Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:ciliary membrane
go back to main search page
Accession:GO:0060170 term browser browse the term
Definition:The portion of the plasma membrane surrounding a cilium.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: cilial membrane;   cilium membrane
 narrow_synonym: flagellar membrane;   flagellum membrane
 alt_id: GO:0020017

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
ciliary membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:7,250,194...7,333,433
Ensembl chrNW_004936493:7,250,194...7,335,691 		JBrowse link
G Arl13a ARF like GTPase 13A located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936813:66,944...80,346 JBrowse link
G Arl13b ARF like GTPase 13B located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936666:115,964...179,639
Ensembl chrNW_004936666:116,264...177,989 		JBrowse link
G Arl6 ARF like GTPase 6 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936666:3,077,006...3,102,469
Ensembl chrNW_004936666:3,076,778...3,103,649 		JBrowse link
G Bbip1 BBSome interacting protein 1 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004936486:1,707,367...1,723,481 JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 located_in
part_of		 IEA
ISO		 (PMID:19081074) Ensembl
ComplexPortal		 PMID:19081074 GO_REF:0000107 NCBI chrNW_004936599:3,059,274...3,076,853
Ensembl chrNW_004936599:3,059,148...3,076,299 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in
part_of		 IEA
ISO		 (PMID:19081074) UniProt
ComplexPortal
Ensembl		 PMID:19081074 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936475:8,785,914...8,810,490
Ensembl chrNW_004936475:8,785,154...8,810,541 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in
part_of		 IEA
ISO		 (PMID:19081074) Ensembl
ComplexPortal		 PMID:19081074 GO_REF:0000107 NCBI chrNW_004936471:31,962,500...32,019,516
Ensembl chrNW_004936471:31,962,336...32,020,712 		JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 located_in
part_of		 IEA
ISO		 (PMID:19081074) UniProt
ComplexPortal
Ensembl		 PMID:19081074 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936509:25,263...45,113
Ensembl chrNW_004936509:25,602...45,145 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in
part_of		 IEA
ISO		 (PMID:19081074) Ensembl
ComplexPortal		 PMID:19081074 GO_REF:0000107 NCBI chrNW_004936662:1,081,237...1,116,719
Ensembl chrNW_004936662:1,080,295...1,116,636 		JBrowse link
G Bbs9 Bardet-Biedl syndrome 9 located_in
part_of		 IEA
ISO		 (PMID:19081074) Ensembl
ComplexPortal		 PMID:19081074 GO_REF:0000107 NCBI chrNW_004936478:8,959,198...9,408,683
Ensembl chrNW_004936478:8,959,121...9,408,714 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase located_in ISO PMID:18596612 BHF-UCL PMID:18596612 RGD:8554451 NCBI chrNW_004936502:7,933,312...8,281,492
Ensembl chrNW_004936502:7,937,146...8,281,492 		JBrowse link
G Cltb clathrin light chain B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:665,365...689,867
Ensembl chrNW_004936597:662,725...689,873 		JBrowse link
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936714:1,011,736...1,017,722
Ensembl chrNW_004936714:1,011,736...1,017,729 		JBrowse link
G Drd1 dopamine receptor D1 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613 		JBrowse link
G Drd2 dopamine receptor D2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798 		JBrowse link
G Drd5 dopamine receptor D5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:16,860,222...16,863,505
Ensembl chrNW_004936477:16,861,773...16,863,215 		JBrowse link
G Efcab7 EF-hand calcium binding domain 7 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936692:1,091,872...1,137,426
Ensembl chrNW_004936692:1,091,613...1,137,671 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 located_in ISO (PMID:20427320) MGI PMID:20427320 NCBI chrNW_004936522:9,438,929...9,486,781 JBrowse link
G Evc EvC ciliary complex subunit 1 located_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:17,940,792...17,992,996
Ensembl chrNW_004936477:17,937,677...17,993,727 		JBrowse link
G Evc2 EvC ciliary complex subunit 2 located_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:17,835,479...17,938,014
Ensembl chrNW_004936477:17,837,964...17,937,975 		JBrowse link
