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ONTOLOGY REPORT - ANNOTATIONS

Term:limb development
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Accession:GO:0060173 term browser browse the term
Definition:The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.
Synonyms:exact_synonym: paired limb/fin development
 narrow_synonym: limb bud development
 xref: Wikipedia:Limb_development


show annotations for term's descendants           Sort by:
limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARK2C arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5499270|PMID:23610558) MGI
Ensembl		 PMID:23610558 GO_REF:0000107 MGI:5499270 NCBI chr 1:95,951,387...96,072,522
Ensembl chr 1:95,950,746...96,066,928 		JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5439233|PMID:22867887) MGI
Ensembl		 PMID:22867887 GO_REF:0000107 MGI:5439233 NCBI chr 5:22,889,654...22,897,386
Ensembl chr 5:22,889,656...22,897,508 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5499270|PMID:23610558) MGI
Ensembl		 PMID:23610558 GO_REF:0000107 MGI:5499270 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:72,572,455...72,754,443
Ensembl chr 4:72,573,453...72,694,146 		JBrowse link
G COMP cartilage oligomeric matrix protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3723532|PMID:17588960)
(MGI:5550565|PMID:22006726)		 MGI
Ensembl		 PMID:17588960 PMID:22006726 GO_REF:0000107 MGI:3723532 MGI:5550565 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G CPLANE2 ciliogenesis and planar polarity effector complex subunit 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6107986|PMID:29038301) MGI
Ensembl		 PMID:29038301 GO_REF:0000107 MGI:6107986 NCBI chr 6:75,345,153...75,350,544
Ensembl chr 6:75,345,259...75,349,943 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:2450015|PMID:12569130) MGI PMID:12569130 MGI:2450015 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:3803396|PMID:18505822) UniProt PMID:18505822 MGI:3803396 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,288 		JBrowse link
G DMD dystrophin acts_upstream_of_or_within ISO (MGI:5515277|PMID:23798567) MGI PMID:23798567 MGI:5515277 NCBI chr  X:27,028,223...29,650,728
Ensembl chr  X:27,028,231...28,383,840 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within ISO (MGI:5502252|PMID:23863478) MGI PMID:23863478 MGI:5502252 NCBI chr15:24,402,605...24,408,377
Ensembl chr15:24,402,370...24,407,692 		JBrowse link
G FBXW4 F-box and WD repeat domain containing 4 acts_upstream_of_or_within ISO (MGI:76752|PMID:8666395)
(MGI:1278141|PMID:9733575), (MGI:76752|PMID:8666395)		 MGI PMID:8666395 PMID:9733575 MGI:1278141 MGI:76752 NCBI chr14:112,628,988...112,736,631
Ensembl chr14:112,638,204...112,736,056 		JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,519,681...182,606,890
Ensembl chr 1:182,519,684...182,606,869 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:1855908|PMID:10804187)
(PMID:21873635)		 MGI
Ensembl
GO_Central		 PMID:10804187 PMID:21873635 GO_REF:0000107 MGI:1855908 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FMN1 formin 1 acts_upstream_of_or_within ISO (MGI:56546|PMID:2997621) MGI PMID:2997621 MGI:56546 NCBI chr 1:136,696,353...137,163,532
Ensembl chr 1:136,704,090...137,065,258 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chr13:68,828,710...68,902,062
Ensembl chr13:68,828,719...68,902,060 		JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within ISO (MGI:5285455|PMID:21653639)
(MGI:4420527|PMID:19521792)
(MGI:3828200|PMID:18930042)		 MGI PMID:18930042 PMID:19521792 PMID:21653639 MGI:3828200 MGI:4420527 MGI:5285455 NCBI chr 3:111,683,674...111,718,504
Ensembl chr 3:111,683,669...111,718,970 		JBrowse link
G IFT80 intraflagellar transport 80 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5817320|PMID:26098911) MGI
Ensembl		 PMID:26098911 GO_REF:0000107 MGI:5817320 NCBI chr13:99,943,203...100,078,148
Ensembl chr13:99,943,208...100,078,148 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:5314314|PMID:22228099) MGI PMID:22228099 MGI:5314314 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,025,613 		JBrowse link
G INTU inturned planar cell polarity protein involved_in ISO (MGI:4441234|PMID:20067783) UniProt PMID:20067783 MGI:4441234 NCBI chr 8:97,123,062...97,204,659
Ensembl chr 8:97,123,065...97,204,650 		JBrowse link
G IRF6 interferon regulatory factor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3691407|PMID:17041601) MGI
Ensembl		 PMID:17041601 GO_REF:0000107 MGI:3691407 NCBI chr 9:133,164,360...133,184,045
Ensembl chr 9:133,164,440...133,185,628 		JBrowse link
G KREMEN1 kringle containing transmembrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,254,248...46,323,355
Ensembl chr14:46,254,326...46,323,354 		JBrowse link
G KREMEN2 kringle containing transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,214,251...39,218,805
Ensembl chr 3:39,214,248...39,218,776 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (MGI:5515277|PMID:23798567) MGI PMID:23798567 MGI:5515277
G LRP4 LDL receptor related protein 4 involved_in ISO (PMID:20381006) UniProt PMID:20381006 NCBI chr 2:15,616,137...15,672,876
Ensembl chr 2:15,616,131...15,672,874 		JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:69439|PMID:7957077) MGI
Ensembl		 PMID:7957077 GO_REF:0000107 MGI:69439 NCBI chr15:79,174,444...79,378,520
Ensembl chr15:79,173,033...79,380,993 		JBrowse link
G MED31 mediator complex subunit 31 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4459000|PMID:20347762) MGI
Ensembl		 PMID:20347762 GO_REF:0000107 MGI:4459000 NCBI chr12:50,728,681...50,734,469
Ensembl chr12:50,728,871...50,736,074 		JBrowse link
G MEOX2 mesenchyme homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1340181|PMID:10403250) MGI
Ensembl		 PMID:10403250 GO_REF:0000107 MGI:1340181 NCBI chr 9:84,945,178...85,009,939
Ensembl chr 9:84,943,199...85,010,157 		JBrowse link
G MIR124A-2 microRNA mir-124a-2 acts_upstream_of_or_within ISO (MGI:5303045|PMID:21857657) MGI PMID:21857657 MGI:5303045 NCBI chr14:13,201,425...13,201,509
Ensembl chr14:13,201,425...13,201,509 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in ISO (MGI:3513731|PMID:15572448) MGI PMID:15572448 MGI:3513731 NCBI chr 1:236,508,994...236,529,172
Ensembl chr 1:236,508,998...236,529,128 		JBrowse link
G PAM peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:9441675 RGD:2302426 NCBI chr 2:108,255,923...108,536,192
Ensembl chr 2:108,255,930...108,536,880 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G RARA retinoic acid receptor alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:69060|PMID:7607067) MGI
Ensembl		 PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,443...22,085,673 		JBrowse link
G RARG retinoic acid receptor gamma acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:69060|PMID:7607067) MGI
Ensembl		 PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G RAX retina and anterior neural fold homeobox acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:61293|PMID:13970082) MGI
Ensembl		 PMID:13970082 GO_REF:0000107 MGI:61293 NCBI chr 1:161,679,154...161,683,486
Ensembl chr 1:161,678,955...161,683,060 		JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5486592|PMID:23583643) MGI
Ensembl		 PMID:23583643 GO_REF:0000107 MGI:5486592 NCBI chr 1:263,769,403...263,822,101
Ensembl chr 1:263,772,173...263,822,104 		JBrowse link
G RSPO2 R-spondin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:29,415,774...29,577,890
