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ONTOLOGY REPORT - ANNOTATIONS


Term:bone development
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Accession:GO:0060348 term browser browse the term
Definition:The process whose specific outcome is the progression of bone over time, from its formation to the mature structure. Bone is the hard skeletal connective tissue consisting of both mineral and cellular components.


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bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP13 A-kinase anchoring protein 13 ISO (MGI:MGI:5770225|PMID:25892096) UniProtKB PMID:25892096 MGI:MGI:5770225 NCBI chr15:64,076,422...64,438,109
Ensembl chr15:83,387,667...83,651,362
JBrowse link
G AMER1 APC membrane recruitment protein 1 ISO (MGI:MGI:5013668|PMID:21571217) MGI PMID:21571217 MGI:MGI:5013668 NCBI chr  X:53,309,868...53,331,151
Ensembl chr  X:63,396,392...63,399,802
JBrowse link
G ANKRD11 ankyrin repeat domain 11 ISO (MGI:MGI:3796348|PMID:17986521) MGI PMID:17986521 MGI:MGI:3796348 NCBI chr16:69,994,926...70,242,659
Ensembl chr16:89,633,849...89,683,311
JBrowse link
G ASXL1 ASXL transcriptional regulator 1 ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr20:28,647,004...28,727,865
Ensembl chr20:29,774,582...29,850,453
JBrowse link
G BBX BBX high mobility group box domain containing ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr 3:104,655,522...104,943,193
Ensembl chr 3:111,728,655...111,872,357
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein ISO RGD PMID:3488316 RGD:2316176 NCBI chr 1:131,583,789...131,586,459
Ensembl chr 1:135,413,871...135,416,432
JBrowse link
G BGN biglycan ISO (MGI:MGI:5644410|PMID:19932218) MGI PMID:19932218 MGI:MGI:5644410 NCBI chr  X:143,045,298...143,059,892
Ensembl chr  X:152,931,608...152,946,292
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (MGI:MGI:63654|PMID:8358941) MGI PMID:8358941 MGI:MGI:63654 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G CADM1 cell adhesion molecule 1 ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr11:110,008,314...110,347,876
Ensembl chr11:113,950,291...114,280,324
JBrowse link
G CCN4 cellular communication network factor 4 ISO (MGI:MGI:5788182|PMID:25864198), (MGI:MGI:6294593|PMID:15331410) UniProt PMID:15331410, PMID:25864198 MGI:MGI:5788182, MGI:MGI:6294593 NCBI chr 8:129,842,580...129,884,528
Ensembl chr 8:132,818,397...132,858,861
JBrowse link
G CFH complement factor H ISO (MGI:MGI:4421084|PMID:19828624) MGI PMID:19828624 MGI:MGI:4421084 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CHAD chondroadherin ISO (MGI:MGI:5525032|PMID:23755099) MGI PMID:23755099 MGI:MGI:5525032 NCBI chr17:44,558,931...44,565,450
Ensembl chr17:49,432,883...49,437,337
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO (MGI:MGI:1933050|PMID:11254354) MGI PMID:11254354 MGI:MGI:1933050 NCBI chr12:40,726,137...40,757,690 JBrowse link
G CR2 complement C3d receptor 2 ISO (MGI:MGI:4421084|PMID:19828624) MGI PMID:19828624 MGI:MGI:4421084 NCBI chr 1:183,052,798...183,088,385
Ensembl chr 1:187,330,483...187,366,069
JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:15012600 RGD:4891061 NCBI chr15:30,152,924...30,282,854
Ensembl chr15:48,486,688...48,521,554
JBrowse link
G DBH dopamine beta-hydroxylase ISO RGD PMID:20090303 RGD:5129678 NCBI chr 9:104,761,504...104,784,445
Ensembl chr 9:133,371,821...133,393,697
JBrowse link
G DYM dymeclin ISO (PMID:21280149) UniProtKB PMID:21280149 NCBI chr18:42,427,493...42,842,450
Ensembl chr18:45,783,379...46,162,835
JBrowse link
G ENG endoglin ISO humerus RGD PMID:20865666 RGD:7257537 NCBI chr 9:98,934,080...98,973,862
Ensembl chr 9:127,605,608...127,644,641
JBrowse link
G EPYC epiphycan ISO (MGI:MGI:5644410|PMID:19932218) MGI PMID:19932218 MGI:MGI:5644410 NCBI chr12:88,497,063...88,538,440
Ensembl chr12:91,812,513...91,853,875
JBrowse link
G FGF8 fibroblast growth factor 8 ISO (PMID:18596921) UniProtKB PMID:18596921 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO (MGI:MGI:3688953|PMID:16989802) MGI PMID:16989802 MGI:MGI:3688953 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 ISO (MGI:MGI:4437389|PMID:20053668) MGI PMID:20053668 MGI:MGI:4437389 NCBI chr 4:1,933,172...1,948,742 JBrowse link
G GJA1 gap junction protein alpha 1 ISO (MGI:MGI:6274948|PMID:25270829) UniProt PMID:25270829 MGI:MGI:6274948 NCBI chr 6:119,213,513...119,227,617 JBrowse link
G HOXA11 homeobox A11 ISO (MGI:MGI:72977|PMID:7789268) MGI PMID:7789268 MGI:MGI:72977 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103
JBrowse link
G HSD17B1 hydroxysteroid 17-beta dehydrogenase 1 ISO RGD PMID:15012600 RGD:4891061 NCBI chr17:14,760,856...14,763,584
Ensembl chr17:14,986,814...14,988,820
JBrowse link
G HSD17B2 hydroxysteroid 17-beta dehydrogenase 2 ISO RGD PMID:15012600 RGD:4891061 NCBI chr16:62,642,316...62,705,261
Ensembl chr16:82,062,042...82,125,139
JBrowse link
G IDUA alpha-L-iduronidase ISO (MGI:MGI:4414887|PMID:19751987) MGI PMID:19751987 MGI:MGI:4414887 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877
JBrowse link
G IFT172 intraflagellar transport 172 ISO (MGI:MGI:5285455|PMID:21653639) MGI PMID:21653639 MGI:MGI:5285455 NCBI chr2A:27,448,139...27,492,302
Ensembl chr2A:27,536,534...27,580,406
JBrowse link
G IGF1 insulin like growth factor 1 ISO RGD PMID:24735836 RGD:11352746 NCBI chr12:99,986,887...100,066,773 JBrowse link
G LOC100990650 guanine nucleotide-binding protein G(s) subunit alpha ISO (PMID:12719376) UniProtKB PMID:12719376 NCBI chr20:55,190,607...55,262,245 JBrowse link
G LRP5 LDL receptor related protein 5 ISO (MGI:MGI:4835143|PMID:17700537) BHF-UCL PMID:17700537 MGI:MGI:4835143 NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
JBrowse link
G MCPH1 microcephalin 1 ISO (MGI:MGI:5502489|PMID:23516444) MGI PMID:23516444 MGI:MGI:5502489 NCBI chr 8:624,877...877,839
Ensembl chr 8:6,409,072...6,646,394
JBrowse link
G MIGA2 mitoguardin 2 ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr 9:100,160,068...100,197,095
Ensembl chr 9:128,820,773...128,856,977
JBrowse link
G MMP14 matrix metallopeptidase 14 ISO (MGI:MGI:3771253|PMID:18022611) MGI PMID:18022611 MGI:MGI:3771253 NCBI chr14:3,654,125...3,665,158
Ensembl chr14:21,753,305...21,764,058
JBrowse link
G MMP16 matrix metallopeptidase 16 ISO (MGI:MGI:3771253|PMID:18022611) MGI PMID:18022611 MGI:MGI:3771253 NCBI chr 8:84,736,752...85,026,711
Ensembl chr 8:86,701,882...86,982,518
JBrowse link
G MYOC myocilin ISO (MGI:MGI:5503270|PMID:23629661) UniProtKB PMID:23629661 MGI:MGI:5503270 NCBI chr 1:147,128,541...147,146,227
Ensembl chr 1:150,841,630...150,858,628
JBrowse link
G NOS3 nitric oxide synthase 3 ISO femur RGD PMID:10352094 RGD:7794707 NCBI chr 7:142,577,334...142,600,702
Ensembl chr 7:154,730,009...154,755,233
JBrowse link
G NPR2 natriuretic peptide receptor 2 ISO (MGI:MGI:54411|PMID:624676) MGI PMID:624676 MGI:MGI:54411 NCBI chr 9:35,642,534...35,660,210
Ensembl chr 9:36,445,576...36,462,637
JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 ISO (MGI:MGI:3850584|PMID:19483677) MGI PMID:19483677 MGI:MGI:3850584 NCBI chr 4:2,009,276...2,119,182
Ensembl chr 4:1,945,307...2,027,425
JBrowse link
G OPA3 outer mitochondrial membrane lipid metabolism regulator OPA3 ISO (MGI:MGI:5810498|PMID:27106103) MGI PMID:27106103 MGI:MGI:5810498 NCBI chr19:42,477,467...42,546,814
Ensembl chr19:51,073,322...51,130,555
JBrowse link
