dystroglycan 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2156962|PMID:11798066) MGI
Ensembl
Ensembl
PMID:11798066 GO_REF:0000107 MGI:2156962 NCBI chr 3:49,468,948...49,535,615
Ensembl chr 3:49,468,713...49,535,618
JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within ISO (MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:5699497 NCBI chr 8:94,641,174...94,707,466
Ensembl chr 8:94,641,074...94,707,466
JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5699497|PMID:26371508) Ensembl
Ensembl
MGI
PMID:26371508 GO_REF:0000107 MGI:5699497 NCBI chr16:68,229,033...68,236,127
Ensembl chr16:68,229,033...68,238,102
JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703378|PMID:15972105)
(MGI:3813176|PMID:18559345)
MGI
Ensembl
PMID:15972105 PMID:18559345 GO_REF:0000107 MGI:3703378 MGI:3813176 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGF7 fibroblast growth factor 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3813176|PMID:18559345) Ensembl
Ensembl
MGI
PMID:18559345 GO_REF:0000107 MGI:3813176 NCBI chr15:49,423,242...49,488,775
Ensembl chr15:49,423,237...49,488,775
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3039063|PMID:15042696)
(MGI:3051949|PMID:15063181)
Ensembl
Ensembl
MGI
PMID:15042696 PMID:15063181 GO_REF:0000107 MGI:3039063 MGI:3051949 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:2389013|PMID:12421715), (MGI:3813176|PMID:18559345) MGI PMID:12421715 PMID:18559345 MGI:2389013 MGI:3813176 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:2158598|PMID:11731698) MGI
UniProt
UniProt
PMID:11731698 GO_REF:0000024 MGI:2158598 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G IL6 interleukin 6 acts_upstream_of_or_within ISO (MGI:1932624|PMID:11275690) MGI PMID:11275690 MGI:1932624 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2156962|PMID:11798066) Ensembl
Ensembl
MGI
PMID:11798066 GO_REF:0000107 MGI:2156962 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2678847|PMID:14568553) Ensembl
Ensembl
MGI
PMID:14568553 GO_REF:0000107 MGI:2678847 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (MGI:3813176|PMID:18559345) MGI PMID:18559345 MGI:3813176 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3039063|PMID:15042696) MGI
Ensembl
Ensembl
PMID:15042696 GO_REF:0000107 MGI:3039063 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G TGM2 transglutaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588002|PMID:15970210) Ensembl
Ensembl
MGI
PMID:15970210 GO_REF:0000107 MGI:3588002 NCBI chr20:38,127,385...38,168,475
Ensembl chr20:38,127,385...38,166,578
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5504318|PMID:23661704) MGI
Ensembl
Ensembl
PMID:23661704 GO_REF:0000107 MGI:5504318 NCBI chr 5:5,140,330...5,320,304
Ensembl chr 5:5,140,330...5,320,304
JBrowse link
G AGT angiotensinogen NOT|acts_upstream_of_or_within ISO (MGI:77583|PMID:8675666)
(MGI:2655949|PMID:12657564)
MGI PMID:8675666 PMID:12657564 MGI:2655949 MGI:77583 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3768986|PMID:16672320)
(MGI:3036971|PMID:14699151)
MGI
Ensembl
Ensembl
PMID:14699151 PMID:16672320 GO_REF:0000107 MGI:3036971 MGI:3768986 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:3583399|PMID:15925496) MGI
Ensembl
UniProt
UniProt
PMID:15925496 GO_REF:0000024 GO_REF:0000107 MGI:3583399 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246
JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IDA
IEA
(MGI:3714585|PMID:17522159)
(PMID:12631064)
MGI
UniProt
Ensembl
UniProt
PMID:12631064 PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CD44 CD44 molecule (Indian blood group) acts_upstream_of_or_within ISO (MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:2449954 NCBI chr11:35,139,171...35,232,402
Ensembl chr11:35,138,882...35,232,402
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 NOT|involved_in ISO
ISS
(MGI:3717986|PMID:17615577) UniProt
UniProt
UniProt
PMID:17615577 GO_REF:0000024 MGI:3717986 NCBI chr  X:72,301,646...72,307,157
Ensembl chr  X:72,301,638...72,307,187
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714576|PMID:17537789) MGI
Ensembl
Ensembl
PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3757813|PMID:17803964) MGI
Ensembl
Ensembl
PMID:17803964 GO_REF:0000107 MGI:3757813 NCBI chr 1:9,848,276...9,910,269
Ensembl chr 1:9,848,276...9,910,336
JBrowse link
G DCHS1 dachsous cadherin-related 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4939936|PMID:21303848) MGI
Ensembl
Ensembl
PMID:21303848 GO_REF:0000107 MGI:4939936 NCBI chr11:6,621,330...6,655,809
Ensembl chr11:6,621,330...6,655,809
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3688770|PMID:16105026)
(MGI:3709697|PMID:17435047)
(MGI:3699022|PMID:17172448)
MGI
Ensembl
Ensembl
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 MGI:3688770 MGI:3699022 MGI:3709697 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:3686561 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662002|PMID:12783782) Ensembl
Ensembl
MGI
PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G FAT4 FAT atypical cadherin 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4939936|PMID:21303848) MGI
Ensembl
Ensembl
PMID:21303848 GO_REF:0000107 MGI:4939936 NCBI chr 4:125,314,955...125,492,932
Ensembl chr 4:125,314,918...125,492,932
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in IDA (PMID:12631064) UniProt
UniProt
PMID:12631064 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,708...122,898,236
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603080|PMID:16049111) Ensembl
Ensembl
MGI
PMID:16049111 GO_REF:0000107 MGI:3603080 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675756|PMID:13678594) MGI
Ensembl
PMID:13678594 GO_REF:0000107 MGI:2675756 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777
JBrowse link
G GDNF glial cell derived neurotrophic factor acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:2675756|PMID:13678594), (MGI:4949995|PMID:21281623) MGI
Ensembl
UniProt
UniProt
PMID:13678594 PMID:21281623 GO_REF:0000024 GO_REF:0000107 MGI:2675756 MGI:4949995 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611729|PMID:16396903) MGI
Ensembl
Ensembl
PMID:16396903 GO_REF:0000107 MGI:3611729 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583399|PMID:15925496) Ensembl
Ensembl
MGI
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr  X:133,535,745...133,985,594
Ensembl chr  X:133,535,745...133,987,100
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6094060|PMID:29100091) Ensembl
Ensembl
MGI
PMID:29100091 GO_REF:0000107 MGI:6094060 NCBI chr18:21,242,232...21,526,112
Ensembl chr18:21,242,232...21,526,112
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2683817|PMID:14522971) Ensembl
Ensembl
MGI
PMID:14522971 GO_REF:0000107 MGI:2683817 NCBI chr20:23,361,127...23,373,062
Ensembl chr20:23,362,182...23,373,062
JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:2135652|PMID:11493536) MGI
UniProt
Ensembl
UniProt
PMID:11493536 GO_REF:0000024 GO_REF:0000107 MGI:2135652 NCBI chr 7:27,181,157...27,185,232
Ensembl chr 7:27,181,157...27,185,232
JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:2135652|PMID:11493536) MGI
UniProt
UniProt
PMID:11493536 GO_REF:0000024 MGI:2135652 NCBI chr 2:176,107,280...176,115,679
Ensembl chr 2:176,104,216...176,109,754
JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:13,494,032...13,601,929
Ensembl chr17:13,494,032...13,601,929
JBrowse link
G HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,301,081...14,349,404
Ensembl chr17:14,301,081...14,349,404
JBrowse link
G ILK integrin linked kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr11:6,603,774...6,610,870
Ensembl chr11:6,603,708...6,610,874
JBrowse link
