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ONTOLOGY REPORT - ANNOTATIONS

Term:ciliary membrane
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Accession:GO:0060170 term browser browse the term
Definition:The portion of the plasma membrane surrounding a cilium.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: cilial membrane;   cilium membrane
 narrow_synonym: flagellar membrane;   flagellum membrane
 alt_id: GO:0020017

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ciliary membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 located_in ISO (PMID:28053034) ARUK-UCL PMID:28053034 NCBI chrNW_004624738:7,163,189...7,249,249
Ensembl chrNW_004624738:7,163,354...7,249,190 		JBrowse link
G Arl13b ARF like GTPase 13B located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:6,710,858...6,783,097
Ensembl chrNW_004624789:6,710,681...6,783,667 		JBrowse link
G Arl6 ARF like GTPase 6 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624789:10,223,339...10,252,889
Ensembl chrNW_004624789:10,229,793...10,254,364 		JBrowse link
G Bbip1 BBSome interacting protein 1 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004624737:35,401,223...35,413,228
Ensembl chrNW_004624737:35,401,932...35,414,093 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004624767:19,875,597...19,893,652
Ensembl chrNW_004624767:19,875,535...19,893,694 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in
part_of		 IEA
ISO		 (PMID:19081074) UniProt
ComplexPortal
Ensembl		 PMID:19081074 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624757:55,861...88,703
Ensembl chrNW_004624757:55,811...88,562 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 part_of
located_in		 ISO (PMID:19081074)
(PMID:17574030)		 ComplexPortal
BHF-UCL		 PMID:17574030 PMID:19081074 NCBI chrNW_004624781:1,502,069...1,553,101
Ensembl chrNW_004624781:1,503,816...1,538,755 		JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 located_in
part_of		 IEA
ISO		 (PMID:19081074) UniProt
ComplexPortal		 PMID:19081074 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624787:7,045,509...7,062,575
Ensembl chrNW_004624787:7,045,492...7,062,347 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004624777:2,105,122...2,151,399
Ensembl chrNW_004624777:2,104,765...2,151,402 		JBrowse link
G Bbs9 Bardet-Biedl syndrome 9 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004624988:50,083...209,821 JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase located_in ISO PMID:18596612 BHF-UCL PMID:18596612 RGD:8554451 NCBI chrNW_004624762:13,723,347...14,106,844
Ensembl chrNW_004624762:13,722,691...14,106,844 		JBrowse link
G Cd24 CD24 molecule located_in ISO (PMID:11978835) MGI PMID:11978835 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292 		JBrowse link
G Cltb clathrin light chain B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:13,707,594...13,738,814
Ensembl chrNW_004624733:13,707,155...13,738,814 		JBrowse link
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624883:3,043,661...3,051,420
Ensembl chrNW_004624883:3,043,666...3,049,801 		JBrowse link
G Drd1 dopamine receptor D1 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905 		JBrowse link
G Drd2 dopamine receptor D2 located_in ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529 		JBrowse link
G Drd5 dopamine receptor D5 located_in ISO (PMID:20531939) SYSCILIA_CCNET PMID:20531939 NCBI chrNW_004624755:21,358,586...21,361,410 JBrowse link
G Efcab7 EF-hand calcium binding domain 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:30,607,384...30,639,187
Ensembl chrNW_004624742:30,605,865...30,637,383 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 located_in ISO (PMID:20427320) MGI PMID:20427320 NCBI chrNW_004624859:1,584,024...1,754,395 JBrowse link
G Evc EvC ciliary complex subunit 1 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624755:22,432,174...22,478,595
Ensembl chrNW_004624755:22,437,167...22,478,591 		JBrowse link
G Evc2 EvC ciliary complex subunit 2 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624755:22,326,321...22,429,141
Ensembl chrNW_004624755:22,331,117...22,428,873 		JBrowse link
G Gpi glucose-6-phosphate isomerase located_in ISO (PMID:22179047) MGI PMID:22179047 NCBI chrNW_004624794:8,826,281...8,851,614
Ensembl chrNW_004624794:8,823,449...8,851,625 		JBrowse link
