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ONTOLOGY REPORT - ANNOTATIONS


Term:calcium ion transport into cytosol
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Accession:GO:0060402 term browser browse the term
Definition:The directed movement of calcium ions (Ca2+) into the cytosol.


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calcium ion transport into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A involved_in ISO PMID:19011682 BHF-UCL PMID:19011682 RGD:5688340 NCBI chrNW_004955403:49,394,173...49,485,881
Ensembl chrNW_004955403:49,399,127...49,485,934
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G ISO RGD PMID:18760992 RGD:7175320 NCBI chrNW_004955451:11,136,885...11,194,321
Ensembl chrNW_004955451:11,137,214...11,194,036
JBrowse link
G Cacna1i calcium voltage-gated channel subunit alpha1 I ISO RGD PMID:18760992 RGD:7175320 NCBI chrNW_004955413:25,440,533...25,538,367
Ensembl chrNW_004955413:25,453,703...25,535,530
JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 involved_in ISO PMID:25527503 BHF-UCL PMID:25527503 RGD:11059598 NCBI chrNW_004955410:3,544,398...3,963,582
Ensembl chrNW_004955410:3,619,740...3,964,239
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 involved_in ISO PMID:25527503 BHF-UCL PMID:25527503 RGD:11059598 NCBI chrNW_004955500:7,676,331...7,685,174
Ensembl chrNW_004955500:7,672,828...7,687,420
JBrowse link
G Itpr3 inositol 1,4,5-trisphosphate receptor type 3 involved_in ISO (MGI:4849347|PMID:21030605) UniProt PMID:21030605 MGI:4849347 NCBI chrNW_004955437:2,055,782...2,106,709
Ensembl chrNW_004955437:2,055,805...2,106,076
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17921453) BHF-UCL PMID:17921453 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in ISO (MGI:1927695|PMID:10967099) RGD
BHF-UCL
PMID:9486131 PMID:10967099 MGI:1927695 RGD:2316984 NCBI chrNW_004955441:7,653,107...8,037,784
Ensembl chrNW_004955441:7,656,031...7,957,640
JBrowse link
G Slc8a2 solute carrier family 8 member A2 ISO RGD PMID:9486131 RGD:2316984 NCBI chrNW_004955574:1,290,907...1,315,399
Ensembl chrNW_004955574:1,288,952...1,315,401
JBrowse link
G Slc8a3 solute carrier family 8 member A3 ISO RGD PMID:9486131 RGD:2316984 NCBI chrNW_004955466:220,346...359,627
Ensembl chrNW_004955466:220,099...360,851
JBrowse link
G Trpm1 transient receptor potential cation channel subfamily M member 1 involved_in ISO (PMID:23452348) UniProt PMID:23452348 NCBI chrNW_004955416:29,846,374...29,880,922
Ensembl chrNW_004955416:29,814,077...29,939,344
JBrowse link
calcium export from the mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Letm1 leucine zipper and EF-hand containing transmembrane protein 1 involved_in ISO (PMID:19797662)
(MGI:5897526|PMID:27669901)
UniProt PMID:19797662 PMID:27669901 MGI:5897526 NCBI chrNW_004955514:1,040,103...1,069,297
Ensembl chrNW_004955514:1,042,307...1,069,114
JBrowse link
G Slc8b1 solute carrier family 8 member B1 involved_in ISO (PMID:24898248)
(MGI:5902676|PMID:24067497), (MGI:5902863|PMID:28445457)
UniProt PMID:24067497 PMID:24898248 PMID:28445457 MGI:5902676 MGI:5902863 NCBI chrNW_004955482:9,594,872...9,617,136
Ensembl chrNW_004955482:9,595,604...9,605,271
JBrowse link
calcium ion import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:6402838 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506
JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:18294734 RGD:9835370 NCBI chrNW_004955405:18,434,711...18,540,710
Ensembl chrNW_004955405:18,434,711...18,540,710
JBrowse link
G Slc24a2 solute carrier family 24 member 2 involved_in ISO (PMID:10662833) ARUK-UCL PMID:10662833 NCBI chrNW_004955434:21,871,319...22,091,125
Ensembl chrNW_004955434:21,873,091...22,091,177
JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (MGI:6718234|PMID:27093457) ARUK-UCL PMID:27093457 MGI:6718234 NCBI chrNW_004955438:14,609,779...14,765,516
Ensembl chrNW_004955438:14,609,424...14,759,673
JBrowse link
G Slc8a2 solute carrier family 8 member A2 ISO RGD PMID:17343909 RGD:7241257 NCBI chrNW_004955574:1,290,907...1,315,399
Ensembl chrNW_004955574:1,288,952...1,315,401
JBrowse link
G Slc8a3 solute carrier family 8 member A3 ISO RGD PMID:17343909 RGD:7241257 NCBI chrNW_004955466:220,346...359,627
Ensembl chrNW_004955466:220,099...360,851
JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 involved_in ISO (MGI:5298324|PMID:21753080) RGD
UniProt
PMID:16651700 PMID:21753080 MGI:5298324 RGD:9999433 NCBI chrNW_004955407:41,062,217...41,110,500
Ensembl chrNW_004955407:41,057,941...41,110,668
JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 involved_in ISO (PMID:11226139) UniProt PMID:11226139 RGD:11535102 NCBI chrNW_004955467:13,221,391...13,239,089
Ensembl chrNW_004955467:13,221,391...13,239,089
JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in ISO (PMID:19790068), (PMID:25681460) AgBase PMID:19790068 PMID:25681460 NCBI chrNW_004955455:8,744,865...8,781,644
Ensembl chrNW_004955455:8,744,176...8,783,741
JBrowse link
G Trpv6 transient receptor potential cation channel subfamily V member 6 involved_in ISO (PMID:29861107)
(MGI:5466472|PMID:22878123)
PMID:10428857
(PMID:11097838)
UniProt PMID:10428857 PMID:11097838 PMID:22878123 PMID:29861107 MGI:5466472 RGD:68825 NCBI chrNW_004955494:820,801...835,931
Ensembl chrNW_004955494:818,643...836,126
JBrowse link
calcium ion import into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ms4a1 membrane spanning 4-domains A1 involved_in ISO (PMID:7684739)
(MGI:3037466|PMID:14688067)