Ensembl chr 4:29,414,752...29,579,674 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,025...33,748,704 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3841513|PMID:19223390) MGI PMID:19223390 MGI:3841513 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SLC39A1 solute carrier family 39 member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624433|PMID:16652366) MGI
Ensembl		 PMID:16652366 GO_REF:0000107 MGI:3624433 NCBI chr 4:95,729,480...95,733,824
Ensembl chr 4:95,729,347...95,733,819 		JBrowse link
G SLC39A3 solute carrier family 39 member 3 acts_upstream_of_or_within ISO (MGI:3624433|PMID:16652366) MGI PMID:16652366 MGI:3624433 NCBI chr 2:75,908,451...75,916,877 JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948153|PMID:21490221) MGI
Ensembl		 PMID:21490221 GO_REF:0000107 MGI:4948153 NCBI chr 8:88,608,083...88,690,589
Ensembl chr 8:88,608,174...88,687,250 		JBrowse link
G SMOC1 SPARC related modular calcium binding 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:93,480,064...93,628,332
Ensembl chr 7:93,480,159...93,628,328 		JBrowse link
G TAF10 TATA-box binding protein associated factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:3,144,262...3,145,702
Ensembl chr 9:3,144,277...3,145,720 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3841513|PMID:19223390) MGI
Ensembl		 PMID:19223390 GO_REF:0000107 MGI:3841513 NCBI chr 5:67,201,680...67,238,348
Ensembl chr 5:67,199,448...67,238,322 		JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:77,856,093...77,978,194
Ensembl chr 3:77,856,138...77,975,429 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3581932|PMID:15967824) MGI
Ensembl		 PMID:15967824 GO_REF:0000107 MGI:3581932 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,140 		JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3581932|PMID:15967824) MGI
Ensembl		 PMID:15967824 GO_REF:0000107 MGI:3581932 NCBI chr 3:45,156,791...45,202,996
Ensembl chr 3:45,160,155...45,201,186 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3608163|PMID:16245338) MGI
Ensembl		 PMID:16245338 GO_REF:0000107 MGI:3608163
deltoid tuberosity development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:3715390|PMID:17567668), (MGI:4418577|PMID:20059955) UniProt PMID:17567668 PMID:20059955 MGI:3715390 MGI:4418577 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX4 ALX homeobox 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1095777|PMID:9272948)
(MGI:1095762|PMID:9268572)		 MGI
Ensembl		 PMID:9268572 PMID:9272948 GO_REF:0000107 MGI:1095762 MGI:1095777 NCBI chr 2:18,070,726...18,085,685
Ensembl chr 2:18,037,401...18,085,683 		JBrowse link
G B9D1 B9 domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5300833|PMID:22179047) MGI
Ensembl		 PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chr12:60,162,656...60,171,586
Ensembl chr12:60,162,713...60,171,961 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1095762|PMID:9268572) MGI
Ensembl		 PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4430000|PMID:20043884) MGI
Ensembl		 PMID:20043884 GO_REF:0000107 MGI:4430000 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3799383|PMID:18539921) MGI
Ensembl		 PMID:18539921 GO_REF:0000107 MGI:3799383 NCBI chr 4:75,191,256...75,210,988
Ensembl chr 4:75,191,257...75,215,906 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr 9:8,393,610...8,512,843
Ensembl chr 9:8,393,612...8,512,848 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3767479|PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO (MGI:5648689|PMID:25877302) MGI PMID:25877302 MGI:5648689 NCBI chr16:22,381,001...22,501,052
Ensembl chr16:22,380,326...22,500,998 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:4430000|PMID:20043884)
(MGI:2670493|PMID:12923052)		 MGI PMID:12923052 PMID:20043884 MGI:2670493 MGI:4430000 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G ECE1 endothelin converting enzyme 1 involved_in ISO (PMID:9915973) BHF-UCL PMID:9915973 NCBI chr 6:79,408,322...79,465,827
Ensembl chr 6:79,408,326...79,466,152 		JBrowse link
G FBXW4 F-box and WD repeat domain containing 4 acts_upstream_of_or_within ISO (MGI:1278141|PMID:9733575)
(MGI:1344213|PMID:10471509)		 MGI PMID:9733575 PMID:10471509 MGI:1278141 MGI:1344213 NCBI chr14:112,628,988...112,736,631
Ensembl chr14:112,638,204...112,736,056 		JBrowse link
G FLVCR1 FLVCR heme transporter 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3775000|PMID:18258918) MGI
Ensembl		 PMID:18258918 GO_REF:0000107 MGI:3775000 NCBI chr 9:130,543,911...130,570,486
Ensembl chr 9:130,541,660...130,570,702 		JBrowse link
G FREM2 FRAS1 related extracellular matrix 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5646594|PMID:26234751) MGI
Ensembl		 PMID:26234751 GO_REF:0000107 MGI:5646594 NCBI chr11:13,775,267...14,116,377
Ensembl chr11:13,959,666...14,113,230 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (MGI:5912570|PMID:27158779)
(MGI:4367921|PMID:19877275)		 MGI PMID:19877275 PMID:27158779 MGI:4367921 MGI:5912570 NCBI chr 6:54,823,680...54,830,425
Ensembl chr 6:54,823,668...54,829,506 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940) MGI PMID:17504940 PMID:17504941 MGI:3710451 MGI:3710452 NCBI chr10:28,509,168...28,511,554
Ensembl chr10:28,509,261...28,510,301 		JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:3849919|PMID:19439426) MGI PMID:19439426 MGI:3849919 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,528...41,002,156 		JBrowse link
G GLI2 GLI family zinc finger 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3833793|PMID:19056373) MGI
Ensembl		 PMID:19056373 GO_REF:0000107 MGI:3833793 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5439039|PMID:22841643)
(MGI:3765370|PMID:17714700)
(MGI:1095762|PMID:9268572), (MGI:3692156|PMID:16254602), (MGI:3821634|PMID:19036983)		 MGI
Ensembl		 PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 GO_REF:0000107 MGI:1095762 MGI:3692156 MGI:3765370 MGI:3821634 MGI:5439039 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GNA12 G protein subunit alpha 12 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2182490|PMID:12077299) MGI
Ensembl		 PMID:12077299 GO_REF:0000107 MGI:2182490 NCBI chr 3:2,002,494...2,105,937
Ensembl chr 3:2,004,471...2,105,952 		JBrowse link
G GNAQ G protein subunit alpha q acts_upstream_of_or_within ISO (MGI:2182490|PMID:12077299) MGI PMID:12077299 MGI:2182490 NCBI chr 1:230,607,469...230,906,988
Ensembl chr 1:230,605,265...230,907,674 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4943100|PMID:21377456) MGI
Ensembl		 PMID:21377456 GO_REF:0000107 MGI:4943100 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2429440|PMID:12070084) MGI
Ensembl		 PMID:12070084 GO_REF:0000107 MGI:2429440 NCBI chr14:16,460,089...16,462,979
Ensembl chr14:16,459,971...16,462,207 		JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,411 		JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr 1:79,867,713...79,901,597
Ensembl chr 1:79,863,094...79,901,585 		JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2667742|PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXC11 homeobox C11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2667742|PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr 5:19,181,580...19,189,031
Ensembl chr 5:19,178,619...19,189,013 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760)
(MGI:3765370|PMID:17714700)
(MGI:83869|PMID:8900279)		 MGI PMID:8900279 PMID:12869760 PMID:17714700 MGI:2667742 MGI:3765370 MGI:83869 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HOXD12 homeobox D12 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:83869|PMID:8900279)
(MGI:3765370|PMID:17714700)		 MGI
Ensembl		 PMID:8900279 PMID:17714700 GO_REF:0000107 MGI:3765370 MGI:83869 NCBI chr15:81,900,962...81,902,327
