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ONTOLOGY REPORT - ANNOTATIONS


Term:limb development
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Accession:GO:0060173 term browser browse the term
Definition:The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.
Synonyms:exact_synonym: paired limb/fin development
 narrow_synonym: limb bud development
 xref: Wikipedia:Limb_development


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limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5499270|PMID:23610558) MGI
Ensembl
PMID:23610558 GO_REF:0000107 MGI:5499270 NCBI chrNW_004936517:428,689...531,360
Ensembl chrNW_004936517:429,292...531,361
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5439233|PMID:22867887) MGI
Ensembl
PMID:22867887 GO_REF:0000107 MGI:5439233 NCBI chrNW_004936646:1,770,412...1,777,152
Ensembl chrNW_004936646:1,770,930...1,777,173
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5314314|PMID:22228099) MGI
Ensembl
PMID:22228099 GO_REF:0000107 MGI:5314314 NCBI chrNW_004936662:1,081,237...1,116,719
Ensembl chrNW_004936662:1,080,295...1,116,636
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5499270|PMID:23610558) MGI
Ensembl
PMID:23610558 GO_REF:0000107 MGI:5499270 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:12,381,225...12,505,121
Ensembl chrNW_004936496:12,381,126...12,505,150
JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5550565|PMID:22006726)
(MGI:3723532|PMID:17588960)
MGI
Ensembl
PMID:17588960 PMID:22006726 GO_REF:0000107 MGI:3723532 MGI:5550565 NCBI chrNW_004936596:2,544,389...2,551,155
Ensembl chrNW_004936596:2,544,389...2,551,164
JBrowse link
G Cplane2 ciliogenesis and planar polarity effector complex subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6107986|PMID:29038301) MGI
Ensembl
PMID:29038301 GO_REF:0000107 MGI:6107986 NCBI chrNW_004936474:3,725,871...3,730,634
Ensembl chrNW_004936474:3,725,865...3,730,677
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2450015|PMID:12569130) MGI
Ensembl
PMID:12569130 GO_REF:0000107 MGI:2450015 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Dmd dystrophin acts_upstream_of_or_within ISO (MGI:5515277|PMID:23798567) MGI PMID:23798567 MGI:5515277 NCBI chrNW_004936553:7,157,526...7,943,703 JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO (MGI:5502252|PMID:23863478) MGI PMID:23863478 MGI:5502252 NCBI chrNW_004936469:51,439,944...51,451,194 JBrowse link
G Fbxw4 F-box and WD repeat domain containing 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1278141|PMID:9733575), (MGI:76752|PMID:8666395)
(MGI:76752|PMID:8666395)
MGI
Ensembl
PMID:8666395 PMID:9733575 GO_REF:0000107 MGI:1278141 MGI:76752 NCBI chrNW_004936600:4,072,749...4,162,220
Ensembl chrNW_004936600:4,073,384...4,161,588
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,927,817...2,008,268
Ensembl chrNW_004936697:1,927,812...2,008,268
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1855908|PMID:10804187) MGI
Ensembl
PMID:10804187 GO_REF:0000107 MGI:1855908 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:56546|PMID:2997621) MGI
Ensembl
PMID:2997621 GO_REF:0000107 MGI:56546 NCBI chrNW_004936673:1,424,513...1,838,277
Ensembl chrNW_004936673:1,432,927...1,719,966
JBrowse link
G Gli3 GLI family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chrNW_004936602:908,034...956,634
Ensembl chrNW_004936602:905,486...956,521
JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828200|PMID:18930042)
(MGI:4420527|PMID:19521792)
(MGI:5285455|PMID:21653639)
MGI
Ensembl
PMID:18930042 PMID:19521792 PMID:21653639 GO_REF:0000107 MGI:3828200 MGI:4420527 MGI:5285455 NCBI chrNW_004936493:5,108,437...5,145,160
Ensembl chrNW_004936493:5,108,437...5,145,160
JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5817320|PMID:26098911) MGI
Ensembl
PMID:26098911 GO_REF:0000107 MGI:5817320 NCBI chrNW_004936708:238,302...362,537
Ensembl chrNW_004936708:238,268...362,519
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:5314314|PMID:22228099) MGI PMID:22228099 MGI:5314314 NCBI chrNW_004936720:1,041,216...1,168,725
Ensembl chrNW_004936720:1,041,211...1,168,748
JBrowse link
G Intu inturned planar cell polarity protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936642:2,950,197...3,025,079
Ensembl chrNW_004936642:2,921,852...3,025,083
JBrowse link
G Irf6 interferon regulatory factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3691407|PMID:17041601) MGI
Ensembl
PMID:17041601 GO_REF:0000107 MGI:3691407 NCBI chrNW_004936557:3,292,927...3,309,002
Ensembl chrNW_004936557:3,292,873...3,311,369
JBrowse link
G Kremen1 kringle containing transmembrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:3,155,564...3,206,385
Ensembl chrNW_004936657:3,155,958...3,202,658
JBrowse link
G Kremen2 kringle containing transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,201,008...1,205,593
Ensembl chrNW_004936694:1,201,812...1,205,246
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (MGI:5515277|PMID:23798567) MGI PMID:23798567 MGI:5515277 NCBI chrNW_004936492:6,160,979...6,657,491
Ensembl chrNW_004936492:6,289,517...6,659,465
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,211,519...2,262,899
Ensembl chrNW_004936562:2,211,514...2,263,937
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:69439|PMID:7957077) MGI
Ensembl
PMID:7957077 GO_REF:0000107 MGI:69439 NCBI chrNW_004936509:3,029,942...3,203,319
Ensembl chrNW_004936509:3,029,979...3,202,796
JBrowse link
G Med31 mediator complex subunit 31 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4459000|PMID:20347762) MGI
Ensembl
PMID:20347762 GO_REF:0000107 MGI:4459000 NCBI chrNW_004936677:1,345,448...1,352,155
Ensembl chrNW_004936677:1,345,456...1,351,176
JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1340181|PMID:10403250) MGI
Ensembl
PMID:10403250 GO_REF:0000107 MGI:1340181 NCBI chrNW_004936546:2,239,442...2,304,099
Ensembl chrNW_004936546:2,239,442...2,304,099
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5439233|PMID:22867887) MGI
Ensembl
PMID:22867887 GO_REF:0000107 MGI:5439233 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521
JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,779,398...3,798,074
Ensembl chrNW_004936524:3,779,392...3,798,501
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:9441675 RGD:2302426 NCBI chrNW_004936523:1,492,795...1,786,942
Ensembl chrNW_004936523:1,493,450...1,750,524
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255
JBrowse link
G Rara retinoic acid receptor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:69060|PMID:7607067) MGI
Ensembl
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611
JBrowse link
G Rarg retinoic acid receptor gamma acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:69060|PMID:7607067) MGI
Ensembl
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chrNW_004936512:10,502,954...10,524,796
Ensembl chrNW_004936512:10,500,622...10,524,824
JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:61293|PMID:13970082) MGI
Ensembl
PMID:13970082 GO_REF:0000107 MGI:61293 NCBI chrNW_004936497:5,451,055...5,457,334
Ensembl chrNW_004936497:5,452,800...5,456,905
JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486592|PMID:23583643) MGI
Ensembl
PMID:23583643 GO_REF:0000107 MGI:5486592 NCBI chrNW_004936487:11,341,663...11,393,275
Ensembl chrNW_004936487:11,341,700...11,389,859
JBrowse link
G Rspo2 R-spondin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:36,680,716...36,815,347
Ensembl chrNW_004936470:36,681,506...36,814,626
JBrowse link
G Sall1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3841513|PMID:19223390) MGI
Ensembl
PMID:19223390 GO_REF:0000107 MGI:3841513 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Slc39a1 solute carrier family 39 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624433|PMID:16652366) MGI
Ensembl