UniProt PMID:7684739 PMID:14688067 MGI:3037466 NCBI chrNW_004955511:5,252,934...5,263,961
Ensembl chrNW_004955511:5,258,341...5,267,113
JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in ISO (PMID:29899501) UniProt PMID:29899501 NCBI chrNW_004955455:8,744,865...8,781,644
Ensembl chrNW_004955455:8,744,176...8,783,741
JBrowse link
calcium ion transmembrane import into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO (PMID:26875626) UniProt PMID:26875626 NCBI chrNW_004955513:5,154,864...5,178,636
Ensembl chrNW_004955513:5,154,864...5,178,636
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in ISO (PMID:27839871)
(PMID:26875626)
UniProt PMID:26875626 PMID:27839871 NCBI chrNW_004955442:8,171,114...8,565,187
Ensembl chrNW_004955442:8,174,232...8,562,059
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO (PMID:26875626)
(PMID:27839871)
UniProt PMID:26875626 PMID:27839871 NCBI chrNW_004955413:10,358,931...10,780,004
Ensembl chrNW_004955413:10,376,597...10,779,145
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in ISO (PMID:26875626) UniProt PMID:26875626 NCBI chrNW_004955553:1,729,431...1,746,754
Ensembl chrNW_004955553:1,729,860...1,737,751
JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D involved_in ISO (PMID:26875626) UniProt PMID:26875626 NCBI chrNW_004955559:2,042,723...2,080,706 JBrowse link
G Trpa1 transient receptor potential cation channel subfamily A member 1 ISO RGD PMID:14712238 PMID:31969645 RGD:127285811 RGD:1303969 NCBI chrNW_004955444:7,876,284...7,922,010
Ensembl chrNW_004955444:7,876,429...7,921,372
JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 involved_in ISO (PMID:19171771), (PMID:27068538) UniProt PMID:19171771 PMID:27068538 NCBI chrNW_004955407:41,062,217...41,110,500
Ensembl chrNW_004955407:41,057,941...41,110,668
JBrowse link
negative regulation of calcium ion transport into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:3527292|PMID:15613488) MGI PMID:15613488 MGI:3527292 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Epo erythropoietin involved_in ISO (PMID:14569084) BHF-UCL PMID:14569084 NCBI chrNW_004955573:203,875...206,078
Ensembl chrNW_004955573:203,441...206,355
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 acts_upstream_of_or_within ISO (PMID:26582200) MGI PMID:26582200 NCBI chrNW_004955547:335,344...358,503
Ensembl chrNW_004955547:335,275...358,503
JBrowse link
negative regulation of release of sequestered calcium ion into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcrl5 Fc receptor like 5 acts_upstream_of_or_within ISO (MGI:5471851|PMID:23509253) MGI PMID:23509253 MGI:5471851 NCBI chrNW_004955468:9,434,654...9,464,907
Ensembl chrNW_004955468:9,435,804...9,465,024
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A NOT|involved_in ISO (PMID:12443530) BHF-UCL PMID:12443530 NCBI chrNW_004955596:580,106...606,210
Ensembl chrNW_004955596:580,106...603,255
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in ISO (PMID:12443530) BHF-UCL PMID:12443530 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:12084713 RGD:727385 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
G Prkce protein kinase C epsilon involved_in ISO PMID:20383739 UniProt PMID:20383739 RGD:7206836 NCBI chrNW_004955441:12,642,703...13,142,396
Ensembl chrNW_004955441:12,642,697...13,139,372
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:12876066 RGD:731229 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO RGD PMID:12876066 RGD:731229 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Trdn triadin ISO RGD PMID:16176928 RGD:7327230 NCBI chrNW_004955436:4,963,945...5,266,727 JBrowse link
negative regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calm1 calmodulin 1 involved_in ISO (PMID:26164367) UniProt PMID:26164367 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028
JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:26164367) UniProt PMID:26164367 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:26164367) UniProt PMID:26164367 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924
JBrowse link
G Casq2 calsequestrin 2 involved_in ISO (PMID:15041652)
PMID:17569730
(PMID:16601229)
BHF-UCL PMID:15041652 PMID:16601229 PMID:17569730 RGD:2314601 NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
JBrowse link
G Clic2 chloride intracellular channel 2 involved_in ISO (PMID:15147738), (PMID:15916532) BHF-UCL PMID:15147738 PMID:15916532 NCBI chrNW_004955594:374,332...393,802
Ensembl chrNW_004955594:374,208...393,389
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A NOT|involved_in ISO (PMID:12443530) BHF-UCL PMID:12443530 NCBI chrNW_004955596:580,106...606,210
Ensembl chrNW_004955596:580,106...603,255
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in ISO (PMID:12443530) BHF-UCL PMID:12443530 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within ISO (MGI:3708075|PMID:17404231) MGI PMID:17404231 MGI:3708075 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
G Sri sorcin involved_in ISO (PMID:17699613) BHF-UCL PMID:17699613 NCBI chrNW_004955432:5,541,311...5,559,781
Ensembl chrNW_004955432:5,541,311...5,560,294
JBrowse link
positive regulation of calcium ion import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:11408541 RGD:1598759 NCBI chrNW_004955431:19,025,663...19,027,026 JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:11408541 RGD:1598759 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:15569855 RGD:1579758 NCBI chrNW_004955474:8,733,942...8,781,305
