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ONTOLOGY REPORT - ANNOTATIONS

Term:cardiac septum morphogenesis
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Accession:GO:0060411 term browser browse the term
Definition:The process in which the anatomical structure of a cardiac septum is generated and organized. A cardiac septum is a partition that separates parts of the heart.
Synonyms:exact_synonym: heart septum morphogenesis
 alt_id: GO:0003280


show annotations for term's descendants           Sort by:
cardiac septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in ISO
IEA		 UniProtKB:P23359 (PMID:10079236)
GO_REF:0000107		 RGD
Ensembl		 PMID:10079236 GO_REF:0000107 NCBI chr 8:85,397,629...85,520,374
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO
IEA		 UniProtKB:P49003 (PMID:10079236)
GO_REF:0000107		 RGD
Ensembl		 PMID:10079236 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO
IEA		 MGI:2450311|MGI:4433295 (PMID:26102480)
GO_REF:0000107		 RGD
Ensembl		 PMID:26102480 GO_REF:0000107 NCBI chr 5:26,609,245...26,792,736
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2179740 (PMID:11694877) RGD PMID:11694877 NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within ISO
IEA		 MGI:5007106 (PMID:24005908)
GO_REF:0000107		 RGD
Ensembl		 PMID:24005908 GO_REF:0000107 NCBI chr 5:162,031,853...162,065,655
Ensembl chr 5:156,747,962...156,782,417 		JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within ISO MGI:4821828 (PMID:27340223) RGD PMID:27340223 NCBI chr 6:144,982,130...145,298,523
Ensembl chr 6:138,839,177...139,155,536 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO
IEA		 (PMID:19586923)
GO_REF:0000107		 RGD
Ensembl		 PMID:19586923 GO_REF:0000107 NCBI chr10:42,507,117...42,509,684
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:17259303) RGD PMID:17259303 NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO
IEA		 (PMID:17259303)
GO_REF:0000107		 RGD
Ensembl		 PMID:17259303 GO_REF:0000107 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:3823090 (PMID:19036983) RGD PMID:19036983 NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19509466)		 Ensembl
RGD		 PMID:19509466 GO_REF:0000107 NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Mdm2 MDM2 proto-oncogene acts_upstream_of_or_within ISO
IEA		 MGI:107934|MGI:98834 (PMID:22821713)
GO_REF:0000107		 RGD
Ensembl		 PMID:22821713 GO_REF:0000107 NCBI chr 7:55,176,558...55,201,757
Ensembl chr 7:53,290,664...53,314,915 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within ISO
IEA		 MGI:4821832 (PMID:27340223)
GO_REF:0000107		 RGD
Ensembl		 PMID:27340223 GO_REF:0000107 NCBI chr10:73,152,599...73,167,451
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO
IEA		 (PMID:16510504)
GO_REF:0000107		 RGD
Ensembl		 PMID:16510504 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO
IEA		 (PMID:20007915)
GO_REF:0000107		 RGD
Ensembl		 PMID:20007915 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO
IEA		 MGI:107934|MGI:96952 (PMID:22821713)
GO_REF:0000107		 RGD
Ensembl		 PMID:22821713 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
atrial septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO
IEA		 (PMID:19409885)
GO_REF:0000107		 RGD
Ensembl		 PMID:19409885 GO_REF:0000107 NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO MGI:2446577 (PMID:17023674) RGD PMID:17023674 NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:234,562,408...234,565,484 		JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO
IEA		 MGI:2179530 (PMID:10521397)
GO_REF:0000107		 RGD
Ensembl		 PMID:10521397 GO_REF:0000107 NCBI chr 9:44,234,997...44,247,846
Ensembl chr 9:36,739,071...36,751,930 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO
IEA		 (PMID:12845333)
GO_REF:0000107		 RGD
Ensembl		 PMID:12845333 GO_REF:0000107 NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO
IEA		 MGI:2445238 (PMID:10969038)
GO_REF:0000107		 RGD
Ensembl		 PMID:10969038 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO
IEA		 (PMID:12372254)
GO_REF:0000107		 RGD
Ensembl		 PMID:12372254 GO_REF:0000107 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q02248 (PMID:17519333)		 Ensembl
RGD		 PMID:17519333 GO_REF:0000107 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO
IEA		 (PMID:10587520), (PMID:9651244)
GO_REF:0000107		 RGD