G P3H1 prolyl 3-hydroxylase 1 ISO (PMID:17277775), (PMID:22615817) UniProtKB PMID:17277775, PMID:22615817 NCBI chr 1:42,046,128...42,065,718
Ensembl chr 1:43,423,900...43,443,336
JBrowse link
G PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 ISO (MGI:MGI:54411|PMID:624676) MGI PMID:624676 MGI:MGI:54411 NCBI chr10:84,383,936...84,471,745
Ensembl chr10:87,890,631...87,977,839
JBrowse link
G PDGFA platelet derived growth factor subunit A ISO (MGI:MGI:5543868|PMID:23938297) MGI PMID:23938297 MGI:MGI:5543868 NCBI chr 7:648,722...672,023 JBrowse link
G PDGFC platelet derived growth factor C ISO (MGI:MGI:5543868|PMID:23938297) MGI PMID:23938297 MGI:MGI:5543868 NCBI chr 4:149,105,330...149,317,254
Ensembl chr 4:160,922,827...161,131,960
JBrowse link
G PHEX phosphate regulating endopeptidase homolog X-linked ISO RGD PMID:11064151 RGD:11556272 NCBI chr  X:14,663,847...14,859,294
Ensembl chr  X:22,017,681...22,232,501
JBrowse link
G PLS3 plastin 3 ISO (PMID:24088043) UniProtKB PMID:24088043 NCBI chr  X:104,656,110...104,745,702
Ensembl chr  X:115,160,032...115,250,144
JBrowse link
G POC1A POC1 centriolar protein A ISO (MGI:MGI:5700251|PMID:26496357) MGI PMID:26496357 MGI:MGI:5700251 NCBI chr 3:52,016,372...52,096,073
Ensembl chr 3:53,245,162...53,324,579
JBrowse link
G PPIB peptidylprolyl isomerase B ISO (PMID:20089953) UniProtKB PMID:20089953 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758
JBrowse link
G PRPSAP2 phosphoribosyl pyrophosphate synthetase associated protein 2 ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr17:32,316,289...32,392,531
Ensembl chr17:37,247,504...37,320,704
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO PMID:19233324 UniProt PMID:19233324 RGD:8554254 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148
JBrowse link
G RARA retinoic acid receptor alpha ISO (MGI:MGI:1096258|PMID:9376317), (MGI:MGI:69060|PMID:7607067) MGI PMID:7607067, PMID:9376317 MGI:MGI:1096258, MGI:MGI:69060 NCBI chr17:16,932,485...16,980,958 JBrowse link
G RARB retinoic acid receptor beta ISO (MGI:MGI:69060|PMID:7607067) MGI PMID:7607067 MGI:MGI:69060 NCBI chr 3:24,729,220...25,499,187
Ensembl chr 3:25,660,922...25,833,297
JBrowse link
G RARG retinoic acid receptor gamma ISO (MGI:MGI:3848572|PMID:19389355)
(MGI:MGI:69060|PMID:7607067)
(MGI:MGI:1096258|PMID:9376317), (MGI:MGI:69060|PMID:7607067)
UniProtKB
MGI
PMID:7607067, PMID:9376317, PMID:19389355 MGI:MGI:1096258, MGI:MGI:3848572, MGI:MGI:69060 NCBI chr12:35,521,276...35,542,814
Ensembl chr12:36,303,359...36,325,111
JBrowse link
G RPL13 ribosomal protein L13 ISO (PMID:31630789) UniProt PMID:31630789 NCBI chr16:70,312,241...70,314,956 JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr 1:126,275,719...126,314,043
Ensembl chr 1:129,925,009...129,962,442
JBrowse link
G SH3PXD2B SH3 and PX domains 2B ISO (MGI:MGI:4439252|PMID:20137777)
(PMID:20137777)
UniProtKB PMID:20137777 MGI:MGI:4439252 NCBI chr 5:167,678,633...167,807,960
Ensembl chr 5:174,591,759...174,719,957
JBrowse link
G SLC10A7 solute carrier family 10 member 7 ISO (PMID:30082715)
(MGI:MGI:6198941|PMID:30082715)
UniProt PMID:30082715 MGI:MGI:6198941 NCBI chr 4:138,592,266...138,857,833
Ensembl chr 4:150,251,966...150,510,812
JBrowse link
G SLC38A10 solute carrier family 38 member 10 ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr17:75,671,287...75,722,296
Ensembl chr17:81,399,832...81,451,077
JBrowse link
G SMAD1 SMAD family member 1 ISO (MGI:MGI:3840027|PMID:19224984) MGI PMID:19224984 MGI:MGI:3840027 NCBI chr 4:137,822,269...137,899,700
Ensembl chr 4:149,481,836...149,558,135
JBrowse link
G SMAD5 SMAD family member 5 ISO (MGI:MGI:3840027|PMID:19224984) MGI PMID:19224984 MGI:MGI:3840027 NCBI chr 5:131,524,229...131,574,119
Ensembl chr 5:137,664,067...137,712,635
JBrowse link
G SMAD9 SMAD family member 9 ISO (MGI:MGI:3840027|PMID:19224984) MGI PMID:19224984 MGI:MGI:3840027 NCBI chr13:18,055,427...18,130,571
Ensembl chr13:36,486,597...36,521,646
JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 ISO (MGI:MGI:5805317|PMID:27325675) MGI PMID:27325675 MGI:MGI:5805317 NCBI chr16:48,734,664...48,825,241
Ensembl chr16:68,131,905...68,142,871
JBrowse link
G SPARC secreted protein acidic and cysteine rich ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr 5:147,087,903...147,112,466
Ensembl chr 5:153,090,181...153,115,750
JBrowse link
G SPNS2 sphingolipid transporter 2 ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr17:4,554,524...4,593,873
Ensembl chr17:4,547,597...4,584,493
JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:15012600 RGD:4891061 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264
JBrowse link
G SRD5A2 steroid 5 alpha-reductase 2 ISO RGD PMID:15012600 RGD:4891061 NCBI chr2A:31,542,646...31,597,394
Ensembl chr2A:31,610,487...31,665,718
JBrowse link
G STC1 stanniocalcin 1 ISO (PMID:16377640) UniProtKB PMID:16377640 NCBI chr 8:23,089,339...23,102,245
Ensembl chr 8:20,023,469...20,036,321
JBrowse link
G SULF1 sulfatase 1 ISO (MGI:MGI:3769052|PMID:17593974) BHF-UCL PMID:17593974 MGI:MGI:3769052 NCBI chr 8:65,992,961...66,194,112
Ensembl chr 8:67,744,801...67,848,704
JBrowse link
G SULF2 sulfatase 2 ISO (MGI:MGI:3769052|PMID:17593974) BHF-UCL PMID:17593974 MGI:MGI:3769052 NCBI chr20:43,992,927...44,122,598
Ensembl chr20:45,074,069...45,173,893
JBrowse link
G TMEM38B transmembrane protein 38B ISO (MGI:MGI:6141091|PMID:27188440) MGI PMID:27188440 MGI:MGI:6141091 NCBI chr 9:76,854,177...76,938,334
Ensembl chr 9:104,980,935...105,128,988
JBrowse link
G TNFSF11 TNF superfamily member 11 ISO (MGI:MGI:5646594|PMID:26234751) MGI PMID:26234751 MGI:MGI:5646594 NCBI chr13:23,750,835...23,784,740 JBrowse link
G TRIM45 tripartite motif containing 45 ISO (MGI:MGI:5439228|PMID:22876197) MGI PMID:22876197 MGI:MGI:5439228 NCBI chr 1:85,398,904...85,409,600
Ensembl chr 1:120,394,090...120,403,622
JBrowse link
G TRIP11 thyroid hormone receptor interactor 11 ISO (MGI:MGI:4822550|PMID:20089971) MGI PMID:20089971 MGI:MGI:4822550 NCBI chr14:72,601,649...72,675,784
Ensembl chr14:91,945,392...92,019,231
JBrowse link
G TTC9 tetratricopeptide repeat domain 9 ISO (MGI:MGI:5903425|PMID:25798063) MGI PMID:25798063 MGI:MGI:5903425 NCBI chr14:51,229,734...51,262,455
Ensembl chr14:70,100,391...70,130,915
JBrowse link
G TULP3 TUB like protein 3 ISO (MGI:MGI:2136130|PMID:11406614) MGI PMID:11406614 MGI:MGI:2136130 NCBI chr12:3,012,890...3,061,831
Ensembl chr12:2,944,769...2,993,278
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 ISO RGD PMID:8773900 RGD:5131604 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G VKORC1 vitamin K epoxide reductase complex subunit 1 ISO (MGI:MGI:5559848|PMID:19492146) UniProtKB PMID:19492146 MGI:MGI:5559848 NCBI chr16:23,871,756...23,876,599
Ensembl chr16:31,459,560...31,464,897
JBrowse link
G WNT1 Wnt family member 1 ISO (PMID:23499309) UniProtKB PMID:23499309 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
JBrowse link
baculum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESR1 estrogen receptor 1 ISO RGD PMID:21471296 RGD:8552989 NCBI chr 6:149,507,599...149,918,523
Ensembl chr 6:154,317,002...154,631,551
JBrowse link
bone marrow development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASXL1 ASXL transcriptional regulator 1 ISO (MGI:MGI:4418016|PMID:19861679) MGI PMID:19861679 MGI:MGI:4418016 NCBI chr20:28,647,004...28,727,865
Ensembl chr20:29,774,582...29,850,453
JBrowse link
G CTC1 CST telomere replication complex component 1 ISO (MGI:MGI:5426340|PMID:22531781) MGI PMID:22531781 MGI:MGI:5426340 NCBI chr17:43,410,385...43,433,784