Ensembl chr15:81,900,833...81,902,995 		JBrowse link
G HOXD13 homeobox D13 acts_upstream_of_or_within ISO (MGI:1097490|PMID:9342042)
(MGI:3765370|PMID:17714700)
(MGI:83869|PMID:8900279)		 MGI PMID:8900279 PMID:9342042 PMID:17714700 MGI:1097490 MGI:3765370 MGI:83869 NCBI chr15:81,893,997...81,897,965
Ensembl chr15:81,893,972...81,896,944 		JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chr13:68,828,710...68,902,062
Ensembl chr13:68,828,719...68,902,060 		JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within ISO (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chr 3:40,309,298...40,372,139
Ensembl chr 3:40,309,635...40,372,135 		JBrowse link
G IFT52 intraflagellar transport 52 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3579954|PMID:15930098) MGI
Ensembl		 PMID:15930098 GO_REF:0000107 MGI:3579954 NCBI chr17:46,209,956...46,246,696
Ensembl chr17:46,210,150...46,246,674 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:3821634|PMID:19036983)
(MGI:2660994|PMID:12701101), (MGI:3692156|PMID:16254602)
(MGI:3577662|PMID:15755804), (MGI:3579954|PMID:15930098)
(MGI:3579954|PMID:15930098)		 MGI PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 MGI:2660994 MGI:3577662 MGI:3579954 MGI:3692156 MGI:3821634 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,025,613 		JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4822496|PMID:20660756) MGI
Ensembl		 PMID:20660756 GO_REF:0000107 MGI:4822496 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G INTU inturned planar cell polarity protein acts_upstream_of_or_within
involved_in		 ISO (MGI:5644615|PMID:25774014)
(PMID:27158779)		 MGI
GO_Central		 PMID:25774014 PMID:27158779 MGI:5644615 NCBI chr 8:97,123,062...97,204,659
Ensembl chr 8:97,123,065...97,204,650 		JBrowse link
G LMBR1 limb development membrane protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151954|PMID:11606546) MGI
Ensembl		 PMID:11606546 GO_REF:0000107 MGI:2151954 NCBI chr18:1,795,462...1,934,951
Ensembl chr18:1,795,497...1,934,947 		JBrowse link
G LNPK lunapark, ER junction formation factor acts_upstream_of_or_within ISO (MGI:1097490|PMID:9342042) MGI PMID:9342042 MGI:1097490 NCBI chr15:81,721,637...81,805,706
Ensembl chr15:81,721,644...81,805,680 		JBrowse link
G LRP4 LDL receptor related protein 4 acts_upstream_of_or_within ISO (MGI:3623169|PMID:16517118) MGI PMID:16517118 MGI:3623169 NCBI chr 2:15,616,137...15,672,876
Ensembl chr 2:15,616,131...15,672,874 		JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3045836|PMID:15142971) MGI
Ensembl		 PMID:15142971 GO_REF:0000107 MGI:3045836 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,614...4,653,944 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3045836|PMID:15142971)
(MGI:4413372|PMID:19795512)		 MGI PMID:15142971 PMID:19795512 MGI:3045836 MGI:4413372 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5771618|PMID:26755636) MGI
Ensembl		 PMID:26755636 GO_REF:0000107 MGI:5771618 NCBI chr15:79,174,444...79,378,520
Ensembl chr15:79,173,033...79,380,993 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4367169|PMID:19776033)
(MGI:5487695|PMID:23454480)
(MGI:4868517|PMID:21045211)		 MGI
Ensembl		 PMID:19776033 PMID:21045211 PMID:23454480 GO_REF:0000107 MGI:4367169 MGI:4868517 MGI:5487695 NCBI chr12:34,499,139...34,512,191
Ensembl chr12:34,499,142...34,512,187 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948979|PMID:21465616) MGI
Ensembl		 PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3790402|PMID:17360777) MGI PMID:17360777 MGI:3790402 NCBI chr 3:121,543,201...121,549,678
Ensembl chr 3:121,543,109...121,549,046 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G RAB23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804) MGI PMID:9636176 PMID:15755804 MGI:1267118 MGI:3577662 NCBI chr 7:28,632,065...28,658,958
Ensembl chr 7:28,632,082...28,658,952 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (MGI:4822496|PMID:20660756) MGI PMID:20660756 MGI:4822496 NCBI chr14:2,803,840...3,035,384
Ensembl chr14:2,804,061...3,035,296 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,025...33,748,704 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3806414|PMID:18729207) MGI
Ensembl		 PMID:18729207 GO_REF:0000107 MGI:3806414 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940)
(MGI:5559673|PMID:11044396)
(MGI:3579954|PMID:15930098)
(MGI:3039193|PMID:15075292), (MGI:4822496|PMID:20660756)		 MGI
Roslin_Institute		 PMID:11044396 PMID:15075292 PMID:15930098 PMID:17504940 PMID:17504941 More... MGI:3039193 MGI:3579954 MGI:3710451 MGI:3710452 MGI:4822496 MGI:5559673 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G TBC1D32 TBC1 domain family member 32 acts_upstream_of_or_within ISO (MGI:4439200|PMID:20159594) MGI PMID:20159594 MGI:4439200 NCBI chr 1:41,057,782...41,265,416
Ensembl chr 1:41,057,838...41,265,375 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,878,662...36,887,513
Ensembl chr12:36,878,675...36,887,513 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5532232|PMID:23844108) MGI
Ensembl		 PMID:23844108 GO_REF:0000107 MGI:5532232 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TMEM107 transmembrane protein 107 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,394,500...53,397,064
Ensembl chr12:53,393,332...53,397,064 		JBrowse link
G TMEM231 transmembrane protein 231 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5300833|PMID:22179047) MGI
Ensembl		 PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chr 6:12,140,317...12,163,894
Ensembl chr 6:12,140,687...12,164,140 		JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chr15:137,863,612...137,912,325
Ensembl chr15:137,863,609...137,912,477 		JBrowse link
G TTBK2 tau tubulin kinase 2 acts_upstream_of_or_within ISO (MGI:5493390|PMID:23141541) MGI PMID:23141541 MGI:5493390 NCBI chr 1:128,489,676...128,640,094
Ensembl chr 1:128,489,744...128,635,511 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3841503|PMID:19286674), (MGI:3844764|PMID:19334287) MGI
Ensembl		 PMID:19286674 PMID:19334287 GO_REF:0000107 MGI:3841503 MGI:3844764 NCBI chr 5:67,201,680...67,238,348
Ensembl chr 5:67,199,448...67,238,322 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3042355|PMID:15030764) MGI
Ensembl		 PMID:15030764 GO_REF:0000107 MGI:3042355 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 ISO (PMID:27158779)
(MGI:5544506|PMID:24302887)		 GO_Central
MGI		 PMID:24302887 PMID:27158779 MGI:5544506 NCBI chr 3:78,435,154...78,726,313
Ensembl chr 3:78,268,922...78,856,893 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4413372|PMID:19795512) MGI
Ensembl		 PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 ISO RGD PMID:19191224 RGD:2312786 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3046038|PMID:15069081), (MGI:4422129|PMID:20034106) MGI
Ensembl		 PMID:15069081 PMID:20034106 GO_REF:0000107 MGI:3046038 MGI:4422129 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,932,739...114,037,046 		JBrowse link
G ALX3 ALX homeobox 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151109|PMID:11641221) MGI
Ensembl		 PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chr 4:110,047,254...110,058,205
Ensembl chr 4:110,047,116...110,057,872 		JBrowse link
G ALX4 ALX homeobox 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151109|PMID:11641221) MGI
Ensembl		 PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chr 2:18,070,726...18,085,685
Ensembl chr 2:18,037,401...18,085,683 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) BHF-UCL PMID:15454078 NCBI chr 5:69,016,954...69,448,428