G Gpi glucose-6-phosphate isomerase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:1,582,120...1,608,537
Ensembl chrNW_004936570:1,579,372...1,608,788 		JBrowse link
G Gpr157 G protein-coupled receptor 157 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,264,409...3,281,857
Ensembl chrNW_004936623:3,264,403...3,281,931 		JBrowse link
G Gpr88 G protein-coupled receptor 88 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936748:657,876...662,831
Ensembl chrNW_004936748:657,587...662,769 		JBrowse link
G Iqce IQ motif containing E located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936823:340,959...389,593 JBrowse link
G LOC101954488 CEA cell adhesion molecule 1 located_in ISO (PMID:22179047) MGI PMID:22179047 NCBI chrNW_004936706:37,480...53,306 JBrowse link
G LOC101968601 signal transducer CD24 located_in ISO (PMID:11978835) MGI PMID:11978835 NCBI chrNW_004936491:16,706,745...16,707,010 JBrowse link
G LOC101978074 uncharacterized protein C16orf52 homolog B-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936486:9,029,017...9,029,633 JBrowse link
G Mchr1 melanin concentrating hormone receptor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:1,153,895...1,156,980
Ensembl chrNW_004936492:1,153,651...1,157,142 		JBrowse link
G Mosmo modulator of smoothened located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936501:6,981,331...7,047,046 JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting located_in ISO (PMID:38247840) UniProt PMID:38247840 NCBI chrNW_004936478:22,255,887...22,389,477
Ensembl chrNW_004936478:22,262,017...22,347,643 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:4,385,788...4,403,393
Ensembl chrNW_004936596:4,385,772...4,403,441 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:1,377,852...1,403,398
Ensembl chrNW_004936709:1,377,831...1,403,833 		JBrowse link
G Septin2 septin 2 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936745:518,650...555,187
Ensembl chrNW_004936745:518,391...546,953 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 part_of
located_in		 ISO PMID:18596612 CACAO
BHF-UCL		 PMID:18596612 RGD:8554451 NCBI chrNW_004936599:196,512...463,749
Ensembl chrNW_004936599:217,138...463,771 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 located_in
part_of		 ISO PMID:18596612 BHF-UCL
CACAO		 PMID:18596612 RGD:8554451 NCBI chrNW_004936629:114,175...168,697
Ensembl chrNW_004936629:114,850...167,505 		JBrowse link
G Smo smoothened, frizzled class receptor located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281 		JBrowse link
G Snap29 synaptosome associated protein 29 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936619:2,377,284...2,402,049
Ensembl chrNW_004936619:2,376,815...2,401,967 		JBrowse link
G Sstr3 somatostatin receptor 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,745,455...3,752,330
Ensembl chrNW_004936492:3,748,135...3,751,089 		JBrowse link
G Tmem17 transmembrane protein 17 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936491:7,721,150...7,726,983
Ensembl chrNW_004936491:7,719,658...7,727,107 		JBrowse link
G Tmem231 transmembrane protein 231 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:24,215,817...24,232,689
Ensembl chrNW_004936475:24,215,659...24,232,947 		JBrowse link
G Tmem67 transmembrane protein 67 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:6,887,867...6,931,669
Ensembl chrNW_004936544:6,887,532...6,932,179 		JBrowse link
G Tspear thrombospondin type laminin G domain and EAR repeats located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936778:1,576,580...1,660,344
Ensembl chrNW_004936778:1,478,617...1,660,331 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 located_in
part_of		 IEA
ISO		 (PMID:19081074) Ensembl
ComplexPortal		 PMID:19081074 GO_REF:0000107 NCBI chrNW_004936488:16,258,247...16,306,077
Ensembl chrNW_004936488:16,258,058...16,306,589 		JBrowse link
G Umod uromodulin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936501:5,833,391...5,846,021
Ensembl chrNW_004936501:5,833,391...5,846,164 		JBrowse link
ciliary necklace term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 ISO MMO:0000538 RGD PMID:7861185 RGD:407570624 NCBI chrNW_004936493:7,250,194...7,333,433