G LAMA5 laminin subunit alpha 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2678847|PMID:14568553) Ensembl
Ensembl
MGI
PMID:14568553 GO_REF:0000107 MGI:2678847 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G NPNT nephronectin acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:3714574|PMID:17537792)
(PMID:15754038)
MGI
BHF-UCL
Ensembl
BHF-UCL
PMID:15754038 PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027
JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within
ISS
IEP
ISO
(PMID:1337742)
(MGI:3768986|PMID:16672320)
UniProt
UniProt
MGI
PMID:1337742 PMID:16672320 GO_REF:0000024 MGI:3768986 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PAX8 paired box 8 involved_in IEP (PMID:1337742) UniProt
UniProt
PMID:1337742 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
G PBX1 PBX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2451200|PMID:12591246) MGI
Ensembl
Ensembl
PMID:12591246 GO_REF:0000107 MGI:2451200 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296
JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:2675756 NCBI chr14:74,941,830...74,955,764
Ensembl chr14:74,941,834...74,955,626
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEP (PMID:11891195) UniProt
UniProt
PMID:11891195 NCBI chr 4:88,007,635...88,077,777
Ensembl chr 4:88,007,635...88,077,777
JBrowse link
G PSPN persephin acts_upstream_of_or_within ISO (MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:1196665 NCBI chr19:6,375,148...6,375,933
Ensembl chr19:6,375,148...6,379,058
JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367286|PMID:19809516) MGI
Ensembl
Ensembl
PMID:19809516 GO_REF:0000107 MGI:4367286 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of
ISS
ISO
(MGI:5563280|PMID:24550112) UniProt
MGI
UniProt
PMID:24550112 GO_REF:0000024 MGI:5563280 NCBI chr16:51,135,982...51,152,334
Ensembl chr16:51,135,982...51,152,334
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3611729|PMID:16396903) UniProt
Ensembl
UniProt
MGI
PMID:16396903 GO_REF:0000024 GO_REF:0000107 MGI:3611729 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SIX1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:2662002|PMID:12783782) MGI
Ensembl
UniProt
UniProt
PMID:12783782 GO_REF:0000024 GO_REF:0000107 MGI:2662002 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583399|PMID:15925496) Ensembl
MGI
Ensembl
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TCF21 transcription factor 21 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1202620|PMID:9507058)
(MGI:1347485|PMID:10572052)
BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:9507058 PMID:10572052 GO_REF:0000024 GO_REF:0000107 MGI:1202620 MGI:1347485 NCBI chr 6:133,889,113...133,895,537
Ensembl chr 6:133,889,113...133,895,553
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 MGI
RGD
PMID:10963667 RGD:2308864 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TMEM59L transmembrane protein 59 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,612,870...18,621,039
Ensembl chr19:18,607,430...18,621,039
JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2178881|PMID:11948913) Ensembl
Ensembl
MGI
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr 2:218,859,805...218,874,233
Ensembl chr 2:218,859,805...218,874,233
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588895|PMID:16054034) Ensembl
Ensembl
MGI
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
G WT1 WT1 transcription factor involved_in IGI (PMID:10101119) UniProt
UniProt
PMID:10101119 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
JBrowse link
branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO (MGI:3052392|PMID:15282149)
(MGI:2178150|PMID:11900463)
MGI PMID:11900463 PMID:15282149 MGI:2178150 MGI:3052392 NCBI chr 9:33,104,077...33,185,089
Ensembl chr 9:33,104,082...33,167,356
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IDA (PMID:10706139) UniProt
UniProt
PMID:10706139 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G CASR calcium sensing receptor involved_in ISO
IEA
positive regulation RGD
Ensembl
Ensembl
PMID:20117086 GO_REF:0000107 RGD:7206840 NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,668...122,291,629
JBrowse link
G CLIC4 chloride intracellular channel 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3837628|PMID:19197003) MGI
Ensembl
Ensembl
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 1:24,745,447...24,844,321
Ensembl chr 1:24,745,382...24,844,321
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3617296|PMID:16452165) MGI PMID:16452165 MGI:3617296 NCBI chr14:95,086,228...95,158,010
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G EGF epidermal growth factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575981|PMID:15831470) Ensembl
Ensembl
MGI
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr 4:109,912,883...110,013,766
Ensembl chr 4:109,912,883...110,013,766
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IDA (PMID:17959718) UniProt
UniProt
PMID:17959718 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G GDF7 growth differentiation factor 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934988|PMID:11356025) MGI
Ensembl
Ensembl
PMID:11356025 GO_REF:0000107 MGI:1934988 NCBI chr 2:20,667,144...20,679,243
Ensembl chr 2:20,667,144...20,679,243
JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:1277743|PMID:9731531) MGI
UniProt
Ensembl
Ensembl
UniProt
PMID:9731531 GO_REF:0000024 GO_REF:0000107 MGI:1277743 NCBI chr 2:120,735,868...120,992,653
Ensembl chr 2:120,735,623...120,992,653
JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608164|PMID:16247775) MGI
Ensembl
PMID:16247775 GO_REF:0000107 MGI:3608164 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430439|PMID:20040500) MGI
Ensembl
Ensembl
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (MGI:3616136|PMID:15059953) MGI PMID:15059953 MGI:3616136 NCBI chr12:102,395,874...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3613102|PMID:16375885) MGI
Ensembl
PMID:16375885 GO_REF:0000107 MGI:3613102 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G LAMA5 laminin subunit alpha 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2678847|PMID:14568553) MGI
Ensembl
PMID:14568553 GO_REF:0000107 MGI:2678847 NCBI chr20:62,309,065...62,367,312
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IMP (PMID:16153003) UniProt
UniProt
PMID:16153003 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MGP matrix Gla protein ISO fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr12:14,880,864...14,885,854
Ensembl chr12:14,880,864...14,885,857
JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:58,205,441...58,219,255
Ensembl chr17:58,205,441...58,219,605
JBrowse link
G MMP14 matrix metallopeptidase 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3527919|PMID:15572153) MGI
Ensembl
Ensembl
PMID:15572153 GO_REF:0000107 MGI:3527919 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,041
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3574742|PMID:15716345) MGI
Ensembl
PMID:15716345 GO_REF:0000107 MGI:3574742 NCBI chr 2:15,940,550...15,947,004
Ensembl chr 2:15,940,550...15,947,007
JBrowse link
G NKX3-1 NK3 homeobox 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1891543|PMID:11002344) UniProt
Ensembl
UniProt
MGI
PMID:11002344 GO_REF:0000024 GO_REF:0000107 MGI:1891543 NCBI chr 8:23,678,693...23,682,938
Ensembl chr 8:23,678,697...23,682,938
JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3529381|PMID:15064243) Ensembl
Ensembl
MGI
PMID:15064243 GO_REF:0000107 MGI:3529381 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 involved_in IMP (PMID:20457839) UniProt
UniProt
PMID:20457839 NCBI chr11:77,322,017...77,530,009
Ensembl chr11:77,322,017...77,474,635
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in IDA