PMID:16652366 GO_REF:0000107 MGI:3624433 NCBI chrNW_004936580:3,704,738...3,708,671
Ensembl chrNW_004936580:3,704,723...3,708,677
JBrowse link
G Slc39a3 solute carrier family 39 member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624433|PMID:16652366) MGI
Ensembl
PMID:16652366 GO_REF:0000107 MGI:3624433 NCBI chrNW_004936588:1,583,884...1,590,656
Ensembl chrNW_004936588:1,584,061...1,588,983
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948153|PMID:21490221) MGI
Ensembl
PMID:21490221 GO_REF:0000107 MGI:4948153 NCBI chrNW_004936535:9,177,305...9,242,743
Ensembl chrNW_004936535:9,177,143...9,242,566
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:13,056,851...13,215,581
Ensembl chrNW_004936495:13,056,766...13,215,620
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3841513|PMID:19223390) MGI
Ensembl
PMID:19223390 GO_REF:0000107 MGI:3841513 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,835,397...8,922,403
Ensembl chrNW_004936491:8,833,285...8,922,711
JBrowse link
G Wnt3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,943,260...1,985,829
Ensembl chrNW_004936541:1,943,260...1,984,826
JBrowse link
G Wnt7a Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581932|PMID:15967824) MGI
Ensembl
PMID:15967824 GO_REF:0000107 MGI:3581932 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820
JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581932|PMID:15967824) MGI
Ensembl
PMID:15967824 GO_REF:0000107 MGI:3581932 NCBI chrNW_004936783:15,493...50,959
Ensembl chrNW_004936783:18,194...50,983
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608163|PMID:16245338) MGI
Ensembl
PMID:16245338 GO_REF:0000107 MGI:3608163 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
deltoid tuberosity development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Pitx2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:3715390|PMID:17567668), (MGI:4418577|PMID:20059955) UniProt PMID:17567668 PMID:20059955 MGI:3715390 MGI:4418577 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 ALX homeobox 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1095762|PMID:9268572)
(MGI:1095777|PMID:9272948)
MGI
Ensembl
PMID:9268572 PMID:9272948 GO_REF:0000107 MGI:1095762 MGI:1095777 NCBI chrNW_004936562:4,316,550...4,326,022
Ensembl chrNW_004936562:4,314,870...4,326,000
JBrowse link
G B9d1 B9 domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5300833|PMID:22179047) MGI
Ensembl
PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chrNW_004936881:396,930...411,059
Ensembl chrNW_004936881:396,930...411,031
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1095762|PMID:9268572) MGI
Ensembl
PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430000|PMID:20043884) MGI
Ensembl
PMID:20043884 GO_REF:0000107 MGI:4430000 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3799383|PMID:18539921) MGI
Ensembl
PMID:18539921 GO_REF:0000107 MGI:3799383 NCBI chrNW_004936496:3,498,534...3,521,939
Ensembl chrNW_004936496:3,500,303...3,521,673
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821640|PMID:19004860) MGI
Ensembl
PMID:19004860 GO_REF:0000107 MGI:3821640 NCBI chrNW_004936498:3,099,419...3,242,334
Ensembl chrNW_004936498:3,099,396...3,242,335
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3767479|PMID:16079159) MGI
Ensembl
PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5648689|PMID:25877302) MGI
Ensembl
PMID:25877302 GO_REF:0000107 MGI:5648689 NCBI chrNW_004936518:4,706,496...4,847,283
Ensembl chrNW_004936518:4,706,500...4,847,316
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430000|PMID:20043884)
(MGI:2670493|PMID:12923052)
MGI
Ensembl
PMID:12923052 PMID:20043884 GO_REF:0000107 MGI:2670493 MGI:4430000 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,034,134...7,083,005
Ensembl chrNW_004936474:7,034,134...7,083,005
JBrowse link
G Fbxw4 F-box and WD repeat domain containing 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1344213|PMID:10471509)
(MGI:1278141|PMID:9733575)
Ensembl
MGI
PMID:9733575 PMID:10471509 GO_REF:0000107 MGI:1278141 MGI:1344213 NCBI chrNW_004936600:4,072,749...4,162,220
Ensembl chrNW_004936600:4,073,384...4,161,588
JBrowse link
G Flvcr1 FLVCR heme transporter 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3775000|PMID:18258918) MGI
Ensembl
PMID:18258918 GO_REF:0000107 MGI:3775000 NCBI chrNW_004936557:693,445...727,166
Ensembl chrNW_004936557:692,489...726,965
JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5646594|PMID:26234751) MGI
Ensembl
PMID:26234751 GO_REF:0000107 MGI:5646594 NCBI chrNW_004936565:6,671,578...6,837,514
Ensembl chrNW_004936565:6,671,737...6,837,514
JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (MGI:5912570|PMID:27158779)
(MGI:4367921|PMID:19877275)
MGI PMID:19877275 PMID:27158779 MGI:4367921 MGI:5912570 NCBI chrNW_004936664:3,596,764...3,601,676
Ensembl chrNW_004936664:3,596,952...3,601,342
JBrowse link
G Gja1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:3849919|PMID:19439426) MGI PMID:19439426 MGI:3849919 NCBI chrNW_004936658:3,920,043...3,932,987
Ensembl chrNW_004936658:3,920,043...3,932,987
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3833793|PMID:19056373) MGI
Ensembl
PMID:19056373 GO_REF:0000107 MGI:3833793 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5439039|PMID:22841643)
(MGI:3765370|PMID:17714700)
(MGI:1095762|PMID:9268572), (MGI:3692156|PMID:16254602), (MGI:3821634|PMID:19036983)
MGI
Ensembl
PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 GO_REF:0000107 MGI:1095762 MGI:3692156 MGI:3765370 MGI:3821634 MGI:5439039 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Gna12 G protein subunit alpha 12 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2182490|PMID:12077299) MGI
Ensembl
PMID:12077299 GO_REF:0000107 MGI:2182490 NCBI chrNW_004936823:447,979...543,134
Ensembl chrNW_004936823:447,917...543,140
JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4943100|PMID:21377456) MGI
Ensembl
PMID:21377456 GO_REF:0000107 MGI:4943100 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2429440|PMID:12070084) MGI
Ensembl
PMID:12070084 GO_REF:0000107 MGI:2429440 NCBI chrNW_004936516:4,692,926...4,695,625
Ensembl chrNW_004936516:4,692,926...4,695,632
JBrowse link
G Hdac1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667742|PMID:12869760) MGI
Ensembl
PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chrNW_004936478:3,809,288...3,813,014
Ensembl chrNW_004936478:3,809,288...3,813,014
JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667742|PMID:12869760) MGI
Ensembl
PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chrNW_004936512:11,194,876...11,197,316
Ensembl chrNW_004936512:11,194,876...11,197,316
JBrowse link
G Hoxd12 homeobox D12 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:83869|PMID:8900279)
(MGI:3765370|PMID:17714700)
MGI
Ensembl
PMID:8900279 PMID:17714700 GO_REF:0000107 MGI:3765370 MGI:83869 NCBI chrNW_004936509:5,586,772...5,587,730
Ensembl chrNW_004936509:5,586,706...5,587,809
JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1097490|PMID:9342042)
(MGI:3765370|PMID:17714700)
(MGI:83869|PMID:8900279)
MGI
Ensembl
PMID:8900279 PMID:9342042 PMID:17714700 GO_REF:0000107 MGI:1097490 MGI:3765370 MGI:83869 NCBI chrNW_004936509:5,579,846...5,581,651
Ensembl chrNW_004936509:5,579,843...5,581,651
JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chrNW_004936602:908,034...956,634
Ensembl chrNW_004936602:905,486...956,521
JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5505384|PMID:23469164) MGI
Ensembl
PMID:23469164 GO_REF:0000107 MGI:5505384 NCBI chrNW_004936694:2,344,448...2,419,396
Ensembl chrNW_004936694:2,344,283...2,423,520
JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3579954|PMID:15930098) MGI
Ensembl
PMID:15930098 GO_REF:0000107 MGI:3579954 NCBI chrNW_004936530:2,965,587...3,003,758