Ensembl chr 5:69,275,176...69,448,430 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:71462|PMID:7720575) MGI
Ensembl		 PMID:7720575 GO_REF:0000107 MGI:71462 NCBI chr 4:93,388,198...93,393,861
Ensembl chr 4:93,388,092...93,394,155 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within ISO (MGI:1194987|PMID:9362463) MGI PMID:9362463 MGI:1194987 NCBI chr15:24,402,605...24,408,377
Ensembl chr15:24,402,370...24,407,692 		JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5462316|PMID:22916278) MGI
Ensembl		 PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXA13 homeobox A13 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3530958|PMID:15733672) MGI
Ensembl		 PMID:15733672 GO_REF:0000107 MGI:3530958 NCBI chr18:45,373,340...45,379,046
Ensembl chr18:45,373,440...45,376,325 		JBrowse link
G HOXA9 homeobox A9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:78984|PMID:8625797) MGI
Ensembl		 PMID:8625797 GO_REF:0000107 MGI:78984 NCBI chr18:45,404,594...45,411,512
Ensembl chr18:45,408,375...45,411,509 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:78984|PMID:8625797) MGI
Ensembl		 PMID:8625797 GO_REF:0000107 MGI:78984 NCBI chr15:81,910,415...81,926,276
Ensembl chr15:81,924,142...81,926,274 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chr13:68,828,710...68,902,062
Ensembl chr13:68,828,719...68,902,060 		JBrowse link
G LNPK lunapark, ER junction formation factor acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278)
(MGI:1097490|PMID:9342042)		 MGI PMID:9342042 PMID:22916278 MGI:1097490 MGI:5462316 NCBI chr15:81,721,637...81,805,706
Ensembl chr15:81,721,644...81,805,680 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3774879|PMID:18256198)
(MGI:3578068|PMID:15880584)
(MGI:4413396|PMID:19653321)
(MGI:1891551|PMID:11029008)		 MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 MGI:1891551 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chr13:107,753,207...108,336,136
Ensembl chr13:107,754,482...108,335,702 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948979|PMID:21465616) MGI
Ensembl		 PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,469...22,363,821 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G RDH10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:3709664 NCBI chr 4:62,569,877...62,600,981
Ensembl chr 4:62,569,885...62,601,439 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5424521|PMID:23213437) MGI
Ensembl		 PMID:23213437 GO_REF:0000107 MGI:5424521 NCBI chr 1:236,821,243...236,898,280
Ensembl chr 1:236,821,414...236,898,276 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3715393|PMID:17553904) MGI
Ensembl		 PMID:17553904 GO_REF:0000107 MGI:3715393 NCBI chr 6:31,564,937...31,660,540
Ensembl chr 6:31,564,986...31,661,190 		JBrowse link
G RSPO2 R-spondin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3774879|PMID:18256198) MGI
Ensembl		 PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chr 4:29,415,774...29,577,890
Ensembl chr 4:29,414,752...29,579,674 		JBrowse link
G RUNX2 RUNX family transcription factor 2 acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1928592|PMID:11118883), (MGI:2149276|PMID:11476582) MGI PMID:11118883 PMID:11476582 MGI:1928592 MGI:2149276 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SHOX2 short stature homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5462316|PMID:22916278) MGI
Ensembl		 PMID:22916278 GO_REF:0000107 MGI:5462316 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TBX5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2150876|PMID:11572777), (MGI:2448173|PMID:12490567) MGI
Ensembl		 PMID:11572777 PMID:12490567 GO_REF:0000107 MGI:2150876 MGI:2448173 NCBI chr14:37,772,205...37,826,015
Ensembl chr14:37,774,171...37,825,401 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5824492|PMID:25503409) Ensembl
MGI		 PMID:25503409 GO_REF:0000107 MGI:5824492 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,105...127,347,068 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2180404|PMID:12175489) MGI
Ensembl		 PMID:12175489 GO_REF:0000107 MGI:2180404 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1194987|PMID:9362463)
(MGI:3578068|PMID:15880584)		 MGI
Ensembl		 PMID:9362463 PMID:15880584 GO_REF:0000107 MGI:1194987 MGI:3578068 MGI:48652 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chr 2:51,102,757...51,128,346
Ensembl chr 2:51,102,763...51,128,346 		JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF3 ALF transcription elongation factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:54,135,476...54,730,201
Ensembl chr 3:54,135,532...54,727,885 		JBrowse link
G ALX3 ALX homeobox 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151109|PMID:11641221) MGI
Ensembl		 PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chr 4:110,047,254...110,058,205
Ensembl chr 4:110,047,116...110,057,872 		JBrowse link
G ALX4 ALX homeobox 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151109|PMID:11641221) MGI
Ensembl		 PMID:11641221 GO_REF:0000107 MGI:2151109 NCBI chr 2:18,070,726...18,085,685
Ensembl chr 2:18,037,401...18,085,683 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1889107|PMID:10964473) MGI
Ensembl		 PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3611161|PMID:16207732) MGI
Ensembl		 PMID:16207732 GO_REF:0000107 MGI:3611161 NCBI chr 4:72,572,455...72,754,443
Ensembl chr 4:72,573,453...72,694,146 		JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3773938|PMID:18231602)
(MGI:2670493|PMID:12923052)		 MGI PMID:12923052 PMID:18231602 MGI:2670493 MGI:3773938 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3609457|PMID:16319892) MGI PMID:16319892 MGI:3609457 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224 		JBrowse link
G FGF4 fibroblast growth factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3608165|PMID:16245339) MGI
Ensembl		 PMID:16245339 GO_REF:0000107 MGI:3608165 NCBI chr 2:3,527,113...3,529,011
Ensembl chr 2:3,526,914...3,529,874 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3608165|PMID:16245339) MGI
Ensembl		 PMID:16245339 GO_REF:0000107 MGI:3608165 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G GNAS GNAS complex locus acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3619837|PMID:15797856) MGI
Ensembl		 PMID:15797856 GO_REF:0000107 MGI:3619837 NCBI chr17:58,985,580...59,053,022
Ensembl chr17:58,998,981...59,053,021 		JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1889107|PMID:10964473) MGI
Ensembl		 PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr  X:109,536,495...109,973,605
Ensembl chr  X:109,536,504...109,973,607 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413396|PMID:19653321)
(MGI:3578068|PMID:15880584)
(MGI:3774879|PMID:18256198)		 MGI PMID:15880584 PMID:18256198 PMID:19653321 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chr13:107,753,207...108,336,136
Ensembl chr13:107,754,482...108,335,702 		JBrowse link
G MED1 mediator complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2682174|PMID:14500757) MGI
Ensembl		 PMID:14500757 GO_REF:0000107 MGI:2682174 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,841,205...22,872,409 		JBrowse link
G MMP13 matrix metallopeptidase 13 ISO RGD PMID:11850435 RGD:1582550 NCBI chr 9:33,549,003...33,616,700
Ensembl chr 9:33,549,008...33,561,162 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948979|PMID:21465616) MGI
Ensembl		 PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3608163|PMID:16245338) MGI
Ensembl		 PMID:16245338 GO_REF:0000107 MGI:3608163
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G PITX1 paired like homeodomain 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3773938|PMID:18231602) MGI