IEA
(PMID:12482949) UniProt
Ensembl
UniProt
PMID:12482949 GO_REF:0000107 NCBI chr16:2,088,708...2,135,898
Ensembl chr16:2,088,708...2,135,898
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin acts_upstream_of_positive_effect
involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:4880601|PMID:20875407) UniProt
Ensembl
UniProt
UniProt
PMID:20875407 GO_REF:0000024 GO_REF:0000107 MGI:4880601 NCBI chr 6:51,615,299...52,087,615
Ensembl chr 6:51,615,299...52,087,613
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3039057|PMID:15042703) MGI
Ensembl
Ensembl
PMID:15042703 GO_REF:0000107 MGI:3039057 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PXN paxillin acts_upstream_of_or_within ISO (MGI:2680875|PMID:14636584) MGI PMID:14636584 MGI:2680875 NCBI chr12:120,210,447...120,265,730
Ensembl chr12:120,210,439...120,265,771
JBrowse link
G RASIP1 Ras interacting protein 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:48,720,585...48,740,610
Ensembl chr19:48,720,585...48,740,610
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:3575993 NCBI chr 5:9,035,033...9,546,075
Ensembl chr 5:9,035,033...9,546,075
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:1289788|PMID:9768363)
(MGI:3050270|PMID:15305287)
(MGI:3039063|PMID:15042696)
UniProt
UniProt
Ensembl
MGI
PMID:9768363 PMID:15042696 PMID:15305287 GO_REF:0000024 GO_REF:0000107 MGI:1289788 MGI:3039063 MGI:3050270 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IMP
IDA
(PMID:19005219)
(PMID:18345009)
UniProt
UniProt
PMID:18345009 PMID:19005219 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331548|PMID:10074434) MGI
Ensembl
PMID:10074434 GO_REF:0000107 MGI:1331548 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675515|PMID:12950082) MGI
Ensembl
Ensembl
PMID:12950082 GO_REF:0000107 MGI:2675515 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TMEM67 transmembrane protein 67 involved_in ISO (MGI:4441259|PMID:17185389) UniProt PMID:17185389 MGI:4441259 NCBI chr 8:93,754,844...93,832,653
Ensembl chr 8:93,754,844...93,819,234
JBrowse link
G VEGFA vascular endothelial growth factor A acts_upstream_of_or_within ISO (MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:3613102 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178881|PMID:11948913) MGI
Ensembl
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA (PMID:8674409) MGI
MGI
PMID:8674409 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3788965|PMID:18367557) MGI
Ensembl
Ensembl
PMID:18367557 GO_REF:0000107 MGI:3788965 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
Ensembl
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3688953|PMID:16989802) MGI
UniProt
UniProt
PMID:16989802 GO_REF:0000024 MGI:3688953 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G RDH10 retinol dehydrogenase 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709664|PMID:17473173) MGI
Ensembl
Ensembl
PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
MGI
Ensembl
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr 4:123,396,795...123,403,760
Ensembl chr 4:123,396,795...123,403,760
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5052190|PMID:21764747) Ensembl
Ensembl
MGI
PMID:21764747 GO_REF:0000107 MGI:5052190 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5586932|PMID:25043473) Ensembl
MGI
Ensembl
PMID:25043473 GO_REF:0000107 MGI:5586932 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within IDA (PMID:9740653) MGI
MGI
PMID:9740653 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1277744|PMID:9731532) MGI
Ensembl
Ensembl
PMID:9731532 GO_REF:0000107 MGI:1277744 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 acts_upstream_of_or_within ISO (MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:5300435 NCBI chr12:88,142,307...88,199,887
Ensembl chr12:88,142,296...88,199,887
JBrowse link
G TNC tenascin C ISO RGD PMID:16928692 RGD:4889612 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207
JBrowse link
cardioblast migration to the midline involved in heart field formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249
JBrowse link
carotid body glomus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581993|PMID:15878769) MGI
Ensembl
Ensembl
PMID:15878769 GO_REF:0000107 MGI:3581993 NCBI chr12:102,957,674...102,960,513
Ensembl chr12:102,957,674...102,960,513
JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHACTR4 phosphatase and actin regulator 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:28,369,740...28,500,364
Ensembl chr 1:28,369,582...28,500,364
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385
JBrowse link
club cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3695537|PMID:17164424) Ensembl
Ensembl
MGI
PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528
JBrowse link
G NFIB nuclear factor I B involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:14,081,843...14,532,077
Ensembl chr 9:14,081,843...14,398,983
JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3695537|PMID:17164424) Ensembl
MGI
PMID:17164424 GO_REF:0000107 MGI:3695537 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5440802|PMID:22797898) MGI
Ensembl
Ensembl
PMID:22797898 GO_REF:0000107 MGI:5440802 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131
JBrowse link
columnar/cuboidal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROS1 ROS proto-oncogene 1, receptor tyrosine kinase involved_in IEA
ISS
Ensembl
Ensembl
UniProt
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:117,287,353...117,425,942
Ensembl chr 6:117,287,353...117,425,942
JBrowse link
G SHROOM3 shroom family member 3 acts_upstream_of_or_within ISO (MGI:3610718|PMID:16249236) MGI PMID:16249236 MGI:3610718 NCBI chr 4:76,435,229...76,783,253
Ensembl chr 4:76,435,229...76,783,253
JBrowse link
columnar/cuboidal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMBT1 deleted in malignant brain tumors 1 acts_upstream_of ISO (MGI:3057099|PMID:15452149) MGI PMID:15452149 MGI:3057099 NCBI chr10:122,560,754...122,643,736
Ensembl chr10:122,560,665...122,643,736
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO (MGI:4950299|PMID:21385765) MGI PMID:21385765 MGI:4950299 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
columnar/cuboidal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:3624198|PMID:16624854) MGI PMID:16624854 MGI:3624198 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 acts_upstream_of_or_within ISO (MGI:3052624|PMID:15328414) MGI PMID:15328414 MGI:3052624 NCBI chr10:76,869,602...77,637,808
Ensembl chr10:76,869,601...77,638,369
JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6443509|PMID:31336344) MGI
Ensembl
Ensembl
PMID:31336344 GO_REF:0000107 MGI:6443509 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
convergent extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G NPHP3 nephrocystin 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:132,680,609...132,722,409
Ensembl chr 3:132,680,609...132,722,432
JBrowse link
G NPHP3-ACAD11 NPHP3-ACAD11 readthrough (NMD candidate) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:132,558,138...132,722,459
Ensembl chr 3:132,558,142...132,722,459
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4830023|PMID:20704721) MGI
Ensembl
Ensembl
PMID:20704721 GO_REF:0000107 MGI:4830023 NCBI chr 6:43,076,314...43,161,715
Ensembl chr 6:43,076,307...43,161,719
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714704|PMID:17433286) MGI
Ensembl
PMID:17433286 GO_REF:0000107 MGI:3714704 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
convergent extension involved in axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3793375|PMID:18257070) Ensembl
MGI
Ensembl
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chr10:97,766,751...97,771,999
