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ONTOLOGY REPORT - ANNOTATIONS

Term:limb development
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Accession:GO:0060173 term browser browse the term
Definition:The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.
Synonyms:exact_synonym: paired limb/fin development
 narrow_synonym: limb bud development
 xref: Wikipedia:Limb_development


show annotations for term's descendants           Sort by:
limb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within IGI (MGI:5499270|PMID:23610558) MGI PMID:23610558 MGI:5499270 NCBI chr18:77,543,806...77,652,832
Ensembl chr18:77,543,806...77,652,857 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 acts_upstream_of_or_within IGI (MGI:5439233|PMID:22867887) MGI PMID:22867887 MGI:5439233 NCBI chr10:127,001,025...127,008,209
Ensembl chr10:127,001,094...127,008,199 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 (human) acts_upstream_of_or_within IGI (MGI:5314314|PMID:22228099) MGI PMID:22228099 MGI:5314314 NCBI chr 3:36,627,291...36,667,639
Ensembl chr 3:36,627,291...36,667,626 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor, type II (serine/threonine kinase) acts_upstream_of_or_within IGI (MGI:5499270|PMID:23610558) MGI PMID:23610558 MGI:5499270 NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within
involved_in		 IMP
ISO		 (MGI:5550565|PMID:22006726)
(MGI:3723532|PMID:17588960)		 MGI PMID:17588960 PMID:22006726 GO_REF:0000096 MGI:3723532 MGI:4834177 MGI:5550565 NCBI chr 8:70,826,186...70,834,721
Ensembl chr 8:70,826,208...70,834,716 		JBrowse link
G Cplane2 ciliogenesis and planar polarity effector 2 acts_upstream_of_or_within IMP (MGI:6107986|PMID:29038301) MGI PMID:29038301 MGI:6107986 NCBI chr 4:140,941,249...140,947,425
Ensembl chr 4:140,941,267...140,954,067 		JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IMP (MGI:2450015|PMID:12569130) MGI PMID:12569130 MGI:2450015 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IMP (MGI:3803396|PMID:18505822) UniProt PMID:18505822 MGI:3803396 NCBI chr19:30,523,276...30,526,896
Ensembl chr19:30,523,263...30,527,065 		JBrowse link
G Dmd dystrophin, muscular dystrophy acts_upstream_of_or_within IGI (MGI:5515277|PMID:23798567) MGI PMID:23798567 MGI:5515277 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747 		JBrowse link
G En1 engrailed 1 acts_upstream_of_or_within IMP (MGI:5502252|PMID:23863478) MGI PMID:23863478 MGI:5502252 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Fbxw4 F-box and WD-40 domain protein 4 acts_upstream_of_or_within IGI
IMP		 (MGI:76752|PMID:8666395)
(MGI:1278141|PMID:9733575), (MGI:76752|PMID:8666395)		 MGI PMID:8666395 PMID:9733575 MGI:1278141 MGI:76752 NCBI chr19:45,566,693...45,648,954
Ensembl chr19:45,566,693...45,648,751 		JBrowse link
G Fermt2 fermitin family member 2 involved_in IMP (MGI:6149626|PMID:29496737) ARUK-UCL PMID:29496737 MGI:6149626 NCBI chr14:45,696,249...45,767,767
Ensembl chr14:45,696,252...45,767,575 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (MGI:1855908|PMID:10804187)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:10804187 PMID:21873635 MGI:1855908 MGI:6201960 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within IMP (MGI:56546|PMID:2997621) MGI PMID:2997621 MGI:56546 NCBI chr 2:113,158,029...113,547,113
Ensembl chr 2:113,158,081...113,547,112 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 involved_in IMP (MGI:3710725|PMID:17400206) UniProt PMID:17400206 MGI:3710725 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (MGI:5285455|PMID:21653639)
(MGI:4420527|PMID:19521792)
(MGI:3828200|PMID:18930042)		 MGI PMID:18930042 PMID:19521792 PMID:21653639 MGI:3828200 MGI:4420527 MGI:5285455 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within IMP (MGI:5817320|PMID:26098911) MGI PMID:26098911 MGI:5817320 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,903 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IGI (MGI:5314314|PMID:22228099) MGI PMID:22228099 MGI:5314314 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Intu inturned planar cell polarity protein involved_in IMP (MGI:4441234|PMID:20067783) UniProt PMID:20067783 MGI:4441234 NCBI chr 3:40,585,559...40,659,206
Ensembl chr 3:40,585,435...40,659,204 		JBrowse link
G Irf6 interferon regulatory factor 6 acts_upstream_of_or_within IMP (MGI:3691407|PMID:17041601) MGI PMID:17041601 MGI:3691407 NCBI chr 1:192,835,420...192,854,344
Ensembl chr 1:192,835,419...192,854,331 		JBrowse link
G Kremen1 kringle containing transmembrane protein 1 involved_in IMP (MGI:3803396|PMID:18505822) UniProt PMID:18505822 MGI:3803396 NCBI chr11:5,141,551...5,212,220
Ensembl chr11:5,141,552...5,211,558 		JBrowse link
G Kremen2 kringle containing transmembrane protein 2 involved_in IMP (MGI:3803396|PMID:18505822) UniProt PMID:18505822 MGI:3803396 NCBI chr17:23,960,173...23,965,305
Ensembl chr17:23,960,171...23,964,807 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IGI (MGI:5515277|PMID:23798567) MGI PMID:23798567 MGI:5515277 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in
acts_upstream_of_or_within		 IMP
ISO		 (MGI:5771618|PMID:26755636)
(MGI:69439|PMID:7957077)		 UniProt
MGI		 PMID:7957077 PMID:26755636 GO_REF:0000096 MGI:4834177 MGI:5771618 MGI:69439 NCBI chr 2:72,115,970...72,272,954
Ensembl chr 2:72,115,981...72,272,954 		JBrowse link
G Med31 mediator complex subunit 31 acts_upstream_of_or_within IMP (MGI:4459000|PMID:20347762) MGI PMID:20347762 MGI:4459000 NCBI chr11:72,102,550...72,106,418
Ensembl chr11:72,102,550...72,106,418 		JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within IMP (MGI:1340181|PMID:10403250) MGI PMID:10403250 MGI:1340181 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533 		JBrowse link
G Mir124a-1 microRNA 124a-1 acts_upstream_of_or_within IMP (MGI:5303045|PMID:21857657) MGI PMID:21857657 MGI:5303045 NCBI chr14:64,828,106...64,828,190
Ensembl chr14:64,828,106...64,828,190 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IGI (MGI:5439233|PMID:22867887) MGI PMID:22867887 MGI:5439233 NCBI chr11:100,960,859...100,968,498
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IMP (MGI:3513731|PMID:15572448) MGI PMID:15572448 MGI:3513731 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244 		JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:9441675 RGD:2302426 NCBI chr 1:97,748,816...98,023,578
Ensembl chr 1:97,722,839...98,023,371 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (MGI:5522627|PMID:23913870) MGI PMID:23913870 MGI:5522627 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within IGI (MGI:69060|PMID:7607067) MGI PMID:7607067 MGI:69060 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Rarg retinoic acid receptor, gamma involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:3848572|PMID:19389355)
(MGI:69060|PMID:7607067)		 UniProt