Ensembl		 PMID:18231602 GO_REF:0000107 MGI:3773938 NCBI chr 2:137,200,424...137,212,500
Ensembl chr 2:137,200,423...137,206,979 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:3773938|PMID:18231602) MGI PMID:18231602 MGI:3773938 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
G RARB retinoic acid receptor beta acts_upstream_of_or_within ISO (MGI:1334064|PMID:10075839) MGI PMID:10075839 MGI:1334064 NCBI chr13:12,336,387...12,507,688
Ensembl chr13:12,336,972...12,507,680 		JBrowse link
G RARG retinoic acid receptor gamma acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1334064|PMID:10075839) MGI
Ensembl		 PMID:10075839 GO_REF:0000107 MGI:1334064 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3715393|PMID:17553904) MGI
Ensembl		 PMID:17553904 GO_REF:0000107 MGI:3715393 NCBI chr 6:31,564,937...31,660,540
Ensembl chr 6:31,564,986...31,661,190 		JBrowse link
G RSPO2 R-spondin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3774879|PMID:18256198) MGI
Ensembl		 PMID:18256198 GO_REF:0000107 MGI:3774879 NCBI chr 4:29,415,774...29,577,890
Ensembl chr 4:29,414,752...29,579,674 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1928592|PMID:11118883) MGI PMID:11118883 MGI:1928592 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3604915|PMID:16192310) MGI PMID:16192310 MGI:3604915 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,295 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5532232|PMID:23844108) MGI
Ensembl		 PMID:23844108 GO_REF:0000107 MGI:5532232 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TBX4 T-box transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,803,355...36,830,321
Ensembl chr12:36,802,354...36,834,327 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5824492|PMID:25503409) Ensembl
MGI		 PMID:25503409 GO_REF:0000107 MGI:5824492 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,105...127,347,068 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3578068|PMID:15880584) MGI
Ensembl		 PMID:15880584 GO_REF:0000107 MGI:3578068 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:1859075|PMID:10835630) RGD
Ensembl
MGI		 PMID:10835630 PMID:19191224 GO_REF:0000107 MGI:1859075 RGD:2312786 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3526782|PMID:15537664) MGI
Ensembl		 PMID:15537664 GO_REF:0000107 MGI:3526782 NCBI chr 6:28,277,649...28,280,409
Ensembl chr 6:28,277,614...28,280,405 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2681052|PMID:14623241) MGI
Ensembl		 PMID:14623241 GO_REF:0000107 MGI:2681052 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,932,739...114,037,046 		JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (MGI:1314705|PMID:9847249) MGI PMID:9847249 MGI:1314705 NCBI chr 5:96,761,683...96,785,125
Ensembl chr 5:96,763,685...96,785,165 		JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1270933|PMID:9664686) MGI
Ensembl		 PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMP7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1270933|PMID:9664686) MGI
Ensembl		 PMID:9664686 GO_REF:0000107 MGI:1270933 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr 9:8,393,610...8,512,843
Ensembl chr 9:8,393,612...8,512,848 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3767479|PMID:16079159) MGI
Ensembl		 PMID:16079159 GO_REF:0000107 MGI:3767479 NCBI chr 5:79,788,558...80,068,903
Ensembl chr 5:79,788,572...80,067,795 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3037623|PMID:15030763) MGI
Ensembl		 PMID:15030763 GO_REF:0000107 MGI:3037623 NCBI chr 3:70,573,551...70,593,416
Ensembl chr 3:70,572,197...70,593,408 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3588609|PMID:16040801) MGI PMID:16040801 MGI:3588609 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (MGI:3052394|PMID:15242796) MGI PMID:15242796 MGI:3052394 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,288 		JBrowse link
G DLX5 distal-less homeobox 5 acts_upstream_of_or_within ISO (MGI:2181241|PMID:12112878)
(MGI:3794467|PMID:18326838)		 MGI PMID:12112878 PMID:18326838 MGI:2181241 MGI:3794467 NCBI chr 9:76,639,915...76,643,689
Ensembl chr 9:76,639,561...76,643,884 		JBrowse link
G DLX6 distal-less homeobox 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2181241|PMID:12112878)
(MGI:3794467|PMID:18326838)		 MGI
Ensembl		 PMID:12112878 PMID:18326838 GO_REF:0000107 MGI:2181241 MGI:3794467 NCBI chr 9:76,623,489...76,630,296
Ensembl chr 9:76,625,117...76,630,275 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3610248|PMID:16229832) MGI
Ensembl		 PMID:16229832 GO_REF:0000107 MGI:3610248 NCBI chr 9:33,720,920...34,039,954
Ensembl chr 9:33,720,877...34,040,188 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within
involved_in		 ISO (MGI:81767|PMID:8684466)
(MGI:75252|PMID:7624797)
(MGI:3052394|PMID:15242796)		 MGI
ParkinsonsUK-UCL		 PMID:7624797 PMID:8684466 PMID:15242796 MGI:3052394 MGI:75252 MGI:81767 NCBI chr15:24,402,605...24,408,377
Ensembl chr15:24,402,370...24,407,692 		JBrowse link
G FBN2 fibrillin 2 acts_upstream_of_or_within ISO (MGI:1934650|PMID:11350121)
(MGI:1933664|PMID:11285249)		 MGI PMID:11285249 PMID:11350121 MGI:1933664 MGI:1934650 NCBI chr 2:131,150,665...131,370,241
Ensembl chr 2:131,152,127...131,370,881 		JBrowse link
G FGF4 fibroblast growth factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3056042|PMID:15328019) MGI
Ensembl		 PMID:15328019 GO_REF:0000107 MGI:3056042 NCBI chr 2:3,527,113...3,529,011
Ensembl chr 2:3,526,914...3,529,874 		JBrowse link
G FGF9 fibroblast growth factor 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3714711|PMID:17576930) MGI
Ensembl		 PMID:17576930 GO_REF:0000107 MGI:3714711 NCBI chr11:1,554,648...1,581,938
Ensembl chr11:1,554,763...1,582,408 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3608262|PMID:16207751) MGI PMID:16207751 MGI:3608262 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within ISO (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chr 8:73,502,368...73,959,454
Ensembl chr 8:73,502,717...73,957,375 		JBrowse link
G GDF5 growth differentiation factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3513212|PMID:15542031) MGI
Ensembl		 PMID:15542031 GO_REF:0000107 MGI:3513212 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G GJA5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (MGI:3581374|PMID:15923624) MGI PMID:15923624 MGI:3581374 NCBI chr 4:99,854,129...99,871,288
Ensembl chr 4:99,854,392...99,871,286 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3608261|PMID:16284117)
(MGI:3851667|PMID:19422820)
(MGI:2384366|PMID:12142027), (MGI:2445242|PMID:12435361), (MGI:2445270|PMID:12435627), (MGI:4367286|PMID:19809516), (MGI:52587|PMID:8387379)		 MGI
Ensembl		 PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... GO_REF:0000107 MGI:2384366 MGI:2445242 MGI:2445270 MGI:3608261 MGI:3851667 MGI:4367286 MGI:52587 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2665160|PMID:12808456) MGI
Ensembl		 PMID:12808456 GO_REF:0000107 MGI:2665160 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G HNF1A HNF1 homeobox A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1334099|PMID:10090727) MGI
Ensembl		 PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chr14:40,868,819...40,888,322
Ensembl chr14:40,868,676...40,888,328 		JBrowse link
G HOXA10 homeobox A10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2667742|PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr18:45,393,525...45,403,259
Ensembl chr18:45,393,885...45,403,257 		JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3043491|PMID:14668414) MGI