Ensembl chr10:97,766,751...97,771,999
JBrowse link
G TRIM28 tripartite motif containing 28 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5300649|PMID:22110054) MGI
Ensembl
Ensembl
PMID:22110054 GO_REF:0000107 MGI:5300649 NCBI chr19:58,544,064...58,550,715
Ensembl chr19:58,544,064...58,550,722
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3703464|PMID:17229766) MGI PMID:17229766 MGI:3703464 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
G WNT11 Wnt family member 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5634837|PMID:25813538) MGI
Ensembl
Ensembl
PMID:25813538 GO_REF:0000107 MGI:5634837 NCBI chr11:76,186,325...76,210,761
Ensembl chr11:76,186,325...76,210,736
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5634837|PMID:25813538) Ensembl
Ensembl
MGI
PMID:25813538 GO_REF:0000107 MGI:5634837 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
convergent extension involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MKKS MKKS centrosomal shuttling protein involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr20:10,401,009...10,434,222
Ensembl chr20:10,401,009...10,434,222
Ensembl chr20:10,401,009...10,434,222
Ensembl chr20:10,401,009...10,434,222
JBrowse link
G NPHP3 nephrocystin 3 involved_in IGI (PMID:18371931) BHF-UCL
BHF-UCL
PMID:18371931 NCBI chr 3:132,680,609...132,722,409
Ensembl chr 3:132,680,609...132,722,432
JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DVL1 dishevelled segment polarity protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624185|PMID:16571627) MGI
Ensembl
Ensembl
PMID:16571627 GO_REF:0000107 MGI:3624185 NCBI chr 1:1,335,278...1,349,418
Ensembl chr 1:1,335,276...1,349,418
JBrowse link
G DVL2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624185|PMID:16571627) MGI
Ensembl
Ensembl
PMID:16571627 GO_REF:0000107 MGI:3624185 NCBI chr17:7,225,342...7,234,517
Ensembl chr17:7,225,342...7,234,517
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3624185|PMID:16571627), (MGI:3703464|PMID:17229766) MGI PMID:16571627 PMID:17229766 MGI:3624185 MGI:3703464 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
convergent extension involved in organogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DVL1 dishevelled segment polarity protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589836|PMID:16116426) MGI
Ensembl
PMID:16116426 GO_REF:0000107 MGI:3589836 NCBI chr 1:1,335,278...1,349,418
Ensembl chr 1:1,335,276...1,349,418
JBrowse link
G DVL2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589836|PMID:16116426) MGI
Ensembl
PMID:16116426 GO_REF:0000107 MGI:3589836 NCBI chr17:7,225,342...7,234,517
Ensembl chr17:7,225,342...7,234,517
JBrowse link
G FRZB frizzled related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714704|PMID:17433286) Ensembl
Ensembl
MGI
PMID:17433286 GO_REF:0000107 MGI:3714704 NCBI chr 2:182,833,275...182,866,637
Ensembl chr 2:182,833,275...182,866,637
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3714704|PMID:17433286) MGI PMID:17433286 MGI:3714704 NCBI chr 1:160,400,564...160,428,670
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413372|PMID:19795512)
(MGI:3714704|PMID:17433286)
MGI
Ensembl
Ensembl
PMID:17433286 PMID:19795512 GO_REF:0000107 MGI:3714704 MGI:4413372 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3793375|PMID:18257070) MGI
Ensembl
Ensembl
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473
JBrowse link
corneocyte desquamation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA12 ATP binding cassette subfamily A member 12 involved_in IMP
IEA
ISS
(PMID:19179616) UniProt
UniProt
Ensembl
PMID:19179616 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:214,931,542...215,138,626
Ensembl chr 2:214,931,542...215,138,626
JBrowse link
G CDSN corneodesmosin involved_in IMP (PMID:26014679) CAFA
CAFA
PMID:26014679 NCBI chr 6:31,115,087...31,120,446
Ensembl chr 6:31,115,087...31,120,446
JBrowse link
corneocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNASE1L2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5308183|PMID:21307874) MGI
Ensembl
Ensembl
PMID:21307874 GO_REF:0000107 MGI:5308183 NCBI chr16:2,236,444...2,238,711
Ensembl chr16:2,235,816...2,238,711
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:5607491|PMID:24872419) MGI PMID:24872419 MGI:5607491 NCBI chr10:71,816,298...71,851,251
Ensembl chr10:71,816,298...71,851,251
JBrowse link
cornification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP14 caspase 14 involved_in TAS (PMID:18309324) UniProt
UniProt
PMID:18309324 NCBI chr19:15,049,480...15,058,293
Ensembl chr19:15,049,480...15,058,293
JBrowse link
G CERS3 ceramide synthase 3 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:100,400,395...100,544,683
Ensembl chr15:100,400,395...100,544,995
JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5466369|PMID:22366455) MGI
Ensembl
Ensembl
PMID:22366455 GO_REF:0000107 MGI:5466369 NCBI chr 2:72,129,238...72,147,862
Ensembl chr 2:72,129,238...72,147,862
JBrowse link
G KLK5 kallikrein related peptidase 5 involved_in TAS Reactome
Reactome
Reactome:R-HSA-6809371 NCBI chr19:50,943,303...50,953,038
Ensembl chr19:50,943,303...50,953,093
JBrowse link
G KRT5 keratin 5 involved_in IEA UniProt GO_REF:0000117 NCBI chr12:52,514,575...52,520,394
Ensembl chr12:52,514,575...52,520,530
JBrowse link
G KRT74 keratin 74 involved_in IEA UniProt GO_REF:0000117 NCBI chr12:52,565,782...52,573,843
Ensembl chr12:52,565,782...52,573,843
JBrowse link
G KRT8 keratin 8 involved_in IEA UniProt GO_REF:0000117 NCBI chr12:52,897,191...52,949,860
Ensembl chr12:52,897,187...52,949,954
JBrowse link
G KRT81 keratin 81 involved_in IEA UniProt GO_REF:0000117 NCBI chr12:52,285,913...52,308,624
Ensembl chr12:52,285,913...52,291,534
JBrowse link
G LIPK lipase family member K involved_in TAS Reactome
Reactome
Reactome:R-HSA-6809371 NCBI chr10:88,706,249...88,752,776
Ensembl chr10:88,706,249...88,752,776
JBrowse link
G LIPM lipase family member M involved_in TAS Reactome
Reactome
Reactome:R-HSA-6809371 NCBI chr10:88,802,730...88,820,546
Ensembl chr10:88,802,730...88,820,546
JBrowse link
G LIPN lipase family member N involved_in TAS Reactome
Reactome
Reactome:R-HSA-6809371 NCBI chr10:88,757,226...88,779,626
Ensembl chr10:88,759,982...88,779,626
JBrowse link
G TMEM79 transmembrane protein 79 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5519142|PMID:24084074) MGI
Ensembl
Ensembl
PMID:24084074 GO_REF:0000107 MGI:5519142 NCBI chr 1:156,282,932...156,292,443
Ensembl chr 1:156,282,935...156,293,185
JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr15:42,738,730...42,921,000
Ensembl chr15:42,738,730...42,920,809
JBrowse link
cumulus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPPC natriuretic peptide C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:231,921,809...231,926,396
Ensembl chr 2:231,921,809...231,926,396
JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:35,791,591...35,809,731
Ensembl chr 9:35,791,003...35,809,732
JBrowse link
de novo centriole assembly involved in multi-ciliated epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC78 coiled-coil domain containing 78 involved_in IDA (PMID:24075808) UniProt
UniProt
PMID:24075808 NCBI chr16:722,582...726,880
Ensembl chr16:722,582...726,954
JBrowse link
G CEP152 centrosomal protein 152 involved_in ISS
IEA
UniProt
Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr15:48,729,083...48,811,069
Ensembl chr15:48,712,928...48,811,146
JBrowse link
G CEP63 centrosomal protein 63 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 3:134,485,724...134,782,559
Ensembl chr 3:134,485,699...134,587,789
JBrowse link
G DEUP1 deuterosome assembly protein 1 involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
