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ONTOLOGY REPORT - ANNOTATIONS


Term:limb bud formation
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Accession:GO:0060174 term browser browse the term
Definition:The process pertaining to the initial formation of a limb bud from unspecified parts. This process begins with the formation of a local condensation of mesenchyme cells within the prospective limb field, and ends when a limb bud is recognizable.
Synonyms:exact_synonym: limb formation;   limbbud formation



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limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain involved_in ISO
IEA
(MGI:5285147|PMID:20940257)
GO_REF:0000107
RGD
Ensembl
PMID:20940257 GO_REF:0000107 MGI:5285147 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1927833 (MGI:1309706|PMID:9784490) RGD PMID:9784490 MGI:1309706 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790|MGI:2153799 (MGI:1197797|PMID:9435295), (MGI:1346744|PMID:10518547) RGD PMID:9435295 PMID:10518547 MGI:1197797 MGI:1346744 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Plxna2 plexin A2 involved_in ISO (MGI:4355631|PMID:19666519) RGD PMID:19666519 MGI:4355631 NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979
JBrowse link
G Sema3c semaphorin 3C involved_in ISO (MGI:4355631|PMID:19666519) RGD PMID:19666519 MGI:4355631 NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1928592|PMID:11118883)
Ensembl
RGD
PMID:11118883 GO_REF:0000107 MGI:1928592 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:5285147|PMID:20940257) RGD PMID:20940257 MGI:5285147 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Wnt3 Wnt family member 3 involved_in ISO (PMID:14872406) RGD PMID:14872406 NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
JBrowse link
G Zfp219 zinc finger protein 219 involved_in ISO (MGI:5285147|PMID:20940257) RGD PMID:20940257 MGI:5285147 NCBI chr15:24,695,831...24,710,039
Ensembl chr15:24,695,837...24,710,030
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20350
    developmental process 7023
      anatomical structure formation involved in morphogenesis 1373
        limb bud formation 9
          mesenchyme migration involved in limb bud formation + 0
Path 2
Term Annotations click to browse term
  biological_process 20350
    developmental process 7023
      anatomical structure development 6530
        multicellular organism development 5248
          appendage development 217
            limb development 217
              limb morphogenesis 182
                limb bud formation 9
                  mesenchyme migration involved in limb bud formation + 0
paths to the root