Ensembl chrNW_004936493:7,250,194...7,335,691 		JBrowse link
G Gnal G protein subunit alpha L ISO MMO:0000538 RGD PMID:7861185 RGD:407570624 NCBI chrNW_004936626:372,893...460,884
Ensembl chrNW_004936626:373,433...460,788 		JBrowse link
ciliary pocket membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd1 EH domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,451,207...4,473,078
Ensembl chrNW_004936599:4,450,188...4,473,738 		JBrowse link
G Ehd3 EH domain containing 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,864,836...1,896,079
Ensembl chrNW_004936493:1,864,755...1,896,097 		JBrowse link
G Snap29 synaptosome associated protein 29 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:2,377,284...2,402,049
Ensembl chrNW_004936619:2,376,815...2,401,967 		JBrowse link
non-motile cilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936714:1,011,736...1,017,722
Ensembl chrNW_004936714:1,011,736...1,017,729 		JBrowse link
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:310,741...314,754
Ensembl chrNW_004936842:310,741...314,754 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISO PMID:10377344 UniProt PMID:10377344 RGD:632392 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin related family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936767:805,910...829,838
Ensembl chrNW_004936767:805,558...827,712 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:14,091,343...14,107,793
Ensembl chrNW_004936482:14,091,913...14,107,787 		JBrowse link
G Gnb1 G protein subunit beta 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004936737:1,518,855...1,554,926
Ensembl chrNW_004936737:1,524,325...1,555,102 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,235,747...1,250,294
Ensembl chrNW_004936595:1,235,711...1,250,354 		JBrowse link
G Pde6g phosphodiesterase 6G located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:5,263,345...5,267,240
Ensembl chrNW_004936594:5,263,333...5,267,476 		JBrowse link
G Pde6h phosphodiesterase 6H located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936587:2,505,755...2,514,103
Ensembl chrNW_004936587:2,506,585...2,514,157 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 ISO RGD PMID:20089132 RGD:5131540 NCBI chrNW_004936475:22,074,620...22,138,308
Ensembl chrNW_004936475:22,074,568...22,138,334 		JBrowse link
G Prcd photoreceptor disc component located_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:1,615,165...1,628,455
Ensembl chrNW_004936594:1,616,794...1,619,049 		JBrowse link
G Prom1 prominin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:11,878,261...12,017,228
Ensembl chrNW_004936477:11,878,012...12,018,177 		JBrowse link
G Prph peripherin located_in ISO (PMID:10414956) MGI PMID:10414956 NCBI chrNW_004936512:7,046,275...7,050,958
Ensembl chrNW_004936512:7,047,253...7,051,007 		JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT|located_in ISO (PMID:15790565) MGI PMID:15790565 NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044 		JBrowse link
G Rho rhodopsin located_in ISO
IEA		 RGD
Ensembl		 PMID:2209754 GO_REF:0000107 RGD:6893561 NCBI chrNW_004936602:896,730...901,480
Ensembl chrNW_004936602:894,617...901,664 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:642,322...644,286
Ensembl chrNW_004936581:641,753...644,637 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16781
    cellular anatomical structure 16693
      membrane 8241
        organelle membrane 2816
          bounding membrane of organelle 1543
            ciliary membrane 64
              ciliary necklace 2
              ciliary pocket membrane 3
              cone photoreceptor disc membrane 0
              non-motile cilium membrane 3
              photoreceptor outer segment membrane 13
Path 2
Term Annotations click to browse term
  cellular_component 16781
    cellular anatomical structure 16693
      cell periphery 5454
        plasma membrane 5029
          plasma membrane region 1379
            cell projection membrane 342
              ciliary membrane 64
                ciliary necklace 2
                ciliary pocket membrane 3
                cone photoreceptor disc membrane 0
                non-motile cilium membrane 3
                photoreceptor outer segment membrane 13
paths to the root