Ensembl chrNW_004936530:2,967,533...3,003,980
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:3821634|PMID:19036983)
(MGI:2660994|PMID:12701101), (MGI:3692156|PMID:16254602)
(MGI:3579954|PMID:15930098)
(MGI:3577662|PMID:15755804), (MGI:3579954|PMID:15930098)
MGI PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 MGI:2660994 MGI:3577662 MGI:3579954 MGI:3692156 MGI:3821634 NCBI chrNW_004936720:1,041,216...1,168,725
Ensembl chrNW_004936720:1,041,211...1,168,748
JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4822496|PMID:20660756) MGI
Ensembl
PMID:20660756 GO_REF:0000107 MGI:4822496 NCBI chrNW_004936569:1,474,693...1,480,562
Ensembl chrNW_004936569:1,474,665...1,480,568
JBrowse link
G Intu inturned planar cell polarity protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5644615|PMID:25774014) MGI
Ensembl
PMID:25774014 GO_REF:0000107 MGI:5644615 NCBI chrNW_004936642:2,950,197...3,025,079
Ensembl chrNW_004936642:2,921,852...3,025,083
JBrowse link
G Lmbr1 limb development membrane protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2151954|PMID:11606546) MGI
Ensembl
PMID:11606546 GO_REF:0000107 MGI:2151954 NCBI chrNW_004936797:745,851...873,388
Ensembl chrNW_004936797:745,845...868,632
JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1097490|PMID:9342042) MGI
Ensembl
PMID:9342042 GO_REF:0000107 MGI:1097490 NCBI chrNW_004936509:5,426,759...5,493,574
Ensembl chrNW_004936509:5,427,278...5,493,999
JBrowse link
G LOC101971998 guanine nucleotide-binding protein G(q) subunit alpha acts_upstream_of_or_within ISO (MGI:2182490|PMID:12077299) MGI PMID:12077299 MGI:2182490 NCBI chrNW_004936503:13,098,517...13,276,106
Ensembl chrNW_004936503:13,099,558...13,276,152
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3623169|PMID:16517118) Ensembl
MGI
PMID:16517118 GO_REF:0000107 MGI:3623169 NCBI chrNW_004936562:2,211,519...2,262,899
Ensembl chrNW_004936562:2,211,514...2,263,937
JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3045836|PMID:15142971) MGI
Ensembl
PMID:15142971 GO_REF:0000107 MGI:3045836 NCBI chrNW_004936599:1,746,309...1,814,471
Ensembl chrNW_004936599:1,746,406...1,814,321
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512)
(MGI:3045836|PMID:15142971)
MGI PMID:15142971 PMID:19795512 MGI:3045836 MGI:4413372 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5771618|PMID:26755636) MGI
Ensembl
PMID:26755636 GO_REF:0000107 MGI:5771618 NCBI chrNW_004936509:3,029,942...3,203,319
Ensembl chrNW_004936509:3,029,979...3,202,796
JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367169|PMID:19776033)
(MGI:5487695|PMID:23454480)
(MGI:4868517|PMID:21045211)
MGI
Ensembl
PMID:19776033 PMID:21045211 PMID:23454480 GO_REF:0000107 MGI:4367169 MGI:4868517 MGI:5487695 NCBI chrNW_004936490:4,865,243...4,876,601
Ensembl chrNW_004936490:4,865,243...4,878,912
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948979|PMID:21465616) MGI
Ensembl
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948979|PMID:21465616) MGI
Ensembl
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3790402|PMID:17360777) MGI PMID:17360777 MGI:3790402 NCBI chrNW_004936493:14,618,176...14,624,201 JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:44,024,497...44,032,429
Ensembl chrNW_004936470:44,024,439...44,032,429
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255
JBrowse link
G Rab23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804) MGI PMID:9636176 PMID:15755804 MGI:1267118 MGI:3577662 NCBI chrNW_004936476:4,095,829...4,127,714
Ensembl chrNW_004936476:4,095,329...4,127,701
JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (MGI:4822496|PMID:20660756) MGI PMID:20660756 MGI:4822496 NCBI chrNW_004936796:630,307...675,157
Ensembl chrNW_004936796:630,756...674,279
JBrowse link
G Sall1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3806414|PMID:18729207) MGI
Ensembl
PMID:18729207 GO_REF:0000107 MGI:3806414 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3039193|PMID:15075292), (MGI:4822496|PMID:20660756)
(MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940)
(MGI:3579954|PMID:15930098)
MGI
Ensembl
PMID:15075292 PMID:15930098 PMID:17504940 PMID:17504941 PMID:20660756 GO_REF:0000107 MGI:3039193 MGI:3579954 MGI:3710451 MGI:3710452 MGI:4822496 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123
JBrowse link
G Tbc1d32 TBC1 domain family member 32 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439200|PMID:20159594) MGI
Ensembl
PMID:20159594 GO_REF:0000107 MGI:4439200 NCBI chrNW_004936658:3,632,314...3,814,134
Ensembl chrNW_004936658:3,632,536...3,812,805
JBrowse link
G Tbx2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:2,769,264...2,778,342
Ensembl chrNW_004936490:2,769,231...2,805,238
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532232|PMID:23844108) MGI
Ensembl
PMID:23844108 GO_REF:0000107 MGI:5532232 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361
JBrowse link
G Tmem107 transmembrane protein 107 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,404,017...1,406,756
Ensembl chrNW_004936595:1,403,442...1,406,783
JBrowse link
G Tmem231 transmembrane protein 231 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5300833|PMID:22179047) MGI
Ensembl
PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chrNW_004936475:24,215,817...24,232,689
Ensembl chrNW_004936475:24,215,659...24,232,947
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chrNW_004936525:115,614...174,641
Ensembl chrNW_004936525:115,479...174,694
JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within ISO (MGI:5493390|PMID:23141541) MGI PMID:23141541 MGI:5493390 NCBI chrNW_004936471:6,003,294...6,108,677
Ensembl chrNW_004936471:6,009,091...6,154,529
JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3841503|PMID:19286674), (MGI:3844764|PMID:19334287) MGI
Ensembl
PMID:19286674 PMID:19334287 GO_REF:0000107 MGI:3841503 MGI:3844764 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3042355|PMID:15030764) MGI
Ensembl
PMID:15030764 GO_REF:0000107 MGI:3042355 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5544506|PMID:24302887) MGI
Ensembl
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chrNW_004936491:8,238,644...8,749,172
Ensembl chrNW_004936491:8,239,284...8,485,636
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413372|PMID:19795512) MGI
Ensembl
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
G Wnt7a Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 ISO RGD PMID:19191224 RGD:2312786 NCBI chrNW_004936612:389,877...570,595
Ensembl chrNW_004936612:395,177...570,595
JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3046038|PMID:15069081), (MGI:4422129|PMID:20034106) MGI
Ensembl
PMID:15069081 PMID:20034106 GO_REF:0000107 MGI:3046038 MGI:4422129 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335
JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2151109|PMID:11641221) MGI
Ensembl
PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chrNW_004936704:1,519,932...1,530,470
Ensembl chrNW_004936704:1,520,639...1,530,470
JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2151109|PMID:11641221) MGI
Ensembl
PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chrNW_004936562:4,316,550...4,326,022
Ensembl chrNW_004936562:4,314,870...4,326,000
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:2,168,104...2,867,560
Ensembl chrNW_004936606:2,168,625...2,865,758
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:71462|PMID:7720575) MGI
Ensembl
PMID:7720575 GO_REF:0000107 MGI:71462 NCBI chrNW_004936580:5,861,051...5,866,818
Ensembl chrNW_004936580:5,860,562...5,866,856
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055626|PMID:15371327) MGI
Ensembl
PMID:15371327 GO_REF:0000107 MGI:3055626 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO (MGI:1194987|PMID:9362463) MGI PMID:9362463 MGI:1194987 NCBI chrNW_004936469:51,439,944...51,451,194 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5462316|PMID:22916278) MGI