Ensembl chr17:48,142,864...48,165,537
JBrowse link
G HOXB4 homeobox B4 ISO (MGI:MGI:3045582|PMID:14962901) MGI PMID:14962901 MGI:MGI:3045582 NCBI chr17:8,958,253...8,961,261
Ensembl chr17:9,143,173...9,146,161
JBrowse link
G LRP5 LDL receptor related protein 5 ISO (PMID:17680723) BHF-UCL PMID:17680723 NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
JBrowse link
G LRRC17 leucine rich repeat containing 17 ISO (MGI:MGI:3850892|PMID:19336404) UniProtKB PMID:19336404 MGI:MGI:3850892 NCBI chr 7:94,884,624...94,917,576
Ensembl chr 7:107,756,505...107,767,445
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C ISO (PMID:21911094) UniProtKB PMID:21911094 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994
JBrowse link
G SBDS SBDS ribosome maturation factor ISO (PMID:15342903) UniProtKB PMID:15342903 NCBI chr 7:59,090,343...59,098,332 JBrowse link
G TP53 tumor protein p53 ISO (PMID:30146126) UniProt PMID:30146126 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR3 fibroblast growth factor receptor 3 ISO (MGI:MGI:4457789|PMID:20582225) BHF-UCL PMID:20582225 MGI:MGI:4457789 NCBI chr 4:1,933,172...1,948,742 JBrowse link
G LOC100971425 somatotropin ISO (PMID:20110402) BHF-UCL PMID:20110402 NCBI chr17:58,010,848...58,013,421 JBrowse link
G MBTPS2 membrane bound transcription factor peptidase, site 2 ISO (PMID:27380894) UniProt PMID:27380894 NCBI chr  X:14,470,268...14,529,854
Ensembl chr  X:21,825,780...21,883,550
JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO6 anoctamin 6 ISO (MGI:MGI:5486117|PMID:22936354) MGI PMID:22936354 MGI:MGI:5486117 NCBI chr12:43,295,928...43,512,073
Ensembl chr12:44,164,375...44,303,259
JBrowse link
G BMP2 bone morphogenetic protein 2 ISO (PMID:16433617) BHF-UCL PMID:16433617 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610
JBrowse link
G CCDC154 coiled-coil domain containing 154 ISO (MGI:MGI:5697796|PMID:20121924) MGI PMID:20121924 MGI:MGI:5697796 NCBI chr16:54,158...64,522
Ensembl chr16:1,488,750...1,498,293
JBrowse link
G IFT80 intraflagellar transport 80 ISO (MGI:MGI:5807019|PMID:26996322) MGI PMID:26996322 MGI:MGI:5807019 NCBI chr 3:157,279,076...157,421,478
Ensembl chr 3:165,329,056...165,454,905
JBrowse link
G IGF1 insulin like growth factor 1 ISO (PMID:16433617) BHF-UCL PMID:16433617 NCBI chr12:99,986,887...100,066,773 JBrowse link
G LEP leptin ISO RGD PMID:21353474 RGD:5128507 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519
JBrowse link
G PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 ISO (MGI:MGI:5008224|PMID:21272676) MGI PMID:21272676 MGI:MGI:5008224 NCBI chr17:8,373,032...8,381,410
Ensembl chr17:8,357,513...8,364,416
JBrowse link
G SNX10 sorting nexin 10 ISO (MGI:MGI:5688814|PMID:25811986) MGI PMID:25811986 MGI:MGI:5688814 NCBI chr 7:26,935,357...27,017,461
Ensembl chr 7:26,537,189...26,620,720
JBrowse link
bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP5 acid phosphatase 5, tartrate resistant ISO (MGI:MGI:83673|PMID:8898228) MGI PMID:8898228 MGI:MGI:83673 NCBI chr19:11,120,451...11,125,167
Ensembl chr19:11,832,575...11,835,203
JBrowse link
G ACTN3 actinin alpha 3 ISO (MGI:MGI:5291888|PMID:21784188) UniProtKB PMID:21784188 MGI:MGI:5291888 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429
JBrowse link
G CDX1 caudal type homeobox 1 ISO (MGI:MGI:2154839|PMID:11784046) MGI PMID:11784046 MGI:MGI:2154839 NCBI chr 5:145,591,186...145,608,976
Ensembl chr 5:151,592,139...151,614,257
JBrowse link
G CHSY1 chondroitin sulfate synthase 1 ISO (MGI:MGI:5316547|PMID:22280990) MGI PMID:22280990 MGI:MGI:5316547 NCBI chr15:79,901,340...79,976,067
Ensembl chr15:99,186,705...99,260,591
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ISO (MGI:MGI:4457799|PMID:20549734) MGI PMID:20549734 MGI:MGI:4457799 NCBI chr 6:137,134,142...137,136,550 JBrowse link
G COL9A1 collagen type IX alpha 1 chain ISO (MGI:MGI:3807836|PMID:18191556) MGI PMID:18191556 MGI:MGI:3807836 NCBI chr 6:68,051,446...68,138,715
Ensembl chr 6:71,349,471...71,436,370
JBrowse link
G COMP cartilage oligomeric matrix protein ISO (MGI:MGI:3807836|PMID:18191556) MGI PMID:18191556 MGI:MGI:3807836 NCBI chr19:18,222,270...18,230,936
Ensembl chr19:19,229,562...19,238,008
JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 ISO (PMID:22019272) UniProtKB PMID:22019272 NCBI chr2A:72,172,658...72,191,410
Ensembl chr2A:73,670,830...73,686,433
JBrowse link
G DHRS3 dehydrogenase/reductase 3 ISO (MGI:MGI:5528782|PMID:24005908) MGI PMID:24005908 MGI:MGI:5528782 NCBI chr 1:11,319,109...11,370,463
Ensembl chr 1:12,533,696...12,584,381
JBrowse link
G DLX5 distal-less homeobox 5 ISO (MGI:MGI:3611627|PMID:16330189) MGI PMID:16330189 MGI:MGI:3611627 NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186
JBrowse link
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4431165|PMID:20080592), (MGI:MGI:4834113|PMID:20404326) MGI PMID:20080592, PMID:20404326 MGI:MGI:4431165, MGI:MGI:4834113 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO (MGI:MGI:1346744|PMID:10518547) MGI PMID:10518547 MGI:MGI:1346744 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 ISO (MGI:MGI:4457789|PMID:20582225)
(MGI:MGI:4352984|PMID:19407216)
BHF-UCL
MGI
PMID:19407216, PMID:20582225 MGI:MGI:4352984, MGI:MGI:4457789 NCBI chr 4:1,933,172...1,948,742 JBrowse link
G GLG1 golgi glycoprotein 1 ISO (MGI:MGI:4829577|PMID:20530870) MGI PMID:20530870 MGI:MGI:4829577 NCBI chr16:55,014,892...55,172,877
Ensembl chr16:74,372,660...74,526,764
JBrowse link
G HAS2 hyaluronan synthase 2 ISO (MGI:MGI:4880794|PMID:21246657) MGI PMID:21246657 MGI:MGI:4880794 NCBI chr 8:118,313,186...118,342,160
Ensembl chr 8:121,072,154...121,089,365
JBrowse link
G IFITM5 interferon induced transmembrane protein 5 ISO (PMID:24519609)
(MGI:MGI:5607401|PMID:20838829)
UniProtKB PMID:20838829, PMID:24519609 MGI:MGI:5607401 NCBI chr11:294,184...295,525
Ensembl chr11:338,216...339,557
JBrowse link
G IFT80 intraflagellar transport 80 ISO (MGI:MGI:4940140|PMID:21227999) MGI PMID:21227999 MGI:MGI:4940140 NCBI chr 3:157,279,076...157,421,478
Ensembl chr 3:165,329,056...165,454,905
JBrowse link
G LRP5 LDL receptor related protein 5 ISO (PMID:19673927), (PMID:20146170), (PMID:20630166) BHF-UCL PMID:19673927, PMID:20146170, PMID:20630166 NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
JBrowse link
G LRP6 LDL receptor related protein 6 ISO MGI MGI:MGI:61254 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973
JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 ISO (MGI:MGI:2178869|PMID:11790802), (MGI:MGI:4829577|PMID:20530870) MGI PMID:11790802, PMID:20530870 MGI:MGI:2178869, MGI:MGI:4829577 NCBI chr11:60,897,897...60,917,690
Ensembl chr11:64,233,504...64,252,802
JBrowse link
G LTF lactotransferrin ISO (PMID:15166119) UniProtKB PMID:15166119 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
G MMP13 matrix metallopeptidase 13 ISO (PMID:16167086) UniProtKB PMID:16167086 NCBI chr11:97,890,811...97,902,778
Ensembl chr11:101,377,001...101,387,679
JBrowse link
G MSX1 msh homeobox 1 ISO (MGI:MGI:3608570|PMID:12489152), (MGI:MGI:3611627|PMID:16330189)
(MGI:MGI:3723565|PMID:17693062)
MGI PMID:12489152, PMID:16330189, PMID:17693062 MGI:MGI:3608570, MGI:MGI:3611627, MGI:MGI:3723565 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MSX2 msh homeobox 2 ISO (MGI:MGI:3723565|PMID:17693062) MGI PMID:17693062 MGI:MGI:3723565 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609
JBrowse link