Ensembl		 PMID:9651244 PMID:10587520 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16773578)		 Ensembl
RGD		 PMID:16773578 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO
IEA		 MGI:102541 (PMID:22898775)
GO_REF:0000107		 RGD
Ensembl		 PMID:22898775 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO
IEA		 (PMID:17668378), (PMID:18834961), (PMID:19762328)
GO_REF:0000107		 RGD
Ensembl		 PMID:17668378 PMID:18834961 PMID:19762328 GO_REF:0000107 NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Tbx5 T-box transcription factor 5 acts_upstream_of_or_within ISO
IEA		 MGI:108075 (PMID:22898775)
GO_REF:0000107		 RGD
Ensembl		 PMID:22898775 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA		 (PMID:9217007)
GO_REF:0000107		 RGD
Ensembl		 PMID:9217007 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in ISO
IEA		 (PMID:14614148)
GO_REF:0000107		 RGD
Ensembl		 PMID:14614148 GO_REF:0000107 NCBI chr19:67,242,922...67,299,149
Ensembl chr19:50,334,682...50,390,591 		JBrowse link
atrial septum primum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA		 (PMID:19506109)
GO_REF:0000107
(PMID:16140292)		 RGD
Ensembl		 PMID:16140292 PMID:19506109 GO_REF:0000107 NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (PMID:17643447) RGD PMID:17643447 NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:3851507 (PMID:19483677)
GO_REF:0000107		 RGD
Ensembl		 PMID:19483677 GO_REF:0000107 NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:16109771) RGD PMID:16109771 NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA		 (PMID:11390347)
GO_REF:0000107		 RGD
Ensembl		 PMID:11390347 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
atrial septum secundum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 involved_in ISO
IEA		 (PMID:20347099)
GO_REF:0000107		 RGD
Ensembl		 PMID:20347099 GO_REF:0000107 NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:3851507 (PMID:19483677)
GO_REF:0000107		 RGD
Ensembl		 PMID:19483677 GO_REF:0000107 NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641 		JBrowse link
foramen ovale closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO
IEA		 MGI:2445238 (PMID:10969038)
GO_REF:0000107		 RGD
Ensembl		 PMID:10969038 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO
IEA		 (PMID:19762328)
GO_REF:0000107		 RGD
Ensembl		 PMID:19762328 GO_REF:0000107 NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
membranous septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15070745), (PMID:18924235)		 Ensembl
RGD		 PMID:15070745 PMID:18924235 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153818 (PMID:16687131) RGD PMID:16687131 NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within ISO MGI:1888513|MGI:2135272 (PMID:20940229) RGD PMID:20940229 NCBI chr 4:30,265,074...30,269,472
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within ISO
IEA		 MGI:1196625|MGI:2135272 (PMID:20940229)
GO_REF:0000107		 RGD
Ensembl		 PMID:20940229 GO_REF:0000107 NCBI chr10:88,061,988...88,063,898
Ensembl chr10:87,561,326...87,565,334 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (PMID:21330551) RGD PMID:21330551 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:17218603)		 Ensembl
RGD		 PMID:17218603 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:3851507 (PMID:19483677)
GO_REF:0000107		 RGD
Ensembl		 PMID:19483677 GO_REF:0000107 NCBI chr14:81,057,727...81,135,866
Ensembl chr14:76,835,637...76,913,641 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA		 (PMID:11390347)
GO_REF:0000107		 RGD
Ensembl		 PMID:11390347 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA		 (PMID:20652948)
GO_REF:0000107		 RGD
Ensembl		 PMID:20652948 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:1196625|MGI:1888513 (PMID:20940229)
GO_REF:0000107		 RGD
Ensembl		 PMID:20940229 GO_REF:0000107 NCBI chr13:86,995,124...87,021,770
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
muscular septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 NOT|involved_in ISO (PMID:18924235) RGD PMID:18924235 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within ISO MGI:1888513|MGI:2135272 (PMID:20940229) RGD PMID:20940229 NCBI chr 4:30,265,074...30,269,472
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within ISO
IEA		 MGI:1196625|MGI:2135272 (PMID:20940229)