Ensembl
GO_Central
UniProt
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr11:93,329,998...93,438,470
Ensembl chr11:93,329,971...93,438,487
JBrowse link
G PLK4 polo like kinase 4 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:127,880,893...127,899,224
Ensembl chr 4:127,880,893...127,899,224
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSH cathepsin H involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:78,921,058...78,945,046
Ensembl chr15:78,921,058...78,949,574
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3703920|PMID:17369357) MGI
Ensembl
Ensembl
PMID:17369357 GO_REF:0000107 MGI:3703920 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:4422106 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
dichotomous subdivision of terminal units involved in salivary gland branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRP1 neuropilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3720502|PMID:17626059) Ensembl
Ensembl
MGI
PMID:17626059 GO_REF:0000107 MGI:3720502 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262
JBrowse link
G PLXNA1 plexin A1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3720502|PMID:17626059) MGI
Ensembl
Ensembl
PMID:17626059 GO_REF:0000107 MGI:3720502 NCBI chr 3:126,983,115...127,037,389
Ensembl chr 3:126,982,693...127,037,389
JBrowse link
G PLXND1 plexin D1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3720502|PMID:17626059) MGI
Ensembl
Ensembl
PMID:17626059 GO_REF:0000107 MGI:3720502 NCBI chr 3:129,555,214...129,606,676
Ensembl chr 3:129,555,214...129,606,676
JBrowse link
G SEMA3A semaphorin 3A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3720502|PMID:17626059) MGI
Ensembl
PMID:17626059 GO_REF:0000107 MGI:3720502 NCBI chr 7:83,955,777...84,492,725
Ensembl chr 7:83,955,777...84,492,724
JBrowse link
G SEMA3C semaphorin 3C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3720502|PMID:17626059) MGI
Ensembl
Ensembl
PMID:17626059 GO_REF:0000107 MGI:3720502 NCBI chr 7:80,742,538...80,922,389
Ensembl chr 7:80,742,538...80,922,359
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777
JBrowse link
distal tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:50,818,355...50,847,619
Ensembl chr 6:50,818,723...50,847,619
JBrowse link
distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLHL3 kelch like family member 3 involved_in IMP (PMID:22406640), (PMID:23453970), (PMID:23576762) UniProt
UniProt
PMID:22406640 PMID:23453970 PMID:23576762 NCBI chr 5:137,617,500...137,736,089
Ensembl chr 5:137,617,500...137,736,089
JBrowse link
G WNK4 WNK lysine deficient protein kinase 4 involved_in IMP (PMID:23453970), (PMID:23576762) UniProt
UniProt
PMID:23453970 PMID:23576762 NCBI chr17:42,780,610...42,797,066
Ensembl chr17:42,780,610...42,797,066
JBrowse link
dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046395|PMID:15218525) MGI
Ensembl
Ensembl
PMID:15218525 GO_REF:0000107 MGI:3046395 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3774974|PMID:18003640)
(MGI:3806189|PMID:18590716)
Ensembl
Ensembl
MGI
PMID:18003640 PMID:18590716 GO_REF:0000107 MGI:3774974 MGI:3806189 NCBI chr19:18,531,763...18,543,573
Ensembl chr19:18,531,751...18,544,077
JBrowse link
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5486225|PMID:23383217) Ensembl
Ensembl
MGI
PMID:23383217 GO_REF:0000107 MGI:5486225 NCBI chr14:37,589,552...37,595,249
Ensembl chr14:37,589,552...37,596,059
JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:5486225|PMID:23383217)
(MGI:894511|PMID:9226455)
(MGI:3806189|PMID:18590716)
MGI PMID:9226455 PMID:18590716 PMID:23383217 MGI:3806189 MGI:5486225 MGI:894511 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,580,998...22,585,455
JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:3710451|PMID:17504941)
(MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940)
MGI PMID:17504940 PMID:17504941 MGI:3710451 MGI:3710452 NCBI chr 9:86,944,362...86,947,506
Ensembl chr 9:86,944,362...86,947,506
JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:894564|PMID:9247260)
(MGI:3806189|PMID:18590716), (MGI:3841503|PMID:19286674)
MGI
Ensembl
PMID:9247260 PMID:18590716 PMID:19286674 GO_REF:0000107 MGI:3806189 MGI:3841503 MGI:894564 NCBI chr 2:120,735,868...120,992,653
Ensembl chr 2:120,735,623...120,992,653
JBrowse link
G GSC goosecoid homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:894511|PMID:9226455) Ensembl
Ensembl
MGI
PMID:9226455 GO_REF:0000107 MGI:894511 NCBI chr14:94,768,223...94,770,113
Ensembl chr14:94,768,223...94,770,113
JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within
involved_in
ISO (MGI:3806189|PMID:18590716)
(MGI:3806189|PMID:18590716), (MGI:3841503|PMID:19286674)
(MGI:4888042|PMID:21209331)
MGI
BHF-UCL
PMID:18590716 PMID:19286674 PMID:21209331 MGI:3806189 MGI:3841503 MGI:4888042 NCBI chr 5:132,688,812...132,737,546
Ensembl chr 5:132,692,628...132,737,638
JBrowse link
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (MGI:3806189|PMID:18590716) MGI PMID:18590716 MGI:3806189 NCBI chr 7:157,004,854...157,010,663
Ensembl chr 7:156,994,051...157,010,663
JBrowse link
G PAX7 paired box 7 acts_upstream_of_or_within ISO (MGI:3806189|PMID:18590716) MGI PMID:18590716 MGI:3806189 NCBI chr 1:18,630,846...18,748,866
Ensembl chr 1:18,630,846...18,748,866
JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1347695|PMID:10557208) MGI
Ensembl
Ensembl
PMID:10557208 GO_REF:0000107 MGI:1347695 NCBI chr14:73,136,417...73,223,691
Ensembl chr14:73,136,418...73,223,691
JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (MGI:1347695|PMID:10557208) MGI PMID:10557208 MGI:1347695 NCBI chr 1:226,870,616...226,903,668
Ensembl chr 1:226,870,184...226,927,726
JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1095757|PMID:9262482) MGI
Ensembl
PMID:9262482 GO_REF:0000107 MGI:1095757 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G RAB23 RAB23, member RAS oncogene family involved_in ISO (MGI:69552|PMID:7720556) UniProt PMID:7720556 MGI:69552 NCBI chr 6:57,186,992...57,222,307
Ensembl chr 6:57,186,992...57,222,307
JBrowse link
G RNF220 ring finger protein 220 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6220747|PMID:30177510) MGI
Ensembl
Ensembl
PMID:30177510 GO_REF:0000107 MGI:6220747 NCBI chr 1:44,404,783...44,651,724
Ensembl chr 1:44,405,194...44,651,724
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3710017|PMID:17442700), (MGI:3806189|PMID:18590716)
(MGI:3710451|PMID:17504941)
MGI
Ensembl
Ensembl
PMID:17442700 PMID:17504941 PMID:18590716 GO_REF:0000107 MGI:3710017 MGI:3710451 MGI:3806189 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3806189|PMID:18590716) MGI
Ensembl
Ensembl
PMID:18590716 GO_REF:0000107 MGI:3806189 NCBI chr 7:129,188,633...129,213,545
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
G TCTN1 tectonic family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610767|PMID:16357211) MGI
Ensembl
Ensembl
PMID:16357211 GO_REF:0000107 MGI:3610767 NCBI chr12:110,614,129...110,649,430
Ensembl chr12:110,614,027...110,663,431
JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3841503|PMID:19286674) MGI
Ensembl
PMID:19286674 GO_REF:0000107 MGI:3841503 NCBI chr12:2,890,891...2,941,138
Ensembl chr12:2,877,223...2,941,138
JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:64780|PMID:8299937) MGI
Ensembl
Ensembl
PMID:8299937 GO_REF:0000107 MGI:64780 NCBI chr 1:228,006,998...228,061,271
Ensembl chr 1:228,006,998...228,061,271
JBrowse link
embryonic epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RET ret proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513229|PMID:15569713) MGI
Ensembl
Ensembl
PMID:15569713 GO_REF:0000107 MGI:3513229 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513229|PMID:15569713) MGI
