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ONTOLOGY REPORT - ANNOTATIONS

Term:heart trabecula formation
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Accession:GO:0060347 term browser browse the term
Definition:The process of creating a trabecula in the heart. A trabecula is a tissue element in the form of a small beam, strut or rod.
Synonyms:exact_synonym: cardiac trabecula formation;   cardiac trabeculation;   heart trabeculation
 related_synonym: heart trabecula biogenesis

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heart trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18267097) Ensembl
MGI		 PMID:18267097 GO_REF:0000107 NCBI chr 2:65,376,288...65,385,398
Ensembl chr 2:65,376,310...65,385,918 		JBrowse link
G ADGRG6 adhesion G protein-coupled receptor G6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:30,810,167...30,951,082
Ensembl chr13:30,809,634...30,950,767 		JBrowse link
G BMP10 bone morphogenetic protein 10 involved_in ISO (MGI:3040529|PMID:15073151) BHF-UCL PMID:15073151 MGI:3040529 NCBI chr14:38,253,093...38,260,027
Ensembl chr14:38,253,890...38,259,621 		JBrowse link
G CAV3 caveolin 3 acts_upstream_of_or_within ISO (PMID:19535499) MGI PMID:19535499 NCBI chr22:44,726,597...44,740,456
Ensembl chr22:44,727,624...44,740,459 		JBrowse link
G EGLN1 egl-9 family hypoxia inducible factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16966370) Ensembl
MGI		 PMID:16966370 GO_REF:0000107 NCBI chr25:68,624,754...68,685,961
Ensembl chr25:68,625,260...68,682,804 		JBrowse link
G FHL2 four and a half LIM domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:8,992,881...9,069,432
Ensembl chr14:8,990,861...9,069,227 		JBrowse link
G FKBP1A FKBP prolyl isomerase 1A involved_in ISO (MGI:1195585|PMID:9461216) BHF-UCL PMID:9461216 MGI:1195585 NCBI chr 2:55,170,816...55,195,380 JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:47,965,808...47,977,435
Ensembl chr13:47,964,847...47,977,346 		JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16510504) Ensembl
MGI		 PMID:16510504 GO_REF:0000107 NCBI chr23:75,391,833...75,399,003
Ensembl chr23:75,391,847...75,395,205 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17573777) Ensembl
MGI		 PMID:17573777 GO_REF:0000107 NCBI chr 2:47,082,294...47,118,880
Ensembl chr 2:47,082,167...47,117,521 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (MGI:2655947|PMID:12663486) BHF-UCL PMID:12663486 MGI:2655947 NCBI chr 9:86,831,042...86,840,668
Ensembl chr 9:86,830,957...86,840,250 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:18267097) MGI PMID:18267097 NCBI chr 6:9,943,162...10,044,476 JBrowse link
G SRF serum response factor acts_upstream_of_or_within ISO (PMID:15569937) MGI PMID:15569937 NCBI chr17:28,983,161...28,993,465
Ensembl chr17:28,983,002...28,992,995 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in ISO (MGI:2663364|PMID:12773577) BHF-UCL PMID:12773577 MGI:2663364 NCBI chr20:41,353,182...41,565,357
Ensembl chr20:41,353,325...41,565,343 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16916
    developmental process 6658
      anatomical structure formation involved in morphogenesis 1282
        trabecula formation 31
          heart trabecula formation 14
Path 2
Term Annotations click to browse term
  biological_process 16916
    developmental process 6658
      anatomical structure development 6257
        multicellular organism development 5043
          system development 4376
            circulatory system development 1258
              heart development 716
                cardiac chamber development 193
                  cardiac chamber morphogenesis 140
                    heart trabecula formation 14
paths to the root