Ensembl		 PMID:14668414 GO_REF:0000107 MGI:3043491 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,375...45,391,953 		JBrowse link
G HOXC10 homeobox C10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2667742|PMID:12869760) MGI
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr 5:19,197,810...19,202,975
Ensembl chr 5:19,197,807...19,202,970 		JBrowse link
G HOXD10 homeobox D10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2667742|PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr15:81,911,372...81,921,164
Ensembl chr15:81,917,637...81,921,461 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:3043491 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,911,282 		JBrowse link
G HOXD13 homeobox D13 acts_upstream_of_or_within ISO (MGI:2177382|PMID:11850178) MGI PMID:11850178 MGI:2177382 NCBI chr15:81,893,997...81,897,965
Ensembl chr15:81,893,972...81,896,944 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1334099|PMID:10090727) MGI
Ensembl		 PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chr 8:113,824,511...113,944,078
Ensembl chr 8:113,825,161...113,944,070 		JBrowse link
G LRP4 LDL receptor related protein 4 acts_upstream_of_or_within ISO (MGI:3619629|PMID:16207730)
(MGI:3703100|PMID:17119023)		 MGI PMID:16207730 PMID:17119023 MGI:3619629 MGI:3703100 NCBI chr 2:15,616,137...15,672,876
Ensembl chr 2:15,616,131...15,672,874 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4458999|PMID:20359476) MGI PMID:20359476 MGI:4458999 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MBNL1 muscleblind like splicing regulator 1 involved_in ISO (MGI:2675975|PMID:12915312) UniProt PMID:12915312 MGI:2675975 NCBI chr13:92,491,778...92,696,235
Ensembl chr13:92,491,808...92,696,230 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISO (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3851667|PMID:19422820)
(MGI:3580732|PMID:15930102)		 MGI
Ensembl		 PMID:15930102 PMID:19422820 GO_REF:0000107 MGI:3580732 MGI:3851667 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:3580732|PMID:15930102)
(MGI:3851667|PMID:19422820)		 MGI PMID:15930102 PMID:19422820 MGI:3580732 MGI:3851667 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3610505|PMID:16169548) MGI
Ensembl		 PMID:16169548 GO_REF:0000107 MGI:3610505
G NOTCH2 notch receptor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3610505|PMID:16169548) MGI
Ensembl		 PMID:16169548 GO_REF:0000107 MGI:3610505 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,981,636...101,150,195 		JBrowse link
G PBX1 PBX homeobox 1 acts_upstream_of_or_within ISO (MGI:3629247|PMID:16672333) MGI PMID:16672333 MGI:3629247 NCBI chr 4:85,824,590...86,170,328
Ensembl chr 4:85,824,666...86,170,191 		JBrowse link
G PBX2 PBX homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3629247|PMID:16672333) MGI
Ensembl		 PMID:16672333 GO_REF:0000107 MGI:3629247 NCBI chr 7:24,221,565...24,226,940
Ensembl chr 7:24,221,565...24,226,940 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G PRRX1 paired related homeobox 1 acts_upstream_of_or_within ISO (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI PMID:9729491 PMID:9882503 MGI:1306737 MGI:1328643 NCBI chr 4:80,427,682...80,502,689
Ensembl chr 4:80,427,687...80,501,646 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI PMID:9729491 PMID:9882503 MGI:1306737 MGI:1328643 NCBI chr 1:269,853,134...269,902,808
Ensembl chr 1:269,853,200...269,903,469 		JBrowse link
G PSEN1 presenilin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3610505|PMID:16169548) MGI
Ensembl		 PMID:16169548 GO_REF:0000107 MGI:3610505 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr10:14,532,556...14,561,862
Ensembl chr10:14,532,767...14,577,251 		JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2152606|PMID:11784021)
(MGI:2135419|PMID:11389830)		 MGI
Ensembl		 PMID:11389830 PMID:11784021 GO_REF:0000107 MGI:2135419 MGI:2152606 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,425...26,703,223 		JBrowse link
G SALL4 spalt like transcription factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3614736|PMID:16380715) MGI
Ensembl		 PMID:16380715 GO_REF:0000107 MGI:3614736 NCBI chr17:53,082,610...53,103,023
Ensembl chr17:53,084,310...53,103,190 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:2135419|PMID:11389830)
(MGI:3851667|PMID:19422820)
(MGI:3053241|PMID:15315763)		 MGI PMID:11389830 PMID:15315763 PMID:19422820 MGI:2135419 MGI:3053241 MGI:3851667 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SHOX2 short stature homeobox 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3621617|PMID:16537395)
(MGI:3714677|PMID:17481601)		 MGI
Ensembl		 PMID:16537395 PMID:17481601 GO_REF:0000107 MGI:3621617 MGI:3714677 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:2445270|PMID:12435627) MGI PMID:12435627 MGI:2445270 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G SP8 Sp8 transcription factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2679409|PMID:14597661) MGI
Ensembl		 PMID:14597661 GO_REF:0000107 MGI:2679409 NCBI chr 9:89,764,671...89,767,428
Ensembl chr 9:89,764,764...89,767,393 		JBrowse link
G SP9 Sp9 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:80,325,449...80,328,111
Ensembl chr15:80,325,377...80,329,020 		JBrowse link
G TBX4 T-box transcription factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2660720|PMID:12736212) MGI
Ensembl		 PMID:12736212 GO_REF:0000107 MGI:2660720 NCBI chr12:36,803,355...36,830,321
Ensembl chr12:36,802,354...36,834,327 		JBrowse link
G TBX5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3614736|PMID:16380715)
(MGI:2660722|PMID:12736217)		 MGI
Ensembl		 PMID:12736217 PMID:16380715 GO_REF:0000107 MGI:2660722 MGI:3614736 NCBI chr14:37,772,205...37,826,015
Ensembl chr14:37,774,171...37,825,401 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1335634|PMID:10227293)
(MGI:3794467|PMID:18326838)		 MGI
Ensembl		 PMID:10227293 PMID:18326838 GO_REF:0000107 MGI:1335634 MGI:3794467 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,105...127,347,068 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2384366|PMID:12142027)
(MGI:1934650|PMID:11350121)
(MGI:3042355|PMID:15030764)		 MGI
Ensembl		 PMID:11350121 PMID:12142027 PMID:15030764 GO_REF:0000107 MGI:1934650 MGI:2384366 MGI:3042355 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5314316|PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 MGI:5314316 NCBI chr 8:30,453,969...30,553,699
Ensembl chr 8:30,463,862...30,553,703 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1329804|PMID:10021340) MGI
Ensembl		 PMID:10021340 GO_REF:0000107 MGI:1329804 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3052394|PMID:15242796) MGI
Ensembl		 PMID:15242796 GO_REF:0000107 MGI:3052394 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI MGI:61278 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5499279|PMID:23439395) MGI
Ensembl		 PMID:23439395 GO_REF:0000107 MGI:5499279 NCBI chr 4:33,811,159...33,844,556
Ensembl chr 4:33,809,809...33,844,656 		JBrowse link
G MSX1 msh homeobox 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4948979|PMID:21465616) MGI
Ensembl		 PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr 8:5,628,381...5,632,375
Ensembl chr 8:5,628,380...5,632,607 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in ISO (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARK2C arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5499270|PMID:23610558) MGI
Ensembl		 PMID:23610558 GO_REF:0000107 MGI:5499270 NCBI chr 1:95,951,387...96,072,522
Ensembl chr 1:95,950,746...96,066,928 		JBrowse link