Ensembl
Ensembl
PMID:15569713 GO_REF:0000107 MGI:3513229 NCBI chr22:50,672,823...50,733,212
Ensembl chr22:50,674,415...50,733,212
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624584|PMID:16546160) MGI
Ensembl
Ensembl
PMID:16546160 GO_REF:0000107 MGI:3624584 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
embryonic heart tube development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APELA apelin receptor early endogenous ligand involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 4:164,877,178...164,899,007
Ensembl chr 4:164,877,178...164,898,965
JBrowse link
G CDC42 cell division cycle 42 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360
JBrowse link
G CHRD chordin involved_in ISO (MGI:3721005|PMID:17685487) MGI PMID:17685487 MGI:3721005 NCBI chr 3:184,380,054...184,390,739
Ensembl chr 3:184,380,054...184,390,736
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3773938|PMID:18231602) Ensembl
Ensembl
MGI
PMID:18231602 GO_REF:0000107 MGI:3773938 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:21,217,250...21,345,504
Ensembl chr 1:21,217,247...21,345,572
JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:12,256,484...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:3629000|PMID:16720879)
GO_Central
MGI
Ensembl
GO_Central
PMID:16720879 PMID:21873635 GO_REF:0000107 MGI:3629000 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3701373|PMID:16678147) MGI
Ensembl
Ensembl
PMID:16678147 GO_REF:0000107 MGI:3701373 NCBI chr 6:1,609,915...1,613,897
Ensembl chr 6:1,609,915...1,613,897
JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3701373|PMID:16678147) MGI
Ensembl
Ensembl
PMID:16678147 GO_REF:0000107 MGI:3701373 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728
JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (MGI:87488|PMID:9136932)
(MGI:87489|PMID:9136933)
MGI PMID:9136932 PMID:9136933 MGI:87488 MGI:87489 NCBI chr 8:11,676,935...11,760,002
Ensembl chr 8:11,676,959...11,760,002
JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:2686766|PMID:14732399) MGI PMID:14732399 MGI:2686766 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G GJA5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (MGI:5304955|PMID:22203979)
(MGI:2686766|PMID:14732399)
MGI PMID:14732399 PMID:22203979 MGI:2686766 MGI:5304955 NCBI chr 1:147,756,199...147,773,351
Ensembl chr 1:147,756,199...147,773,362
JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:1197800|PMID:9500551) MGI
BHF-UCL
Ensembl
BHF-UCL
PMID:9500551 GO_REF:0000024 GO_REF:0000107 MGI:1197800 NCBI chr 5:154,474,972...154,478,227
Ensembl chr 5:154,474,972...154,478,227
JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:3487182|PMID:15459110) MGI PMID:15459110 MGI:3487182 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:129,440,224...129,520,507
Ensembl chr 3:129,429,607...129,520,510
JBrowse link
G MED1 mediator complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2682174|PMID:14500757) MGI
Ensembl
Ensembl
PMID:14500757 GO_REF:0000107 MGI:2682174 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (MGI:6304148|PMID:30735130) MGI PMID:30735130 MGI:6304148 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257
JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chr 2:182,909,115...183,038,457
Ensembl chr 2:182,909,115...183,038,858
JBrowse link
G NDRG4 NDRG family member 4 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr16:58,463,715...58,515,387
Ensembl chr16:58,462,846...58,513,628
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:8900537)
(MGI:3578574|PMID:15843414)
BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:8900537 PMID:15843414 GO_REF:0000107 MGI:3578574 NCBI chr 5:173,232,109...173,235,206
Ensembl chr 5:173,232,109...173,235,311
JBrowse link
G NKX2-6 NK2 homeobox 6 involved_in ISS
IEA
IMP
(PMID:15649947) BHF-UCL
BHF-UCL
Ensembl
HGNC-UCL
HGNC-UCL
PMID:15649947 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:23,701,740...23,706,756
Ensembl chr 8:23,701,740...23,706,756
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2155575|PMID:11311163) MGI
Ensembl
PMID:11311163 GO_REF:0000107 MGI:2155575 NCBI chr10:70,431,936...70,447,951
Ensembl chr10:70,431,936...70,447,951
JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (MGI:5696764|PMID:25220058) MGI PMID:25220058 MGI:5696764 NCBI chr21:46,324,156...46,445,769
Ensembl chr21:46,324,124...46,445,769
JBrowse link
G PLXNA4 plexin A4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:132,123,340...132,648,688
Ensembl chr 7:132,123,340...132,648,688
JBrowse link
G SLC8A1 solute carrier family 8 member A1 acts_upstream_of_or_within ISO (MGI:4867054|PMID:21302256) MGI PMID:21302256 MGI:4867054 NCBI chr 2:40,097,270...40,512,435
Ensembl chr 2:40,097,270...40,611,053
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3716256|PMID:17610846) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:17610846 GO_REF:0000024 GO_REF:0000107 MGI:3716256 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892
JBrowse link
G SOX18 SRY-box transcription factor 18 acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:3716256|PMID:17610846) MGI
BHF-UCL
Ensembl
BHF-UCL
PMID:17610846 GO_REF:0000024 GO_REF:0000107 MGI:3716256 NCBI chr20:64,047,582...64,049,639
Ensembl chr20:64,047,582...64,049,639
JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
G TBX20 T-box transcription factor 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578574|PMID:15843414) MGI
Ensembl
PMID:15843414 GO_REF:0000107 MGI:3578574 NCBI chr 7:35,202,430...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532232|PMID:23844108) MGI
Ensembl
PMID:23844108 GO_REF:0000107 MGI:5532232 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
G TMEM94 transmembrane protein 94 acts_upstream_of_or_within ISO (MGI:6272053|PMID:30526868) MGI PMID:30526868 MGI:6272053 NCBI chr17:75,456,635...75,500,452
Ensembl chr17:75,441,159...75,500,452
JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chr 2:238,320,518...238,400,900
Ensembl chr 2:238,320,441...238,400,897
JBrowse link
embryonic heart tube elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX20 T-box transcription factor 20 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:35,202,430...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAND1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1927045|PMID:11076684) MGI
Ensembl
Ensembl
PMID:11076684 GO_REF:0000107 MGI:1927045 NCBI chr 5:154,474,972...154,478,227
Ensembl chr 5:154,474,972...154,478,227
JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:4888042 NCBI chr 3:129,440,224...129,520,507
Ensembl chr 3:129,429,607...129,520,510
JBrowse link
G INVS inversin acts_upstream_of_or_within ISO (MGI:892786|PMID:9192865) MGI PMID:9192865 MGI:892786 NCBI chr 9:100,099,243...100,302,175
Ensembl chr 9:100,099,243...100,302,175
JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISS
IEA
UniProt
CAFA
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:42,325,635...42,378,765
Ensembl chr19:42,325,609...42,378,769
JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:892786|PMID:9192865) MGI
Ensembl
Ensembl
PMID:9192865 GO_REF:0000107 MGI:892786 NCBI chr 5:173,232,109...173,235,206
Ensembl chr 5:173,232,109...173,235,311
JBrowse link
G PIFO primary cilia formation acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4819432|PMID:20643351) MGI
Ensembl
Ensembl
PMID:20643351 GO_REF:0000107 MGI:4819432 NCBI chr 1:111,324,663...111,353,017
Ensembl chr 1:111,346,600...111,353,013
JBrowse link
G PITX2 paired like homeodomain 2 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
embryonic heart tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IMP (PMID:19506109) BHF-UCL
BHF-UCL