MGI		 PMID:7607067 PMID:19389355 MGI:3848572 MGI:69060 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within IMP (MGI:61293|PMID:13970082) MGI PMID:13970082 MGI:61293 NCBI chr18:66,067,710...66,072,160
Ensembl chr18:66,061,348...66,072,858 		JBrowse link
G Rc3h2 ring finger and CCCH-type zinc finger domains 2 acts_upstream_of_or_within IMP (MGI:5486592|PMID:23583643) MGI PMID:23583643 MGI:5486592 NCBI chr 2:37,260,078...37,313,007
Ensembl chr 2:37,260,081...37,312,915 		JBrowse link
G Rspo2 R-spondin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP
IGI		 (MGI:3841513|PMID:19223390) MGI PMID:19223390 MGI:3841513 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Slc39a1 solute carrier family 39 (zinc transporter), member 1 acts_upstream_of_or_within IMP
IGI		 (MGI:3624433|PMID:16652366) MGI PMID:16652366 MGI:3624433 NCBI chr 3:90,155,512...90,160,923
Ensembl chr 3:90,155,479...90,160,919 		JBrowse link
G Slc39a3 solute carrier family 39 (zinc transporter), member 3 acts_upstream_of_or_within IGI (MGI:3624433|PMID:16652366) MGI PMID:16652366 MGI:3624433 NCBI chr10:80,864,374...80,873,169
Ensembl chr10:80,864,372...80,873,260 		JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (MGI:4948153|PMID:21490221) MGI PMID:21490221 MGI:4948153 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063 		JBrowse link
G Smoc1 SPARC related modular calcium binding 1 involved_in ISO
IMP		 (MGI:4939981|PMID:21194678) MGI
UniProt		 PMID:21194678 GO_REF:0000096 MGI:4834177 MGI:4939981 NCBI chr12:81,073,582...81,233,188
Ensembl chr12:81,073,582...81,233,188 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IMP (MGI:5918349|PMID:28893950) MGI PMID:28893950 MGI:5918349 NCBI chr 7:105,392,101...105,393,550
Ensembl chr 7:105,388,600...105,393,568 		JBrowse link
G Tulp3 tubby-like protein 3 acts_upstream_of_or_within IGI
IMP		 (MGI:3841513|PMID:19223390) MGI PMID:19223390 MGI:3841513 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (MGI:6141516|PMID:24141020), (MGI:6430941|PMID:32345721) MGI PMID:24141020 PMID:32345721 MGI:6141516 MGI:6430941 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 acts_upstream_of_or_within IMP (MGI:2450015|PMID:12569130) MGI PMID:12569130 MGI:2450015 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in IDA (MGI:4821073|PMID:16826533) BHF-UCL PMID:16826533 MGI:4821073 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (MGI:3581932|PMID:15967824) MGI PMID:15967824 MGI:3581932 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Bcl2l11 BCL2-like 11 (apoptosis facilitator) acts_upstream_of_or_within IGI (MGI:3581932|PMID:15967824) MGI PMID:15967824 MGI:3581932 NCBI chr 2:127,967,958...128,004,467
Ensembl chr 2:127,967,958...128,004,467 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (MGI:3608163|PMID:16245338) MGI PMID:16245338 MGI:3608163 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
deltoid tuberosity development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IMP (MGI:4418577|PMID:20059955) UniProt PMID:20059955 MGI:4418577 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 involved_in IMP
ISO		 (MGI:3794216|PMID:18312615) BHF-UCL
MGI		 PMID:18312615 GO_REF:0000096 MGI:3794216 MGI:4834177 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Scx scleraxis scleraxis bHLH transcription factor involved_in IMP (MGI:3715390|PMID:17567668), (MGI:4418577|PMID:20059955) UniProt PMID:17567668 PMID:20059955 MGI:3715390 MGI:4418577 NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658 		JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IMP
IGI		 (MGI:1095762|PMID:9268572)
(MGI:1095777|PMID:9272948)		 MGI PMID:9268572 PMID:9272948 MGI:1095762 MGI:1095777 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G B9d1 B9 protein domain 1 acts_upstream_of_or_within IMP (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chr11:61,395,970...61,403,757
Ensembl chr11:61,395,970...61,403,757 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IGI (MGI:1095762|PMID:9268572) MGI PMID:9268572 MGI:1095762 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IGI (MGI:4430000|PMID:20043884) MGI PMID:20043884 MGI:4430000 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within IMP (MGI:3799383|PMID:18539921) MGI PMID:18539921 MGI:3799383 NCBI chr 4:4,762,484...4,793,306
Ensembl chr 4:4,762,484...4,793,355 		JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (MGI:3767479|PMID:16079159) MGI PMID:16079159 MGI:3767479 NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector 1 acts_upstream_of_or_within IMP (MGI:5648689|PMID:25877302) MGI PMID:25877302 MGI:5648689 NCBI chr15:8,198,509...8,300,642
Ensembl chr15:8,198,590...8,300,642 		JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IGI
IMP		 (MGI:4430000|PMID:20043884)
(MGI:2670493|PMID:12923052)		 MGI PMID:12923052 PMID:20043884 MGI:2670493 MGI:4430000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540 		JBrowse link
G Fbxw4 F-box and WD-40 domain protein 4 acts_upstream_of_or_within IMP (MGI:1344213|PMID:10471509)
(MGI:1278141|PMID:9733575)		 MGI PMID:9733575 PMID:10471509 MGI:1278141 MGI:1344213 NCBI chr19:45,566,693...45,648,954
Ensembl chr19:45,566,693...45,648,751 		JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 acts_upstream_of_or_within IMP (MGI:3775000|PMID:18258918) MGI PMID:18258918 MGI:3775000 NCBI chr 1:190,738,029...190,758,387
Ensembl chr 1:190,738,044...190,758,355 		JBrowse link
G Frem2 Fras1 related extracellular matrix protein 2 acts_upstream_of_or_within IMP (MGI:5646594|PMID:26234751) MGI PMID:26234751 MGI:5646594 NCBI chr 3:53,421,359...53,566,014
Ensembl chr 3:53,421,359...53,564,776 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IMP (MGI:5912570|PMID:27158779)
(MGI:4367921|PMID:19877275)		 MGI PMID:19877275 PMID:27158779 MGI:4367921 MGI:5912570 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP
IGI		 (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940) MGI PMID:17504940 PMID:17504941 MGI:3710451 MGI:3710452 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (MGI:3849919|PMID:19439426) MGI PMID:19439426 MGI:3849919 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (MGI:3833793|PMID:19056373) MGI PMID:19056373 MGI:3833793 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP
IGI		 (MGI:1095762|PMID:9268572), (MGI:3692156|PMID:16254602), (MGI:3821634|PMID:19036983)
(MGI:3765370|PMID:17714700)
(MGI:5439039|PMID:22841643)		 MGI PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 MGI:1095762 MGI:3692156 MGI:3765370 MGI:3821634 MGI:5439039 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gna12 guanine nucleotide binding protein, alpha 12 acts_upstream_of_or_within IGI (MGI:2182490|PMID:12077299) MGI PMID:12077299 MGI:2182490 NCBI chr 5:140,745,699...140,816,186
Ensembl chr 5:140,744,163...140,816,186 		JBrowse link
G Gnaq guanine nucleotide binding protein, alpha q polypeptide acts_upstream_of_or_within IGI (MGI:2182490|PMID:12077299) MGI PMID:12077299 MGI:2182490 NCBI chr19:16,110,048...16,365,884
