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ONTOLOGY REPORT - ANNOTATIONS


Term:face morphogenesis
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Accession:GO:0060325 term browser browse the term
Definition:The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head.


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face morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD11 ankyrin repeat domain 11 acts_upstream_of_or_within ISO (PMID:21782149) MGI PMID:21782149 NCBI chr 5:64,047,188...64,229,582
Ensembl chr 5:64,047,175...64,229,077
JBrowse link
G ARID5B AT-rich interaction domain 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3696608|PMID:17143286) Ensembl
MGI
PMID:17143286 GO_REF:0000107 MGI:3696608 NCBI chr 4:13,926,759...14,105,069
Ensembl chr 4:13,927,217...14,101,364
JBrowse link
G ASPH aspartate beta-hydroxylase acts_upstream_of_or_within ISO (MGI:2177999|PMID:11773073) MGI PMID:11773073 MGI:2177999 NCBI chr29:11,812,275...12,022,755
Ensembl chr29:11,814,554...12,022,680
JBrowse link
G B9D2 B9 domain containing 2 acts_upstream_of_or_within ISO (PMID:18498113) UniProt PMID:18498113 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G CDK2AP1 cyclin dependent kinase 2 associated protein 1 acts_upstream_of_or_within ISO (MGI:3837115|PMID:19229340) MGI PMID:19229340 MGI:3837115 NCBI chr26:6,283,071...6,293,595
Ensembl chr17:52,363,464...52,363,811
Ensembl chr26:52,363,464...52,363,811
JBrowse link
G COL1A1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO (MGI:3710444|PMID:17440987) MGI PMID:17440987 MGI:3710444 NCBI chr 9:26,183,852...26,199,927
Ensembl chr 9:26,183,852...26,199,927
JBrowse link
G CREBBP CREB binding protein involved_in ISO (MGI:4421646|PMID:19822209) ARUK-UCL PMID:19822209 MGI:4421646 NCBI chr 6:37,410,201...37,536,688
Ensembl chr 6:37,409,930...37,534,176
JBrowse link
G CRISPLD1 cysteine rich secretory protein LCCL domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:23,353,872...23,397,768
Ensembl chr29:23,350,781...23,396,682
JBrowse link
G CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:67,643,225...67,707,438
Ensembl chr 5:67,645,179...67,692,122
JBrowse link
G CSRNP1 cysteine and serine rich nuclear protein 1 acts_upstream_of_or_within ISO (MGI:3696608|PMID:17143286) MGI PMID:17143286 MGI:3696608 NCBI chr23:8,815,848...8,829,062
Ensembl chr23:8,817,053...8,822,979
JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (MGI:3722225|PMID:17699607) MGI PMID:17699607 MGI:3722225 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496
JBrowse link
G DLX5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611627|PMID:16330189) Ensembl
MGI
PMID:16330189 GO_REF:0000107 MGI:3611627 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867
JBrowse link
G KAT6A lysine acetyltransferase 6A acts_upstream_of_or_within ISO (MGI:5442217|PMID:22921202) MGI PMID:22921202 MGI:5442217 NCBI chr16:23,604,629...23,717,047
Ensembl chr16:23,604,200...23,724,252
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (MGI:3722225|PMID:17699607) MGI PMID:17699607 MGI:3722225 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019
JBrowse link
G LRP6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4413396|PMID:19653321)
(MGI:4358010|PMID:19700620)
GO_Central
MGI
PMID:19653321 PMID:19700620 PMID:21873635 MGI:4358010 MGI:4413396 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MMP2 matrix metallopeptidase 2 acts_upstream_of_or_within ISO (MGI:3710444|PMID:17440987) MGI PMID:17440987 MGI:3710444 NCBI chr 2:60,471,092...60,492,991
Ensembl chr 2:60,471,257...60,494,113
JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO (MGI:4453942|PMID:20123092)
(MGI:3688967|PMID:11369996)
(PMID:10742093), (PMID:11332647), (PMID:12651933)
(MGI:3611627|PMID:16330189)
MGI
BHF-UCL
PMID:10742093 PMID:11332647 PMID:11369996 PMID:12651933 PMID:16330189 PMID:20123092 MGI:3611627 MGI:3688967 MGI:4453942 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852
JBrowse link
G NOG noggin acts_upstream_of_or_within ISO (MGI:3640733|PMID:16712836) MGI PMID:16712836 MGI:3640733 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G PAX9 paired box 9 acts_upstream_of_or_within ISO (MGI:4453942|PMID:20123092) MGI PMID:20123092 MGI:4453942 NCBI chr 8:15,221,852...15,239,629
Ensembl chr 8:15,221,730...15,239,099
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3696608|PMID:17143286) Ensembl
MGI
PMID:17143286 GO_REF:0000107 MGI:3696608 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278
JBrowse link
G PLEKHA1 pleckstrin homology domain containing A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3696608|PMID:17143286) Ensembl
MGI
PMID:17143286 GO_REF:0000107 MGI:3696608 NCBI chr28:32,025,791...32,081,824
Ensembl chr28:32,026,350...32,081,835
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:20512159) BHF-UCL PMID:20512159 NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501
JBrowse link
G RRAS RAS related involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,895,413...106,899,265
Ensembl chr 1:106,895,408...106,899,222
JBrowse link
G SCX scleraxis bHLH transcription factor acts_upstream_of_or_within ISO (PMID:18498113) UniProt PMID:18498113 NCBI chr13:37,701,781...37,704,949
Ensembl chr13:37,703,232...37,704,657
JBrowse link
G SGPL1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO (MGI:3696608|PMID:17143286) MGI PMID:17143286 MGI:3696608 NCBI chr 4:21,666,264...21,717,476
Ensembl chr 4:21,660,939...21,715,155
JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:1095997|PMID:9284043), (MGI:2176418|PMID:11731796) MGI PMID:9284043 PMID:11731796 MGI:1095997 MGI:2176418 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) DFLAT PMID:17273977 NCBI chr30:37,331,834...37,359,449
Ensembl chr30:37,331,832...37,353,529
JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:4822099|PMID:20501333) MGI PMID:20501333 MGI:4822099 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784
JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:3722225|PMID:17699607) MGI PMID:17699607 MGI:3722225 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1313057|PMID:9811866) MGI PMID:9811866 MGI:1313057 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270
JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:18498113) UniProt PMID:18498113 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242
JBrowse link
G TGFB3 transforming growth factor beta 3 involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:18498113) AgBase
UniProt
PMID:18498113 GO_REF:0000024 NCBI chr 8:48,920,874...48,946,037
Ensembl chr 8:48,923,423...48,945,816
JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO (MGI:3696608|PMID:17143286) MGI PMID:17143286 MGI:3696608 NCBI chr23:50,253,645...50,279,615
Ensembl chr23:50,249,327...50,280,144
JBrowse link
G TWIST2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:4939992|PMID:20691403), (MGI:4949824|PMID:20574024) MGI PMID:20574024 PMID:20691403 MGI:4939992 MGI:4949824 NCBI chr25:49,165,450...49,216,545
Ensembl chr25:49,165,641...49,166,123
JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B involved_in ISO (MGI:4421646|PMID:19822209) ARUK-UCL PMID:19822209 MGI:4421646 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13868
    developmental process 6134
      anatomical structure morphogenesis 2708
        face morphogenesis 37
Path 2
Term Annotations click to browse term
  biological_process 13868
    developmental process 6134
      anatomical structure development 5705
        anatomical structure morphogenesis 2708
          body morphogenesis 59
            head morphogenesis 43
              face morphogenesis 37
paths to the root