Ensembl
PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chrNW_004936478:3,809,288...3,813,014
Ensembl chrNW_004936478:3,809,288...3,813,014
JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530958|PMID:15733672) MGI
Ensembl
PMID:15733672 GO_REF:0000107 MGI:3530958 NCBI chrNW_004936478:3,824,715...3,827,277
Ensembl chrNW_004936478:3,824,715...3,827,277
JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:78984|PMID:8625797) MGI
Ensembl
PMID:8625797 GO_REF:0000107 MGI:78984 NCBI chrNW_004936478:3,789,961...3,793,116
Ensembl chrNW_004936478:3,789,961...3,793,845
JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:78984|PMID:8625797) MGI
Ensembl
PMID:8625797 GO_REF:0000107 MGI:78984 NCBI chrNW_004936509:5,609,744...5,611,943
Ensembl chrNW_004936509:5,609,744...5,611,943
JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chrNW_004936602:908,034...956,634
Ensembl chrNW_004936602:905,486...956,521
JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1097490|PMID:9342042)
(MGI:5462316|PMID:22916278)
MGI
Ensembl
PMID:9342042 PMID:22916278 GO_REF:0000107 MGI:1097490 MGI:5462316 NCBI chrNW_004936509:5,426,759...5,493,574
Ensembl chrNW_004936509:5,427,278...5,493,999
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3578068|PMID:15880584)
(MGI:1891551|PMID:11029008)
(MGI:3774879|PMID:18256198)
(MGI:4413396|PMID:19653321)
MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 MGI:1891551 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chrNW_004936593:2,742,236...3,282,596
Ensembl chrNW_004936593:3,106,202...3,282,596
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948979|PMID:21465616) MGI
Ensembl
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948979|PMID:21465616) MGI
Ensembl
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:44,024,497...44,032,429
Ensembl chrNW_004936470:44,024,439...44,032,429
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709664|PMID:17473173) MGI
Ensembl
PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833
JBrowse link
G Reck reversion inducing cysteine rich protein with kazal motifs acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5424521|PMID:23213437) MGI
Ensembl
PMID:23213437 GO_REF:0000107 MGI:5424521 NCBI chrNW_004936524:4,021,666...4,099,703
Ensembl chrNW_004936524:4,021,660...4,099,705
JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3715393|PMID:17553904) MGI
Ensembl
PMID:17553904 GO_REF:0000107 MGI:3715393 NCBI chrNW_004936475:6,219,187...6,321,612
Ensembl chrNW_004936475:6,215,475...6,321,618
JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3774879|PMID:18256198) MGI
Ensembl
PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chrNW_004936470:36,680,716...36,815,347
Ensembl chrNW_004936470:36,681,506...36,814,626
JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5462316|PMID:22916278) MGI
Ensembl
PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chrNW_004936476:14,695,965...14,818,246
Ensembl chrNW_004936476:14,695,965...14,905,157
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1928592|PMID:11118883), (MGI:2149276|PMID:11476582) MGI
Ensembl
PMID:11118883 PMID:11476582 GO_REF:0000107 MGI:1928592 MGI:2149276 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5462316|PMID:22916278) MGI
Ensembl
PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chrNW_004936519:4,810,777...4,818,733
Ensembl chrNW_004936519:4,809,687...4,818,792
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361
JBrowse link
G Tbx5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2150876|PMID:11572777), (MGI:2448173|PMID:12490567) MGI
Ensembl
PMID:11572777 PMID:12490567 GO_REF:0000107 MGI:2150876 MGI:2448173 NCBI chrNW_004936558:7,408,229...7,454,897
Ensembl chrNW_004936558:7,408,222...7,454,901
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (MGI:1313057|PMID:9811866) UniProt PMID:9811866 MGI:1313057 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317
JBrowse link
G Tp63 tumor protein p63 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5824492|PMID:25503409) Ensembl
MGI
PMID:25503409 GO_REF:0000107 MGI:5824492 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2180404|PMID:12175489) MGI
Ensembl
PMID:12175489 GO_REF:0000107 MGI:2180404 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
G Wnt3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,943,260...1,985,829
Ensembl chrNW_004936541:1,943,260...1,984,826
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1194987|PMID:9362463)
(MGI:3578068|PMID:15880584)
MGI
Ensembl
PMID:9362463 PMID:15880584 GO_REF:0000107 MGI:1194987 MGI:3578068 MGI:48652 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chrNW_004936864:216,381...245,885
Ensembl chrNW_004936864:239,651...244,312
JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff3 ALF transcription elongation factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:771,265...1,264,456
Ensembl chrNW_004936661:771,265...1,262,166
JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2151109|PMID:11641221) MGI
Ensembl
PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chrNW_004936704:1,519,932...1,530,470
Ensembl chrNW_004936704:1,520,639...1,530,470
JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2151109|PMID:11641221) MGI
Ensembl
PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chrNW_004936562:4,316,550...4,326,022
Ensembl chrNW_004936562:4,314,870...4,326,000
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1889107|PMID:10964473) MGI
Ensembl
PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611161|PMID:16207732) MGI
Ensembl
PMID:16207732 GO_REF:0000107 MGI:3611161 NCBI chrNW_004936496:12,381,225...12,505,121
Ensembl chrNW_004936496:12,381,126...12,505,150
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3773938|PMID:18231602)
(MGI:2670493|PMID:12923052)
MGI
Ensembl
PMID:12923052 PMID:18231602 GO_REF:0000107 MGI:2670493 MGI:3773938 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3609457|PMID:16319892) MGI PMID:16319892 MGI:3609457 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (MGI:3608165|PMID:16245339) MGI PMID:16245339 MGI:3608165 NCBI chrNW_004936599:894,091...895,676 JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608165|PMID:16245339) MGI
Ensembl
PMID:16245339 GO_REF:0000107 MGI:3608165 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1889107|PMID:10964473) MGI
Ensembl
PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chrNW_004936691:1,060,013...1,459,736
Ensembl chrNW_004936691:1,059,994...1,459,740
JBrowse link
G LOC101971027 neuroendocrine secretory protein 55 acts_upstream_of_or_within ISO (MGI:3619837|PMID:15797856) MGI PMID:15797856 MGI:3619837 NCBI chrNW_004936530:1,353,432...1,407,437 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3578068|PMID:15880584)
(MGI:4413396|PMID:19653321)
(MGI:3774879|PMID:18256198)
MGI PMID:15880584 PMID:18256198 PMID:19653321 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chrNW_004936593:2,742,236...3,282,596
Ensembl chrNW_004936593:3,106,202...3,282,596
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2682174|PMID:14500757) MGI
Ensembl
PMID:14500757 GO_REF:0000107 MGI:2682174 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:11850435 RGD:1582550 NCBI chrNW_004936551:5,040,084...5,050,384
Ensembl chrNW_004936551:5,040,084...5,050,384
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948979|PMID:21465616) MGI
Ensembl
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948979|PMID:21465616) MGI
Ensembl
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608163|PMID:16245338) MGI
Ensembl
PMID:16245338 GO_REF:0000107 MGI:3608163 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:44,024,497...44,032,429
Ensembl chrNW_004936470:44,024,439...44,032,429
JBrowse link