Ensembl chr19:16,110,195...16,364,827 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (MGI:4943100|PMID:21377456) MGI PMID:21377456 MGI:4943100 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IDA (MGI:2429440|PMID:12070084) MGI PMID:12070084 MGI:2429440 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in IGI (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in IGI (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr15:102,862,961...102,865,136
Ensembl chr15:102,862,862...102,866,143 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760)
(MGI:3765370|PMID:17714700)
(MGI:83869|PMID:8900279)		 MGI PMID:8900279 PMID:12869760 PMID:17714700 MGI:2667742 MGI:3765370 MGI:83869 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hoxd12 homeobox D12 acts_upstream_of_or_within IGI (MGI:83869|PMID:8900279)
(MGI:3765370|PMID:17714700)		 MGI PMID:8900279 PMID:17714700 MGI:3765370 MGI:83869 NCBI chr 2:74,505,357...74,508,049
Ensembl chr 2:74,505,357...74,508,049 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IGI (MGI:1097490|PMID:9342042)
(MGI:3765370|PMID:17714700)
(MGI:83869|PMID:8900279)		 MGI PMID:8900279 PMID:9342042 PMID:17714700 MGI:1097490 MGI:3765370 MGI:83869 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within IMP (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within IMP (MGI:3579954|PMID:15930098) MGI PMID:15930098 MGI:3579954 NCBI chr 2:162,859,200...162,888,075
Ensembl chr 2:162,859,274...162,888,061 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP
IGI		 (MGI:3821634|PMID:19036983)
(MGI:3579954|PMID:15930098)
(MGI:2660994|PMID:12701101), (MGI:3692156|PMID:16254602)
(MGI:3577662|PMID:15755804), (MGI:3579954|PMID:15930098)		 MGI PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 MGI:2660994 MGI:3577662 MGI:3579954 MGI:3692156 MGI:3821634 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within
involved_in		 IMP
IGI
ISO		 (MGI:4822496|PMID:20660756) MGI PMID:20660756 GO_REF:0000096 MGI:4822496 MGI:4834177 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Intu inturned planar cell polarity protein acts_upstream_of_or_within
involved_in		 IMP
ISO		 (MGI:5644615|PMID:25774014) MGI PMID:25774014 GO_REF:0000096 MGI:4834177 MGI:5644615 NCBI chr 3:40,585,559...40,659,206
Ensembl chr 3:40,585,435...40,659,204 		JBrowse link
G Lmbr1 limb region 1 acts_upstream_of_or_within IMP (MGI:2151954|PMID:11606546) MGI PMID:11606546 MGI:2151954 NCBI chr 5:29,434,800...29,583,414
Ensembl chr 5:29,434,800...29,583,388 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within IGI (MGI:1097490|PMID:9342042) MGI PMID:9342042 MGI:1097490 NCBI chr 2:74,345,180...74,409,802
Ensembl chr 2:74,350,635...74,409,779 		JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 acts_upstream_of_or_within IMP (MGI:3623169|PMID:16517118) MGI PMID:16517118 MGI:3623169 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IGI (MGI:3045836|PMID:15142971) MGI PMID:15142971 MGI:3045836 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP
IGI		 (MGI:4413372|PMID:19795512)
(MGI:3045836|PMID:15142971)		 MGI PMID:15142971 PMID:19795512 MGI:3045836 MGI:4413372 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (MGI:5771618|PMID:26755636) MGI PMID:26755636 GO_REF:0000096 MGI:4834177 MGI:5771618 NCBI chr 2:72,115,970...72,272,954
Ensembl chr 2:72,115,981...72,272,954 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IMP (MGI:4367169|PMID:19776033)
(MGI:4868517|PMID:21045211)
(MGI:5487695|PMID:23454480)		 MGI PMID:19776033 PMID:21045211 PMID:23454480 MGI:4367169 MGI:4868517 MGI:5487695 NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of_or_within IMP (MGI:3790402|PMID:17360777) MGI PMID:17360777 MGI:3790402 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915 		JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (MGI:5522627|PMID:23913870) MGI PMID:23913870 MGI:5522627 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Rab23 RAB23, member RAS oncogene family acts_upstream_of_or_within IMP (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804) MGI PMID:9636176 PMID:15755804 MGI:1267118 MGI:3577662 NCBI chr 1:33,758,959...33,781,645
Ensembl chr 1:33,758,968...33,781,645 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within IGI
IMP		 (MGI:4822496|PMID:20660756) MGI PMID:20660756 MGI:4822496 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in ISO
IMP		 (MGI:4461128|PMID:18470945) MGI
UniProt		 PMID:18470945 GO_REF:0000096 MGI:4461128 MGI:4834177 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within IMP (MGI:3806414|PMID:18729207) MGI PMID:18729207 MGI:3806414 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
G Shh sonic hedgehog involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:5559673|PMID:11044396)
(MGI:3039193|PMID:15075292), (MGI:4822496|PMID:20660756)
(MGI:3579954|PMID:15930098)
(MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940)		 Roslin_Institute
MGI		 PMID:11044396 PMID:15075292 PMID:15930098 PMID:17504940 PMID:17504941 More... MGI:3039193 MGI:3579954 MGI:3710451 MGI:3710452 MGI:4822496 MGI:5559673 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (MGI:5444318|PMID:23034633) CACAO PMID:23034633 MGI:5444318 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within IMP (MGI:4439200|PMID:20159594) MGI PMID:20159594 MGI:4439200 NCBI chr10:55,890,389...56,106,495
Ensembl chr10:55,890,389...56,104,785 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within
involved_in		 IMP
ISO		 (MGI:5532232|PMID:23844108)
(MGI:5776065|PMID:27046536)		 MGI PMID:23844108 PMID:27046536 GO_REF:0000096 MGI:4834177 MGI:5532232 MGI:5776065 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tmem107 transmembrane protein 107 involved_in IMP (MGI:5432629|PMID:22698544) UniProt PMID:22698544 MGI:5432629 NCBI chr11:68,961,635...68,964,119
Ensembl chr11:68,961,632...68,964,119 		JBrowse link
G Tmem231 transmembrane protein 231 acts_upstream_of_or_within IMP (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chr 8:112,638,639...112,660,445
Ensembl chr 8:112,638,643...112,660,513 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within IMP (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chr 1:91,422,311...91,457,029
Ensembl chr 1:91,422,369...91,457,029 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within IMP (MGI:5493390|PMID:23141541) MGI PMID:23141541 MGI:5493390 NCBI chr 2:120,563,297...120,681,111
Ensembl chr 2:120,563,297...120,681,085 		JBrowse link
G Tulp3 tubby-like protein 3 acts_upstream_of_or_within IMP (MGI:3841503|PMID:19286674), (MGI:3844764|PMID:19334287) MGI PMID:19286674 PMID:19334287 MGI:3841503 MGI:3844764 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (MGI:3042355|PMID:15030764) MGI PMID:15030764 MGI:3042355 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 ISO
IMP		 (MGI:5544506|PMID:24302887) MGI PMID:24302887 GO_REF:0000096 MGI:4834177 MGI:5544506 NCBI chr11:21,521,969...21,848,686