G OSR2 odd-skipped related transciption factor 2 ISO (MGI:MGI:3818159|PMID:17547533) UniProtKB PMID:17547533 MGI:MGI:3818159 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669
JBrowse link
G PAPPA2 pappalysin 2 ISO (MGI:MGI:5502277|PMID:23457539) MGI PMID:23457539 MGI:MGI:5502277 NCBI chr 1:151,727,598...152,369,670
Ensembl chr 1:155,769,395...156,063,989
JBrowse link
G PAX1 paired box 1 ISO (MGI:MGI:69019|PMID:7607069) MGI PMID:7607069 MGI:MGI:69019 NCBI chr20:21,663,155...21,676,880 JBrowse link
G RARG retinoic acid receptor gamma ISO (MGI:MGI:2154839|PMID:11784046), (MGI:MGI:60925|PMID:8388780) MGI PMID:8388780, PMID:11784046 MGI:MGI:2154839, MGI:MGI:60925 NCBI chr12:35,521,276...35,542,814
Ensembl chr12:36,303,359...36,325,111
JBrowse link
G RIPPLY1 ripply transcriptional repressor 1 ISO (MGI:MGI:4459001|PMID:20346937) MGI PMID:20346937 MGI:MGI:4459001 NCBI chr  X:95,998,718...96,003,843
Ensembl chr  X:106,377,932...106,381,193
JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 ISO (MGI:MGI:4459001|PMID:20346937) MGI PMID:20346937 MGI:MGI:4459001 NCBI chr 6:81,748,370...81,754,129
Ensembl chr 6:85,022,737...85,027,930
JBrowse link
G SFRP2 secreted frizzled related protein 2 ISO (MGI:MGI:3806414|PMID:18729207) MGI PMID:18729207 MGI:MGI:3806414 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258
JBrowse link
G SFRP4 secreted frizzled related protein 4 ISO (PMID:27355534)
(MGI:MGI:5790095|PMID:27355534)
UniProtKB PMID:27355534 MGI:MGI:5790095 NCBI chr 7:38,542,105...38,553,008
Ensembl chr 7:38,764,146...38,774,264
JBrowse link
G SKI SKI proto-oncogene ISO (MGI:MGI:1095997|PMID:9284043) MGI PMID:9284043 MGI:MGI:1095997 NCBI chr 1:944,428...1,029,695
Ensembl chr 1:2,091,620...2,174,080
JBrowse link
G SP5 Sp5 transcription factor ISO (MGI:MGI:1927252|PMID:11071760) MGI PMID:11071760 MGI:MGI:1927252 NCBI chr2B:58,000,430...58,003,659 JBrowse link
G TBXT T-box transcription factor T ISO (MGI:MGI:1927252|PMID:11071760) MGI PMID:11071760 MGI:MGI:1927252 NCBI chr 6:164,112,117...164,122,253
Ensembl chr 6:169,095,723...169,106,595
JBrowse link
G TFAP2A transcription factor AP-2 alpha ISO (MGI:MGI:80519|PMID:8622766) UniProtKB PMID:8622766 MGI:MGI:80519 NCBI chr 6:10,237,834...10,260,843 JBrowse link
cartilage development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase ISO (MGI:MGI:3656462|PMID:15622513) MGI PMID:15622513 MGI:MGI:3656462 NCBI chr21:29,361,519...29,385,610 JBrowse link
G COL1A1 collagen type I alpha 1 chain ISO (MGI:MGI:3769669|PMID:18248096) MGI PMID:18248096 MGI:MGI:3769669 NCBI chr17:44,274,349...44,291,764
Ensembl chr17:49,150,677...49,166,677
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO (MGI:MGI:85592|PMID:9022054)
(MGI:MGI:3697977|PMID:11680679)
(MGI:MGI:84914|PMID:8989518)
mandibular condylar cartilage
MGI
RGD
PMID:8989518, PMID:9022054, PMID:11680679, PMID:12924823 MGI:MGI:3697977, MGI:MGI:84914, MGI:MGI:85592, RGD:8661659 NCBI chr12:40,726,137...40,757,690 JBrowse link
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4946896|PMID:21185280) MGI PMID:21185280 MGI:MGI:4946896 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G GHR growth hormone receptor ISO RGD PMID:15749813 RGD:2307373 NCBI chr 5:67,654,326...67,953,140
Ensembl chr 5:72,700,150...72,871,278
JBrowse link
G HOXA11 homeobox A11 ISO (MGI:MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:MGI:3043491 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103
JBrowse link
G HOXD11 homeobox D11 ISO (MGI:MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:MGI:3043491 NCBI chr2B:63,386,806...63,398,777 JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 ISO (MGI:MGI:1930356|PMID:10545953) MGI PMID:10545953 MGI:MGI:1930356 NCBI chr 1:21,014,951...21,129,937
Ensembl chr 1:21,979,504...22,053,400
JBrowse link
G SHOX2 short stature homeobox 2 ISO (MGI:MGI:3621617|PMID:16537395) MGI PMID:16537395 MGI:MGI:3621617 NCBI chr 3:155,138,969...155,149,619
Ensembl chr 3:163,190,284...163,199,239
JBrowse link
G SIK3 SIK family kinase 3 ISO (MGI:MGI:5316542|PMID:22318228) MGI PMID:22318228 MGI:MGI:5316542 NCBI chr11:111,680,884...111,932,424
Ensembl chr11:115,613,478...115,730,158
JBrowse link
G TRPV4 transient receptor potential cation channel subfamily V member 4 ISO (PMID:26249260) UniProtKB PMID:26249260 NCBI chr12:107,359,005...107,409,359
Ensembl chr12:110,754,238...110,786,182
JBrowse link
chondrocyte development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINH1 serpin family H member 1 ISO (MGI:MGI:5494537|PMID:22492985) MGI PMID:22492985 MGI:MGI:5494537 NCBI chr11:70,621,893...70,632,570 JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 ISO (MGI:MGI:5293259|PMID:21788370) MGI PMID:21788370 MGI:MGI:5293259 NCBI chr16:48,734,664...48,825,241
Ensembl chr16:68,131,905...68,142,871
JBrowse link
chondrocyte differentiation involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 ISO (MGI:MGI:4818263|PMID:19623616) MGI PMID:19623616 MGI:MGI:4818263 NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086
JBrowse link
G IHH Indian hedgehog signaling molecule ISO (MGI:MGI:5698232|PMID:25639508) MGI PMID:25639508 MGI:MGI:5698232 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506
JBrowse link
G SCUBE2 signal peptide, CUB domain and EGF like domain containing 2 ISO (MGI:MGI:5698232|PMID:25639508) MGI PMID:25639508 MGI:MGI:5698232 NCBI chr11:9,146,533...9,219,816
Ensembl chr11:8,888,668...8,959,677
JBrowse link
G SOX9 SRY-box transcription factor 9 ISO (PMID:20676705) UniProtKB PMID:20676705 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TRIP11 thyroid hormone receptor interactor 11 ISO (MGI:MGI:4822550|PMID:20089971) MGI PMID:20089971 MGI:MGI:4822550 NCBI chr14:72,601,649...72,675,784
Ensembl chr14:91,945,392...92,019,231
JBrowse link
coronal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR2 fibroblast growth factor receptor 2 ISO (MGI:MGI:3848571|PMID:19389359) MGI PMID:19389359 MGI:MGI:3848571 NCBI chr10:118,055,854...118,175,440
Ensembl chr10:121,469,735...121,588,815
JBrowse link
cranial suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (MGI:MGI:1203304|PMID:9477322) MGI PMID:9477322 MGI:MGI:1203304 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G FGF4 fibroblast growth factor 4 ISO (MGI:MGI:1203304|PMID:9477322) MGI PMID:9477322 MGI:MGI:1203304 NCBI chr11:64,866,649...64,871,031 JBrowse link
G IGF1 insulin like growth factor 1 ISO RGD PMID:10597685 RGD:12910129 NCBI chr12:99,986,887...100,066,773 JBrowse link
G INSIG1 insulin induced gene 1 ISO (MGI:MGI:3689278|PMID:16955138) MGI PMID:16955138 MGI:MGI:3689278 NCBI chr 7:146,893,730...146,906,329
Ensembl chr 7:158,619,531...158,632,012
JBrowse link
G INSIG2 insulin induced gene 2 ISO (MGI:MGI:3689278|PMID:16955138) MGI PMID:16955138 MGI:MGI:3689278 NCBI chr2B:5,046,971...5,068,757
Ensembl chr2B:118,632,402...118,652,647
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 ISO (MGI:MGI:3623529|PMID:16502419)
(MGI:MGI:3042355|PMID:15030764)
(MGI:MGI:2387743|PMID:12221714)
UniProtKB
MGI
PMID:12221714, PMID:15030764, PMID:16502419 MGI:MGI:2387743, MGI:MGI:3042355, MGI:MGI:3623529 NCBI chr 7:19,761,041...19,765,665 JBrowse link
craniofacial suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCANP1 dendritic cell associated nuclear protein ISO (PMID:23419067) CAFA PMID:23419067 NCBI chr 5:130,838,844...130,839,588
Ensembl chr 5:136,979,950...136,980,694
JBrowse link