G Pitx1 paired like homeodomain 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3773938|PMID:18231602) MGI
Ensembl
PMID:18231602 GO_REF:0000107 MGI:3773938 NCBI chrNW_004936597:2,211,087...2,217,065
Ensembl chrNW_004936597:2,211,080...2,217,071
JBrowse link
G Pitx2 paired like homeodomain 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3773938|PMID:18231602) MGI
Ensembl
PMID:18231602 GO_REF:0000107 MGI:3773938 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Rarb retinoic acid receptor beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1334064|PMID:10075839) MGI
Ensembl
PMID:10075839 GO_REF:0000107 MGI:1334064 NCBI chrNW_004936473:16,983,829...17,146,517
Ensembl chrNW_004936473:16,983,600...17,148,885
JBrowse link
G Rarg retinoic acid receptor gamma acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1334064|PMID:10075839) MGI
Ensembl
PMID:10075839 GO_REF:0000107 MGI:1334064 NCBI chrNW_004936512:10,502,954...10,524,796
Ensembl chrNW_004936512:10,500,622...10,524,824
JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3715393|PMID:17553904) MGI
Ensembl
PMID:17553904 GO_REF:0000107 MGI:3715393 NCBI chrNW_004936475:6,219,187...6,321,612
Ensembl chrNW_004936475:6,215,475...6,321,618
JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3774879|PMID:18256198) MGI
Ensembl
PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chrNW_004936470:36,680,716...36,815,347
Ensembl chrNW_004936470:36,681,506...36,814,626
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1928592|PMID:11118883) MGI
Ensembl
PMID:11118883 GO_REF:0000107 MGI:1928592 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3604915|PMID:16192310) MGI PMID:16192310 MGI:3604915 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5532232|PMID:23844108) MGI
Ensembl
PMID:23844108 GO_REF:0000107 MGI:5532232 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361
JBrowse link
G Tbx4 T-box transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:2,823,531...2,853,282
Ensembl chrNW_004936490:2,827,416...2,852,917
JBrowse link
G Tp63 tumor protein p63 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5824492|PMID:25503409) Ensembl
MGI
PMID:25503409 GO_REF:0000107 MGI:5824492 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
G Wnt3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,943,260...1,985,829
Ensembl chrNW_004936541:1,943,260...1,984,826
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578068|PMID:15880584) MGI
Ensembl
PMID:15880584 GO_REF:0000107 MGI:3578068 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1859075|PMID:10835630) RGD
Ensembl
MGI
PMID:10835630 PMID:19191224 GO_REF:0000107 MGI:1859075 RGD:2312786 NCBI chrNW_004936612:389,877...570,595
Ensembl chrNW_004936612:395,177...570,595
JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3526782|PMID:15537664) MGI
Ensembl
PMID:15537664 GO_REF:0000107 MGI:3526782 NCBI chrNW_004936475:18,049,134...18,052,123
Ensembl chrNW_004936475:18,045,662...18,052,172
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2681052|PMID:14623241) MGI
Ensembl
PMID:14623241 GO_REF:0000107 MGI:2681052 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335
JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO (MGI:1314705|PMID:9847249) MGI PMID:9847249 MGI:1314705 NCBI chrNW_004936507:2,775,752...2,797,065
Ensembl chrNW_004936507:2,775,752...2,797,062
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1270933|PMID:9664686) MGI
Ensembl
PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1270933|PMID:9664686) MGI
Ensembl
PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821640|PMID:19004860) MGI
Ensembl
PMID:19004860 GO_REF:0000107 MGI:3821640 NCBI chrNW_004936498:3,099,419...3,242,334
Ensembl chrNW_004936498:3,099,396...3,242,335
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3767479|PMID:16079159) MGI
Ensembl
PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221
JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3588609|PMID:16040801) MGI PMID:16040801 MGI:3588609 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3052394|PMID:15242796) MGI
Ensembl
PMID:15242796 GO_REF:0000107 MGI:3052394 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166
JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2181241|PMID:12112878)
(MGI:3794467|PMID:18326838)
MGI
Ensembl
PMID:12112878 PMID:18326838 GO_REF:0000107 MGI:2181241 MGI:3794467 NCBI chrNW_004936585:3,462,063...3,466,641
Ensembl chrNW_004936585:3,461,944...3,466,641
JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2181241|PMID:12112878)
(MGI:3794467|PMID:18326838)
MGI
Ensembl
PMID:12112878 PMID:18326838 GO_REF:0000107 MGI:2181241 MGI:3794467 NCBI chrNW_004936585:3,477,081...3,481,087
Ensembl chrNW_004936585:3,476,692...3,481,087
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610248|PMID:16229832) MGI
Ensembl
PMID:16229832 GO_REF:0000107 MGI:3610248 NCBI chrNW_004936551:4,584,438...4,913,829
Ensembl chrNW_004936551:4,584,438...4,913,825
JBrowse link
G En1 engrailed homeobox 1 involved_in
acts_upstream_of_or_within
ISO (MGI:75252|PMID:7624797)
(MGI:3052394|PMID:15242796)
(MGI:81767|PMID:8684466)
ParkinsonsUK-UCL
MGI
PMID:7624797 PMID:8684466 PMID:15242796 MGI:3052394 MGI:75252 MGI:81767 NCBI chrNW_004936469:51,439,944...51,451,194 JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934650|PMID:11350121)
(MGI:1933664|PMID:11285249)
MGI
Ensembl
PMID:11285249 PMID:11350121 GO_REF:0000107 MGI:1933664 MGI:1934650 NCBI chrNW_004936504:1,535,629...1,757,386
Ensembl chrNW_004936504:1,535,624...1,757,435
JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (MGI:3056042|PMID:15328019) MGI PMID:15328019 MGI:3056042 NCBI chrNW_004936599:894,091...895,676 JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714711|PMID:17576930) MGI
Ensembl
PMID:17576930 GO_REF:0000107 MGI:3714711 NCBI chrNW_004936720:282,291...316,629
Ensembl chrNW_004936720:279,521...316,674
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3608262|PMID:16207751) MGI PMID:16207751 MGI:3608262 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508
JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5505384|PMID:23469164) MGI
Ensembl
PMID:23469164 GO_REF:0000107 MGI:5505384 NCBI chrNW_004936676:1,870,856...2,138,832
Ensembl chrNW_004936676:1,870,814...2,135,823
JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3513212|PMID:15542031) MGI
Ensembl
PMID:15542031 GO_REF:0000107 MGI:3513212 NCBI chrNW_004936561:5,343,038...5,347,721
Ensembl chrNW_004936561:5,343,038...5,347,721
JBrowse link
G Gja5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (MGI:3581374|PMID:15923624) MGI PMID:15923624 MGI:3581374 NCBI chrNW_004936867:269,477...279,549 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608261|PMID:16284117)
(MGI:3851667|PMID:19422820)
(MGI:2384366|PMID:12142027), (MGI:2445242|PMID:12435361), (MGI:2445270|PMID:12435627), (MGI:4367286|PMID:19809516), (MGI:52587|PMID:8387379)
MGI
Ensembl
PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... GO_REF:0000107 MGI:2384366 MGI:2445242 MGI:2445270 MGI:3608261 MGI:3851667 MGI:4367286 MGI:52587 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2665160|PMID:12808456) MGI
Ensembl
PMID:12808456 GO_REF:0000107 MGI:2665160 NCBI chrNW_004936673:1,394,743...1,399,726
Ensembl chrNW_004936673:1,395,757...1,396,311
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1334099|PMID:10090727) MGI
Ensembl
PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505
JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chrNW_004936478:3,798,679...3,802,007 JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3043491|PMID:14668414) MGI
Ensembl
PMID:14668414 GO_REF:0000107 MGI:3043491 NCBI chrNW_004936478:3,809,288...3,813,014
Ensembl chrNW_004936478:3,809,288...3,813,014
JBrowse link
G Hoxc10 homeobox C10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2667742|PMID:12869760) MGI
Ensembl
PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chrNW_004936512:11,207,173...11,212,365
Ensembl chrNW_004936512:11,207,173...11,212,365
JBrowse link
G Hoxd10 homeobox D10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2667742|PMID:12869760) Ensembl
MGI
PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chrNW_004936509:5,603,661...5,606,850
Ensembl chrNW_004936509:5,603,642...5,606,850
JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2177382|PMID:11850178) MGI
Ensembl
PMID:11850178 GO_REF:0000107 MGI:2177382 NCBI chrNW_004936509:5,579,846...5,581,651
Ensembl chrNW_004936509:5,579,843...5,581,651
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1334099|PMID:10090727) MGI
Ensembl
PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469
JBrowse link
G LOC101965998 notch receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610505|PMID:16169548) MGI
Ensembl
PMID:16169548 GO_REF:0000107 MGI:3610505 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321
JBrowse link
G LOC101975674 cytochrome P450 26B1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3037623|PMID:15030763) MGI
Ensembl
PMID:15030763 GO_REF:0000107 MGI:3037623 NCBI chrNW_004936491:16,010,394...16,028,852
Ensembl chrNW_004936491:16,010,070...16,028,895
JBrowse link
G Lrp4 LDL receptor related protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3619629|PMID:16207730)
(MGI:3703100|PMID:17119023)
MGI
Ensembl
PMID:16207730 PMID:17119023 GO_REF:0000107 MGI:3619629 MGI:3703100 NCBI chrNW_004936562:2,211,519...2,262,899
Ensembl chrNW_004936562:2,211,514...2,263,937
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4458999|PMID:20359476) MGI PMID:20359476 MGI:4458999 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 involved_in ISO (MGI:2675975|PMID:12915312) UniProt PMID:12915312 MGI:2675975 NCBI chrNW_004936519:419,332...580,706
Ensembl chrNW_004936519:419,571...580,730
JBrowse link
G Megf8 multiple EGF like domains 8 involved_in ISS
IEA
CAFA
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936706:157,167...198,071
Ensembl chrNW_004936706:157,019...197,500
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3851667|PMID:19422820)
(MGI:3580732|PMID:15930102)
MGI
Ensembl
PMID:15930102 PMID:19422820 GO_REF:0000107 MGI:3580732 MGI:3851667 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3580732|PMID:15930102)
(MGI:3851667|PMID:19422820)
MGI
Ensembl
PMID:15930102 PMID:19422820 GO_REF:0000107 MGI:3580732 MGI:3851667 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 ISO RGD PMID:14718386 RGD:1302424 NCBI chrNW_004936473:3,592,259...3,594,717
Ensembl chrNW_004936473:3,592,253...3,594,329
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610505|PMID:16169548) MGI
Ensembl
PMID:16169548 GO_REF:0000107 MGI:3610505 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428
JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629247|PMID:16672333) MGI
Ensembl
PMID:16672333 GO_REF:0000107 MGI:3629247 NCBI chrNW_004936481:20,200,236...20,440,623
Ensembl chrNW_004936481:20,203,405...20,440,629
JBrowse link
G Pbx2 PBX homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3629247|PMID:16672333) MGI
Ensembl
PMID:16672333 GO_REF:0000107 MGI:3629247 NCBI chrNW_004936727:1,413,063...1,418,304
Ensembl chrNW_004936727:1,412,632...1,419,438
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255
JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI
Ensembl
PMID:9729491 PMID:9882503 GO_REF:0000107 MGI:1306737 MGI:1328643 NCBI chrNW_004936481:16,208,243...16,272,836
Ensembl chrNW_004936481:16,205,240...16,272,850
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610505|PMID:16169548) MGI
Ensembl
PMID:16169548 GO_REF:0000107 MGI:3610505 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2135419|PMID:11389830)
(MGI:2152606|PMID:11784021)
MGI
Ensembl
PMID:11389830 PMID:11784021 GO_REF:0000107 MGI:2135419 MGI:2152606 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within ISO (MGI:3614736|PMID:16380715) MGI PMID:16380715 MGI:3614736 NCBI chrNW_004936514:3,285,778...3,302,179
Ensembl chrNW_004936514:3,285,531...3,303,644
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2135419|PMID:11389830)
(MGI:3053241|PMID:15315763)
(MGI:3851667|PMID:19422820)
MGI
Ensembl
PMID:11389830 PMID:15315763 PMID:19422820 GO_REF:0000107 MGI:2135419 MGI:3053241 MGI:3851667 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3621617|PMID:16537395)
(MGI:3714677|PMID:17481601)
MGI
Ensembl
PMID:16537395 PMID:17481601 GO_REF:0000107 MGI:3621617 MGI:3714677 NCBI chrNW_004936519:4,810,777...4,818,733
Ensembl chrNW_004936519:4,809,687...4,818,792
JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:2445270|PMID:12435627) MGI PMID:12435627 MGI:2445270 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631
JBrowse link
G Sp8 Sp8 transcription factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2679409|PMID:14597661) MGI
Ensembl
PMID:14597661 GO_REF:0000107 MGI:2679409 NCBI chrNW_004936546:6,744,209...6,746,797
Ensembl chrNW_004936546:6,744,209...6,746,797
JBrowse link
G Tbx4 T-box transcription factor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2660720|PMID:12736212) MGI
Ensembl
PMID:12736212 GO_REF:0000107 MGI:2660720 NCBI chrNW_004936490:2,823,531...2,853,282
Ensembl chrNW_004936490:2,827,416...2,852,917
JBrowse link
G Tbx5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2660722|PMID:12736217)
(MGI:3614736|PMID:16380715)
MGI
Ensembl
PMID:12736217 PMID:16380715 GO_REF:0000107 MGI:2660722 MGI:3614736 NCBI chrNW_004936558:7,408,229...7,454,897
Ensembl chrNW_004936558:7,408,222...7,454,901
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3794467|PMID:18326838)
(MGI:1335634|PMID:10227293)
MGI
Ensembl
PMID:10227293 PMID:18326838 GO_REF:0000107 MGI:1335634 MGI:3794467 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3042355|PMID:15030764)
(MGI:2384366|PMID:12142027)
(MGI:1934650|PMID:11350121)
MGI
Ensembl
PMID:11350121 PMID:12142027 PMID:15030764 GO_REF:0000107 MGI:1934650 MGI:2384366 MGI:3042355 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
G Wdr19 WD repeat domain 19 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5314316|PMID:22228095) Ensembl
MGI
PMID:22228095 GO_REF:0000107 MGI:5314316 NCBI chrNW_004936482:6,863,592...6,937,810
Ensembl chrNW_004936482:6,863,571...6,937,979
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1329804|PMID:10021340) MGI
Ensembl
PMID:10021340 GO_REF:0000107 MGI:1329804 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3052394|PMID:15242796) MGI
Ensembl
PMID:15242796 GO_REF:0000107 MGI:3052394 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI MGI:61278 NCBI chrNW_004936612:389,877...570,595
Ensembl chrNW_004936612:395,177...570,595
JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5499279|PMID:23439395) MGI
Ensembl
PMID:23439395 GO_REF:0000107 MGI:5499279 NCBI chrNW_004936470:40,416,254...40,454,717
Ensembl chrNW_004936470:40,416,014...40,454,062
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948979|PMID:21465616) MGI
Ensembl
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4948979|PMID:21465616) MGI
Ensembl
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chrNW_004936609:1,216,436...1,221,528
Ensembl chrNW_004936609:1,216,436...1,221,561
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255
JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:44,024,497...44,032,429
Ensembl chrNW_004936470:44,024,439...44,032,429
JBrowse link
forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5499270|PMID:23610558) MGI
Ensembl
PMID:23610558 GO_REF:0000107 MGI:5499270 NCBI chrNW_004936517:428,689...531,360
Ensembl chrNW_004936517:429,292...531,361
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3717025|PMID:17554679) MGI
Ensembl
PMID:17554679 GO_REF:0000107 MGI:3717025 NCBI chrNW_004936673:1,424,513...1,838,277