Ensembl chr11:21,522,235...21,848,989 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISO RGD
MGI		 PMID:19191224 GO_REF:0000096 MGI:4417868 RGD:2312786 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (MGI:3046038|PMID:15069081), (MGI:4422129|PMID:20034106) MGI PMID:15069081 PMID:20034106 MGI:3046038 MGI:4422129 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Alx3 aristaless-like homeobox 3 acts_upstream_of_or_within IGI (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr 3:107,502,347...107,513,191
Ensembl chr 3:107,502,347...107,513,092 		JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851 		JBrowse link
G Crabp2 cellular retinoic acid binding protein II acts_upstream_of_or_within IMP (MGI:71462|PMID:7720575) MGI PMID:7720575 MGI:71462 NCBI chr 3:87,856,000...87,860,679
Ensembl chr 3:87,855,973...87,860,683 		JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IDA (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G En1 engrailed 1 acts_upstream_of_or_within IGI (MGI:1194987|PMID:9362463) MGI PMID:9362463 MGI:1194987 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within IMP (MGI:3530958|PMID:15733672) MGI PMID:15733672 MGI:3530958 NCBI chr 6:52,235,833...52,237,865
Ensembl chr 6:52,234,674...52,237,788 		JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within IGI (MGI:78984|PMID:8625797) MGI PMID:8625797 MGI:78984 NCBI chr 6:52,200,077...52,203,169
Ensembl chr 6:52,200,080...52,208,069 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI
IMP		 (MGI:78984|PMID:8625797) MGI PMID:8625797 MGI:78984 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within IMP (MGI:1097490|PMID:9342042)
(MGI:5462316|PMID:22916278)		 MGI PMID:9342042 PMID:22916278 MGI:1097490 MGI:5462316 NCBI chr 2:74,345,180...74,409,802
Ensembl chr 2:74,350,635...74,409,779 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP
IGI		 (MGI:1891551|PMID:11029008)
(MGI:4413396|PMID:19653321)
(MGI:3578068|PMID:15880584)
(MGI:3774879|PMID:18256198)		 MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 MGI:1891551 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within IMP (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI
IEP		 (MGI:4950000|PMID:21262216)
(MGI:2149941|PMID:11520675)		 BHF-UCL
UniProt		 PMID:11520675 PMID:21262216 MGI:2149941 MGI:4950000 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:3709664 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs acts_upstream_of_or_within IMP (MGI:5424521|PMID:23213437) MGI PMID:23213437 MGI:5424521 NCBI chr 4:43,875,521...43,944,806
Ensembl chr 4:43,875,530...43,944,806 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (MGI:3715393|PMID:17553904) MGI PMID:17553904 MGI:3715393 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within IMP
IGI		 (MGI:3774879|PMID:18256198) MGI PMID:18256198 MGI:3774879 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IMP (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:1928592|PMID:11118883), (MGI:2149276|PMID:11476582) MGI PMID:11118883 PMID:11476582 MGI:1928592 MGI:2149276 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within IMP (MGI:5462316|PMID:22916278) MGI PMID:22916278 MGI:5462316 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Tbx3 T-box 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx5 T-box 5 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (MGI:2150876|PMID:11572777), (MGI:2448173|PMID:12490567) MGI PMID:11572777 PMID:12490567 GO_REF:0000096 MGI:2150876 MGI:2448173 MGI:4834177 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in IMP (MGI:1313057|PMID:9811866) UniProt PMID:9811866 MGI:1313057 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (MGI:5824492|PMID:25503409) MGI PMID:25503409 MGI:5824492 NCBI chr16:25,502,513...25,710,838
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (MGI:2180404|PMID:12175489) MGI PMID:12175489 MGI:2180404 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 acts_upstream_of_or_within IMP (MGI:2450015|PMID:12569130) MGI PMID:12569130 MGI:2450015 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within
involved_in		 IMP
IGI
ISO		 (MGI:1194987|PMID:9362463)
(MGI:3578068|PMID:15880584)		 MGI PMID:9362463 PMID:15880584 GO_REF:0000096 MGI:1194987 MGI:3578068 MGI:4834177 MGI:48652 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Wnt9a wingless-type MMTV integration site family, member 9A acts_upstream_of_or_within IDA (MGI:3055626|PMID:15371327) MGI PMID:15371327 MGI:3055626 NCBI chr11:59,197,675...59,224,378
Ensembl chr11:59,197,754...59,224,378 		JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff3 AF4/FMR2 family, member 3 involved_in ISO
IEP		 (MGI:3819916|PMID:18616733) MGI
BHF-UCL		 PMID:18616733 GO_REF:0000096 MGI:3819916 MGI:4834177 NCBI chr 1:38,212,936...38,704,036
Ensembl chr 1:38,216,407...38,704,036 		JBrowse link
G Alx3 aristaless-like homeobox 3 acts_upstream_of_or_within IGI (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr 3:107,502,347...107,513,191
Ensembl chr 3:107,502,347...107,513,092 		JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI (MGI:2151109|PMID:11641221) MGI PMID:11641221 MGI:2151109 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IGI (MGI:1889107|PMID:10964473) MGI PMID:10964473 MGI:1889107 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (MGI:3611161|PMID:16207732) MGI PMID:16207732 MGI:3611161 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 acts_upstream_of_or_within IMP (MGI:2670493|PMID:12923052)
(MGI:3773938|PMID:18231602)		 MGI PMID:12923052 PMID:18231602 MGI:2670493 MGI:3773938 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (MGI:3609457|PMID:16319892) MGI PMID:16319892 MGI:3609457 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IGI (MGI:3608165|PMID:16245339) MGI PMID:16245339 MGI:3608165 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (MGI:3608165|PMID:16245339) MGI PMID:16245339 MGI:3608165 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gnas GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus acts_upstream_of_or_within IMP (MGI:3619837|PMID:15797856) MGI PMID:15797856 MGI:3619837 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within IGI (MGI:1889107|PMID:10964473) MGI PMID:10964473 MGI:1889107 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Lmbr1 limb region 1 acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 5:29,434,800...29,583,414
Ensembl chr 5:29,434,800...29,583,388 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI
IMP		 (MGI:3578068|PMID:15880584)
(MGI:4413396|PMID:19653321)
(MGI:3774879|PMID:18256198)		 MGI PMID:15880584 PMID:18256198 PMID:19653321 MGI:3578068 MGI:3774879 MGI:4413396 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within IMP (MGI:3686680|PMID:17029558) MGI PMID:17029558 MGI:3686680 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (MGI:2682174|PMID:14500757) MGI PMID:14500757 MGI:2682174 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:11850435 RGD:1582550 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (MGI:3608163|PMID:16245338) MGI PMID:16245338 MGI:3608163 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI
IEP		 (MGI:4950000|PMID:21262216)
(MGI:2149941|PMID:11520675)		 BHF-UCL
UniProt		 PMID:11520675 PMID:21262216 MGI:2149941 MGI:4950000 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 acts_upstream_of_or_within
involved_in		 IGI
IMP		 (MGI:3773938|PMID:18231602)
(MGI:5299938|PMID:22071103)		 MGI
CACAO		 PMID:18231602 PMID:22071103 MGI:3773938 MGI:5299938 NCBI chr13:55,972,857...55,984,002
Ensembl chr13:55,972,864...55,984,005 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IGI (MGI:3773938|PMID:18231602) MGI PMID:18231602 MGI:3773938 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IGI (MGI:1334064|PMID:10075839) MGI PMID:10075839 MGI:1334064 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IGI (MGI:1334064|PMID:10075839) MGI PMID:10075839 MGI:1334064 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (MGI:3715393|PMID:17553904) MGI PMID:17553904 MGI:3715393 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within IGI
IMP		 (MGI:3774879|PMID:18256198) MGI PMID:18256198 MGI:3774879 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:1928592|PMID:11118883) MGI PMID:11118883 MGI:1928592 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (MGI:3604915|PMID:16192310) MGI PMID:16192310 MGI:3604915 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (MGI:5532232|PMID:23844108) MGI PMID:23844108 MGI:5532232 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx4 T-box 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (MGI:5824492|PMID:25503409) MGI PMID:25503409 MGI:5824492 NCBI chr16:25,502,513...25,710,838
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in IMP (MGI:1100098|PMID:8988167) BHF-UCL PMID:8988167 MGI:1100098 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 acts_upstream_of_or_within IMP (MGI:2450015|PMID:12569130) MGI PMID:12569130 MGI:2450015 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within
involved_in		 IGI
ISO		 (MGI:3578068|PMID:15880584) MGI PMID:15880584 GO_REF:0000096 MGI:3578068 MGI:4834177 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within
involved_in		 IMP
ISO		 (MGI:1859075|PMID:10835630) MGI
RGD		 PMID:10835630 PMID:19191224 GO_REF:0000096 MGI:1859075 MGI:4417868 RGD:2312786 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd adrenocortical dysplasia acts_upstream_of_or_within IMP (MGI:3526782|PMID:15537664) MGI PMID:15537664 MGI:3526782 NCBI chr 8:106,424,789...106,427,748
Ensembl chr 8:106,422,492...106,427,734 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (MGI:2681052|PMID:14623241) MGI PMID:14623241 MGI:2681052 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within IGI (MGI:1314705|PMID:9847249) MGI PMID:9847249 MGI:1314705 NCBI chr10:102,843,708...102,865,501
Ensembl chr10:102,834,568...102,866,076 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP
IGI		 (MGI:1270933|PMID:9664686) MGI PMID:9664686 MGI:1270933 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP
IGI		 (MGI:1270933|PMID:9664686) MGI PMID:9664686 MGI:1270933 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (MGI:3767479|PMID:16079159) MGI PMID:16079159 MGI:3767479 NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within IMP (MGI:3037623|PMID:15030763) MGI PMID:15030763 MGI:3037623 NCBI chr 6:84,548,396...84,570,890
Ensembl chr 6:84,548,396...84,570,890 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (MGI:3588609|PMID:16040801) MGI PMID:16040801 MGI:3588609 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within IGI (MGI:3052394|PMID:15242796) MGI PMID:15242796 MGI:3052394 NCBI chr19:30,523,276...30,526,896
Ensembl chr19:30,523,263...30,527,065 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within IGI (MGI:3794467|PMID:18326838)
(MGI:2181241|PMID:12112878)		 MGI PMID:12112878 PMID:18326838 MGI:2181241 MGI:3794467 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within IGI (MGI:2181241|PMID:12112878)
(MGI:3794467|PMID:18326838)		 MGI PMID:12112878 PMID:18326838 MGI:2181241 MGI:3794467 NCBI chr 6:6,863,334...6,867,970
Ensembl chr 6:6,863,334...6,868,568 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within IMP (MGI:3610248|PMID:16229832) MGI PMID:16229832 MGI:3610248 NCBI chr 9:6,928,550...7,177,619
Ensembl chr 9:6,928,503...7,184,446 		JBrowse link
G En1 engrailed 1 acts_upstream_of_or_within
involved_in		 IMP
IGI		 (MGI:81767|PMID:8684466)
(MGI:3052394|PMID:15242796)
(MGI:75252|PMID:7624797)		 MGI
ParkinsonsUK-UCL		 PMID:7624797 PMID:8684466 PMID:15242796 MGI:3052394 MGI:75252 MGI:81767 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721 		JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within IMP (MGI:1934650|PMID:11350121)
(MGI:1933664|PMID:11285249)		 MGI PMID:11285249 PMID:11350121 MGI:1933664 MGI:1934650 NCBI chr18:58,141,689...58,343,200
Ensembl chr18:58,141,695...58,343,559 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IGI (MGI:3056042|PMID:15328019) MGI PMID:15328019 MGI:3056042 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within IMP (MGI:3714711|PMID:17576930) MGI PMID:17576930 MGI:3714711 NCBI chr14:58,308,131...58,350,311
Ensembl chr14:58,308,004...58,350,177 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (MGI:3608262|PMID:16207751) MGI PMID:16207751 MGI:3608262 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within IMP (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chr 5:96,518,622...96,932,592
Ensembl chr 5:96,521,814...96,932,587 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (MGI:3513212|PMID:15542031) MGI PMID:15542031 MGI:3513212 NCBI chr 2:155,782,943...155,787,204
Ensembl chr 2:155,782,943...155,787,287 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (MGI:3581374|PMID:15923624) MGI PMID:15923624 MGI:3581374 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI
IMP		 (MGI:3608261|PMID:16284117)
(MGI:2384366|PMID:12142027), (MGI:2445242|PMID:12435361), (MGI:2445270|PMID:12435627), (MGI:4367286|PMID:19809516), (MGI:52587|PMID:8387379)
(MGI:3851667|PMID:19422820)		 MGI PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... MGI:2384366 MGI:2445242 MGI:2445270 MGI:3608261 MGI:3851667 MGI:4367286 MGI:52587 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within IMP (MGI:2665160|PMID:12808456) MGI PMID:12808456 MGI:2665160 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within IGI (MGI:1334099|PMID:10090727) MGI PMID:10090727 MGI:1334099 NCBI chr 5:115,087,039...115,109,121
Ensembl chr 5:115,087,039...115,109,153 		JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr 6:52,208,177...52,217,658
Ensembl chr 6:52,208,177...52,217,834 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:3043491 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxc10 homeobox C10 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr15:102,875,231...102,880,333