G FOXN3 forkhead box N3 ISO (MGI:MGI:4835344|PMID:20691664) MGI PMID:20691664 MGI:MGI:4835344 NCBI chr14:69,778,191...70,238,813
Ensembl chr14:89,140,892...89,387,807
JBrowse link
G FREM1 FRAS1 related extracellular matrix 1 ISO (PMID:21931569) UniProtKB PMID:21931569 NCBI chr 9:14,567,781...14,748,474
Ensembl chr 9:15,081,208...15,253,399
JBrowse link
G MEGF8 multiple EGF like domains 8 ISO (PMID:23063620) UniProtKB PMID:23063620 NCBI chr19:39,213,339...39,265,391
Ensembl chr19:47,805,307...47,858,636
JBrowse link
G MMP14 matrix metallopeptidase 14 ISO (MGI:MGI:3771253|PMID:18022611) MGI PMID:18022611 MGI:MGI:3771253 NCBI chr14:3,654,125...3,665,158
Ensembl chr14:21,753,305...21,764,058
JBrowse link
G MMP16 matrix metallopeptidase 16 ISO (MGI:MGI:3771253|PMID:18022611) MGI PMID:18022611 MGI:MGI:3771253 NCBI chr 8:84,736,752...85,026,711
Ensembl chr 8:86,701,882...86,982,518
JBrowse link
G NEUROG1 neurogenin 1 ISO (PMID:23419067) CAFA PMID:23419067 NCBI chr 5:130,922,727...130,924,403
Ensembl chr 5:137,064,339...137,065,052
JBrowse link
G RAB23 RAB23, member RAS oncogene family ISO (PMID:17503333) UniProtKB PMID:17503333 NCBI chr 6:56,744,948...56,780,187
Ensembl chr 6:58,375,559...58,411,107
JBrowse link
G TIFAB TIFA inhibitor ISO (PMID:23419067) CAFA PMID:23419067 NCBI chr 5:130,836,697...130,846,050
Ensembl chr 5:136,983,040...136,983,525
JBrowse link
deltoid tuberosity development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (MGI:MGI:4418577|PMID:20059955) UniProtKB PMID:20059955 MGI:MGI:4418577 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G PITX2 paired like homeodomain 2 ISO (MGI:MGI:3794216|PMID:18312615)
(PMID:18312615)
BHF-UCL PMID:18312615 MGI:MGI:3794216 NCBI chr 4:103,112,624...103,137,356 JBrowse link
G SCX scleraxis bHLH transcription factor ISO (MGI:MGI:3715390|PMID:17567668), (MGI:MGI:4418577|PMID:20059955) UniProtKB PMID:17567668, PMID:20059955 MGI:MGI:3715390, MGI:MGI:4418577 NCBI chr 8:141,027,765...141,031,194 JBrowse link
endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARM1 coactivator associated arginine methyltransferase 1 ISO (MGI:MGI:4365886|PMID:19725955) MGI PMID:19725955 MGI:MGI:4365886 NCBI chr19:10,424,993...10,476,702
Ensembl chr19:11,144,733...11,195,948
JBrowse link
G DSPP dentin sialophosphoprotein ISO (MGI:MGI:6187806|PMID:26972716) MGI PMID:26972716 MGI:MGI:6187806 NCBI chr 4:79,903,923...79,909,836 JBrowse link
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:6199721|PMID:29545125), (MGI:MGI:6406739|PMID:21310272)
(MGI:MGI:6406739|PMID:21310272)
MGI PMID:21310272, PMID:29545125 MGI:MGI:6199721, MGI:MGI:6406739 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G EXT2 exostosin glycosyltransferase 2 ISO (MGI:MGI:6406739|PMID:21310272) MGI PMID:21310272 MGI:MGI:6406739 NCBI chr11:44,055,670...44,204,055
Ensembl chr11:44,522,797...44,699,447
JBrowse link
G SOX9 SRY-box transcription factor 9 ISO (MGI:MGI:2135696|PMID:11371614) MGI PMID:11371614 MGI:MGI:2135696 NCBI chr17:66,028,737...66,034,122 JBrowse link
endochondral ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALPL alkaline phosphatase, biomineralization associated ISO (MGI:MGI:5049900|PMID:20684022) MGI PMID:20684022 MGI:MGI:5049900 NCBI chr 1:20,702,509...20,772,301
Ensembl chr 1:21,667,732...21,736,688
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (MGI:MGI:4418577|PMID:20059955) UniProtKB PMID:20059955 MGI:MGI:4418577 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G BMP6 bone morphogenetic protein 6 ISO (MGI:MGI:1270957|PMID:9664685) MGI PMID:9664685 MGI:MGI:1270957 NCBI chr 6:7,564,164...7,720,341
Ensembl chr 6:7,848,249...8,000,649
JBrowse link
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 ISO (MGI:MGI:3799383|PMID:18539921) MGI PMID:18539921 MGI:MGI:3799383 NCBI chr 8:53,385,837...53,417,019
Ensembl chr 8:50,753,792...50,785,055
JBrowse link
G CBS cystathionine beta-synthase ISO (MGI:MGI:3656462|PMID:15622513) MGI PMID:15622513 MGI:MGI:3656462 NCBI chr21:29,361,519...29,385,610 JBrowse link
G COL10A1 collagen type X alpha 1 chain ISO RGD PMID:10853827 RGD:704421 NCBI chr 6:113,921,538...113,961,490
Ensembl chr 6:118,067,477...118,074,684
JBrowse link
G COL13A1 collagen type XIII alpha 1 chain ISO (PMID:11470398) UniProtKB PMID:11470398 NCBI chr10:66,277,302...66,434,410
Ensembl chr10:68,807,425...68,963,642
JBrowse link
G COL1A1 collagen type I alpha 1 chain ISO (MGI:MGI:64698|PMID:8130375) MGI PMID:8130375 MGI:MGI:64698 NCBI chr17:44,274,349...44,291,764
Ensembl chr17:49,150,677...49,166,677
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO (MGI:MGI:1334159|PMID:10100048) MGI PMID:10100048 MGI:MGI:1334159 NCBI chr12:40,726,137...40,757,690 JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO (MGI:MGI:4946456|PMID:21148564) MGI PMID:21148564 MGI:MGI:4946456 NCBI chr 8:18,626,998...18,980,416
Ensembl chr 8:15,576,416...15,904,123
JBrowse link
G DLX5 distal-less homeobox 5 ISO (MGI:MGI:4413604|PMID:19956613) UniProtKB PMID:19956613 MGI:MGI:4413604 NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186
JBrowse link
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4946896|PMID:21185280) MGI PMID:21185280 MGI:MGI:4946896 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G FGF18 fibroblast growth factor 18 ISO (MGI:MGI:3703411|PMID:17014841) MGI PMID:17014841 MGI:MGI:3703411 NCBI chr 5:166,765,061...166,802,277 JBrowse link
G FOXC1 forkhead box C1 ISO (MGI:MGI:5641778|PMID:25808752) UniProtKB PMID:25808752 MGI:MGI:5641778 NCBI chr 6:1,429,051...1,433,180 JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 ISO (MGI:MGI:1349497|PMID:10579729) MGI PMID:10579729 MGI:MGI:1349497 NCBI chr 1:21,014,951...21,129,937
Ensembl chr 1:21,979,504...22,053,400
JBrowse link
G IFT80 intraflagellar transport 80 ISO (MGI:MGI:5817320|PMID:26098911) MGI PMID:26098911 MGI:MGI:5817320 NCBI chr 3:157,279,076...157,421,478
Ensembl chr 3:165,329,056...165,454,905
JBrowse link
G INPPL1 inositol polyphosphate phosphatase like 1 ISO (PMID:23273569) UniProtKB PMID:23273569 NCBI chr11:67,302,066...67,317,785
Ensembl chr11:70,527,017...70,540,846
JBrowse link
G LOC100990650 guanine nucleotide-binding protein G(s) subunit alpha ISO (MGI:MGI:3619837|PMID:15797856) MGI PMID:15797856 MGI:MGI:3619837 NCBI chr20:55,190,607...55,262,245 JBrowse link
G MEF2C myocyte enhancer factor 2C ISO (MGI:MGI:3701381|PMID:17336904) MGI PMID:17336904 MGI:MGI:3701381 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G MEF2D myocyte enhancer factor 2D ISO (MGI:MGI:3701381|PMID:17336904) MGI PMID:17336904 MGI:MGI:3701381 NCBI chr 1:131,806,705...131,844,420
Ensembl chr 1:135,637,801...135,653,866
JBrowse link
G MMP13 matrix metallopeptidase 13 ISO (MGI:MGI:3771509|PMID:17987127) RGD
UniProtKB
PMID:10646117, PMID:17987127 MGI:MGI:3771509, RGD:10043159 NCBI chr11:97,890,811...97,902,778
Ensembl chr11:101,377,001...101,387,679
JBrowse link
G MMP14 matrix metallopeptidase 14 ISO (MGI:MGI:3771253|PMID:18022611) MGI PMID:18022611 MGI:MGI:3771253 NCBI chr14:3,654,125...3,665,158
Ensembl chr14:21,753,305...21,764,058
JBrowse link
G MMP16 matrix metallopeptidase 16 ISO (MGI:MGI:3771253|PMID:18022611) MGI PMID:18022611 MGI:MGI:3771253 NCBI chr 8:84,736,752...85,026,711
Ensembl chr 8:86,701,882...86,982,518
JBrowse link
G NAB1 NGFI-A binding protein 1 ISO (MGI:MGI:3583879|PMID:16136673) MGI PMID:16136673 MGI:MGI:3583879 NCBI chr2B:77,949,948...77,994,888
Ensembl chr2B:195,868,102...195,911,497
JBrowse link