Ensembl chrNW_004936673:1,432,927...1,719,966
JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:65616|PMID:8145850) MGI
Ensembl
PMID:8145850 GO_REF:0000107 MGI:65616 NCBI chrNW_004936561:5,343,038...5,347,721
Ensembl chrNW_004936561:5,343,038...5,347,721
JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1350864|PMID:10642795) MGI
Ensembl
PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chrNW_004936509:5,603,661...5,606,850
Ensembl chrNW_004936509:5,603,642...5,606,850
JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1350864|PMID:10642795) MGI
Ensembl
PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chrNW_004936509:5,609,744...5,611,943
Ensembl chrNW_004936509:5,609,744...5,611,943
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450
JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413
JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chrNW_004936616:903,220...922,635
Ensembl chrNW_004936616:901,076...922,641
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9207801) MGI
Ensembl
PMID:9207801 GO_REF:0000107 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361
JBrowse link
G Tbx5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3527352|PMID:15621531)
(PMID:8988164), (PMID:8988165)
MGI
Ensembl
PMID:8988164 PMID:8988165 PMID:15621531 GO_REF:0000107 MGI:3527352 NCBI chrNW_004936558:7,408,229...7,454,897
Ensembl chrNW_004936558:7,408,222...7,454,901
JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1313057|PMID:9811866) MGI PMID:9811866 MGI:1313057 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317
JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:9,855,992...9,884,788
Ensembl chrNW_004936476:9,857,773...9,884,784
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI MGI:48652 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1859075|PMID:10835630) MGI
Ensembl
PMID:10835630 GO_REF:0000107 MGI:1859075 NCBI chrNW_004936612:389,877...570,595
Ensembl chrNW_004936612:395,177...570,595
JBrowse link
hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI MGI:61157 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3621084|PMID:16556916) MGI
Ensembl
PMID:16556916 GO_REF:0000107 MGI:3621084 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3717025|PMID:17554679) MGI
Ensembl
PMID:17554679 GO_REF:0000107 MGI:3717025 NCBI chrNW_004936673:1,424,513...1,838,277
Ensembl chrNW_004936673:1,432,927...1,719,966
JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3722565|PMID:17085896)
(MGI:65616|PMID:8145850)
MGI
Ensembl
PMID:8145850 PMID:17085896 GO_REF:0000107 MGI:3722565 MGI:65616 NCBI chrNW_004936561:5,343,038...5,347,721
Ensembl chrNW_004936561:5,343,038...5,347,721
JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1350864|PMID:10642795) MGI
Ensembl
PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chrNW_004936509:5,603,661...5,606,850
Ensembl chrNW_004936509:5,603,642...5,606,850
JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1350864|PMID:10642795) MGI
Ensembl
PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chrNW_004936509:5,609,744...5,611,943
Ensembl chrNW_004936509:5,609,744...5,611,943
JBrowse link
G Pitx1 paired like homeodomain 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3527352|PMID:15621531), (MGI:3689784|PMID:16989801)
(MGI:1332284|PMID:10049363)
(MGI:1333095|PMID:10101115)
MGI
Ensembl
PMID:10049363 PMID:10101115 PMID:15621531 PMID:16989801 GO_REF:0000107 MGI:1332284 MGI:1333095 MGI:3527352 MGI:3689784 NCBI chrNW_004936597:2,211,087...2,217,065
Ensembl chrNW_004936597:2,211,080...2,217,071
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1095757|PMID:9262482) MGI
Ensembl
PMID:9262482 GO_REF:0000107 MGI:1095757 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413
JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chrNW_004936616:903,220...922,635
Ensembl chrNW_004936616:901,076...922,641
JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:9,855,992...9,884,788
Ensembl chrNW_004936476:9,857,773...9,884,784
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1353858|PMID:10700192) MGI
Ensembl
PMID:10700192 GO_REF:0000107 MGI:1353858 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI MGI:48652 NCBI chrNW_004936898:45,903...70,313
Ensembl chrNW_004936898:45,115...70,326
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1859075|PMID:10835630) MGI
Ensembl
PMID:10835630 GO_REF:0000107 MGI:1859075 NCBI chrNW_004936612:389,877...570,595
Ensembl chrNW_004936612:395,177...570,595
JBrowse link
limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1309706|PMID:9784490) MGI
Ensembl
PMID:9784490 GO_REF:0000107 MGI:1309706 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:1197797|PMID:9435295)
(MGI:1346744|PMID:10518547)
MGI PMID:9435295 PMID:10518547 MGI:1197797 MGI:1346744 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019
JBrowse link
G Plxna2 plexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:4,808,371...4,920,453
Ensembl chrNW_004936557:4,738,447...4,920,453
JBrowse link
G Sema3c semaphorin 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:903,306...1,063,024
Ensembl chrNW_004936810:903,304...1,063,024
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1928592|PMID:11118883) MGI
Ensembl
PMID:11118883 GO_REF:0000107 MGI:1928592 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
G Wnt3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,943,260...1,985,829
Ensembl chrNW_004936541:1,943,260...1,984,826
JBrowse link
G Znf219 zinc finger protein 219 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936880:293,874...308,160
Ensembl chrNW_004936880:289,876...298,243
JBrowse link
limb epidermis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdf1 keratinocyte differentiation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:11,341,415...11,351,066
Ensembl chrNW_004936474:11,343,539...11,351,168
JBrowse link
G Pias4 protein inhibitor of activated STAT 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1861161|PMID:10854042) Ensembl
UniProt
PMID:10854042 GO_REF:0000107 MGI:1861161 NCBI chrNW_004936588:2,287,941...2,302,875
Ensembl chrNW_004936588:2,287,996...2,302,691
JBrowse link
limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,886,494...8,923,921
Ensembl chrNW_004936506:8,886,494...8,923,930
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4834113|PMID:20404326) MGI
Ensembl
PMID:20404326 GO_REF:0000107 MGI:4834113 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
JBrowse link
limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 ALX homeobox 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1314705|PMID:9847249)
(MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249)
MGI
Ensembl
PMID:9374397 PMID:9847249 GO_REF:0000107 MGI:1098911 MGI:1314705 NCBI chrNW_004936562:4,316,550...4,326,022
Ensembl chrNW_004936562:4,314,870...4,326,000
JBrowse link
G Asph aspartate beta-hydroxylase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2177999|PMID:11773073) MGI
Ensembl
PMID:11773073 GO_REF:0000107 MGI:2177999 NCBI chrNW_004936496:11,604,992...11,815,680
Ensembl chrNW_004936496:11,604,680...11,816,852
JBrowse link
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1929371|PMID:11163212) MGI
Ensembl
PMID:11163212 GO_REF:0000107 MGI:1929371 NCBI chrNW_004936476:25,347,608...25,354,772
Ensembl chrNW_004936476:25,347,545...25,355,789
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1929371|PMID:11163212) MGI
Ensembl
PMID:11163212 GO_REF:0000107 MGI:1929371 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820
JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:6,848,026...6,868,522
Ensembl chrNW_004936544:6,848,221...6,868,088
JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1334159|PMID:10100048) MGI
Ensembl
PMID:10100048 GO_REF:0000107 MGI:1334159 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853
JBrowse link