Ensembl chr15:102,875,231...102,880,328 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (MGI:3043491|PMID:14668414) MGI PMID:14668414 MGI:3043491 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IMP (MGI:2177382|PMID:11850178) MGI PMID:11850178 MGI:2177382 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IGI (MGI:1334099|PMID:10090727) MGI PMID:10090727 MGI:1334099 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta involved_in NAS (MGI:3687803|PMID:10767331) UniProt PMID:10767331 MGI:3687803 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 acts_upstream_of_or_within IMP (MGI:3619629|PMID:16207730)
(MGI:3703100|PMID:17119023)		 MGI PMID:16207730 PMID:17119023 MGI:3619629 MGI:3703100 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (MGI:4458999|PMID:20359476) MGI PMID:20359476 MGI:4458999 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 involved_in IEP (MGI:2675975|PMID:12915312) UniProt PMID:12915312 MGI:2675975 NCBI chr 3:60,380,209...60,537,171
Ensembl chr 3:60,380,251...60,537,171 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (MGI:3851667|PMID:19422820)
(MGI:3580732|PMID:15930102)		 MGI PMID:15930102 PMID:19422820 MGI:3580732 MGI:3851667 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:3580732|PMID:15930102)
(MGI:3851667|PMID:19422820)		 MGI PMID:15930102 PMID:19422820 MGI:3580732 MGI:3851667 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 ISO RGD PMID:14718386 RGD:1302424 NCBI chr14:30,601,214...30,603,567
Ensembl chr14:30,601,157...30,603,567 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IGI (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch2 notch 2 acts_upstream_of_or_within IGI (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 acts_upstream_of_or_within IGI (MGI:3629247|PMID:16672333) MGI PMID:16672333 MGI:3629247 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Pbx2 pre B cell leukemia homeobox 2 acts_upstream_of_or_within IGI (MGI:3629247|PMID:16672333) MGI PMID:16672333 MGI:3629247 NCBI chr17:34,811,233...34,816,374
Ensembl chr17:34,810,240...34,816,374 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (MGI:5522627|PMID:23913870) MGI PMID:23913870 MGI:5522627 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IGI (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI PMID:9729491 PMID:9882503 MGI:1306737 MGI:1328643 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) MGI PMID:9729491 PMID:9882503 MGI:1306737 MGI:1328643 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within IGI (MGI:3610505|PMID:16169548) MGI PMID:16169548 MGI:3610505 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP
IGI		 (MGI:2152606|PMID:11784021)
(MGI:2135419|PMID:11389830)		 MGI PMID:11389830 PMID:11784021 MGI:2135419 MGI:2152606 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within IMP
IGI		 (MGI:3614736|PMID:16380715) MGI PMID:16380715 MGI:3614736 NCBI chr 2:168,590,252...168,609,121
Ensembl chr 2:168,590,252...168,609,863 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IGI
IMP		 (MGI:3851667|PMID:19422820)
(MGI:3053241|PMID:15315763)
(MGI:2135419|PMID:11389830)		 MGI PMID:11389830 PMID:15315763 PMID:19422820 MGI:2135419 MGI:3053241 MGI:3851667 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within IMP (MGI:3621617|PMID:16537395)
(MGI:3714677|PMID:17481601)		 MGI PMID:16537395 PMID:17481601 MGI:3621617 MGI:3714677 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (MGI:2445270|PMID:12435627) MGI PMID:12435627 MGI:2445270 NCBI chr 4:155,238,532...155,306,992
Ensembl chr 4:155,238,532...155,307,049 		JBrowse link
G Sp8 trans-acting transcription factor 8 acts_upstream_of_or_within
involved_in		 IMP (MGI:2679409|PMID:14597661)
(MGI:3526745|PMID:15358670)		 MGI
UniProt		 PMID:14597661 PMID:15358670 MGI:2679409 MGI:3526745 NCBI chr12:118,809,968...118,816,313
Ensembl chr12:118,810,064...118,816,311 		JBrowse link
G Sp9 trans-acting transcription factor 9 involved_in IMP (MGI:3526745|PMID:15358670) UniProt PMID:15358670 MGI:3526745 NCBI chr 2:73,094,809...73,106,115
Ensembl chr 2:73,102,269...73,115,050 		JBrowse link
G Tbx4 T-box 4 acts_upstream_of_or_within IMP (MGI:2660720|PMID:12736212) MGI PMID:12736212 MGI:2660720 NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within
involved_in		 IMP
IGI
ISO		 (MGI:2660722|PMID:12736217)
(MGI:3614736|PMID:16380715)		 MGI PMID:12736217 PMID:16380715 GO_REF:0000096 MGI:2660722 MGI:3614736 MGI:4834177 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP
IGI		 (MGI:1335634|PMID:10227293)
(MGI:3794467|PMID:18326838)		 MGI PMID:10227293 PMID:18326838 MGI:1335634 MGI:3794467 NCBI chr16:25,502,513...25,710,838
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (MGI:2384366|PMID:12142027)
(MGI:1934650|PMID:11350121)
(MGI:3042355|PMID:15030764)		 MGI PMID:11350121 PMID:12142027 PMID:15030764 MGI:1934650 MGI:2384366 MGI:3042355 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within IMP (MGI:5314316|PMID:22228095) MGI PMID:22228095 MGI:5314316 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (MGI:1329804|PMID:10021340) MGI PMID:10021340 MGI:1329804 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IGI (MGI:3052394|PMID:15242796) MGI PMID:15242796 MGI:3052394 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP MGI MGI:61278 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within IMP (MGI:5499279|PMID:23439395) MGI PMID:23439395 MGI:5499279 NCBI chr15:38,869,673...38,901,587
Ensembl chr15:38,869,429...38,901,583 		JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 ISO
IMP
IGI		 (MGI:3688967|PMID:11369996)
(MGI:4948979|PMID:21465616)		 MGI
BHF-UCL		 PMID:11369996 PMID:21465616 GO_REF:0000096 MGI:3688967 MGI:4834177 MGI:4948979 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (MGI:5522627|PMID:23913870) MGI PMID:23913870 MGI:5522627 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin (cadherin associated protein), beta 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C acts_upstream_of_or_within IMP (MGI:5499270|PMID:23610558) MGI PMID:23610558 MGI:5499270 NCBI chr18:77,543,806...77,652,832
Ensembl chr18:77,543,806...77,652,857 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within IMP (MGI:3717025|PMID:17554679) MGI PMID:17554679 MGI:3717025 NCBI chr 2:113,158,029...113,547,113
Ensembl chr 2:113,158,081...113,547,112 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (MGI:65616|PMID:8145850) MGI PMID:8145850 MGI:65616 NCBI chr 2:155,782,943...155,787,204
Ensembl chr 2:155,782,943...155,787,287 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IGI (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within IGI (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr18:81,010,204...81,030,236
Ensembl chr18:81,009,591...81,029,986 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within ISO (MGI:1346580|PMID:9207801) MGI PMID:9207801 MGI:1346580 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within ISO