G FMN1 formin 1 acts_upstream_of_or_within ISO (MGI:3717025|PMID:17554679) MGI PMID:17554679 MGI:3717025 NCBI chr 1:136,696,353...137,163,532
Ensembl chr 1:136,704,090...137,065,258 		JBrowse link
G GDF5 growth differentiation factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:65616|PMID:8145850) MGI
Ensembl		 PMID:8145850 GO_REF:0000107 MGI:65616 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350864|PMID:10642795) MGI
Ensembl		 PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr15:81,911,372...81,921,164
Ensembl chr15:81,917,637...81,921,461 		JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350864|PMID:10642795) MGI
Ensembl		 PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr15:81,910,415...81,926,276
Ensembl chr15:81,924,142...81,926,274 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,469...22,363,821 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,025...33,748,704 		JBrowse link
G SALL3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr 1:146,251,591...146,273,778
Ensembl chr 1:146,252,155...146,273,906 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9207801) MGI
Ensembl		 PMID:9207801 GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TBX5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3527352|PMID:15621531)
(PMID:8988164), (PMID:8988165)		 MGI
Ensembl		 PMID:8988164 PMID:8988165 PMID:15621531 GO_REF:0000107 MGI:3527352 NCBI chr14:37,772,205...37,826,015
Ensembl chr14:37,774,171...37,825,401 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1313057|PMID:9811866) MGI PMID:9811866 MGI:1313057 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:44,745,653...44,774,563
Ensembl chr 7:44,745,827...44,770,606 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO MGI MGI:48652 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1859075|PMID:10835630) MGI
Ensembl		 PMID:10835630 GO_REF:0000107 MGI:1859075 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI MGI:61157 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3621084|PMID:16556916) MGI
Ensembl		 PMID:16556916 GO_REF:0000107 MGI:3621084 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G FMN1 formin 1 acts_upstream_of_or_within ISO (MGI:3717025|PMID:17554679) MGI PMID:17554679 MGI:3717025 NCBI chr 1:136,696,353...137,163,532
Ensembl chr 1:136,704,090...137,065,258 		JBrowse link
G GDF5 growth differentiation factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:65616|PMID:8145850)
(MGI:3722565|PMID:17085896)		 MGI
Ensembl		 PMID:8145850 PMID:17085896 GO_REF:0000107 MGI:3722565 MGI:65616 NCBI chr17:38,792,854...38,796,806
Ensembl chr17:38,792,187...38,797,005 		JBrowse link
G HOXD10 homeobox D10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350864|PMID:10642795) MGI
Ensembl		 PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr15:81,911,372...81,921,164
Ensembl chr15:81,917,637...81,921,461 		JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350864|PMID:10642795) MGI
Ensembl		 PMID:10642795 GO_REF:0000107 MGI:1350864 NCBI chr15:81,910,415...81,926,276
Ensembl chr15:81,924,142...81,926,274 		JBrowse link
G PITX1 paired like homeodomain 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1333095|PMID:10101115)
(MGI:3527352|PMID:15621531), (MGI:3689784|PMID:16989801)
(MGI:1332284|PMID:10049363)		 MGI
Ensembl		 PMID:10049363 PMID:10101115 PMID:15621531 PMID:16989801 GO_REF:0000107 MGI:1332284 MGI:1333095 MGI:3527352 MGI:3689784 NCBI chr 2:137,200,424...137,212,500
Ensembl chr 2:137,200,423...137,206,979 		JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1095757|PMID:9262482) MGI
Ensembl		 PMID:9262482 GO_REF:0000107 MGI:1095757 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,425...26,703,223 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,025...33,748,704 		JBrowse link
G SALL3 spalt like transcription factor 3 acts_upstream_of_or_within ISO (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr 1:146,251,591...146,273,778
Ensembl chr 1:146,252,155...146,273,906 		JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:44,745,653...44,774,563
Ensembl chr 7:44,745,827...44,770,606 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1353858|PMID:10700192) MGI
Ensembl		 PMID:10700192 GO_REF:0000107 MGI:1353858 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO MGI MGI:48652 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1859075|PMID:10835630) MGI
Ensembl		 PMID:10835630 GO_REF:0000107 MGI:1859075 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1309706|PMID:9784490) MGI
Ensembl		 PMID:9784490 GO_REF:0000107 MGI:1309706 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in		 ISO
ISS		 (MGI:1346744|PMID:10518547)
(MGI:1197797|PMID:9435295)		 MGI
UniProt		 PMID:9435295 PMID:10518547 GO_REF:0000024 MGI:1197797 MGI:1346744 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G PLXNA2 plexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:134,584,760...134,800,471
Ensembl chr 9:134,584,406...134,796,063 		JBrowse link
G SEMA3C semaphorin 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:99,114,649...99,432,683
Ensembl chr 9:99,251,715...99,433,224 		JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1928592|PMID:11118883) MGI PMID:11118883 MGI:1928592 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G ZNF219 zinc finger protein 219 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:78,028,560...78,043,491
Ensembl chr 7:78,035,228...78,043,464 		JBrowse link
limb epidermis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDF1 keratinocyte differentiation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:84,254,493...84,265,112
Ensembl chr 6:84,254,499...84,265,041 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1861161|PMID:10854042) Ensembl
UniProt		 PMID:10854042 GO_REF:0000107 MGI:1861161 NCBI chr 2:74,702,915...74,729,792
Ensembl chr 2:74,702,945...74,729,775 		JBrowse link
limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL3A1 collagen type III alpha 1 chain involved_in ISO (MGI:6405577|PMID:31655293) MGI PMID:31655293 MGI:6405577 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4834113|PMID:20404326) MGI
Ensembl		 PMID:20404326 GO_REF:0000107 MGI:4834113 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX4 ALX homeobox 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249)
(MGI:1314705|PMID:9847249)		 MGI
Ensembl		 PMID:9374397 PMID:9847249 GO_REF:0000107 MGI:1098911 MGI:1314705 NCBI chr 2:18,070,726...18,085,685
Ensembl chr 2:18,037,401...18,085,683 		JBrowse link
G ASPH aspartate beta-hydroxylase acts_upstream_of_or_within ISO (MGI:2177999|PMID:11773073) MGI PMID:11773073 MGI:2177999 NCBI chr 4:71,902,891...72,107,047
Ensembl chr 4:71,903,318...72,107,044 		JBrowse link
G BAK1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (MGI:1929371|PMID:11163212) MGI PMID:11163212 MGI:1929371 NCBI chr 7:29,808,849...29,815,345 JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1929371|PMID:11163212) MGI
Ensembl		 PMID:11163212 GO_REF:0000107 MGI:1929371 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,140 		JBrowse link
G CIBAR1 CBY1 interacting BAR domain containing 1 involved_in ISO (MGI:6304712|PMID:30395363)
(PMID:30395363)		 UniProt PMID:30395363 MGI:6304712 NCBI chr 4:42,957,848...42,985,482
Ensembl chr 4:42,957,712...42,985,459 		JBrowse link
G COL2A1 collagen type II alpha 1 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1334159|PMID:10100048) MGI
Ensembl		 PMID:10100048 GO_REF:0000107 MGI:1334159 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G EVX2 even-skipped homeobox 2 acts_upstream_of_or_within ISO (MGI:84613|PMID:8978698) MGI PMID:8978698 MGI:84613 NCBI chr15:81,881,362...81,884,994