G Gpr157 G protein-coupled receptor 157 located_in ISO (PMID:27142930) UniProt PMID:27142930 NCBI chrNW_004624818:3,109,457...3,123,819
Ensembl chrNW_004624818:3,109,407...3,123,912 		JBrowse link
G Gpr88 G protein-coupled receptor 88 located_in ISO (PMID:23936473) UniProt PMID:23936473 NCBI chrNW_004624857:3,435,286...3,440,746
Ensembl chrNW_004624857:3,435,952...3,440,055 		JBrowse link
G Iqce IQ motif containing E located_in ISO (PMID:24582806) UniProt PMID:24582806 NCBI chrNW_004624740:30,299,266...30,348,572 JBrowse link
G LOC101704678 uncharacterized protein C16orf52 homolog B-like located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:20,536,426...20,540,703 JBrowse link
G Mchr1 melanin concentrating hormone receptor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:7,801,867...7,805,791
Ensembl chrNW_004624752:7,801,948...7,805,635 		JBrowse link
G Mosmo modulator of smoothened located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:7,455,770...7,513,931 JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting located_in ISO (PMID:38247840) UniProt PMID:38247840 NCBI chrNW_004624740:5,619,253...5,703,032 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in ISO (PMID:29038301) MGI PMID:29038301 NCBI chrNW_004624908:1,119,356...1,132,029
Ensembl chrNW_004624908:1,116,610...1,132,111 		JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha located_in ISO (PMID:22207244) UniProt PMID:22207244 NCBI chrNW_004624860:3,123,676...3,152,217
Ensembl chrNW_004624860:3,126,379...3,145,043 		JBrowse link
G Septin2 septin 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624847:5,341,177...5,382,920
Ensembl chrNW_004624847:5,341,467...5,385,065 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 part_of
located_in		 ISO PMID:18596612 CACAO
BHF-UCL		 PMID:18596612 RGD:8554451 NCBI chrNW_004624767:16,296,053...16,828,714
Ensembl chrNW_004624767:16,380,751...16,823,577 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 located_in
part_of		 ISO PMID:18596612 BHF-UCL
CACAO		 PMID:18596612 RGD:8554451 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325 		JBrowse link
G Smo smoothened, frizzled class receptor located_in ISO (PMID:22179047) MGI PMID:22179047 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921 		JBrowse link
G Snap29 synaptosome associated protein 29 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624945:799,831...837,720
Ensembl chrNW_004624945:801,833...837,564 		JBrowse link
G Sstr3 somatostatin receptor 3 located_in ISO (PMID:22179047) MGI PMID:22179047 NCBI chrNW_004624752:10,623,360...10,626,759
Ensembl chrNW_004624752:10,619,078...10,626,754 		JBrowse link
G Tmem17 transmembrane protein 17 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004624762:10,970,048...10,975,736
Ensembl chrNW_004624762:10,969,765...10,976,870 		JBrowse link
G Tmem231 transmembrane protein 231 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624746:11,411,050...11,427,945
Ensembl chrNW_004624746:11,411,107...11,427,943 		JBrowse link
G Tmem67 transmembrane protein 67 located_in ISO (PMID:17185389) UniProt PMID:17185389 NCBI chrNW_004624763:1,219,779...1,281,297
Ensembl chrNW_004624763:1,219,827...1,264,071 		JBrowse link
G Tspear thrombospondin type laminin G domain and EAR repeats located_in ISO (PMID:22678063) MGI PMID:22678063 NCBI chrNW_004624745:30,186,498...30,232,200
Ensembl chrNW_004624745:30,183,218...30,232,182 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 part_of ISO (PMID:19081074) ComplexPortal PMID:19081074 NCBI chrNW_004624734:13,437,234...13,497,269
Ensembl chrNW_004624734:13,437,221...13,497,510 		JBrowse link
G Umod uromodulin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624782:3,639,955...3,654,026
Ensembl chrNW_004624782:3,640,214...3,652,324 		JBrowse link
ciliary necklace term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy3 adenylate cyclase 3 ISO MMO:0000538 RGD PMID:7861185 RGD:407570624 NCBI chrNW_004624738:7,163,189...7,249,249
Ensembl chrNW_004624738:7,163,354...7,249,190 		JBrowse link
G Gnal G protein subunit alpha L ISO MMO:0000538 RGD PMID:7861185 RGD:407570624 NCBI chrNW_004624770:19,433,614...19,504,759
Ensembl chrNW_004624770:19,433,660...19,504,698 		JBrowse link
ciliary pocket membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ehd1 EH domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:21,522,871...21,543,925