IMP		 (MGI:84816|PMID:8988164), (MGI:84817|PMID:8988165)
(MGI:3527352|PMID:15621531)		 MGI PMID:8988164 PMID:8988165 PMID:15621531 MGI:3527352 MGI:84816 MGI:84817 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (MGI:1313057|PMID:9811866) MGI PMID:9811866 MGI:1313057 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IMP (MGI:5287515|PMID:21829553) UniProt PMID:21829553 MGI:5287515 NCBI chr 1:19,279,132...19,309,071
Ensembl chr 1:19,279,138...19,308,800 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IMP MGI MGI:48652 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP (MGI:1859075|PMID:10835630) MGI PMID:10835630 MGI:1859075 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP MGI MGI:61157 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (MGI:3621084|PMID:16556916) MGI PMID:16556916 MGI:3621084 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within IMP (MGI:3717025|PMID:17554679) MGI PMID:17554679 MGI:3717025 NCBI chr 2:113,158,029...113,547,113
Ensembl chr 2:113,158,081...113,547,112 		JBrowse link
G Gdf5 growth differentiation factor 5 acts_upstream_of_or_within IMP (MGI:65616|PMID:8145850)
(MGI:3722565|PMID:17085896)		 MGI PMID:8145850 PMID:17085896 MGI:3722565 MGI:65616 NCBI chr 2:155,782,943...155,787,204
Ensembl chr 2:155,782,943...155,787,287 		JBrowse link
G Hotair HOX transcript antisense RNA (non-protein coding) acts_upstream_of_or_within
involved_in		 IMP (MGI:5788088|PMID:25909911) MGI PMID:25909911 MGI:5788088 NCBI chr15:102,852,497...102,856,381
Ensembl chr15:102,852,494...102,856,165 		JBrowse link
G Hottip Hoxa distal transcript antisense RNA acts_upstream_of_or_within
involved_in		 IMP (MGI:5788088|PMID:25909911) MGI PMID:25909911 MGI:5788088 NCBI chr 6:52,239,760...52,244,588
Ensembl chr 6:52,239,760...52,244,588 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within IGI (MGI:1350864|PMID:10642795) MGI PMID:10642795 MGI:1350864 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Pitx1 paired-like homeodomain transcription factor 1 acts_upstream_of_or_within IDA
IMP		 (MGI:3527352|PMID:15621531), (MGI:3689784|PMID:16989801)
(MGI:1332284|PMID:10049363)
(MGI:1333095|PMID:10101115)		 MGI PMID:10049363 PMID:10101115 PMID:15621531 PMID:16989801 MGI:1332284 MGI:1333095 MGI:3527352 MGI:3689784 NCBI chr13:55,972,857...55,984,002
Ensembl chr13:55,972,864...55,984,005 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP (MGI:1095757|PMID:9262482) MGI PMID:9262482 MGI:1095757 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IGI (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Sall3 spalt like transcription factor 3 acts_upstream_of_or_within IGI (MGI:3829797|PMID:19168674) MGI PMID:19168674 MGI:3829797 NCBI chr18:81,010,204...81,030,236
Ensembl chr18:81,009,591...81,029,986 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in IMP (MGI:5287515|PMID:21829553) UniProt PMID:21829553 MGI:5287515 NCBI chr 1:19,279,132...19,309,071
Ensembl chr 1:19,279,138...19,308,800 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (MGI:1353858|PMID:10700192) MGI PMID:10700192 MGI:1353858 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IMP MGI MGI:48652 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within IMP (MGI:1859075|PMID:10835630) MGI PMID:10835630 MGI:1859075 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
limb bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen, type II, alpha 1 involved_in IEP (MGI:5285147|PMID:20940257) UniProt PMID:20940257 MGI:5285147 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (MGI:1309706|PMID:9784490) MGI PMID:9784490 MGI:1309706 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (MGI:1197797|PMID:9435295)
(MGI:1346744|PMID:10518547)		 MGI PMID:9435295 PMID:10518547 MGI:1197797 MGI:1346744 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Plxna2 plexin A2 involved_in IEP (MGI:4355631|PMID:19666519) BHF-UCL PMID:19666519 MGI:4355631 NCBI chr 1:194,302,020...194,499,177
Ensembl chr 1:194,300,526...194,499,177 		JBrowse link
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C involved_in IEP (MGI:4355631|PMID:19666519) BHF-UCL PMID:19666519 MGI:4355631 NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:1928592|PMID:11118883) MGI PMID:11118883 MGI:1928592 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IEP (MGI:5285147|PMID:20940257) UniProt PMID:20940257 MGI:5285147 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Zfp219 zinc finger protein 219 involved_in IEP (MGI:5285147|PMID:20940257) UniProt PMID:20940257 MGI:5285147 NCBI chr14:52,243,532...52,258,597
Ensembl chr14:52,243,534...52,258,190 		JBrowse link
limb epidermis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdf1 keratinocyte differentiation factor 1 involved_in IMP (MGI:5529391|PMID:24075906) UniProt PMID:24075906 MGI:5529391 NCBI chr 4:133,246,274...133,258,101
Ensembl chr 4:133,246,274...133,258,101 		JBrowse link
G Pias4 protein inhibitor of activated STAT 4 acts_upstream_of_or_within IEP (MGI:1861161|PMID:10854042) UniProt PMID:10854042 MGI:1861161 NCBI chr10:80,989,795...81,003,554
Ensembl chr10:80,989,100...81,003,757 		JBrowse link
limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen, type III, alpha 1 involved_in IMP (MGI:6405577|PMID:31655293) MGI PMID:31655293 MGI:6405577 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (MGI:4834113|PMID:20404326) MGI PMID:20404326 MGI:4834113 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI
IMP		 (MGI:1314705|PMID:9847249)
(MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249)		 MGI PMID:9374397 PMID:9847249 MGI:1098911 MGI:1314705 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within IMP (MGI:2177999|PMID:11773073) MGI PMID:11773073 MGI:2177999 NCBI chr 4:9,449,085...9,669,344
Ensembl chr 4:9,448,069...9,669,344 		JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within IGI (MGI:1929371|PMID:11163212) MGI PMID:11163212 MGI:1929371 NCBI chr17:27,238,786...27,247,601
Ensembl chr17:27,238,784...27,247,983 		JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (MGI:1929371|PMID:11163212) MGI PMID:11163212 MGI:1929371 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 involved_in IMP
ISO		 (MGI:6304712|PMID:30395363) UniProt
MGI		 PMID:30395363 GO_REF:0000096 MGI:4834177 MGI:6304712 NCBI chr 4:12,153,142...12,172,047
Ensembl chr 4:12,153,409...12,172,015 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (MGI:1334159|PMID:10100048) MGI PMID:10100048 MGI:1334159 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Evx2 even-skipped homeobox 2 acts_upstream_of_or_within IGI
IMP		 (MGI:84613|PMID:8978698) MGI PMID:8978698 MGI:84613 NCBI chr 2:74,483,333...74,491,864
Ensembl chr 2:74,483,335...74,489,901 		JBrowse link
G Fbn2 fibrillin 2 acts_upstream_of_or_within IMP (MGI:1353858|PMID:10700192) MGI PMID:10700192 MGI:1353858 NCBI chr18:58,141,689...58,343,200