Ensembl chrNW_004955474:8,733,942...8,781,255
JBrowse link
G Calcr calcitonin receptor involved_in ISO (PMID:22500019) ARUK-UCL PMID:22500019 NCBI chrNW_004955432:10,310,776...10,391,029
Ensembl chrNW_004955432:10,309,263...10,391,141
JBrowse link
G Iapp islet amyloid polypeptide involved_in ISO (PMID:22500019) ARUK-UCL PMID:22500019 NCBI chrNW_004955413:16,834,940...16,841,071
Ensembl chrNW_004955413:16,835,037...16,840,682
JBrowse link
G P2rx1 purinergic receptor P2X 1 ISO RGD PMID:12237343 RGD:727431 NCBI chrNW_004955467:12,955,663...12,971,547
Ensembl chrNW_004955467:12,955,672...12,971,547
JBrowse link
G P2rx5 purinergic receptor P2X 5 ISO RGD PMID:12237343 RGD:727431 NCBI chrNW_004955467:13,125,710...13,140,031 JBrowse link
G Ramp3 receptor activity modifying protein 3 involved_in ISO (PMID:22500019) ARUK-UCL PMID:22500019 NCBI chrNW_004955456:7,159,845...7,168,718
Ensembl chrNW_004955456:7,159,845...7,168,792
JBrowse link
positive regulation of calcium ion transport into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:16401644 RGD:2315978 NCBI chrNW_004955410:32,176,683...32,229,187
Ensembl chrNW_004955410:32,176,536...32,229,431
JBrowse link
G Akap5 A-kinase anchoring protein 5 ISO RGD PMID:18381233 RGD:2313201 NCBI chrNW_004955466:5,411,190...5,422,043
Ensembl chrNW_004955466:5,411,650...5,412,960
JBrowse link
G Asph aspartate beta-hydroxylase involved_in ISO (PMID:21062895) UniProt PMID:21062895 NCBI chrNW_004955444:17,116,060...17,320,966
Ensembl chrNW_004955444:17,121,559...17,318,295
JBrowse link
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (MGI:3527292|PMID:15613488) MGI PMID:15613488 MGI:3527292 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3527292|PMID:15613488) MGI PMID:15613488 MGI:3527292 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO RGD PMID:20844246 RGD:8801954 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Cav1 caveolin 1 involved_in ISO (MGI:3837270|PMID:19052258) BHF-UCL PMID:19052258 MGI:3837270 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Cd4 CD4 molecule ISO RGD PMID:8959663 RGD:10058973 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535
JBrowse link
G Ffar1 free fatty acid receptor 1 ISO RGD PMID:15914509 RGD:2315052 NCBI chrNW_004955468:4,626,567...4,627,683
Ensembl chrNW_004955468:4,626,748...4,627,650
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO PMID:17308309 ARUK-UCL PMID:17308309 RGD:12910994 NCBI chrNW_004955513:5,154,864...5,178,636
Ensembl chrNW_004955513:5,154,864...5,178,636
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor ISO RGD PMID:8187959 RGD:2292619 NCBI chrNW_004955441:15,205,883...15,263,617 JBrowse link
G Oga O-GlcNAcase ISO RGD PMID:16107505 RGD:2305960 NCBI chrNW_004955485:8,477,615...8,509,386
Ensembl chrNW_004955485:8,478,060...8,507,420
JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in ISO (PMID:10969036)
(PMID:10899068)
BHF-UCL PMID:10899068 PMID:10969036 NCBI chrNW_004955482:7,031,874...7,039,026
Ensembl chrNW_004955482:7,031,874...7,039,220
JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in ISO (PMID:9038151) BHF-UCL PMID:9038151 NCBI chrNW_004955482:7,048,674...7,087,525
Ensembl chrNW_004955482:7,048,776...7,086,926
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:15528384) BHF-UCL PMID:15528384 NCBI chrNW_004955455:11,308,848...11,316,245
Ensembl chrNW_004955455:11,308,643...11,316,254
JBrowse link
G Trpc3 transient receptor potential cation channel subfamily C member 3 involved_in ISO (PMID:21062895) UniProt PMID:21062895 NCBI chrNW_004955428:18,628,951...18,678,525
Ensembl chrNW_004955428:18,628,890...18,678,906
JBrowse link
positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin involved_in ISO (PMID:12873381) UniProt PMID:12873381 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO PMID:17410128 ARUK-UCL PMID:17410128 RGD:13673830 NCBI chrNW_004955414:18,177,406...18,215,428
Ensembl chrNW_004955414:18,177,406...18,215,428
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:16223735) BHF-UCL PMID:16223735 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
positive regulation of release of sequestered calcium ion into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:3839222|PMID:19228876) MGI PMID:19228876 MGI:3839222 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239
JBrowse link
G Akap6 A-kinase anchoring protein 6 involved_in ISO PMID:12709444 BHF-UCL PMID:12709444 RGD:8554839 NCBI chrNW_004955409:28,067,814...28,516,881
Ensembl chrNW_004955409:28,077,621...28,516,944
JBrowse link
G Aplnr apelin receptor involved_in ISO (PMID:25639753) UniProt PMID:25639753 NCBI chrNW_004955511:2,321,445...2,324,417
Ensembl chrNW_004955511:2,322,920...2,324,068
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3694443|PMID:15947791) MGI PMID:15947791 MGI:3694443 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bdkrb1 bradykinin receptor B1 NOT ISO in nociceptive dorsal root ganglion neurons
in urinary bladder urothelium
RGD PMID:15319421 PMID:15576455 RGD:1625040 RGD:1625754 NCBI chrNW_004955438:16,500,219...16,505,394
Ensembl chrNW_004955438:16,500,633...16,501,691
JBrowse link
G Capn3 calpain 3 involved_in ISO (MGI:3811664|PMID:18676612) UniProt PMID:18676612 MGI:3811664 NCBI chrNW_004955416:9,070,479...9,121,099
Ensembl chrNW_004955416:9,070,399...9,117,794
JBrowse link
G Casq1 calsequestrin 1 involved_in ISO (PMID:28895244) UniProt PMID:28895244 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
JBrowse link
G Cd19 CD19 molecule involved_in