PMID:19506109 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISS
IEA
UniProt
Ensembl
CAFA
GO_REF:0000024 GO_REF:0000107 NCBI chr19:42,325,635...42,378,765
Ensembl chr19:42,325,609...42,378,769
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA
ISS
Ensembl
BHF-UCL
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249
JBrowse link
G RYR2 ryanodine receptor 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:237,042,184...237,833,988
Ensembl chr 1:237,042,184...237,833,988
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892
JBrowse link
G TBX20 T-box transcription factor 20 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:35,202,430...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
G TEAD1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (MGI:3773640|PMID:18332127) MGI PMID:18332127 MGI:3773640 NCBI chr11:12,674,421...12,944,737
Ensembl chr11:12,674,421...12,944,737
JBrowse link
G TEAD2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3773640|PMID:18332127) Ensembl
Ensembl
MGI
PMID:18332127 GO_REF:0000107 MGI:3773640 NCBI chr19:49,340,595...49,362,416
Ensembl chr19:49,340,595...49,362,457
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3773640|PMID:18332127) Ensembl
Ensembl
MGI
PMID:18332127 GO_REF:0000107 MGI:3773640 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424
JBrowse link
endocardial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOTCH1 notch receptor 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G NRG1 neuregulin 1 involved_in IDA (PMID:17336907) BHF-UCL
BHF-UCL
PMID:17336907 NCBI chr 8:31,639,245...32,774,046
Ensembl chr 8:31,639,222...32,855,666
JBrowse link
G SMAD4 SMAD family member 4 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
G SOX17 SRY-box transcription factor 17 acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:3716256|PMID:17610846) MGI
BHF-UCL
Ensembl
BHF-UCL
PMID:17610846 GO_REF:0000024 GO_REF:0000107 MGI:3716256 NCBI chr 8:54,457,935...54,460,892
Ensembl chr 8:54,457,935...54,460,892
JBrowse link
G SOX18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3716256|PMID:17610846) BHF-UCL
BHF-UCL
Ensembl
MGI
PMID:17610846 GO_REF:0000024 GO_REF:0000107 MGI:3716256 NCBI chr20:64,047,582...64,049,639
Ensembl chr20:64,047,582...64,049,639
JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IMP (PMID:19506109) BHF-UCL
BHF-UCL
PMID:19506109 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
endothelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCM2 CCM2 scaffold protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3837878|PMID:19151727) MGI
Ensembl
Ensembl
PMID:19151727 GO_REF:0000107 MGI:3837878 NCBI chr 7:44,999,746...45,076,470
Ensembl chr 7:44,999,475...45,076,469
JBrowse link
G GPX1 glutathione peroxidase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3698597|PMID:16373599) MGI
Ensembl
Ensembl
PMID:16373599 GO_REF:0000107 MGI:3698597 NCBI chr 3:49,357,176...49,358,353
Ensembl chr 3:49,357,174...49,358,605
JBrowse link
G HEG1 heart development protein with EGF like domains 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3837878|PMID:19151727) MGI
Ensembl
PMID:19151727 GO_REF:0000107 MGI:3837878 NCBI chr 3:124,965,710...125,055,997
Ensembl chr 3:124,965,710...125,055,997
JBrowse link
G VEZF1 vascular endothelial zinc finger 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3581991|PMID:15882861) Ensembl
Ensembl
MGI
PMID:15882861 GO_REF:0000107 MGI:3581991 NCBI chr17:57,971,552...57,988,254
Ensembl chr17:57,971,547...57,988,259
JBrowse link
endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARX1 BARX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3577819|PMID:15809042) Ensembl
MGI
PMID:15809042 GO_REF:0000107 MGI:3577819 NCBI chr 9:93,951,627...93,955,355
Ensembl chr 9:93,951,627...93,955,355
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:24955809 GO_REF:0000107 RGD:11352686 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,119,177
JBrowse link
G EDF1 endothelial differentiation related factor 1 involved_in TAS (PMID:12040021) UniProt
UniProt
PMID:12040021 NCBI chr 9:136,862,119...136,866,308
Ensembl chr 9:136,862,119...136,866,308
JBrowse link
G FSTL1 follistatin like 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:120,392,293...120,450,992
Ensembl chr 3:120,392,293...120,450,993
JBrowse link
G FZD1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3577819|PMID:15809042) Ensembl
MGI
PMID:15809042 GO_REF:0000107 MGI:3577819 NCBI chr 7:91,264,433...91,271,326
Ensembl chr 7:91,264,433...91,271,326
JBrowse link
G FZD2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3577819|PMID:15809042) Ensembl
MGI
PMID:15809042 GO_REF:0000107 MGI:3577819 NCBI chr17:44,557,484...44,561,262
Ensembl chr17:44,557,484...44,561,262
JBrowse link
G FZD4 frizzled class receptor 4 acts_upstream_of_or_within ISO (MGI:5468198|PMID:23217714) MGI PMID:23217714 MGI:5468198 NCBI chr11:86,945,679...86,955,395
Ensembl chr11:86,945,679...86,955,395
JBrowse link
G HOXB5 homeobox B5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2670246|PMID:12897140) MGI
Ensembl
Ensembl
PMID:12897140 GO_REF:0000107 MGI:2670246 NCBI chr17:48,591,257...48,593,779
Ensembl chr17:48,591,257...48,593,779
JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in NAS (PMID:10329626) UniProt
UniProt
PMID:10329626 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999
JBrowse link
G KDM6B lysine demethylase 6B involved_in ISS
IEA
(PMID:23856522) BHF-UCL
BHF-UCL
Ensembl
PMID:23856522 GO_REF:0000107 NCBI chr17:7,834,217...7,854,796
Ensembl chr17:7,834,217...7,854,796
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:5543371|PMID:18772315)
(PMID:21873635)
(MGI:2670246|PMID:12897140)
MGI
GO_Central
Ensembl
GO_Central
PMID:12897140 PMID:18772315 PMID:21873635 GO_REF:0000107 MGI:2670246 MGI:5543371 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IMP (PMID:18297060) BHF-UCL
BHF-UCL
PMID:18297060 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249
JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (MGI:5468198|PMID:23217714) MGI PMID:23217714 MGI:5468198 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395
JBrowse link
G NOTCH4 notch receptor 4 involved_in ISO
IEA
RGD
Ensembl
PMID:10964583 GO_REF:0000107 RGD:1304484 NCBI chr 6:32,194,843...32,224,067
Ensembl chr 6:32,194,843...32,224,067
JBrowse link
G PTN pleiotrophin ISO RGD PMID:20830586 RGD:9686141 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774
JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:7959012 GO_REF:0000107 RGD:61573 NCBI chr 1:101,236,899...101,242,313
Ensembl chr 1:101,236,865...101,243,713
JBrowse link
G SCUBE1 signal peptide, CUB domain and EGF like domain containing 1 involved_in NAS (PMID:12270931) UniProt
UniProt
PMID:12270931 NCBI chr22:43,197,280...43,343,372
Ensembl chr22:43,197,280...43,343,372
JBrowse link
G SETSIP SET like protein involved_in IDA (PMID:22869753) UniProt
UniProt
PMID:22869753 NCBI chr 1:92,074,533...92,075,411
Ensembl chr 1:92,074,533...92,075,411
JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of ISO (MGI:5618205|PMID:25186293) MGI PMID:25186293 MGI:5618205 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,667
JBrowse link
endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA13 homeobox A13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3797428|PMID:18483557) MGI
Ensembl
Ensembl
PMID:18483557 GO_REF:0000107 MGI:3797428 NCBI chr 7:27,194,364...27,200,091
Ensembl chr 7:27,193,503...27,200,091
JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF26 Rho guanine nucleotide exchange factor 26 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486234|PMID:23372835) MGI
Ensembl
Ensembl
PMID:23372835 GO_REF:0000107 MGI:5486234 NCBI chr 3:154,121,003...154,257,825