G PEX7 peroxisomal biogenesis factor 7 ISO (MGI:MGI:3052413|PMID:12915479) MGI PMID:12915479 MGI:MGI:3052413 NCBI chr 6:134,582,933...134,675,388
Ensembl chr 6:138,672,179...138,762,830
JBrowse link
G PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 ISO (MGI:MGI:5049900|PMID:20684022) MGI PMID:20684022 MGI:MGI:5049900 NCBI chr17:8,373,032...8,381,410
Ensembl chr17:8,357,513...8,364,416
JBrowse link
G PTHLH parathyroid hormone like hormone ISO (MGI:MGI:1352921|PMID:8895385) MGI PMID:8895385 MGI:MGI:1352921 NCBI chr12:58,341,361...58,355,804
Ensembl chr12:60,960,071...60,973,750
JBrowse link
G RUNX2 RUNX family transcription factor 2 ISO (MGI:MGI:1332911|PMID:10072783) MGI PMID:10072783 MGI:MGI:1332911 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389
JBrowse link
G SCX scleraxis bHLH transcription factor ISO (MGI:MGI:4418577|PMID:20059955) UniProtKB PMID:20059955 MGI:MGI:4418577 NCBI chr 8:141,027,765...141,031,194 JBrowse link
G SIK3 SIK family kinase 3 ISO (MGI:MGI:5316542|PMID:22318228) MGI PMID:22318228 MGI:MGI:5316542 NCBI chr11:111,680,884...111,932,424
Ensembl chr11:115,613,478...115,730,158
JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 ISO (MGI:MGI:5582670|PMID:24505141)
(MGI:MGI:3715574|PMID:17591962)
(MGI:MGI:5293259|PMID:21788370)
MGI PMID:17591962, PMID:21788370, PMID:24505141 MGI:MGI:3715574, MGI:MGI:5293259, MGI:MGI:5582670 NCBI chr16:48,734,664...48,825,241
Ensembl chr16:68,131,905...68,142,871
JBrowse link
G TEK TEK receptor tyrosine kinase ISO RGD PMID:11735002 RGD:1601509 NCBI chr 9:26,955,339...27,077,809
Ensembl chr 9:27,561,421...27,683,572
JBrowse link
G TMEM119 transmembrane protein 119 ISO (MGI:MGI:5543589|PMID:22416756) ARUK-UCL PMID:22416756 MGI:MGI:5543589 NCBI chr12:106,166,737...106,173,965
Ensembl chr12:109,563,684...109,564,535
JBrowse link
frontal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 ISO (MGI:MGI:4821204|PMID:20570969) MGI PMID:20570969 MGI:MGI:4821204 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
G MSX2 msh homeobox 2 ISO (MGI:MGI:1355063|PMID:10742104) MGI PMID:10742104 MGI:MGI:1355063 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO RGD PMID:12416537 RGD:2302805 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:12416537 RGD:2302805 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041
JBrowse link
G TGFB3 transforming growth factor beta 3 ISO RGD PMID:12416537 RGD:2302805 NCBI chr14:56,516,697...56,542,097
Ensembl chr14:75,359,505...75,382,412
JBrowse link
growth plate cartilage axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STC1 stanniocalcin 1 ISO (PMID:16377640) UniProtKB PMID:16377640 NCBI chr 8:23,089,339...23,102,245
Ensembl chr 8:20,023,469...20,036,321
JBrowse link
growth plate cartilage chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL27A1 collagen type XXVII alpha 1 chain ISO (MGI:MGI:5315238|PMID:22206015) MGI PMID:22206015 MGI:MGI:5315238 NCBI chr 9:85,252,277...85,410,714
Ensembl chr 9:113,627,633...113,775,284
JBrowse link
G POC1A POC1 centriolar protein A ISO (MGI:MGI:5700251|PMID:26496357) MGI PMID:26496357 MGI:MGI:5700251 NCBI chr 3:52,016,372...52,096,073
Ensembl chr 3:53,245,162...53,324,579
JBrowse link
growth plate cartilage chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFT80 intraflagellar transport 80 ISO (MGI:MGI:5817320|PMID:26098911) MGI PMID:26098911 MGI:MGI:5817320 NCBI chr 3:157,279,076...157,421,478
Ensembl chr 3:165,329,056...165,454,905
JBrowse link
G NPPC natriuretic peptide C ISO (MGI:MGI:2177134|PMID:11259675) UniProtKB PMID:11259675 MGI:MGI:2177134 NCBI chr2B:119,148,774...119,153,381
Ensembl chr2B:237,936,939...237,941,244
JBrowse link
growth plate cartilage chondrocyte growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RARG retinoic acid receptor gamma ISO (MGI:MGI:3848572|PMID:19389355) UniProtKB PMID:19389355 MGI:MGI:3848572 NCBI chr12:35,521,276...35,542,814
Ensembl chr12:36,303,359...36,325,111
JBrowse link
G SOX9 SRY-box transcription factor 9 ISO (MGI:MGI:5317468|PMID:22421045) UniProt PMID:22421045 MGI:MGI:5317468 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO (MGI:MGI:4949016|PMID:21420963) MGI PMID:21420963 MGI:MGI:4949016 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856
JBrowse link
growth plate cartilage chondrocyte morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MATN1 matrilin 1 ISO (MGI:MGI:3655339|PMID:16877353) MGI PMID:16877353 MGI:MGI:3655339 NCBI chr 1:29,984,376...29,996,430
Ensembl chr 1:31,011,638...31,021,695
JBrowse link
growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CER1 cerberus 1, DAN family BMP antagonist ISO (PMID:19113921) BHF-UCL PMID:19113921 NCBI chr 9:14,552,062...14,559,632
Ensembl chr 9:15,063,766...15,066,776
JBrowse link
G NPPC natriuretic peptide C ISO (MGI:MGI:2177134|PMID:11259675) UniProtKB PMID:11259675 MGI:MGI:2177134 NCBI chr2B:119,148,774...119,153,381
Ensembl chr2B:237,936,939...237,941,244
JBrowse link
growth plate cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL2A1 collagen type II alpha 1 chain ISO spheno-occipital synchondrosis RGD PMID:20591638 RGD:8661256 NCBI chr12:40,726,137...40,757,690 JBrowse link
G COL9A1 collagen type IX alpha 1 chain ISO (MGI:MGI:3795666|PMID:18467703)
(MGI:MGI:3807836|PMID:18191556)
MGI PMID:18191556, PMID:18467703 MGI:MGI:3795666, MGI:MGI:3807836 NCBI chr 6:68,051,446...68,138,715
Ensembl chr 6:71,349,471...71,436,370
JBrowse link
G COMP cartilage oligomeric matrix protein ISO (MGI:MGI:3723532|PMID:17588960)
(MGI:MGI:3795666|PMID:18467703)
(MGI:MGI:3807836|PMID:18191556)
MGI PMID:17588960, PMID:18191556, PMID:18467703 MGI:MGI:3723532, MGI:MGI:3795666, MGI:MGI:3807836 NCBI chr19:18,222,270...18,230,936
Ensembl chr19:19,229,562...19,238,008
JBrowse link
G IFT80 intraflagellar transport 80 ISO (MGI:MGI:5817320|PMID:26098911) MGI PMID:26098911 MGI:MGI:5817320 NCBI chr 3:157,279,076...157,421,478
Ensembl chr 3:165,329,056...165,454,905
JBrowse link
G MMP13 matrix metallopeptidase 13 ISO (MGI:MGI:4949554|PMID:21444811) MGI PMID:21444811 MGI:MGI:4949554 NCBI chr11:97,890,811...97,902,778
Ensembl chr11:101,377,001...101,387,679
JBrowse link
G RARA retinoic acid receptor alpha ISO (MGI:MGI:3848572|PMID:19389355) MGI PMID:19389355 MGI:MGI:3848572 NCBI chr17:16,932,485...16,980,958 JBrowse link
G RARB retinoic acid receptor beta ISO (MGI:MGI:3848572|PMID:19389355) MGI PMID:19389355 MGI:MGI:3848572 NCBI chr 3:24,729,220...25,499,187
Ensembl chr 3:25,660,922...25,833,297
JBrowse link
G RARG retinoic acid receptor gamma ISO (MGI:MGI:3848572|PMID:19389355) MGI PMID:19389355 MGI:MGI:3848572 NCBI chr12:35,521,276...35,542,814
Ensembl chr12:36,303,359...36,325,111
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISO (MGI:MGI:4949016|PMID:21420963) MGI PMID:21420963 MGI:MGI:4949016 NCBI chr 3:30,536,187...30,623,653
Ensembl chr 3:30,854,460...30,938,856
JBrowse link
G THBS1 thrombospondin 1 ISO (MGI:MGI:3795666|PMID:18467703) MGI PMID:18467703 MGI:MGI:3795666 NCBI chr15:18,521,802...18,538,172
Ensembl chr15:36,776,756...36,793,170
JBrowse link
G THBS3 thrombospondin 3 ISO (MGI:MGI:3795666|PMID:18467703) MGI PMID:18467703 MGI:MGI:3795666 NCBI chr 1:130,540,486...130,553,534
Ensembl chr 1:134,148,468...134,160,245
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 ISO (MGI:MGI:2178865|PMID:11923874) MGI PMID:11923874 MGI:MGI:2178865 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747
JBrowse link