acts_upstream_of_or_within
ISO (PMID:16672701)
(MGI:3839222|PMID:19228876)
(MGI:1100180|PMID:9382888)
(PMID:9382888)
UniProt
MGI
PMID:9382888 PMID:16672701 PMID:19228876 MGI:1100180 MGI:3839222 NCBI chrNW_004955493:6,540,160...6,544,077 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 involved_in ISO (PMID:23990668) UniProt PMID:23990668 NCBI chrNW_004955416:11,562,047...11,699,925
Ensembl chrNW_004955416:11,613,316...11,699,925
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO (PMID:10415068), (PMID:10869418) ARUK-UCL PMID:10415068 PMID:10869418 NCBI chrNW_004955433:15,023,272...15,034,650
Ensembl chrNW_004955433:15,023,050...15,034,711
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in ISO (PMID:12782716) UniProt PMID:12782716 NCBI chrNW_004955433:748,392...750,890
Ensembl chrNW_004955433:748,284...750,927
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 involved_in ISO (PMID:12782716) UniProt PMID:12782716 NCBI chrNW_004955433:769,449...771,137
Ensembl chrNW_004955433:766,272...771,231
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in ISO (PMID:12782716) UniProt PMID:12782716 NCBI chrNW_004955433:724,566...731,945
Ensembl chrNW_004955433:724,515...732,192
JBrowse link
G Cxcr3 C-X-C motif chemokine receptor 3 involved_in ISO (PMID:12782716) UniProt PMID:12782716 NCBI chrNW_004955475:11,148,928...11,152,313
Ensembl chrNW_004955475:11,148,879...11,152,596
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:9804683 RGD:2316286 NCBI chrNW_004955459:10,342,528...10,347,700
Ensembl chrNW_004955459:10,342,251...10,347,733
JBrowse link
G Drd1 dopamine receptor D1 involved_in ISO (PMID:1282671), (PMID:7838121) BHF-UCL PMID:1282671 PMID:7838121 NCBI chrNW_004955408:28,003,229...28,006,595
Ensembl chrNW_004955408:28,003,229...28,006,595
JBrowse link
G Ednra endothelin receptor type A ISO RGD PMID:12628492 RGD:728499 NCBI chrNW_004955428:3,062,303...3,114,761
Ensembl chrNW_004955428:3,062,303...3,114,761
JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:1672265), (PMID:19052258) BHF-UCL PMID:1672265 PMID:19052258 NCBI chrNW_004955422:1,356,675...1,367,788
Ensembl chrNW_004955422:1,356,769...1,367,517
JBrowse link
G F2r coagulation factor II thrombin receptor involved_in ISO (PMID:1672265) BHF-UCL PMID:1672265 NCBI chrNW_004955425:24,144,905...24,164,498 JBrowse link
G F2rl3 F2R like thrombin or trypsin receptor 3 involved_in ISO (PMID:18480058) BHF-UCL PMID:18480058 NCBI chrNW_004955524:1,045,493...1,047,924
Ensembl chrNW_004955524:1,044,792...1,047,819
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:15705806) UniProt PMID:15705806 NCBI chrNW_004955460:8,790,798...8,794,902
Ensembl chrNW_004955460:8,790,798...8,794,902
JBrowse link
G Gpr39 G protein-coupled receptor 39 acts_upstream_of_or_within ISO (MGI:5707553|PMID:26375174)
(MGI:5464224|PMID:23133519)
MGI PMID:23133519 PMID:26375174 MGI:5464224 MGI:5707553 NCBI chrNW_004955440:46,648...235,644
Ensembl chrNW_004955440:47,652...239,206
JBrowse link
G Il13 interleukin 13 ISO RGD PMID:20045483 RGD:4145470 NCBI chrNW_004955408:4,046,406...4,049,795 JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor ISO RGD PMID:8187959 RGD:2292619 NCBI chrNW_004955441:15,205,883...15,263,617 JBrowse link
G Npsr1 neuropeptide S receptor 1 involved_in ISO (PMID:16790440) UniProt PMID:16790440 NCBI chrNW_004955560:1,069,651...1,243,111
Ensembl chrNW_004955560:1,069,651...1,243,111
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:10799761 RGD:9743926 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in ISO (PMID:22454520) BHF-UCL PMID:22454520 NCBI chrNW_004955442:14,685,089...14,772,870
Ensembl chrNW_004955442:14,685,153...14,772,870
JBrowse link
G Plcg1 phospholipase C gamma 1 involved_in ISO (PMID:22454520) BHF-UCL PMID:22454520 NCBI chrNW_004955445:15,787,496...15,823,859
Ensembl chrNW_004955445:15,787,496...15,823,859
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:15641770) UniProt PMID:15641770 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
G Sri sorcin involved_in ISO (MGI:5487506|PMID:22338092) BHF-UCL PMID:22338092 MGI:5487506 NCBI chrNW_004955432:5,541,311...5,559,781
Ensembl chrNW_004955432:5,541,311...5,560,294
JBrowse link
G Tex101 testis expressed 101 ISO RGD PMID:11809740 RGD:634491 NCBI chrNW_004955555:1,136,499...1,140,802
Ensembl chrNW_004955555:1,138,100...1,140,882
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO PMID:2873512 UniProt PMID:2873512 RGD:8554039 NCBI chrNW_004955412:20,480,284...20,484,958
Ensembl chrNW_004955412:20,480,284...20,484,958
JBrowse link
G Trdn triadin ISO RGD PMID:21811790 RGD:7327228 NCBI chrNW_004955436:4,963,945...5,266,727 JBrowse link
G Trpc1 transient receptor potential cation channel subfamily C member 1 involved_in ISO (PMID:19052258) BHF-UCL PMID:19052258 NCBI chrNW_004955508:3,143,868...3,211,613
Ensembl chrNW_004955508:3,143,868...3,211,613
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:7602097) BHF-UCL PMID:7602097 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
positive regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap6 A-kinase anchoring protein 6 involved_in ISO PMID:12709444 BHF-UCL PMID:12709444 RGD:8554839 NCBI chrNW_004955409:28,067,814...28,516,881
Ensembl chrNW_004955409:28,077,621...28,516,944
JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028
JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924
JBrowse link
G Jph2 junctophilin 2 involved_in ISO (PMID:20095964) UniProt PMID:20095964 NCBI chrNW_004955445:13,117,312...13,190,061