Ensembl chr18:58,141,695...58,343,559 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (MGI:1327513|PMID:9916808) MGI PMID:9916808 MGI:1327513 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (MGI:3056042|PMID:15328019)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:15328019 PMID:21873635 MGI:3056042 MGI:6201960 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 acts_upstream_of_or_within IMP (MGI:3775000|PMID:18258918) MGI PMID:18258918 MGI:3775000 NCBI chr 1:190,738,029...190,758,387
Ensembl chr 1:190,738,044...190,758,355 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within
involved_in		 IMP
ISO		 (MGI:1095762|PMID:9268572) MGI PMID:9268572 GO_REF:0000096 MGI:1095762 MGI:4834177 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IMP
IGI		 (MGI:2150573|PMID:11543619)
(MGI:84613|PMID:8978698)		 MGI PMID:8978698 PMID:11543619 MGI:2150573 MGI:84613 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Idua iduronidase, alpha-L acts_upstream_of_or_within IMP (MGI:86916|PMID:9097952) MGI PMID:9097952 MGI:86916 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (MGI:5635784|PMID:24009529) MGI PMID:24009529 MGI:5635784 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Iqce IQ motif containing E involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:140,648,308...140,688,158
Ensembl chr 5:140,647,582...140,688,133 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within IMP (MGI:4461341|PMID:20589901) MGI PMID:20589901 MGI:4461341 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IGI (MGI:3653806|PMID:15537447) MGI PMID:15537447 MGI:3653806 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP
IGI		 (MGI:3055483|PMID:15469977)
(MGI:3653806|PMID:15537447)		 MGI PMID:15469977 PMID:15537447 MGI:3055483 MGI:3653806 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Nfia nuclear factor I/A involved_in IMP (MGI:6110918|PMID:29247144) MGI PMID:29247144 MGI:6110918 NCBI chr 4:97,469,534...98,007,113
Ensembl chr 4:97,660,971...98,007,111 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IMP (MGI:3770504|PMID:17728275) MGI PMID:17728275 MGI:3770504 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244 		JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (MGI:4438783|PMID:20096683) MGI PMID:20096683 MGI:4438783 NCBI chr10:76,187,088...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in IMP (MGI:3795695|PMID:18519639) BHF-UCL PMID:18519639 MGI:3795695 NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic acts_upstream_of_or_within IMP (MGI:5013998|PMID:21553379) MGI PMID:21553379 MGI:5013998 NCBI chr17:83,522,708...83,532,496
Ensembl chr17:83,522,721...83,532,499 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (MGI:5586584|PMID:25190059) MGI PMID:25190059 MGI:5586584 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Ptch1 patched 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within IMP (MGI:3716248|PMID:17558409) MGI PMID:17558409 MGI:3716248 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within IMP (MGI:5316542|PMID:22318228) MGI PMID:22318228 MGI:5316542 NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within
involved_in		 IMP (MGI:2653226|PMID:12668638)
(MGI:5776065|PMID:27046536)		 MGI PMID:12668638 PMID:27046536 MGI:2653226 MGI:5776065 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx4 T-box 4 involved_in
acts_upstream_of_or_within		 ISS
ISO
IDA		 (MGI:3696504|PMID:10945475)
(MGI:3527352|PMID:15621531)		 UniProt
MGI		 PMID:10945475 PMID:15621531 GO_REF:0000096 MGI:3527352 MGI:3696504 MGI:4834177 NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923 		JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (MGI:6141516|PMID:24141020) MGI PMID:24141020 MGI:6141516 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IGI (MGI:5314312|PMID:22234993) MGI PMID:22234993 MGI:5314312 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
nail development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn1 forkhead box N1 acts_upstream_of_or_within IMP (MGI:5314697|PMID:21191399) MGI PMID:21191399 MGI:5314697 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384 		JBrowse link
G Hoxc13 homeobox C13 acts_upstream_of_or_within IMP (MGI:5314697|PMID:21191399) MGI PMID:21191399 MGI:5314697 NCBI chr15:102,829,566...102,837,249
Ensembl chr15:102,829,538...102,837,249 		JBrowse link
G Itga6 integrin alpha 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:71,617,236...71,688,761
Ensembl chr 2:71,575,960...71,688,760 		JBrowse link
G Itgb4 integrin beta 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:115,865,556...115,899,238
Ensembl chr11:115,865,535...115,899,238 		JBrowse link
G Prkab1 protein kinase, AMP-activated, beta 1 non-catalytic subunit acts_upstream_of_or_within IMP (MGI:5779494|PMID:25340873) MGI PMID:25340873 MGI:5779494 NCBI chr 5:116,151,654...116,162,449
Ensembl chr 5:116,151,645...116,162,567 		JBrowse link
G Rspo4 R-spondin 4 acts_upstream_of_or_within ISO (MGI:3793978|PMID:17805348) MGI PMID:17805348 MGI:3793978 NCBI chr 2:151,684,571...151,716,588
Ensembl chr 2:151,684,847...151,716,588 		JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler acts_upstream_of_or_within IMP (MGI:5568807|PMID:24386478) MGI PMID:24386478 MGI:5568807 NCBI chr  X:104,841,221...104,972,978
Ensembl chr  X:104,841,221...104,973,009 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (MGI:6101307|PMID:24770645) MGI PMID:24770645 MGI:6101307 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Vps54 VPS54 GARP complex subunit involved_in IMP (MGI:3622894|PMID:11403940) MGI PMID:11403940 MGI:3622894 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136 		JBrowse link
post-embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IDA (MGI:5585386|PMID:24722207) MGI PMID:24722207 MGI:5585386 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within IDA (MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:5516374 NCBI chr 8:84,935,147...84,935,221
Ensembl chr 8:84,935,147...84,935,221 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28775
    multicellular organismal process 9341
      multicellular organism development 5369
        appendage development 214
          limb development 214
            deltoid tuberosity development 3
            limb epidermis development + 2
            limb morphogenesis + 180
            nail development + 10
            pectoral fin development + 0
            pelvic fin development + 0
Path 2
Term Annotations click to browse term
  biological_process 28775
    developmental process 7273
      anatomical structure development 6756
        multicellular organism development 5369
          appendage development 214
            limb development 214
              deltoid tuberosity development 3
              limb epidermis development + 2
              limb morphogenesis + 180
              nail development + 10
              pectoral fin development + 0
              pelvic fin development + 0
paths to the root