Ensembl chr 3:154,121,003...154,257,827
JBrowse link
G CLIC4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3837628|PMID:19197003) Ensembl
Ensembl
MGI
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 1:24,745,447...24,844,321
Ensembl chr 1:24,745,382...24,844,321
JBrowse link
G CNMD chondromodulin acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:2656472|PMID:12714610)
(PMID:21873635)
MGI
GO_Central
PMID:12714610 PMID:21873635 MGI:2656472 NCBI chr13:52,703,264...52,739,820
Ensembl chr13:52,703,264...52,739,820
JBrowse link
G COL15A1 collagen type XV alpha 1 chain involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:98,911,204...99,070,787
Ensembl chr 9:98,943,179...99,070,792
JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3046127|PMID:15188432)
(PMID:21873635)
MGI
GO_Central
GO_Central
PMID:15188432 PMID:21873635 MGI:3046127 NCBI chr21:45,405,165...45,513,720
Ensembl chr21:45,405,165...45,513,720
JBrowse link
G COL22A1 collagen type XXII alpha 1 chain involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:138,588,235...138,914,041
Ensembl chr 8:138,588,235...138,914,041
JBrowse link
G HEG1 heart development protein with EGF like domains 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3837878|PMID:19151727) MGI
Ensembl
Ensembl
PMID:19151727 GO_REF:0000107 MGI:3837878 NCBI chr 3:124,965,710...125,055,997
Ensembl chr 3:124,965,710...125,055,997
JBrowse link
G HOXA13 homeobox A13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3797428|PMID:18483557) MGI
Ensembl
Ensembl
PMID:18483557 GO_REF:0000107 MGI:3797428 NCBI chr 7:27,194,364...27,200,091
Ensembl chr 7:27,193,503...27,200,091
JBrowse link
G ID1 inhibitor of DNA binding 1 acts_upstream_of_or_within ISO (MGI:3759000|PMID:17717145) MGI PMID:17717145 MGI:3759000 NCBI chr20:31,605,289...31,606,510
Ensembl chr20:31,605,283...31,606,515
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:4940123|PMID:21285373) MGI PMID:21285373 MGI:4940123 NCBI chr13:20,567,157...20,691,444
Ensembl chr13:20,567,138...20,691,444
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IDA (PMID:14500721) UniProt
UniProt
PMID:14500721 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G NOTCH4 notch receptor 4 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:10964583 GO_REF:0000107 RGD:1304484 NCBI chr 6:32,194,843...32,224,067
Ensembl chr 6:32,194,843...32,224,067
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:3723364|PMID:17563397) MGI PMID:17563397 MGI:3723364 NCBI chr17:64,319,415...64,390,860
Ensembl chr17:64,319,415...64,413,776
JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618677|PMID:16467571) MGI
Ensembl
Ensembl
PMID:16467571 GO_REF:0000107 MGI:3618677 NCBI chr 7:101,205,984...101,217,581
Ensembl chr 7:101,205,977...101,218,420
JBrowse link
G STC1 stanniocalcin 1 involved_in IDA (PMID:14500721) UniProt
UniProt
PMID:14500721 NCBI chr 8:23,841,929...23,854,806
Ensembl chr 8:23,841,929...23,854,806
JBrowse link
G TNMD tenomodulin acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:2656472|PMID:12714610)
(PMID:21873635)
MGI
Ensembl
GO_Central
PMID:12714610 PMID:21873635 GO_REF:0000107 MGI:2656472 NCBI chr  X:100,584,936...100,599,885
Ensembl chr  X:100,584,936...100,599,885
JBrowse link
endothelial tip cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:170,282,206...170,291,078
Ensembl chr 6:170,282,206...170,306,565
JBrowse link
G NRP1 neuropilin 1 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262
JBrowse link
endothelial tube lumen extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHOA ras homolog family member A acts_upstream_of_or_within IGI (PMID:20208559) MGI
MGI
PMID:20208559 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998
JBrowse link
G STARD13 StAR related lipid transfer domain containing 13 acts_upstream_of_or_within IGI
IMP
(PMID:20208559) MGI
MGI
PMID:20208559 NCBI chr13:33,103,137...33,676,794
Ensembl chr13:33,103,137...33,350,630
JBrowse link
endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IMP (PMID:19592636) BHF-UCL
BHF-UCL
PMID:19592636 NCBI chr12:51,906,944...51,923,361
Ensembl chr12:51,906,908...51,923,361
JBrowse link
G BSG basigin (Ok blood group) involved_in IDA (PMID:19837976) UniProt
UniProt
PMID:19837976 NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,494
JBrowse link
G CCM2 CCM2 scaffold protein acts_upstream_of_or_within IMP (PMID:19151727) MGI
MGI
PMID:19151727 NCBI chr 7:44,999,746...45,076,470
Ensembl chr 7:44,999,475...45,076,469
JBrowse link
G CSNK2B casein kinase 2 beta involved_in IMP (PMID:19592636) BHF-UCL
BHF-UCL
PMID:19592636 NCBI chr 6:31,666,080...31,670,067
Ensembl chr 6:31,665,227...31,670,343
JBrowse link
G CTNNB1 catenin beta 1 involved_in IMP (PMID:20123964) BHF-UCL
BHF-UCL
PMID:20123964 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:24955809 GO_REF:0000107 RGD:11352686 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,119,177
JBrowse link
G KDR kinase insert domain receptor ISO RGD PMID:25942475 RGD:126925211 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G MIR21 microRNA 21 involved_in IMP (PMID:21347332) BHF-UCL PMID:21347332 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337
JBrowse link
G PRKD2 protein kinase D2 involved_in TAS (PMID:21488147) BHF-UCL
BHF-UCL
PMID:21488147 NCBI chr19:46,674,316...46,717,114
Ensembl chr19:46,674,275...46,717,127
JBrowse link
G RHOB ras homolog family member B involved_in IMP (PMID:21347332) BHF-UCL
BHF-UCL
PMID:21347332 NCBI chr 2:20,447,074...20,449,440
Ensembl chr 2:20,447,074...20,449,440
JBrowse link
endothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCM2 CCM2 scaffold protein involved_in NAS (PMID:17657516) ComplexPortal PMID:17657516 NCBI chr 7:44,999,746...45,076,470
Ensembl chr 7:44,999,475...45,076,469
JBrowse link
G CD34 CD34 molecule involved_in IEP (PMID:17261663) UniProt
UniProt
PMID:17261663 NCBI chr 1:207,880,972...207,911,125
Ensembl chr 1:207,880,972...207,911,402
JBrowse link
G GJA1 gap junction protein alpha 1 ISO RGD PMID:10990491 RGD:7207853 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G GJA4 gap junction protein alpha 4 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:10990491 GO_REF:0000107 RGD:7207853 NCBI chr 1:34,792,999...34,795,747
Ensembl chr 1:34,792,999...34,795,747
JBrowse link
G GJA5 gap junction protein alpha 5 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:10990491 GO_REF:0000107 RGD:7207853 NCBI chr 1:147,756,199...147,773,351
Ensembl chr 1:147,756,199...147,773,362
JBrowse link
G KDR kinase insert domain receptor involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G KRIT1 KRIT1 ankyrin repeat containing involved_in NAS (PMID:17657516) ComplexPortal PMID:17657516 NCBI chr 7:92,198,969...92,246,100
Ensembl chr 7:92,197,498...92,246,166
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (MGI:4950812|PMID:21408219) MGI PMID:21408219 MGI:4950812 NCBI chr17:42,536,241...42,544,449
Ensembl chr17:42,536,241...42,544,449
JBrowse link
G PDCD10 programmed cell death 10 involved_in NAS (PMID:17657516) ComplexPortal PMID:17657516 NCBI chr 3:167,683,298...167,734,892
Ensembl chr 3:167,683,298...167,734,939
JBrowse link
G SLC40A1 solute carrier family 40 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578034|PMID:15342464) MGI
Ensembl
Ensembl
PMID:15342464 GO_REF:0000107 MGI:3578034 NCBI chr 2:189,560,590...189,580,786
Ensembl chr 2:189,560,590...189,583,758
JBrowse link
enterocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of
IEA
ISO
(MGI:3818355|PMID:17980593) Ensembl
MGI
PMID:17980593 GO_REF:0000107 MGI:3818355 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424
JBrowse link
enteroendocrine cell differentiation term browser
Symbol Object Name