Ensembl chrNW_004955445:13,118,717...13,187,235
JBrowse link
G Trdn triadin involved_in ISO (PMID:15041652), (PMID:15731460) BHF-UCL PMID:15041652 PMID:15731460 NCBI chrNW_004955436:4,963,945...5,266,727 JBrowse link
regulation of calcium ion import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:5447900|PMID:22820466) ARUK-UCL PMID:22820466 MGI:5447900 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054
JBrowse link
G Prnp prion protein involved_in ISO (MGI:5447900|PMID:22820466) ARUK-UCL PMID:22820466 MGI:5447900 NCBI chrNW_004955415:15,442,313...15,454,644
Ensembl chrNW_004955415:15,442,313...15,454,644
JBrowse link
regulation of calcium ion transport into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pml PML nuclear body scaffold involved_in ISO (MGI:4849347|PMID:21030605) UniProt PMID:21030605 MGI:4849347 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17178715)
(MGI:5427070|PMID:21859974), (MGI:5430893|PMID:17178715)
BHF-UCL PMID:17178715 PMID:21859974 MGI:5427070 MGI:5430893 NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261
JBrowse link
G Casq2 calsequestrin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16601229), (PMID:16908766)
(MGI:3689635|PMID:16932808)
(MGI:1202079|PMID:9525981)
PMID:17569730
BHF-UCL
UniProt
MGI
PMID:9525981 PMID:16601229 PMID:16908766 PMID:16932808 PMID:17569730 MGI:1202079 MGI:3689635 RGD:2314601 NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:4420848|PMID:20080623) BHF-UCL PMID:20080623 MGI:4420848 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in ISO (MGI:3621834|PMID:12837242) BHF-UCL PMID:12837242 MGI:3621834 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO (MGI:82999|PMID:8831698) MGI PMID:8831698 MGI:82999 NCBI chrNW_004955436:1,439,098...1,447,070
Ensembl chrNW_004955436:1,439,098...1,447,070
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (MGI:3621834|PMID:12837242) BHF-UCL PMID:12837242 MGI:3621834 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in ISO PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chrNW_004955441:7,653,107...8,037,784
Ensembl chrNW_004955441:7,656,031...7,957,640
JBrowse link
G Tmem38a transmembrane protein 38A acts_upstream_of_or_within ISO (MGI:3715564|PMID:17611541) MGI PMID:17611541 MGI:3715564 NCBI chrNW_004955524:1,132,111...1,144,335
Ensembl chrNW_004955524:1,132,111...1,144,380
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (MGI:3715564|PMID:17611541) MGI PMID:17611541 MGI:3715564 NCBI chrNW_004955419:20,811,931...20,844,420
Ensembl chrNW_004955419:20,812,702...20,878,599
JBrowse link
regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asph aspartate beta-hydroxylase involved_in ISO (PMID:21062895) UniProt PMID:21062895 NCBI chrNW_004955444:17,116,060...17,320,966
Ensembl chrNW_004955444:17,121,559...17,318,295
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (MGI:3621681|PMID:11086997) MGI PMID:11086997 MGI:3621681 NCBI chrNW_004955409:2,409,503...2,530,539
Ensembl chrNW_004955409:2,428,815...2,530,012
JBrowse link
regulation of release of sequestered calcium ion into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276) BHF-UCL PMID:17242276 NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO (MGI:5548044|PMID:24185898) MGI PMID:24185898 MGI:5548044 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827
JBrowse link
G Coro1a coronin 1A acts_upstream_of_or_within ISO (MGI:5559799|PMID:24270184) MGI PMID:24270184 MGI:5559799 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485
JBrowse link
G Diaph1 diaphanous related formin 1 involved_in ISO (PMID:15123714) BHF-UCL PMID:15123714 NCBI chrNW_004955415:12,156,152...12,272,961
Ensembl chrNW_004955415:12,156,152...12,272,961
JBrowse link
G Itgb3 integrin subunit beta 3 ISO RGD PMID:7689577 RGD:8693381 NCBI chrNW_004955478:9,788,192...9,830,254 JBrowse link
G Lime1 Lck interacting transmembrane adaptor 1 acts_upstream_of_or_within ISO (MGI:3769059|PMID:16249387) MGI PMID:16249387 MGI:3769059 NCBI chrNW_004955528:490,319...492,943 JBrowse link
G LOC102004641 cytochrome b-245 light chain acts_upstream_of_or_within ISO (MGI:5548044|PMID:24185898) MGI PMID:24185898 MGI:5548044 NCBI chrNW_004955541:2,570,843...2,573,822
Ensembl chrNW_004955541:2,569,727...2,574,118
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:5471851|PMID:23509253) RGD
MGI
PMID:16177098 PMID:23509253 MGI:5471851 RGD:1578516 NCBI chrNW_004955454:15,025,967...15,111,142
Ensembl chrNW_004955454:15,035,979...15,111,142
JBrowse link
G Ms4a2 membrane spanning 4-domains A2 ISO RGD PMID:16177098 RGD:1578516 NCBI chrNW_004955511:4,377,894...4,400,797
Ensembl chrNW_004955511:4,380,502...4,400,852
JBrowse link
G Ngf nerve growth factor acts_upstream_of_or_within ISO (MGI:5559803|PMID:24265601) MGI PMID:24265601 MGI:5559803 NCBI chrNW_004955435:18,581,889...18,633,330
Ensembl chrNW_004955435:18,581,808...18,601,059
JBrowse link
G Prkce protein kinase C epsilon acts_upstream_of_or_within ISO (MGI:5475040|PMID:23479225)
(MGI:3580969|PMID:15905535)
MGI PMID:15905535 PMID:23479225 MGI:3580969 MGI:5475040 NCBI chrNW_004955441:12,642,703...13,142,396
Ensembl chrNW_004955441:12,642,697...13,139,372
JBrowse link
G Prkd1 protein kinase D1 acts_upstream_of_or_within ISO (MGI:5475040|PMID:23479225) MGI PMID:23479225 MGI:5475040 NCBI chrNW_004955409:30,554,095...30,860,588
Ensembl chrNW_004955409:30,554,013...30,860,649
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (MGI:3583523|PMID:12960403) UniProt PMID:12960403 MGI:3583523 NCBI chrNW_004955403:49,856,056...49,970,800