lambdoid suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 ISO (MGI:MGI:4821204|PMID:20570969) MGI PMID:20570969 MGI:MGI:4821204 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
megakaryocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI1 abl interactor 1 ISO (MGI:MGI:3847627|PMID:17664349) MGI PMID:17664349 MGI:MGI:3847627 NCBI chr10:26,863,648...26,975,376
Ensembl chr10:27,227,960...27,339,434
JBrowse link
G EP300 E1A binding protein p300 ISO (MGI:MGI:3812266|PMID:18684867) MGI PMID:18684867 MGI:MGI:3812266 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G FLI1 Fli-1 proto-oncogene, ETS transcription factor ISO (MGI:MGI:3808108|PMID:16757682) MGI PMID:16757682 MGI:MGI:3808108 NCBI chr11:123,506,859...123,626,024
Ensembl chr11:127,409,301...127,530,312
JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase ISO (MGI:MGI:3040777|PMID:15067126) UniProtKB PMID:15067126 MGI:MGI:3040777 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473
JBrowse link
G MED1 mediator complex subunit 1 ISO (MGI:MGI:2158098|PMID:11724781) BHF-UCL PMID:11724781 MGI:MGI:2158098 NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118
JBrowse link
G MEIS1 Meis homeobox 1 ISO (MGI:MGI:4948219|PMID:20203303) MGI PMID:20203303 MGI:MGI:4948219 NCBI chr2A:66,494,934...66,633,295
Ensembl chr2A:67,615,941...67,752,958
JBrowse link
G MPIG6B megakaryocyte and platelet inhibitory receptor G6b ISO (MGI:MGI:5512895|PMID:23112346) MGI PMID:23112346 MGI:MGI:5512895 NCBI chr 6:31,384,220...31,388,071
Ensembl chr 6:32,273,438...32,276,772
JBrowse link
G NBEAL2 neurobeachin like 2 ISO (MGI:MGI:5636146|PMID:25258341)
(MGI:MGI:5528579|PMID:23861251)
MGI PMID:23861251, PMID:25258341 MGI:MGI:5528579, MGI:MGI:5636146 NCBI chr 3:46,879,867...46,909,901
Ensembl chr 3:47,987,142...48,010,766
JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha ISO (MGI:MGI:3776733|PMID:16434494) UniProtKB PMID:16434494 MGI:MGI:3776733 NCBI chr10:22,691,355...22,870,628 JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 ISO (MGI:MGI:5494903|PMID:23509158) MGI PMID:23509158 MGI:MGI:5494903 NCBI chr12:110,016,364...110,107,462
Ensembl chr12:113,435,669...113,503,762
JBrowse link
G PTPN6 protein tyrosine phosphatase non-receptor type 6 ISO (MGI:MGI:5494903|PMID:23509158) MGI PMID:23509158 MGI:MGI:5494903 NCBI chr12:7,075,879...7,093,041
Ensembl chr12:6,991,099...7,008,830
JBrowse link
G SH2B3 SH2B adaptor protein 3 ISO (MGI:MGI:3510267|PMID:15337790) ARUK-UCL PMID:15337790 MGI:MGI:3510267 NCBI chr12:108,977,344...109,024,029 JBrowse link
G SRF serum response factor ISO (MGI:MGI:4834086|PMID:20525922)
(MGI:MGI:4848276|PMID:20709909)
MGI PMID:20525922, PMID:20709909 MGI:MGI:4834086, MGI:MGI:4848276 NCBI chr 6:42,763,099...42,773,332
Ensembl chr 6:44,057,192...44,066,768
JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO (MGI:MGI:3808106|PMID:16763211) MGI PMID:16763211 MGI:MGI:3808106 NCBI chr 1:46,524,484...46,540,595
Ensembl chr 1:48,042,594...48,048,622
JBrowse link
G TESC tescalcin NOT ISO (MGI:MGI:5315196|PMID:22285131) UniProtKB PMID:22285131 MGI:MGI:5315196 NCBI chr12:114,615,155...114,675,932
Ensembl chr12:117,991,047...118,051,346
JBrowse link
G THPO thrombopoietin ISO (PMID:15337790) ARUK-UCL PMID:15337790 NCBI chr 3:181,409,038...181,416,986
Ensembl chr 3:189,891,025...189,897,429
JBrowse link
G VPS33B VPS33B late endosome and lysosome associated ISO (MGI:MGI:5645581|PMID:25947942) UniProtKB PMID:25947942 MGI:MGI:5645581 NCBI chr15:69,691,717...69,715,617 JBrowse link
G WASF2 WASP family member 2 ISO (MGI:MGI:3847627|PMID:17664349) MGI PMID:17664349 MGI:MGI:3847627 NCBI chr 1:26,665,853...26,750,618
Ensembl chr 1:27,717,538...27,737,316
JBrowse link
G ZFPM1 zinc finger protein, FOG family member 1 ISO (MGI:MGI:4420713|PMID:20010697) MGI PMID:20010697 MGI:MGI:4420713 NCBI chr16:69,164,299...69,246,136 JBrowse link
G ZNF385A zinc finger protein 385A ISO (MGI:MGI:3505817|PMID:11927637) MGI PMID:11927637 MGI:MGI:3505817 NCBI chr12:34,353,975...34,376,172
Ensembl chr12:35,080,820...35,102,248
JBrowse link
mesenchymal cell differentiation involved in bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4834113|PMID:20404326) MGI PMID:20404326 MGI:MGI:4834113 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G RANBP3L RAN binding protein 3 like ISO (MGI:MGI:5883200|PMID:25755279) UniProtKB PMID:25755279 MGI:MGI:5883200 NCBI chr 5:74,061,669...74,115,154
Ensembl chr 5:79,343,218...79,396,121
JBrowse link
negative regulation of bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein ISO (MGI:MGI:6187806|PMID:26972716) MGI PMID:26972716 MGI:MGI:6187806 NCBI chr 4:79,903,923...79,909,836 JBrowse link
G RGN regucalcin ISO RGD PMID:11129957, PMID:12239582 RGD:9590179, RGD:9681003 NCBI chr  X:39,513,135...39,530,188
Ensembl chr  X:47,371,226...47,388,881
JBrowse link
negative regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GREM1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) BHF-UCL PMID:15539560 NCBI chr15:11,213,870...11,230,619 JBrowse link
G PTH parathyroid hormone ISO PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr11:13,653,777...13,657,901
Ensembl chr11:13,347,838...13,351,802
JBrowse link
G RFLNA refilin A ISO (MGI:MGI:5570967|PMID:24436304) MGI PMID:24436304 MGI:MGI:5570967 NCBI chr12:121,737,946...121,903,635
Ensembl chr12:126,164,592...126,191,071
JBrowse link
G RFLNB refilin B ISO (MGI:MGI:5570967|PMID:24436304) MGI PMID:24436304 MGI:MGI:5570967 NCBI chr17:359,016...367,464
Ensembl chr17:375,885...381,580
JBrowse link
negative regulation of growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein ISO (MGI:MGI:6187806|PMID:26972716) MGI PMID:26972716 MGI:MGI:6187806 NCBI chr 4:79,903,923...79,909,836 JBrowse link
negative regulation of osteoclast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN18 claudin 18 ISO (MGI:MGI:5489769|PMID:22437732) MGI PMID:22437732 MGI:MGI:5489769 NCBI chr 3:135,037,555...135,061,105
Ensembl chr 3:142,478,031...142,512,548
JBrowse link
G FBN1 fibrillin 1 ISO (PMID:24039232)
(MGI:MGI:5795811|PMID:24039232)
UniProtKB PMID:24039232 MGI:MGI:5795811 NCBI chr15:27,358,780...27,593,539
Ensembl chr15:45,682,450...45,918,111
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 ISO (PMID:29149593)
(MGI:MGI:6106664|PMID:29149593)
UniProtKB PMID:29149593 MGI:MGI:6106664 NCBI chr 4:144,660,676...144,874,404
Ensembl chr 4:156,312,274...156,402,351
JBrowse link
G TJP2 tight junction protein 2 ISO (MGI:MGI:5489769|PMID:22437732) MGI PMID:22437732 MGI:MGI:5489769 NCBI chr 9:55,536,627...55,690,472 JBrowse link
ossification involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCHS1 dachsous cadherin-related 1 ISO (MGI:MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:MGI:4939936 NCBI chr11:6,753,383...6,787,896
Ensembl chr11:6,436,536...6,456,352
JBrowse link
G FAT4 FAT atypical cadherin 4 ISO (MGI:MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:MGI:4939936 NCBI chr 4:117,494,842...117,674,382
Ensembl chr 4:128,637,516...128,814,407
JBrowse link
G PLXNB1 plexin B1 ISO (MGI:MGI:5297297|PMID:22019888) BHF-UCL PMID:22019888 MGI:MGI:5297297 NCBI chr 3:48,325,892...48,352,128
Ensembl chr 3:49,408,666...49,434,913
JBrowse link
G RHOA ras homolog family member A ISO (MGI:MGI:5297297|PMID:22019888) BHF-UCL PMID:22019888 MGI:MGI:5297297 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G RYR1 ryanodine receptor 1 ISO (MGI:MGI:3764002|PMID:18003898) UniProtKB PMID:18003898 MGI:MGI:3764002 NCBI chr19:35,527,466...35,685,446
Ensembl chr19:44,106,036...44,256,327