Ensembl chrNW_004624767:21,522,750...21,544,133 		JBrowse link
G Ehd3 EH domain containing 3 located_in ISO (PMID:25686250) UniProt PMID:25686250 NCBI chrNW_004624738:13,033,491...13,062,795
Ensembl chrNW_004624738:13,032,604...13,062,795 		JBrowse link
G Snap29 synaptosome associated protein 29 located_in ISO (PMID:25686250) UniProt PMID:25686250 NCBI chrNW_004624945:799,831...837,720
Ensembl chrNW_004624945:801,833...837,564 		JBrowse link
non-motile cilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 located_in ISO PMID:10377344
(PMID:16980309)		 UniProt PMID:10377344 PMID:16980309 RGD:632392 NCBI chrNW_004624883:3,043,661...3,051,420
Ensembl chrNW_004624883:3,043,666...3,049,801 		JBrowse link
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 located_in ISO PMID:10377344
(PMID:16980309)		 UniProt PMID:10377344 PMID:16980309 RGD:632392 NCBI chrNW_004624817:7,716,951...7,732,177
Ensembl chrNW_004624817:7,719,332...7,737,336 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISO PMID:10377344 UniProt PMID:10377344 RGD:632392 NCBI chrNW_004624746:28,198,324...28,268,280 JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin related family member 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004624841:2,820,543...2,838,998
Ensembl chrNW_004624841:2,820,546...2,839,005 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004624761:18,992,372...19,004,247
Ensembl chrNW_004624761:18,992,384...19,004,202 		JBrowse link
G Gnb1 G protein subunit beta 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004624818:7,937,061...8,002,798
Ensembl chrNW_004624818:7,936,932...8,003,433 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal located_in ISO PMID:9153227
(PMID:21598940)		 UniProt PMID:9153227 PMID:21598940 RGD:1599625 NCBI chrNW_004624786:10,574,252...10,589,303
Ensembl chrNW_004624786:10,574,968...10,588,540 		JBrowse link
G Pde6g phosphodiesterase 6G located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:10,597,722...10,602,784
Ensembl chrNW_004624801:10,597,860...10,601,811 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 ISO RGD PMID:20089132 RGD:5131540 NCBI chrNW_004624746:13,917,070...13,994,212
Ensembl chrNW_004624746:13,919,557...13,994,182 		JBrowse link
G Prcd photoreceptor disc component located_in ISO (PMID:27613864)
(PMID:27509380), (PMID:27613864)		 UniProt PMID:27509380 PMID:27613864 NCBI chrNW_004624801:6,398,044...6,409,985
Ensembl chrNW_004624801:6,398,103...6,408,024 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004624755:15,765,162...15,886,023
Ensembl chrNW_004624755:15,771,286...15,886,348 		JBrowse link
G Prph peripherin located_in ISO (PMID:10414956) MGI PMID:10414956 NCBI chrNW_004624816:2,873,689...2,877,335
Ensembl chrNW_004624816:2,873,690...2,877,238 		JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT|located_in ISO (PMID:15790565) MGI PMID:15790565 NCBI chrNW_004624734:33,283,336...33,295,797
Ensembl chrNW_004624734:33,283,497...33,295,091 		JBrowse link
G Rho rhodopsin located_in ISO (PMID:19934218) RGD
UniProt		 PMID:2209754 PMID:19934218 RGD:6893561 NCBI chrNW_004624872:523,892...528,278
Ensembl chrNW_004624872:523,912...527,615 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004624926:1,140,082...1,142,434
Ensembl chrNW_004624926:1,140,793...1,142,253 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15780
    cellular anatomical structure 15657
      membrane 7605
        organelle membrane 2657
          bounding membrane of organelle 1470
            ciliary membrane 61
              ciliary necklace 2
              ciliary pocket membrane 3
              cone photoreceptor disc membrane 0
              non-motile cilium membrane 3
              photoreceptor outer segment membrane 12
Path 2
Term Annotations click to browse term
  cellular_component 15780
    cellular anatomical structure 15657
      cell periphery 5120
        plasma membrane 4721
          plasma membrane region 1344
            cell projection membrane 332
              ciliary membrane 61
                ciliary necklace 2
                ciliary pocket membrane 3
                cone photoreceptor disc membrane 0
                non-motile cilium membrane 3
                photoreceptor outer segment membrane 12
paths to the root