Ensembl chrNW_004955403:49,855,541...49,973,225
JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of_or_within ISO (MGI:5471851|PMID:23509253) MGI PMID:23509253 MGI:5471851 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177
JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing B acts_upstream_of_or_within ISO (MGI:4838721|PMID:20585042) MGI PMID:20585042 MGI:4838721 NCBI chrNW_004955412:23,518,851...23,667,617
Ensembl chrNW_004955412:23,518,240...23,667,697
JBrowse link
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calm1 calmodulin 1 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028
JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924
JBrowse link
G Camk2d calcium/calmodulin dependent protein kinase II delta involved_in ISO PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chrNW_004955428:25,583,501...25,880,395 JBrowse link
G Casq1 calsequestrin 1 acts_upstream_of_or_within ISO (MGI:3814667|PMID:17627988)
(MGI:2449410|PMID:12419813)
MGI PMID:12419813 PMID:17627988 MGI:2449410 MGI:3814667 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
JBrowse link
G Casq2 calsequestrin 2 involved_in ISO (PMID:15041652)
(MGI:3689635|PMID:16932808)
BHF-UCL
UniProt
PMID:15041652 PMID:16932808 MGI:3689635 NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO (MGI:5694290|PMID:26102480) MGI PMID:26102480 MGI:5694290 NCBI chrNW_004955444:17,859,999...18,067,623
Ensembl chrNW_004955444:17,858,771...18,067,248
JBrowse link
G Clic2 chloride intracellular channel 2 involved_in ISO (PMID:15147738), (PMID:15916532) BHF-UCL PMID:15147738 PMID:15916532 NCBI chrNW_004955594:374,332...393,802
Ensembl chrNW_004955594:374,208...393,389
JBrowse link
G Dhrs7c dehydrogenase/reductase 7C acts_upstream_of_or_within ISO (MGI:5306721|PMID:21995425) MGI PMID:21995425 MGI:5306721 NCBI chrNW_004955467:7,330,267...7,341,897
Ensembl chrNW_004955467:7,330,188...7,342,053
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:4420848|PMID:20080623), (MGI:5487906|PMID:23263329) BHF-UCL PMID:20080623 PMID:23263329 MGI:4420848 MGI:5487906 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in
acts_upstream_of_or_within
ISO (PMID:20431056)
(MGI:3639647|PMID:16672364)
(MGI:3028710|PMID:14592808), (MGI:5007884|PMID:19578067)
BHF-UCL
MGI
PMID:14592808 PMID:16672364 PMID:19578067 PMID:20431056 MGI:3028710 MGI:3639647 MGI:5007884 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Hrc histidine rich calcium binding protein involved_in ISO (PMID:24125847) BHF-UCL PMID:24125847 NCBI chrNW_004955559:1,583,661...1,587,457
Ensembl chrNW_004955559:1,583,876...1,587,355
JBrowse link
G Mettl21c methyltransferase 21C, AARS1 lysine acts_upstream_of_or_within ISO (MGI:5781029|PMID:24677265) MGI PMID:24677265 MGI:5781029 NCBI chrNW_004955404:8,447,359...8,460,853
Ensembl chrNW_004955404:8,447,359...8,460,847
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO PMID:23382383 UniProt PMID:23382383 RGD:10047354 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095
JBrowse link
G Pde4d phosphodiesterase 4D involved_in ISO (MGI:3690823|PMID:16213210) BHF-UCL PMID:16213210 MGI:3690823 NCBI chrNW_004955446:7,914,326...9,252,527
Ensembl chrNW_004955446:8,211,877...9,252,653
JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO (MGI:3655341|PMID:9118481) MGI PMID:9118481 MGI:3655341 NCBI chrNW_004955436:1,439,098...1,447,070
Ensembl chrNW_004955436:1,439,098...1,447,070
JBrowse link
G Trdn triadin involved_in ISO (PMID:15041652) RGD
BHF-UCL
PMID:15041652 PMID:17569730 RGD:2314601 NCBI chrNW_004955436:4,963,945...5,266,727 JBrowse link
regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calm1 calmodulin 1 involved_in ISO (PMID:22067155) RGD
UniProt
PMID:15628869 PMID:22067155 RGD:7241270 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028
JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:22067155) RGD
UniProt
PMID:15628869 PMID:22067155 RGD:7241270 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:22067155) RGD
UniProt
PMID:15628869 PMID:22067155 RGD:7241270 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:4420848|PMID:20080623) BHF-UCL PMID:20080623 MGI:4420848 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (PMID:7592869)
(MGI:1195585|PMID:9461216)
BHF-UCL PMID:7592869 PMID:9461216 MGI:1195585 NCBI chrNW_004955596:580,106...606,210
Ensembl chrNW_004955596:580,106...603,255
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in
NOT|involved_in
ISO (PMID:7592869)
(MGI:3621834|PMID:12837242)
(MGI:3836106|PMID:17921453)
(PMID:17921453)
(PMID:20431056)
BHF-UCL PMID:7592869 PMID:12837242 PMID:17921453 PMID:20431056 MGI:3621834 MGI:3836106 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Hrc histidine rich calcium binding protein involved_in ISO (PMID:24125847) BHF-UCL PMID:24125847 NCBI chrNW_004955559:1,583,661...1,587,457
Ensembl chrNW_004955559:1,583,876...1,587,355
JBrowse link
G Jph3 junctophilin 3 involved_in ISO (MGI:3654871|PMID:16809425) UniProt PMID:16809425 MGI:3654871 NCBI chrNW_004955541:1,969,197...2,020,868
Ensembl chrNW_004955541:1,969,194...2,017,588
JBrowse link
G Jsrp1 junctional sarcoplasmic reticulum protein 1 acts_upstream_of_or_within ISO (MGI:3625379|PMID:16638807) MGI PMID:16638807 MGI:3625379 NCBI chrNW_004955495:5,886,008...5,893,227
Ensembl chrNW_004955495:5,890,226...5,893,135
JBrowse link
G Pde4d phosphodiesterase 4D involved_in ISO (MGI:3690823|PMID:16213210) BHF-UCL PMID:16213210 MGI:3690823 NCBI chrNW_004955446:7,914,326...9,252,527