Ensembl chr15:81,881,362...81,885,193 		JBrowse link
G FBN2 fibrillin 2 acts_upstream_of_or_within ISO (MGI:1353858|PMID:10700192) MGI PMID:10700192 MGI:1353858 NCBI chr 2:131,150,665...131,370,241
Ensembl chr 2:131,152,127...131,370,881 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1327513|PMID:9916808) MGI
Ensembl		 PMID:9916808 GO_REF:0000107 MGI:1327513 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (MGI:3056042|PMID:15328019)
(PMID:21873635)		 MGI
GO_Central
Ensembl		 PMID:15328019 PMID:21873635 GO_REF:0000107 MGI:3056042 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,162...112,814,248 		JBrowse link
G FLVCR1 FLVCR heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3775000|PMID:18258918) Ensembl
MGI		 PMID:18258918 GO_REF:0000107 MGI:3775000 NCBI chr 9:130,543,911...130,570,486
Ensembl chr 9:130,541,660...130,570,702 		JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1095762|PMID:9268572) MGI
Ensembl		 PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G HOXD13 homeobox D13 acts_upstream_of_or_within ISO (MGI:84613|PMID:8978698)
(MGI:2150573|PMID:11543619)		 MGI PMID:8978698 PMID:11543619 MGI:2150573 MGI:84613 NCBI chr15:81,893,997...81,897,965
Ensembl chr15:81,893,972...81,896,944 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (MGI:86916|PMID:9097952) MGI PMID:9097952 MGI:86916 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969 		JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within ISO (MGI:5635784|PMID:24009529) MGI PMID:24009529 MGI:5635784 NCBI chr 3:40,309,298...40,372,139
Ensembl chr 3:40,309,635...40,372,135 		JBrowse link
G IQCE IQ motif containing E involved_in ISO (PMID:28488682) UniProt PMID:28488682 NCBI chr 3:1,861,487...1,903,107
Ensembl chr 3:1,861,204...1,903,035 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (MGI:4461341|PMID:20589901) MGI PMID:20589901 MGI:4461341 NCBI chr 1:267,207,273...267,290,862
Ensembl chr 1:267,207,419...267,287,729 		JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3653806|PMID:15537447) MGI
Ensembl		 PMID:15537447 GO_REF:0000107 MGI:3653806 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,614...4,653,944 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3653806|PMID:15537447)
(MGI:3055483|PMID:15469977)		 MGI PMID:15469977 PMID:15537447 MGI:3055483 MGI:3653806 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISO (PMID:23063620) UniProt PMID:23063620 NCBI chr 6:49,572,905...49,619,120
Ensembl chr 6:49,577,403...49,618,921 		JBrowse link
G NFIA nuclear factor I A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:150,834,002...151,229,773
Ensembl chr 6:150,835,494...151,426,749 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in ISO (MGI:3770504|PMID:17728275) MGI PMID:17728275 MGI:3770504 NCBI chr 1:236,508,994...236,529,172
Ensembl chr 1:236,508,998...236,529,128 		JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:4438783
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:228,854,587...229,308,054
Ensembl chr 1:228,854,595...229,308,906 		JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5013998|PMID:21553379) MGI
Ensembl		 PMID:21553379 GO_REF:0000107 MGI:5013998 NCBI chr 3:98,258,456...98,268,539
Ensembl chr 3:98,258,463...98,268,553 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,425...26,703,223 		JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3716248|PMID:17558409) MGI
Ensembl		 PMID:17558409 GO_REF:0000107 MGI:3716248 NCBI chr 6:31,564,937...31,660,540
Ensembl chr 6:31,564,986...31,661,190 		JBrowse link
G SIK3 SIK family kinase 3 acts_upstream_of_or_within ISO (MGI:5316542|PMID:22318228) MGI PMID:22318228 MGI:5316542 NCBI chr 9:44,223,227...44,471,689
Ensembl chr 9:44,223,232...44,513,831 		JBrowse link
G TBX3 T-box transcription factor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2653226|PMID:12668638) MGI
Ensembl		 PMID:12668638 GO_REF:0000107 MGI:2653226 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TBX4 T-box transcription factor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3527352|PMID:15621531) MGI
Ensembl		 PMID:15621531 GO_REF:0000107 MGI:3527352 NCBI chr12:36,803,355...36,830,321
Ensembl chr12:36,802,354...36,834,327 		JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:77,856,093...77,978,194
Ensembl chr 3:77,856,138...77,975,429 		JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4413372|PMID:19795512) MGI
Ensembl		 PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
nail development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXN1 forkhead box N1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5314697|PMID:21191399) MGI
Ensembl		 PMID:21191399 GO_REF:0000107 MGI:5314697 NCBI chr12:44,764,427...44,796,138
Ensembl chr12:44,765,258...44,795,260 		JBrowse link
G HOXC13 homeobox C13 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5314697|PMID:21191399) MGI
Ensembl		 PMID:21191399 GO_REF:0000107 MGI:5314697 NCBI chr 5:19,151,096...19,159,008
Ensembl chr 5:19,151,084...19,158,646 		JBrowse link
G ITGA6 integrin subunit alpha 6 involved_in ISO (PMID:23496044) UniProt PMID:23496044 NCBI chr15:78,504,108...78,591,779
Ensembl chr15:78,504,078...78,591,777 		JBrowse link
G ITGB4 integrin subunit beta 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,651,292...5,685,601
Ensembl chr12:5,651,292...5,685,611 		JBrowse link
G PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 acts_upstream_of_or_within ISO (MGI:5779494|PMID:25340873) MGI PMID:25340873 MGI:5779494 NCBI chr14:33,201,359...33,217,641
Ensembl chr14:33,201,669...33,217,539 		JBrowse link
G RSPO4 R-spondin 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17805348) MGI
Ensembl		 PMID:17805348 GO_REF:0000107 NCBI chr17:34,268,702...34,310,073
Ensembl chr17:34,268,612...34,309,991 		JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATRX ATRX chromatin remodeler acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5568807|PMID:24386478) MGI
Ensembl		 PMID:24386478 GO_REF:0000107 MGI:5568807 NCBI chr  X:61,584,028...61,872,341
Ensembl chr  X:61,584,848...61,872,287 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (MGI:6101307|PMID:24770645) MGI PMID:24770645 MGI:6101307 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G VPS54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:77,856,093...77,978,194
Ensembl chr 3:77,856,138...77,975,429 		JBrowse link
post-embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (MGI:5585386|PMID:24722207) MGI PMID:24722207 MGI:5585386
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:5516374 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17167
    multicellular organismal process 8558
      multicellular organism development 4928
        appendage development 209
          limb development 209
            deltoid tuberosity development 3
            limb epidermis development + 2
            limb morphogenesis + 176
            nail development + 10
            pectoral fin development + 0
            pelvic fin development + 0
Path 2
Term Annotations click to browse term
  biological_process 17167
    developmental process 6482
      anatomical structure development 6104
        multicellular organism development 4928
          appendage development 209
            limb development 209
              deltoid tuberosity development 3
              limb epidermis development + 2
              limb morphogenesis + 176
              nail development + 10
              pectoral fin development + 0
              pelvic fin development + 0
paths to the root