GO_REF:0000107		 RGD
Ensembl		 PMID:20940229 GO_REF:0000107 NCBI chr10:88,061,988...88,063,898
Ensembl chr10:87,561,326...87,565,334 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO
IEA		 (PMID:12372254)
GO_REF:0000107		 RGD
Ensembl		 PMID:12372254 GO_REF:0000107 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:12773577) RGD PMID:12773577 NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO
IEA		 MGI:1196625|MGI:1888513 (PMID:20940229)
GO_REF:0000107		 RGD
Ensembl		 PMID:20940229 GO_REF:0000107 NCBI chr13:86,995,124...87,021,770
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
outflow tract septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 NOT|involved_in ISO (PMID:16140292) RGD PMID:16140292 NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15070745), (PMID:18924235)		 Ensembl
RGD		 PMID:15070745 PMID:18924235 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO
IEA		 (PMID:15073157)
GO_REF:0000107		 RGD
Ensembl		 PMID:15073157 GO_REF:0000107 NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 NOT|involved_in ISO (PMID:19409885)
(PMID:12441304)		 RGD PMID:12441304 PMID:19409885 NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within ISO MGI:3831892 (PMID:19008950) RGD PMID:19008950 NCBI chr11:93,869,834...93,887,013
Ensembl chr11:80,366,117...80,382,462 		JBrowse link
G Eng endoglin involved_in ISO UniProtKB:P97471 (PMID:17628518) RGD PMID:17628518 NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO
IEA		 UniProtKB:P70323 (PMID:20807544)
GO_REF:0000107		 RGD
Ensembl		 PMID:20807544 GO_REF:0000107 NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153818 (PMID:16687131) RGD PMID:16687131 NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Gata6 GATA binding protein 6 involved_in ISO (PMID:19666519) RGD PMID:19666519 NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q02248 (PMID:17519333)		 Ensembl
RGD		 PMID:17519333 GO_REF:0000107 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:26822476)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26822476 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:74,597,148...74,754,535
Ensembl chr 3:54,189,308...54,346,708 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO
IEA		 MGI:97168 (PMID:17601530)
GO_REF:0000107		 RGD
Ensembl		 PMID:17601530 GO_REF:0000107 NCBI chr17:11,102,284...11,107,949
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20807224)		 Ensembl
RGD		 PMID:20807224 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nrp1 neuropilin 1 involved_in ISO
IEA		 (PMID:26053665)
GO_REF:0000107		 RGD
Ensembl		 PMID:26053665 GO_REF:0000107 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633 		JBrowse link
G Nrp2 neuropilin 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q62181 (PMID:26053665)		 Ensembl
RGD		 PMID:26053665 GO_REF:0000107 NCBI chr 9:71,616,602...71,731,869
Ensembl chr 9:64,123,132...64,237,958 		JBrowse link
G Parva parvin, alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:19798050)		 UniProt
RGD		 PMID:19798050 GO_REF:0000024 NCBI chr 1:175,981,725...176,139,523
Ensembl chr 1:166,547,132...166,704,950 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:84,379,780...84,424,371
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:10,837,252...11,482,037
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (PMID:25691540) RGD PMID:25691540 NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO UniProtKB:O89026 (PMID:25691540) RGD PMID:25691540 NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536 		JBrowse link
G Sema3c semaphorin 3C involved_in ISO
IEA		 UniProtKB:O35375|UniProtKB:P97333 (PMID:26053665)
GO_REF:0000107		 RGD
Ensembl		 PMID:26053665 GO_REF:0000107 NCBI chr 4:18,538,452...18,702,453
Ensembl chr 4:17,583,212...17,746,534 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q63961 (PMID:17628518)		 Ensembl
RGD		 PMID:17628518 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Smad6 SMAD family member 6 involved_in ISO
IEA		 (PMID:10655064)
GO_REF:0000107		 RGD
Ensembl		 PMID:10655064 GO_REF:0000107 NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20807544)		 UniProt
RGD		 PMID:20807544 GO_REF:0000024 NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO
IEA		 (PMID:15459098)
GO_REF:0000107		 RGD
Ensembl		 PMID:15459098 GO_REF:0000107 NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO
IEA		 (PMID:18275040), (PMID:18834961)
GO_REF:0000107
(PMID:15843409)		 RGD
Ensembl		 PMID:15843409 PMID:18275040 PMID:18834961 GO_REF:0000107 NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA		 (PMID:11390347), (PMID:9217007)
GO_REF:0000107		 RGD
Ensembl		 PMID:9217007 PMID:11390347 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA		 (PMID:20652948)
GO_REF:0000107		 RGD
Ensembl		 PMID:20652948 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in ISO
IEA		 (PMID:20807224)
GO_REF:0000107		 RGD
Ensembl		 PMID:20807224 GO_REF:0000107 NCBI chr 7:73,563,732...74,001,041
Ensembl chr 7:71,678,880...72,116,205 		JBrowse link
ventricular septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA		 (PMID:16140292)
GO_REF:0000107		 RGD
Ensembl		 PMID:16140292 GO_REF:0000107 NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 involved_in ISO (PMID:32323311) RGD PMID:32323311 NCBI chr18:54,545,357...54,729,184
Ensembl chr18:52,347,428...52,530,509 		JBrowse link
G Aplnr apelin receptor involved_in ISO
IEA		 (PMID:23603510)
GO_REF:0000107		 RGD
Ensembl		 PMID:23603510 GO_REF:0000107 NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO
IEA		 (PMID:11854453)
GO_REF:0000107		 RGD
Ensembl		 PMID:11854453 GO_REF:0000107 NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO
IEA		 (PMID:12441304), (PMID:19409885)
GO_REF:0000107		 RGD
Ensembl		 PMID:12441304 PMID:19409885 GO_REF:0000107 NCBI chr 9:68,685,942...68,801,353
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (PMID:15475956) RGD PMID:15475956 NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 acts_upstream_of_or_within ISO MGI:3690045 (PMID:16966370) RGD PMID:16966370 NCBI chr19:69,765,276...69,804,681
Ensembl chr19:52,869,486...52,907,777 		JBrowse link
G Fgfrl1 fibroblast growth factor receptor-like 1 acts_upstream_of_or_within ISO
IEA		 MGI:3849002 (PMID:19383940)
GO_REF:0000107		 RGD
Ensembl		 PMID:19383940 GO_REF:0000107 NCBI chr14:1,154,275...1,166,334
Ensembl chr14:1,009,786...1,021,928 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within ISO MGI:1888513 (PMID:20940229) RGD PMID:20940229 NCBI chr 4:30,265,074...30,269,472
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within ISO
IEA		 MGI:1196625 (PMID:20940229)
GO_REF:0000107		 RGD
Ensembl		 PMID:20940229 GO_REF:0000107 NCBI chr10:88,061,988...88,063,898
Ensembl chr10:87,561,326...87,565,334 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO
IEA		 MGI:2445238 (PMID:10969038)
GO_REF:0000107		 RGD
Ensembl		 PMID:10969038 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19609448)		 Ensembl
RGD		 PMID:19609448 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO UniProtKB:Q9DBX7 (PMID:17303760) RGD PMID:17303760 NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO
IEA		 (PMID:12372254)
GO_REF:0000107		 RGD
Ensembl		 PMID:12372254 GO_REF:0000107 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like involved_in ISO
IEA		 UniProtKB:Q9WV93 (PMID:17303760)
GO_REF:0000107		 RGD
Ensembl		 PMID:17303760 GO_REF:0000107 NCBI chr 5:140,793,271...140,810,262
Ensembl chr 5:135,508,160...135,525,152 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of ISO MGI:98958 (PMID:19056682) RGD PMID:19056682 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,587,848...98,587,931
Ensembl chr15:92,180,629...92,180,712 		JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993 		JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,433...98,588,519
Ensembl chr15:92,181,214...92,181,300 		JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO MGI:2676844|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,303...98,588,387
Ensembl chr15:92,181,084...92,181,168 		JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (PMID:9515964) RGD PMID:9515964 NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10587520), (PMID:20807224)		 Ensembl
RGD		 PMID:10587520 PMID:20807224 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nog noggin involved_in ISO
IEA		 (PMID:17218603)
GO_REF:0000107		 RGD
Ensembl		 PMID:17218603 GO_REF:0000107 NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q01705 (PMID:27107132)		 Ensembl
RGD		 PMID:27107132 GO_REF:0000107 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO
IEA		 (PMID:16025100)
GO_REF:0000107