Ensembl chrNW_004955446:8,211,877...9,252,653
JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO (MGI:1352171|PMID:10603936) MGI PMID:10603936 MGI:1352171 NCBI chrNW_004955436:1,439,098...1,447,070
Ensembl chrNW_004955436:1,439,098...1,447,070
JBrowse link
G Selenon selenoprotein N involved_in ISO (PMID:18713863) UniProt PMID:18713863 NCBI chrNW_004955452:5,295,716...5,311,113
Ensembl chrNW_004955452:5,296,035...5,309,102
JBrowse link
regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 involved_in
acts_upstream_of_or_within
ISO (MGI:5306707|PMID:22049211)
(MGI:3814667|PMID:17627988)
UniProt
MGI
PMID:17627988 PMID:22049211 MGI:3814667 MGI:5306707 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:3837615|PMID:19198614) BHF-UCL PMID:19198614 MGI:3837615 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
release of sequestered calcium ion into cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbc3 BCL2 binding component 3 involved_in ISO (PMID:17024184) UniProt PMID:17024184 NCBI chrNW_004955574:1,167,790...1,174,966
Ensembl chrNW_004955574:1,167,242...1,174,966
JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:14592837) BHF-UCL PMID:14592837 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:14592837) BHF-UCL PMID:14592837 NCBI chrNW_004955472:1,427,660...1,428,771
Ensembl chrNW_004955472:1,427,710...1,429,102
JBrowse link
G Cherp calcium homeostasis endoplasmic reticulum protein involved_in ISO (PMID:12656674) UniProt PMID:12656674 NCBI chrNW_004955524:1,224,698...1,235,192
Ensembl chrNW_004955524:1,224,897...1,234,758
JBrowse link
G Ddit3 DNA damage inducible transcript 3 involved_in ISO (MGI:4366390|PMID:19752026) UniProt PMID:19752026 MGI:4366390 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513
JBrowse link
G Drd2 dopamine receptor D2 involved_in ISO PMID:8371717 BHF-UCL PMID:8371717 RGD:8554702 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha involved_in ISO (MGI:4366390|PMID:19752026) UniProt PMID:19752026 MGI:4366390 NCBI chrNW_004955409:10,495,892...10,533,383
Ensembl chrNW_004955409:10,502,554...10,530,376
JBrowse link
G F2r coagulation factor II thrombin receptor ISO RGD PMID:15145074 RGD:1582290 NCBI chrNW_004955425:24,144,905...24,164,498 JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:20011604) DFLAT PMID:20011604 NCBI chrNW_004955428:17,840,554...17,894,779
Ensembl chrNW_004955428:17,840,628...17,894,773
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A acts_upstream_of_or_within ISO (MGI:3513875|PMID:15289441)
(MGI:2665228|PMID:12704193)
MGI PMID:12704193 PMID:15289441 MGI:2665228 MGI:3513875 NCBI chrNW_004955596:580,106...606,210
Ensembl chrNW_004955596:580,106...603,255
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B acts_upstream_of_or_within ISO (MGI:3615100|PMID:15024040) MGI PMID:15024040 MGI:3615100 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Glp1r glucagon like peptide 1 receptor ISO RGD PMID:15789279 RGD:1598438 NCBI chrNW_004955437:4,394,088...4,418,172
Ensembl chrNW_004955437:4,395,039...4,418,186
JBrowse link
G Gp1ba glycoprotein Ib platelet subunit alpha involved_in ISO (PMID:1939645) ComplexPortal PMID:1939645 NCBI chrNW_004955467:10,333,537...10,347,488
Ensembl chrNW_004955467:10,333,575...10,346,989
JBrowse link
G Gp1bb glycoprotein Ib platelet subunit beta involved_in ISO (PMID:1939645) ComplexPortal PMID:1939645 NCBI chrNW_004955442:18,359,664...18,360,979
Ensembl chrNW_004955442:18,359,664...18,360,979
JBrowse link
G Gp5 glycoprotein V platelet involved_in ISO (PMID:1939645) ComplexPortal PMID:1939645 NCBI chrNW_004955420:14,377,800...14,382,003 JBrowse link
G Gp9 glycoprotein IX platelet involved_in ISO (PMID:1939645) ComplexPortal PMID:1939645 NCBI chrNW_004955450:10,478,165...10,479,425
Ensembl chrNW_004955450:10,478,165...10,479,425
JBrowse link
G Hcrt hypocretin neuropeptide precursor NOT ISO cortical neurons RGD PMID:15858425 RGD:1600997 NCBI chrNW_004955451:16,235,819...16,237,457
Ensembl chrNW_004955451:16,235,819...16,237,457
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A involved_in ISO (PMID:15862800)
(PMID:18703043)
UniProt PMID:15862800 PMID:18703043 NCBI chrNW_004955431:583,165...646,991
Ensembl chrNW_004955431:580,713...647,345
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISO (PMID:15862800)
(PMID:18566482), (PMID:18703043), (PMID:8882600)
UniProt PMID:8882600 PMID:15862800 PMID:18566482 PMID:18703043 NCBI chrNW_004955453:4,352,278...4,367,807
Ensembl chrNW_004955453:4,351,668...4,367,807
JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C involved_in ISO (PMID:18703043) UniProt PMID:18703043 NCBI chrNW_004955490:912,615...1,126,347
Ensembl chrNW_004955490:910,415...1,126,373
JBrowse link
G Ibtk inhibitor of Bruton tyrosine kinase acts_upstream_of_or_within ISO (PMID:11577348) MGI PMID:11577348 NCBI chrNW_004955411:10,052,584...10,132,203
Ensembl chrNW_004955411:10,051,296...10,132,203
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 involved_in ISO PMID:23166348 BHF-UCL PMID:23166348 RGD:12790654 NCBI chrNW_004955413:21,289,673...21,719,610
Ensembl chrNW_004955413:21,291,110...21,719,303
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:3687439|PMID:1505025) UniProt PMID:1505025 MGI:3687439 NCBI chrNW_004955452:10,608,317...10,632,310
Ensembl chrNW_004955452:10,608,318...10,632,310
JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 ISO RGD PMID:17613490 RGD:7205504 NCBI chrNW_004955563:1,703,408...1,712,908
Ensembl chrNW_004955563:1,703,416...1,745,996
JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (MGI:3772417|PMID:18082965) MGI PMID:18082965 MGI:3772417 NCBI chrNW_004955482:7,048,674...7,087,525
Ensembl chrNW_004955482:7,048,776...7,086,926
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within
ISO (PMID:19265036)
(MGI:5315687|PMID:19265036)
(MGI:3708075|PMID:17404231)
(PMID:11854751)
BHF-UCL
MGI
PMID:11854751 PMID:17404231 PMID:19265036 MGI:3708075 MGI:5315687 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:11606584)
(MGI:1861532|PMID:10925250)
UniProt PMID:10925250 PMID:11606584 MGI:1861532 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in ISO (MGI:1345540|PMID:10508267) UniProt PMID:10508267 MGI:1345540 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11741831), (PMID:16163667)
(MGI:2665228|PMID:12704193)
PMID:19116207
UniProt
MGI
BHF-UCL
PMID:11741831 PMID:12704193 PMID:16163667 PMID:19116207 MGI:2665228 RGD:7242196 NCBI chrNW_004955468:879,807...1,000,118
Ensembl chrNW_004955468:879,951...1,000,036
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:12443530), (PMID:17921453) BHF-UCL PMID:12443530 PMID:17921453 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (MGI:3850579|PMID:19515693) MGI PMID:19515693 MGI:3850579 NCBI chrNW_004955419:20,811,931...20,844,420
Ensembl chrNW_004955419:20,812,702...20,878,599
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (MGI:5285159|PMID:20495006), (MGI:5691857|PMID:25144390) UniProt PMID:20495006 PMID:25144390 MGI:5285159 MGI:5691857 NCBI chrNW_004955422:16,899,730...16,923,962 JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 involved_in ISO (PMID:27068538)
(MGI:5298324|PMID:21753080)
UniProt PMID:21753080 PMID:27068538 MGI:5298324 NCBI chrNW_004955407:41,062,217...41,110,500
Ensembl chrNW_004955407:41,057,941...41,110,668
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 acts_upstream_of_or_within
involved_in
ISO (MGI:1344950|PMID:10518929)
(MGI:77040|PMID:7973732)
MGI
BHF-UCL
PMID:7973732 PMID:10518929 MGI:1344950 MGI:77040 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
release of sequestered calcium ion into cytosol by endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faslg Fas ligand acts_upstream_of_or_within ISO (PMID:26582200) MGI PMID:26582200 NCBI chrNW_004955406:13,098,479...13,107,045
Ensembl chrNW_004955406:13,098,662...13,107,389
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (MGI:6141091|PMID:27188440) MGI PMID:27188440 MGI:6141091 NCBI chrNW_004955419:20,811,931...20,844,420
Ensembl chrNW_004955419:20,812,702...20,878,599
JBrowse link
release of sequestered calcium ion into cytosol by sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nol3 nucleolar protein 3 involved_in ISO (PMID:15509781) UniProt PMID:15509781 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISO PMID:11316255
(MGI:3764002|PMID:18003898)
UniProt PMID:11316255 PMID:18003898 MGI:3764002 RGD:12903237 NCBI chrNW_004955468:879,807...1,000,118
Ensembl chrNW_004955468:879,951...1,000,036
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12919952)
(MGI:4442115|PMID:20226167)
(MGI:2182484|PMID:12089338)
BHF-UCL
MGI
PMID:12089338 PMID:12919952 PMID:20226167 MGI:2182484 MGI:4442115 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Tmem38a transmembrane protein 38A acts_upstream_of_or_within ISO (MGI:3715564|PMID:17611541) MGI PMID:17611541 MGI:3715564 NCBI chrNW_004955524:1,132,111...1,144,335
Ensembl chrNW_004955524:1,132,111...1,144,380
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO (MGI:3715564|PMID:17611541) MGI PMID:17611541 MGI:3715564 NCBI chrNW_004955419:20,811,931...20,844,420
Ensembl chrNW_004955419:20,812,702...20,878,599
JBrowse link
G Trdn triadin acts_upstream_of_or_within ISO (MGI:3849347|PMID:19383796) MGI PMID:19383796 MGI:3849347 NCBI chrNW_004955436:4,963,945...5,266,727 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12096
    localization 4894
      cellular localization 2422
        establishment of localization in cell 1738
          calcium ion transport into cytosol 160
            calcium ion import into cytosol + 21
            calcium ion transmembrane import into cytosol + 137
            negative regulation of calcium ion transport into cytosol + 18
            positive regulation of calcium ion transport into cytosol + 64
            regulation of calcium ion transport into cytosol + 109
Path 2
Term Annotations click to browse term
  biological_process 12096
    biological regulation 8911
      regulation of biological quality 3329
        homeostatic process 1690
          chemical homeostasis 1103
            ion homeostasis 692
              cation homeostasis 638
                divalent inorganic cation homeostasis 456
                  cellular divalent inorganic cation homeostasis 426
                    cellular calcium ion homeostasis 406
                      regulation of cytosolic calcium ion concentration 314
                        positive regulation of cytosolic calcium ion concentration 275
                          calcium ion transport into cytosol 160
                            calcium ion import into cytosol + 21
                            calcium ion transmembrane import into cytosol + 137
                            negative regulation of calcium ion transport into cytosol + 18
                            positive regulation of calcium ion transport into cytosol + 64
                            regulation of calcium ion transport into cytosol + 109
paths to the root