JBrowse link
G SEMA4D semaphorin 4D ISO (PMID:22019888)
(MGI:MGI:5297297|PMID:22019888)
BHF-UCL PMID:22019888 MGI:MGI:5297297 NCBI chr 9:60,451,420...60,588,519
Ensembl chr 9:88,497,528...88,560,811
JBrowse link
G THBS3 thrombospondin 3 ISO (MGI:MGI:3581317|PMID:15964815) MGI PMID:15964815 MGI:MGI:3581317 NCBI chr 1:130,540,486...130,553,534
Ensembl chr 1:134,148,468...134,160,245
JBrowse link
G XYLT1 xylosyltransferase 1 ISO (MGI:MGI:5544658|PMID:24161523) UniProtKB PMID:24161523 MGI:MGI:5544658 NCBI chr16:20,078,904...20,447,268
Ensembl chr16:17,222,447...17,470,818
JBrowse link
osteoclast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:7961821) UniProtKB PMID:7961821 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G FOXP1 forkhead box P1 ISO (PMID:18799727) UniProtKB PMID:18799727 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173
JBrowse link
G LRRK1 leucine rich repeat kinase 1 ISO (MGI:MGI:5564766|PMID:23526378) MGI PMID:23526378 MGI:MGI:5564766 NCBI chr15:79,642,908...79,793,990
Ensembl chr15:98,931,344...99,081,168
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO (MGI:MGI:5308511|PMID:22073305) MGI PMID:22073305 MGI:MGI:5308511 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO (MGI:MGI:5564766|PMID:23526378) MGI PMID:23526378 MGI:MGI:5564766 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634
JBrowse link
G TNFSF11 TNF superfamily member 11 ISO (MGI:MGI:5297759|PMID:21841309) MGI PMID:21841309 MGI:MGI:5297759 NCBI chr13:23,750,835...23,784,740 JBrowse link
osteoclast maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM20C FAM20C golgi associated secretory pathway kinase ISO (MGI:MGI:5427766|PMID:22615579) MGI PMID:22615579 MGI:MGI:5427766 NCBI chr 7:311,468...394,623 JBrowse link
perichondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:6407539|PMID:28768899) MGI PMID:28768899 MGI:MGI:6407539 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
positive regulation of bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide ISO RGD PMID:12960077 RGD:12905040 NCBI chr 3:10,221,829...10,229,229
Ensembl chr 3:10,573,537...10,580,723
JBrowse link
G TMEM119 transmembrane protein 119 ISO (MGI:MGI:5700277|PMID:26207632) UniProtKB PMID:26207632 MGI:MGI:5700277 NCBI chr12:106,166,737...106,173,965
Ensembl chr12:109,563,684...109,564,535
JBrowse link
positive regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 ISO (MGI:MGI:5291888|PMID:21784188) UniProtKB PMID:21784188 MGI:MGI:5291888 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429
JBrowse link
G ASXL2 ASXL transcriptional regulator 2 ISO (MGI:MGI:5514358|PMID:21490954) MGI PMID:21490954 MGI:MGI:5514358 NCBI chr2A:25,730,155...25,880,089 JBrowse link
positive regulation of osteoclast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP1 ATPase H+ transporting accessory protein 1 ISO (MGI:MGI:5575464|PMID:22467241) UniProtKB PMID:22467241 MGI:MGI:5575464 NCBI chr  X:143,870,421...143,878,288
Ensembl chr  X:153,740,751...153,748,621
JBrowse link
G GPR68 G protein-coupled receptor 68 ISO (MGI:MGI:3848292|PMID:19479052) MGI PMID:19479052 MGI:MGI:3848292 NCBI chr14:71,859,025...71,891,126
Ensembl chr14:91,207,679...91,208,806
JBrowse link
G SLC9B2 solute carrier family 9 member B2 ISO (MGI:MGI:3785147|PMID:18269914) MGI PMID:18269914 MGI:MGI:3785147 NCBI chr 4:95,474,854...95,532,311
Ensembl chr 4:106,100,229...106,155,749
JBrowse link
G TNFSF11 TNF superfamily member 11 ISO (MGI:MGI:3785147|PMID:18269914), (MGI:MGI:5489769|PMID:22437732), (MGI:MGI:5522615|PMID:23980096) MGI PMID:18269914, PMID:22437732, PMID:23980096 MGI:MGI:3785147, MGI:MGI:5489769, MGI:MGI:5522615 NCBI chr13:23,750,835...23,784,740 JBrowse link
G TYROBP transmembrane immune signaling adaptor TYROBP ISO (MGI:MGI:3653295|PMID:14969392) UniProt PMID:14969392 MGI:MGI:3653295 NCBI chr19:32,821,279...32,825,488
Ensembl chr19:41,570,683...41,575,226
JBrowse link
regulation of bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 ISO (MGI:MGI:5439039|PMID:22841643) MGI PMID:22841643 MGI:MGI:5439039 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link
G KAT2A lysine acetyltransferase 2A ISO (MGI:MGI:6377983|PMID:30424580) UniProt PMID:30424580 MGI:MGI:6377983 NCBI chr17:15,194,414...15,202,818
Ensembl chr17:15,416,075...15,424,197
JBrowse link
G KDR kinase insert domain receptor ISO (MGI:MGI:5461755|PMID:22886301) MGI PMID:22886301 MGI:MGI:5461755 NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109
JBrowse link
G LOX lysyl oxidase ISO (MGI:MGI:5293278|PMID:21665949) MGI PMID:21665949 MGI:MGI:5293278 NCBI chr 5:117,450,833...117,464,957
Ensembl chr 5:123,234,662...123,248,717
JBrowse link
regulation of growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARM1 coactivator associated arginine methyltransferase 1 ISO (MGI:MGI:4365886|PMID:19725955) MGI PMID:19725955 MGI:MGI:4365886 NCBI chr19:10,424,993...10,476,702
Ensembl chr19:11,144,733...11,195,948
JBrowse link
G LOC100990437 NADPH--cytochrome P450 reductase ISO positive regulation RGD PMID:19264869 RGD:2316785 NCBI chr 7:68,035,021...68,105,934
Ensembl chr 7:82,364,418...82,437,530
JBrowse link
regulation of osteoclast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOTCH2 notch receptor 2 ISO (PMID:29149593) UniProtKB PMID:29149593 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
JBrowse link
G SIGLEC15 sialic acid binding Ig like lectin 15 ISO (MGI:MGI:5467208|PMID:22451653) MGI PMID:22451653 MGI:MGI:5467208 NCBI chr18:39,111,697...39,125,631
Ensembl chr18:42,658,534...42,663,773
JBrowse link
G TYROBP transmembrane immune signaling adaptor TYROBP ISO (MGI:MGI:5467208|PMID:22451653) MGI PMID:22451653 MGI:MGI:5467208 NCBI chr19:32,821,279...32,825,488
Ensembl chr19:41,570,683...41,575,226
JBrowse link
sagittal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI3 GLI family zinc finger 3 ISO (MGI:MGI:4821204|PMID:20570969) MGI PMID:20570969 MGI:MGI:4821204 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12529
    developmental process 5818
      anatomical structure development 5431
        animal organ development 3609
          bone development 237
            baculum development 1
            bone cell development + 37
            bone marrow development 8
            bone maturation + 25
            bone morphogenesis + 108
            deltoid tuberosity development 3
            mesenchymal cell differentiation involved in bone development 2
            negative regulation of bone development + 10
            positive regulation of bone development + 9
            regulation of bone development + 27
Path 2
Term Annotations click to browse term
  biological_process 12529
    developmental process 5818
      anatomical structure development 5431
        multicellular organism development 4970
          system development 4675
            animal organ development 3609
              bone development 237
                baculum development 1
                bone cell development + 37
                bone marrow development 8
                bone maturation + 25
                bone morphogenesis + 108
                deltoid tuberosity development 3
                mesenchymal cell differentiation involved in bone development 2
                negative regulation of bone development + 10
                positive regulation of bone development + 9
                regulation of bone development + 27
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.