UniProtKB:P70313 (PMID:26491108), (PMID:27107132)		 RGD
Ensembl		 PMID:16025100 PMID:26491108 PMID:27107132 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857844|MGI:2386742 (PMID:18292603) RGD PMID:18292603 NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA		 (PMID:19091769)
GO_REF:0000107		 RGD
Ensembl		 PMID:19091769 GO_REF:0000107 NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Rbm15 RNA binding motif protein 15 acts_upstream_of_or_within ISO
IEA		 MGI:2656539|MGI:3706994 (PMID:18981216)
GO_REF:0000107		 RGD
Ensembl		 PMID:18981216 GO_REF:0000107 NCBI chr 2:197,634,174...197,642,697
Ensembl chr 2:194,945,974...194,954,703 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (PMID:26491108) RGD PMID:26491108 NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (PMID:25691540) RGD PMID:25691540 NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO UniProtKB:O89026 (PMID:25691540) RGD PMID:25691540 NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536 		JBrowse link
G Sav1 salvador family WW domain containing protein 1 acts_upstream_of_or_within ISO
IEA		 MGI:2654594|MGI:4430538 (PMID:21512031)
GO_REF:0000107		 RGD
Ensembl		 PMID:21512031 GO_REF:0000107 NCBI chr 6:94,214,514...94,236,354
Ensembl chr 6:88,478,539...88,499,968 		JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:25691540) RGD PMID:25691540 NCBI chr14:66,829,661...67,168,517
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
G Slit3 slit guidance ligand 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25691540)		 Ensembl
RGD		 PMID:25691540 GO_REF:0000107 NCBI chr10:20,075,929...20,660,704
Ensembl chr10:19,571,684...20,156,634 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16151019)		 Ensembl
RGD		 PMID:16151019 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18952608)		 Ensembl
RGD		 PMID:18952608 GO_REF:0000107 NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15254231)		 UniProt
Ensembl
RGD		 PMID:15254231 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:49,736,773...49,738,794
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:16109771) RGD PMID:16109771 NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:3710254 (PMID:18467625)
GO_REF:0000107		 RGD
Ensembl		 PMID:18467625 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA		 (PMID:9217007)
GO_REF:0000107		 RGD
Ensembl		 PMID:9217007 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18718461)		 Ensembl
RGD		 PMID:18718461 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA		 (PMID:17050629)
GO_REF:0000107		 RGD
Ensembl		 PMID:17050629 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:17704211) RGD PMID:17704211 NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO
IEA		 MGI:2665014 (PMID:17767158)
GO_REF:0000107		 RGD
Ensembl		 PMID:17767158 GO_REF:0000107 NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in ISO
IEA		 (PMID:14614148)
GO_REF:0000107		 RGD
Ensembl		 PMID:14614148 GO_REF:0000107 NCBI chr19:67,242,922...67,299,149
Ensembl chr19:50,334,682...50,390,591 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in ISO
IEA		 (PMID:20807224)
GO_REF:0000107		 RGD
Ensembl		 PMID:20807224 GO_REF:0000107 NCBI chr 7:73,563,732...74,001,041
Ensembl chr 7:71,678,880...72,116,205 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      anatomical structure morphogenesis 3018
        cardiac septum morphogenesis 87
          atrial septum morphogenesis + 17
          endocardial cushion to mesenchymal transition involved in heart chamber septation 0
          foramen ovale closure 2
          outflow tract septum morphogenesis 29
          ventricular septum morphogenesis + 53
Path 2
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          system development 4644
            circulatory system development 1387
              heart development 750
                cardiac chamber development 204
                  cardiac septum development 132
                    cardiac septum morphogenesis 87
                      atrial septum morphogenesis + 17
                      endocardial cushion to mesenchymal transition involved in heart chamber septation 0
                      foramen ovale closure 2
                      outflow tract septum morphogenesis 29
                      ventricular septum morphogenesis + 53
paths to the root