G Evx2 even-skipped homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84613|PMID:8978698) MGI
Ensembl
PMID:8978698 GO_REF:0000107 MGI:84613 NCBI chrNW_004936509:5,566,432...5,571,005
Ensembl chrNW_004936509:5,566,432...5,571,005
JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1353858|PMID:10700192) MGI
Ensembl
PMID:10700192 GO_REF:0000107 MGI:1353858 NCBI chrNW_004936504:1,535,629...1,757,386
Ensembl chrNW_004936504:1,535,624...1,757,435
JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1327513|PMID:9916808) MGI
Ensembl
PMID:9916808 GO_REF:0000107 MGI:1327513 NCBI chrNW_004936480:18,114,231...18,195,884
Ensembl chrNW_004936480:18,114,204...18,195,898
JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3056042|PMID:15328019) MGI
Ensembl
PMID:15328019 GO_REF:0000107 MGI:3056042 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689
JBrowse link
G Flvcr1 FLVCR heme transporter 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3775000|PMID:18258918) Ensembl
MGI
PMID:18258918 GO_REF:0000107 MGI:3775000 NCBI chrNW_004936557:693,445...727,166
Ensembl chrNW_004936557:692,489...726,965
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1095762|PMID:9268572) MGI
Ensembl
PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011
JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84613|PMID:8978698)
(MGI:2150573|PMID:11543619)
MGI
Ensembl
PMID:8978698 PMID:11543619 GO_REF:0000107 MGI:2150573 MGI:84613 NCBI chrNW_004936509:5,579,846...5,581,651
Ensembl chrNW_004936509:5,579,843...5,581,651
JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (MGI:86916|PMID:9097952) MGI PMID:9097952 MGI:86916 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077
JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5635784|PMID:24009529) MGI
Ensembl
PMID:24009529 GO_REF:0000107 MGI:5635784 NCBI chrNW_004936694:2,344,448...2,419,396
Ensembl chrNW_004936694:2,344,283...2,423,520
JBrowse link
G Iqce IQ motif containing E involved_in ISO (PMID:28488682) UniProt PMID:28488682 NCBI chrNW_004936823:340,959...389,593 JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (MGI:4461341|PMID:20589901) MGI PMID:20589901 MGI:4461341 NCBI chrNW_004936487:14,513,303...14,587,771
Ensembl chrNW_004936487:14,513,290...14,587,902
JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3653806|PMID:15537447) MGI
Ensembl
PMID:15537447 GO_REF:0000107 MGI:3653806 NCBI chrNW_004936599:1,746,309...1,814,471
Ensembl chrNW_004936599:1,746,406...1,814,321
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3653806|PMID:15537447)
(MGI:3055483|PMID:15469977)
MGI PMID:15469977 PMID:15537447 MGI:3055483 MGI:3653806 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191
JBrowse link
G Megf8 multiple EGF like domains 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:157,167...198,071
Ensembl chrNW_004936706:157,019...197,500
JBrowse link
G Nfia nuclear factor I A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:612,357...1,171,079
Ensembl chrNW_004936522:615,012...957,282
JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,779,398...3,798,074
Ensembl chrNW_004936524:3,779,392...3,798,501
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:4438783 NCBI chrNW_004936778:149,844...248,905
Ensembl chrNW_004936778:149,177...247,357
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:11,466,955...11,896,887
Ensembl chrNW_004936503:11,466,950...11,896,887
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5013998|PMID:21553379) MGI
Ensembl
PMID:21553379 GO_REF:0000107 MGI:5013998 NCBI chrNW_004936508:9,550,201...9,559,493
Ensembl chrNW_004936508:9,550,224...9,559,499
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255
JBrowse link
G Ptch1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476
JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3716248|PMID:17558409) MGI
Ensembl
PMID:17558409 GO_REF:0000107 MGI:3716248 NCBI chrNW_004936475:6,219,187...6,321,612
Ensembl chrNW_004936475:6,215,475...6,321,618
JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5316542|PMID:22318228) MGI
Ensembl
PMID:22318228 GO_REF:0000107 MGI:5316542 NCBI chrNW_004936542:2,119,423...2,357,533
Ensembl chrNW_004936542:2,117,349...2,357,539
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2653226|PMID:12668638) MGI
Ensembl
PMID:12668638 GO_REF:0000107 MGI:2653226 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361
JBrowse link
G Tbx4 T-box transcription factor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3527352|PMID:15621531) MGI
Ensembl
PMID:15621531 GO_REF:0000107 MGI:3527352 NCBI chrNW_004936490:2,823,531...2,853,282
Ensembl chrNW_004936490:2,827,416...2,852,917
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,835,397...8,922,403
Ensembl chrNW_004936491:8,833,285...8,922,711
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4413372|PMID:19795512) MGI
Ensembl
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159
JBrowse link
G Zic3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:9,780,895...9,792,865
Ensembl chrNW_004936513:9,786,709...9,793,077
JBrowse link
nail development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn1 forkhead box N1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5314697|PMID:21191399) MGI
Ensembl
PMID:21191399 GO_REF:0000107 MGI:5314697 NCBI chrNW_004936538:4,717,509...4,745,504
Ensembl chrNW_004936538:4,731,958...4,744,796
JBrowse link
G Hoxc13 homeobox C13 acts_upstream_of_or_within ISO (MGI:5314697|PMID:21191399) MGI PMID:21191399 MGI:5314697 NCBI chrNW_004936512:11,160,343...11,166,616 JBrowse link
G Itga6 integrin subunit alpha 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:2,508,446...2,587,643
Ensembl chrNW_004936509:2,508,375...2,587,669
JBrowse link
G Itgb4 integrin subunit beta 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:912,302...944,819
Ensembl chrNW_004936594:912,291...946,012
JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5779494|PMID:25340873) MGI
Ensembl
PMID:25340873 GO_REF:0000107 MGI:5779494 NCBI chrNW_004936668:1,153,791...1,165,469
Ensembl chrNW_004936668:1,152,929...1,165,576
JBrowse link
G Rspo4 R-spondin 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17805348) MGI
Ensembl
PMID:17805348 GO_REF:0000107 NCBI chrNW_004936485:17,618,044...17,650,852
Ensembl chrNW_004936485:17,618,034...17,650,852
JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5568807|PMID:24386478) MGI
Ensembl
PMID:24386478 GO_REF:0000107 MGI:5568807 NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (MGI:6101307|PMID:24770645) MGI PMID:24770645 MGI:6101307 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,835,397...8,922,403
Ensembl chrNW_004936491:8,833,285...8,922,711
JBrowse link
post-embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (MGI:5585386|PMID:24722207) MGI PMID:24722207 MGI:5585386 NCBI chrNW_004936492:6,160,979...6,657,491
Ensembl chrNW_004936492:6,289,517...6,659,465
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15022
    multicellular organismal process 7329
      multicellular organism development 4608
        appendage development 206
          limb development 206
            deltoid tuberosity development 3
            limb epidermis development + 2
            limb morphogenesis + 173
            nail development + 10
            pectoral fin development + 0
            pelvic fin development + 0
Path 2
Term Annotations click to browse term
  biological_process 15022
    developmental process 5970
      anatomical structure development 5637
        multicellular organism development 4608
          appendage development 206
            limb development 206
              deltoid tuberosity development 3
              limb epidermis development + 2
              limb morphogenesis + 173
              nail development + 10
              pectoral fin development + 0
              pelvic fin development + 0
paths to the root